Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene62016.t1 | RHN81411.1 | 64.2 | 758 | 162 | 2 | 13 | 697 | 35 | 756 | 1.90E-275 | 958.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene62016.t1 | Q9SY66 | 50.1 | 501 | 242 | 5 | 73 | 572 | 60 | 553 | 1.8e-141 | 504.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene62016.t1 | A0A396JX52 | 64.2 | 758 | 162 | 2 | 13 | 697 | 35 | 756 | 1.3e-275 | 958.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene62016.t1 | TF | FAR1 |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050026 | MS.gene62016 | 0.808893 | 2.48E-50 | -1.69E-46 |
MS.gene050750 | MS.gene62016 | 0.818625 | 1.78E-52 | -1.69E-46 |
MS.gene050953 | MS.gene62016 | 0.80964 | 1.71E-50 | -1.69E-46 |
MS.gene052447 | MS.gene62016 | 0.81072 | 1.00E-50 | -1.69E-46 |
MS.gene05329 | MS.gene62016 | 0.80006 | 1.72E-48 | -1.69E-46 |
MS.gene05415 | MS.gene62016 | 0.818264 | 2.15E-52 | -1.69E-46 |
MS.gene054405 | MS.gene62016 | 0.800622 | 1.32E-48 | -1.69E-46 |
MS.gene060572 | MS.gene62016 | 0.800592 | 1.34E-48 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene62016.t1 | MTR_3g450850 | 69.373 | 271 | 82 | 1 | 31 | 300 | 16 | 286 | 2.58e-131 | 392 |
MS.gene62016.t1 | MTR_4g035820 | 37.736 | 318 | 174 | 6 | 60 | 370 | 74 | 374 | 4.31e-52 | 192 |
MS.gene62016.t1 | MTR_4g035820 | 33.659 | 205 | 108 | 3 | 449 | 653 | 326 | 502 | 7.46e-22 | 100 |
MS.gene62016.t1 | MTR_3g012160 | 83.696 | 92 | 15 | 0 | 210 | 301 | 2 | 93 | 1.34e-46 | 160 |
MS.gene62016.t1 | MTR_4g071400 | 96.203 | 79 | 3 | 0 | 574 | 652 | 43 | 121 | 1.29e-43 | 153 |
MS.gene62016.t1 | MTR_1g070355 | 32.540 | 252 | 150 | 7 | 61 | 306 | 72 | 309 | 7.79e-29 | 122 |
MS.gene62016.t1 | MTR_6g051425 | 27.208 | 283 | 194 | 5 | 62 | 341 | 18 | 291 | 5.38e-27 | 113 |
MS.gene62016.t1 | MTR_5g076070 | 27.917 | 240 | 157 | 7 | 64 | 300 | 56 | 282 | 2.53e-23 | 100 |
MS.gene62016.t1 | MTR_3g095940 | 74.074 | 54 | 14 | 0 | 514 | 567 | 90 | 143 | 3.60e-20 | 88.2 |
MS.gene62016.t1 | MTR_5g083630 | 57.143 | 70 | 24 | 1 | 204 | 267 | 7 | 76 | 7.24e-18 | 80.1 |
MS.gene62016.t1 | MTR_6g014355 | 37.013 | 154 | 81 | 5 | 142 | 287 | 14 | 159 | 9.77e-17 | 80.9 |
MS.gene62016.t1 | MTR_6g022080 | 30.909 | 165 | 97 | 6 | 72 | 232 | 96 | 247 | 4.90e-14 | 73.2 |
MS.gene62016.t1 | MTR_0558s0020 | 24.715 | 263 | 175 | 7 | 66 | 312 | 41 | 296 | 6.18e-14 | 73.6 |
MS.gene62016.t1 | MTR_8g446020 | 26.178 | 191 | 131 | 4 | 126 | 312 | 72 | 256 | 1.72e-12 | 68.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene62016.t1 | AT1G10240 | 48.000 | 550 | 272 | 7 | 30 | 572 | 11 | 553 | 0.0 | 533 |
MS.gene62016.t1 | AT1G10240 | 48.000 | 550 | 272 | 7 | 30 | 572 | 11 | 553 | 0.0 | 533 |
MS.gene62016.t1 | AT5G28530 | 42.545 | 550 | 291 | 4 | 31 | 570 | 27 | 561 | 8.97e-160 | 477 |
MS.gene62016.t1 | AT5G28530 | 42.545 | 550 | 291 | 4 | 31 | 570 | 27 | 561 | 8.97e-160 | 477 |
MS.gene62016.t1 | AT5G28530 | 42.364 | 550 | 296 | 4 | 31 | 570 | 27 | 565 | 4.16e-159 | 475 |
MS.gene62016.t1 | AT5G28530 | 38.148 | 540 | 266 | 7 | 31 | 570 | 27 | 498 | 1.07e-124 | 384 |
MS.gene62016.t1 | AT5G28530 | 37.963 | 540 | 271 | 7 | 31 | 570 | 27 | 502 | 4.99e-124 | 382 |
MS.gene62016.t1 | AT4G38180 | 30.255 | 509 | 341 | 6 | 61 | 566 | 73 | 570 | 2.95e-68 | 239 |
MS.gene62016.t1 | AT4G15090 | 30.408 | 490 | 319 | 10 | 61 | 544 | 51 | 524 | 1.04e-67 | 238 |
MS.gene62016.t1 | AT4G15090 | 30.408 | 490 | 319 | 10 | 61 | 544 | 51 | 524 | 1.04e-67 | 238 |
MS.gene62016.t1 | AT4G15090 | 30.408 | 490 | 319 | 10 | 61 | 544 | 51 | 524 | 1.04e-67 | 238 |
MS.gene62016.t1 | AT4G15090 | 30.408 | 490 | 319 | 10 | 61 | 544 | 51 | 524 | 1.04e-67 | 238 |
MS.gene62016.t1 | AT4G15090 | 30.408 | 490 | 319 | 10 | 61 | 544 | 51 | 524 | 1.04e-67 | 238 |
MS.gene62016.t1 | AT3G22170 | 27.734 | 512 | 321 | 16 | 49 | 544 | 55 | 533 | 5.01e-54 | 199 |
MS.gene62016.t1 | AT3G22170 | 27.734 | 512 | 321 | 16 | 49 | 544 | 55 | 533 | 5.01e-54 | 199 |
MS.gene62016.t1 | AT1G76320 | 27.869 | 488 | 313 | 12 | 67 | 544 | 3 | 461 | 8.83e-52 | 191 |
MS.gene62016.t1 | AT1G76320 | 27.869 | 488 | 313 | 12 | 67 | 544 | 3 | 461 | 9.45e-52 | 192 |
MS.gene62016.t1 | AT1G76320 | 27.869 | 488 | 313 | 12 | 67 | 544 | 3 | 461 | 1.01e-51 | 192 |
MS.gene62016.t1 | AT1G76320 | 27.869 | 488 | 313 | 12 | 67 | 544 | 3 | 461 | 1.01e-51 | 192 |
MS.gene62016.t1 | AT3G06250 | 25.800 | 500 | 306 | 12 | 61 | 555 | 190 | 629 | 5.68e-46 | 175 |
MS.gene62016.t1 | AT3G06250 | 25.800 | 500 | 306 | 12 | 61 | 555 | 190 | 629 | 5.68e-46 | 175 |
MS.gene62016.t1 | AT3G06250 | 25.800 | 500 | 306 | 12 | 61 | 555 | 190 | 629 | 5.68e-46 | 175 |
MS.gene62016.t1 | AT5G18960 | 25.725 | 517 | 316 | 12 | 47 | 555 | 197 | 653 | 1.81e-45 | 174 |
MS.gene62016.t1 | AT5G18960 | 25.725 | 517 | 316 | 12 | 47 | 555 | 197 | 653 | 1.81e-45 | 174 |
MS.gene62016.t1 | AT2G27110 | 25.514 | 486 | 319 | 12 | 61 | 544 | 49 | 493 | 3.54e-40 | 158 |
MS.gene62016.t1 | AT2G27110 | 25.514 | 486 | 319 | 12 | 61 | 544 | 49 | 493 | 3.54e-40 | 158 |
MS.gene62016.t1 | AT2G32250 | 27.586 | 290 | 208 | 2 | 256 | 544 | 180 | 468 | 2.71e-39 | 155 |
MS.gene62016.t1 | AT2G32250 | 27.586 | 290 | 208 | 2 | 256 | 544 | 139 | 427 | 3.80e-39 | 155 |
MS.gene62016.t1 | AT2G32250 | 27.586 | 290 | 208 | 2 | 256 | 544 | 180 | 468 | 3.98e-39 | 155 |
MS.gene62016.t1 | AT2G32250 | 27.586 | 290 | 208 | 2 | 256 | 544 | 180 | 468 | 3.98e-39 | 155 |
MS.gene62016.t1 | AT2G32250 | 27.586 | 290 | 208 | 2 | 256 | 544 | 180 | 468 | 3.98e-39 | 155 |
MS.gene62016.t1 | AT2G32250 | 27.586 | 290 | 208 | 2 | 256 | 544 | 139 | 427 | 4.01e-39 | 155 |
MS.gene62016.t1 | AT2G32250 | 27.586 | 290 | 208 | 2 | 256 | 544 | 180 | 468 | 4.21e-39 | 155 |
MS.gene62016.t1 | AT2G32250 | 27.586 | 290 | 208 | 2 | 256 | 544 | 180 | 468 | 4.21e-39 | 155 |
MS.gene62016.t1 | AT4G19990 | 26.441 | 503 | 296 | 14 | 63 | 544 | 23 | 472 | 9.61e-38 | 150 |
MS.gene62016.t1 | AT4G19990 | 26.441 | 503 | 296 | 14 | 63 | 544 | 23 | 472 | 1.02e-37 | 150 |
MS.gene62016.t1 | AT4G19990 | 26.441 | 503 | 296 | 14 | 63 | 544 | 23 | 472 | 1.02e-37 | 150 |
MS.gene62016.t1 | AT4G19990 | 26.441 | 503 | 296 | 14 | 63 | 544 | 37 | 486 | 1.41e-37 | 150 |
MS.gene62016.t1 | AT4G19990 | 26.441 | 503 | 296 | 14 | 63 | 544 | 23 | 472 | 1.58e-37 | 150 |
MS.gene62016.t1 | AT4G19990 | 26.441 | 503 | 296 | 14 | 63 | 544 | 23 | 472 | 1.58e-37 | 150 |
MS.gene62016.t1 | AT1G52520 | 25.761 | 493 | 327 | 14 | 61 | 545 | 85 | 546 | 1.56e-36 | 146 |
MS.gene62016.t1 | AT2G27110 | 28.013 | 307 | 213 | 5 | 240 | 544 | 48 | 348 | 4.65e-36 | 145 |
MS.gene62016.t1 | AT4G19990 | 25.835 | 449 | 275 | 11 | 112 | 544 | 9 | 415 | 2.90e-33 | 136 |
MS.gene62016.t1 | AT1G80010 | 23.862 | 549 | 323 | 17 | 61 | 563 | 95 | 594 | 1.24e-32 | 135 |
MS.gene62016.t1 | AT4G38170 | 27.457 | 346 | 240 | 6 | 244 | 583 | 16 | 356 | 6.90e-31 | 128 |
Find 119 sgRNAs with CRISPR-Local
Find 161 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCTTTACCCATCGTAAATTT+TGG | 0.158198 | 7.2:-80084183 | MS.gene62016:CDS |
CCAATTAAAACTTACTTATT+AGG | 0.177601 | 7.2:+80083152 | None:intergenic |
ATGAGATGCCTCTTGGAATA+TGG | 0.196486 | 7.2:-80084684 | MS.gene62016:CDS |
TTCTCACAACCACGAGTTAT+TGG | 0.199264 | 7.2:-80085106 | MS.gene62016:CDS |
ATCACATGTTCTTGAGTTTC+AGG | 0.210618 | 7.2:+80083395 | None:intergenic |
CTCATGTTGAAGCAACTTAA+AGG | 0.248230 | 7.2:+80083829 | None:intergenic |
TGTTTATTTGCAAAACAAAA+TGG | 0.260407 | 7.2:-80085372 | MS.gene62016:CDS |
AAAATCTGTCAAACTTGTTT+TGG | 0.261322 | 7.2:+80084066 | None:intergenic |
ATTCGTGCATATGAAGCTTT+TGG | 0.265394 | 7.2:-80084748 | MS.gene62016:CDS |
CAATATGAATTCACAATTGA+TGG | 0.266214 | 7.2:-80084814 | MS.gene62016:CDS |
TTCCTTCGCATGGGCTATAA+AGG | 0.299718 | 7.2:-80084593 | MS.gene62016:intron |
AATATCATCATAAAGATAAA+AGG | 0.310779 | 7.2:-80083422 | MS.gene62016:CDS |
TCAAGAACATGTGATTGATT+TGG | 0.314506 | 7.2:-80083387 | MS.gene62016:CDS |
CATCAATTGTGAATTCATAT+TGG | 0.326055 | 7.2:+80084815 | None:intergenic |
GCAGCTTCAACCCCTCCTTT+TGG | 0.339248 | 7.2:+80083281 | None:intergenic |
ATTCAATCATATAGTGGTAT+TGG | 0.341059 | 7.2:-80084904 | MS.gene62016:CDS |
ACTCTCGCTATAAGACTTAC+AGG | 0.343612 | 7.2:+80084994 | None:intergenic |
CAAATTGGAGCATATTGTTT+GGG | 0.347369 | 7.2:-80084785 | MS.gene62016:CDS |
GAGCATATTGTTTGGGCATT+TGG | 0.348974 | 7.2:-80084778 | MS.gene62016:CDS |
ACAAATTGGAGCATATTGTT+TGG | 0.352856 | 7.2:-80084786 | MS.gene62016:CDS |
AATTGATGGAAGTAACAAAT+TGG | 0.358783 | 7.2:-80084800 | MS.gene62016:CDS |
ATGACAACGACGAGGCTTCT+TGG | 0.366012 | 7.2:+80083259 | None:intergenic |
TCAGTCTCTAATTCGATGTT+TGG | 0.372448 | 7.2:-80083501 | MS.gene62016:intron |
AACGTCACAGTCAGCATTGT+TGG | 0.377007 | 7.2:+80083352 | None:intergenic |
ATGGTCTCACAGTTTGGTTT+GGG | 0.387072 | 7.2:-80084229 | MS.gene62016:CDS |
GTAGTTACTAAGAGAAGAAT+TGG | 0.389295 | 7.2:-80085165 | MS.gene62016:CDS |
AATGGTCTCACAGTTTGGTT+TGG | 0.398201 | 7.2:-80084230 | MS.gene62016:CDS |
CCTCAGGTCACTAACATTGA+TGG | 0.404443 | 7.2:-80085561 | MS.gene62016:CDS |
TAGTGATTGGCCCTTGCCTC+AGG | 0.405183 | 7.2:-80085577 | MS.gene62016:CDS |
GCAATGGCTTCTTTAATTGA+AGG | 0.406562 | 7.2:+80084421 | None:intergenic |
TCAAATATTTGCCCTTCAAA+AGG | 0.411166 | 7.2:+80085531 | None:intergenic |
ATCCATCGGGTGTTTATAAG+AGG | 0.417116 | 7.2:-80085293 | MS.gene62016:CDS |
TTTGCTGGAATGACAACAAC+AGG | 0.418779 | 7.2:-80084133 | MS.gene62016:CDS |
AAAGTAATGGTCTCACAGTT+TGG | 0.427267 | 7.2:-80084235 | MS.gene62016:CDS |
TGAGATGCCTCTTGGAATAT+GGG | 0.433904 | 7.2:-80084683 | MS.gene62016:CDS |
TTGGGCCTTAGCTTATTTGA+AGG | 0.435274 | 7.2:-80084164 | MS.gene62016:CDS |
TATACGACCACCATCAACTT+TGG | 0.437731 | 7.2:+80083739 | None:intergenic |
CTTTAAACATGAGTTTCATA+AGG | 0.439926 | 7.2:-80084299 | MS.gene62016:CDS |
GACGAGGCATGTTCTTCAAT+AGG | 0.443666 | 7.2:+80083869 | None:intergenic |
TGATTAGTTCCACCACAATC+TGG | 0.446933 | 7.2:+80083233 | None:intergenic |
AACCGTTATGAGATGCCTCT+TGG | 0.448749 | 7.2:-80084691 | MS.gene62016:CDS |
AAAGACAAGTGAACGAGAAC+AGG | 0.453486 | 7.2:-80083465 | MS.gene62016:CDS |
GGAAAATGTGTTGTAATATG+AGG | 0.458305 | 7.2:+80083890 | None:intergenic |
GTTTGTCATCGTGGTGGTAT+TGG | 0.458689 | 7.2:-80085264 | MS.gene62016:CDS |
ATGCGATCTTGATCAACAAT+TGG | 0.465554 | 7.2:+80085042 | None:intergenic |
CTCACAGTTTGGTTTGGGTG+TGG | 0.468983 | 7.2:-80084224 | MS.gene62016:CDS |
ATAACGGTTTATTCTATATG+TGG | 0.472493 | 7.2:+80084705 | None:intergenic |
TATAAGACTTACAGGGCAAC+CGG | 0.483233 | 7.2:+80085002 | None:intergenic |
CTTGAGTTAGAGAAAAGAAC+AGG | 0.494786 | 7.2:-80084970 | MS.gene62016:CDS |
AAAACAAAAGGTCGGCCAAA+AGG | 0.495104 | 7.2:-80083311 | MS.gene62016:CDS |
TTGATAGGATCATGAAGGGT+TGG | 0.498564 | 7.2:-80083065 | MS.gene62016:intron |
TGAAGCAACTTAAAGGCATA+AGG | 0.499495 | 7.2:+80083836 | None:intergenic |
AGAAGATTTCTTCCTTCGCA+TGG | 0.503824 | 7.2:-80084603 | MS.gene62016:CDS |
CGTTGTCATGTTCCAGATTG+TGG | 0.504732 | 7.2:-80083245 | MS.gene62016:CDS |
AATTGTGAATTCATATTGGA+AGG | 0.507660 | 7.2:+80084819 | None:intergenic |
CCAAAAGGATCAAGACCAAA+AGG | 0.514192 | 7.2:-80083296 | MS.gene62016:CDS |
GTCAAAATTAGAAATCAAGC+TGG | 0.517568 | 7.2:-80083947 | MS.gene62016:CDS |
TTTAATTGAAGGATCTTGAT+CGG | 0.518039 | 7.2:+80084432 | None:intergenic |
ATTGGAATGTTACGATAAGC+AGG | 0.522557 | 7.2:+80085060 | None:intergenic |
ATGTTATTGACTTGAGGCAA+GGG | 0.525418 | 7.2:+80085459 | None:intergenic |
TAAGCAATGATGCTAGTGAT+TGG | 0.525487 | 7.2:-80085590 | MS.gene62016:CDS |
ACCACGCAAAACTGTTGAAG+TGG | 0.526679 | 7.2:-80085238 | MS.gene62016:CDS |
TTAGAGAAAAGAACAGGCAC+AGG | 0.528687 | 7.2:-80084964 | MS.gene62016:CDS |
TGGGTTGGTGTTGATAATCA+TGG | 0.529258 | 7.2:-80084664 | MS.gene62016:CDS |
ATACTATTATTGTCTAAAGC+CGG | 0.531055 | 7.2:-80085021 | MS.gene62016:CDS |
TTCCAAGAGGCATCTCATAA+CGG | 0.531646 | 7.2:+80084689 | None:intergenic |
CTCAGGTCACTAACATTGAT+GGG | 0.537467 | 7.2:-80085560 | MS.gene62016:CDS |
CAACATCATACCAAAGTTGA+TGG | 0.538288 | 7.2:-80083749 | MS.gene62016:CDS |
TGAACGAGAATGGAAAGTAA+TGG | 0.544871 | 7.2:-80084248 | MS.gene62016:CDS |
TTGCACAACATAAGAGCCAT+TGG | 0.551354 | 7.2:+80083769 | None:intergenic |
TAAGAGAAGAATTGGCATTG+AGG | 0.553953 | 7.2:-80085157 | MS.gene62016:CDS |
GAAGATTTCTTCCTTCGCAT+GGG | 0.556681 | 7.2:-80084602 | MS.gene62016:CDS |
GTGCTTTGATAGGATCATGA+AGG | 0.556862 | 7.2:-80083070 | MS.gene62016:intron |
ATGTTAGTGACCTGAGGCAA+GGG | 0.557252 | 7.2:+80085567 | None:intergenic |
CAAGTCAATAACATTGATGA+GGG | 0.558520 | 7.2:-80085450 | MS.gene62016:CDS |
AAAGTCCTTCAAATAAGCTA+AGG | 0.560983 | 7.2:+80084159 | None:intergenic |
ACATGTGATTGATTTGGAAG+AGG | 0.565753 | 7.2:-80083381 | MS.gene62016:CDS |
GTTTGGCAATTCCATTGCAA+TGG | 0.567761 | 7.2:+80084405 | None:intergenic |
ATGTGATTGTAGTGCAAAGA+TGG | 0.570079 | 7.2:-80085187 | MS.gene62016:CDS |
GTGTCAGAAGAGAATCCATC+GGG | 0.572540 | 7.2:-80085306 | MS.gene62016:CDS |
TCATCAATGTTATTGACTTG+AGG | 0.573525 | 7.2:+80085453 | None:intergenic |
GGTCACTAACATTGATGGGT+GGG | 0.575865 | 7.2:-80085556 | MS.gene62016:CDS |
AATTAAAGAAGCCATTGCAA+TGG | 0.576797 | 7.2:-80084416 | MS.gene62016:CDS |
TAGAAATCAAGCTGGAGAAG+AGG | 0.577533 | 7.2:-80083939 | MS.gene62016:CDS |
CGAGTTATTGGATGACAAAG+AGG | 0.580002 | 7.2:-80085094 | MS.gene62016:CDS |
AATGTTATTGACTTGAGGCA+AGG | 0.580693 | 7.2:+80085458 | None:intergenic |
AATGTTAGTGACCTGAGGCA+AGG | 0.580804 | 7.2:+80085566 | None:intergenic |
TTGTCGCAAAGCTGTCAAGT+TGG | 0.589381 | 7.2:-80084354 | MS.gene62016:CDS |
TCATCATATCTCGAACCTAG+TGG | 0.597376 | 7.2:+80084322 | None:intergenic |
AGGGAATTTGTTTGTCATCG+TGG | 0.598966 | 7.2:-80085273 | MS.gene62016:CDS |
TCCCTCTTATAAACACCCGA+TGG | 0.599604 | 7.2:+80085291 | None:intergenic |
GCAGCAATTGAAGCTGCCAA+TGG | 0.600590 | 7.2:-80083785 | MS.gene62016:CDS |
TACCTTTATAGCCCATGCGA+AGG | 0.601051 | 7.2:+80084591 | None:intergenic |
TCAAGTCAATAACATTGATG+AGG | 0.603097 | 7.2:-80085451 | MS.gene62016:CDS |
CTGTTGAAGTGGAAAATCAA+AGG | 0.606328 | 7.2:-80085227 | MS.gene62016:CDS |
CTTTGTCATCCAATAACTCG+TGG | 0.606716 | 7.2:+80085097 | None:intergenic |
AAGGATCAAGACCAAAAGGA+GGG | 0.611165 | 7.2:-80083292 | MS.gene62016:CDS |
CTAAGGCCCAAAATTTACGA+TGG | 0.615020 | 7.2:+80084176 | None:intergenic |
TAAGGCCCAAAATTTACGAT+GGG | 0.615697 | 7.2:+80084177 | None:intergenic |
ATGCCTCTTGGAATATGGGT+TGG | 0.616141 | 7.2:-80084679 | MS.gene62016:CDS |
GAATTTGTTTGTCATCGTGG+TGG | 0.618777 | 7.2:-80085270 | MS.gene62016:CDS |
AGGTCACTAACATTGATGGG+TGG | 0.619738 | 7.2:-80085557 | MS.gene62016:CDS |
TCCATCGGGTGTTTATAAGA+GGG | 0.625908 | 7.2:-80085292 | MS.gene62016:CDS |
ACGAGAACAGGTTGCCACAA+GGG | 0.630576 | 7.2:-80083453 | MS.gene62016:CDS |
TGTGTCAGAAGAGAATCCAT+CGG | 0.632507 | 7.2:-80085307 | MS.gene62016:CDS |
AACGAGAACAGGTTGCCACA+AGG | 0.633734 | 7.2:-80083454 | MS.gene62016:CDS |
TACTTATTAGGAGATTGAGA+AGG | 0.635742 | 7.2:+80083164 | None:intergenic |
TGTCATGTTCCAGATTGTGG+TGG | 0.637809 | 7.2:-80083242 | MS.gene62016:CDS |
CTCTCGCTATAAGACTTACA+GGG | 0.647869 | 7.2:+80084995 | None:intergenic |
AAAGGATCAAGACCAAAAGG+AGG | 0.655085 | 7.2:-80083293 | MS.gene62016:CDS |
CCATCAATGTTAGTGACCTG+AGG | 0.674244 | 7.2:+80085561 | None:intergenic |
ACACCAACCCATATTCCAAG+AGG | 0.676376 | 7.2:+80084676 | None:intergenic |
TGCTTTGATAGGATCATGAA+GGG | 0.676443 | 7.2:-80083069 | MS.gene62016:intron |
AAGTTTGAAAGATCGAGATG+AGG | 0.682349 | 7.2:-80084842 | MS.gene62016:CDS |
CATCATACCAAAGTTGATGG+TGG | 0.683172 | 7.2:-80083746 | MS.gene62016:CDS |
AGGATCAAGACCAAAAGGAG+GGG | 0.696841 | 7.2:-80083291 | MS.gene62016:CDS |
AAGTCAATAACATTGATGAG+GGG | 0.714581 | 7.2:-80085449 | MS.gene62016:CDS |
ATAAGGTGTGAGTATAGACG+AGG | 0.720548 | 7.2:+80083853 | None:intergenic |
TCTGGAACATGACAACGACG+AGG | 0.797744 | 7.2:+80083251 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TAATATTAACTGTATTTTTA+TGG | - | chr7.2:80085570-80085589 | MS.gene62016:CDS | 10.0% |
!! | AATATCATCATAAAGATAAA+AGG | - | chr7.2:80085240-80085259 | MS.gene62016:CDS | 15.0% |
!!! | AATTTTATTCAATCATATAG+TGG | - | chr7.2:80083752-80083771 | MS.gene62016:CDS | 15.0% |
!! | CCAATTAAAACTTACTTATT+AGG | + | chr7.2:80085513-80085532 | None:intergenic | 20.0% |
!! | TGTTTATTTGCAAAACAAAA+TGG | - | chr7.2:80083290-80083309 | MS.gene62016:CDS | 20.0% |
!!! | AACAAAATGGATTTTCTATT+AGG | - | chr7.2:80083303-80083322 | MS.gene62016:CDS | 20.0% |
!!! | CATGGAAATTCAATTTTTTT+TGG | - | chr7.2:80084016-80084035 | MS.gene62016:intron | 20.0% |
!!! | CCTAATAAGTAAGTTTTAAT+TGG | - | chr7.2:80085510-80085529 | MS.gene62016:CDS | 20.0% |
!!! | CTAATATCTTTTTCTAAGAA+TGG | + | chr7.2:80083731-80083750 | None:intergenic | 20.0% |
!!! | TGATTGTTATATTTTTGTGT+AGG | - | chr7.2:80084681-80084700 | MS.gene62016:CDS | 20.0% |
!!! | TTATTACATGACTAGATTTT+GGG | + | chr7.2:80085113-80085132 | None:intergenic | 20.0% |
!!! | TTTATTACATGACTAGATTT+TGG | + | chr7.2:80085114-80085133 | None:intergenic | 20.0% |
! | AATTGATGGAAGTAACAAAT+TGG | - | chr7.2:80083862-80083881 | MS.gene62016:CDS | 25.0% |
! | AATTGTGAATTCATATTGGA+AGG | + | chr7.2:80083846-80083865 | None:intergenic | 25.0% |
! | ATAACGGTTTATTCTATATG+TGG | + | chr7.2:80083960-80083979 | None:intergenic | 25.0% |
! | ATTCAATCATATAGTGGTAT+TGG | - | chr7.2:80083758-80083777 | MS.gene62016:CDS | 25.0% |
! | CAATATGAATTCACAATTGA+TGG | - | chr7.2:80083848-80083867 | MS.gene62016:CDS | 25.0% |
! | CATCAATTGTGAATTCATAT+TGG | + | chr7.2:80083850-80083869 | None:intergenic | 25.0% |
! | CTTTAAACATGAGTTTCATA+AGG | - | chr7.2:80084363-80084382 | MS.gene62016:CDS | 25.0% |
! | TCCAAACAAAAAGAGAAAAA+TGG | - | chr7.2:80085467-80085486 | MS.gene62016:CDS | 25.0% |
! | TTGTTTCAAAAACAAAAGGT+CGG | - | chr7.2:80085343-80085362 | MS.gene62016:CDS | 25.0% |
! | TTTAATTGAAGGATCTTGAT+CGG | + | chr7.2:80084233-80084252 | None:intergenic | 25.0% |
!! | ATACTATTATTGTCTAAAGC+CGG | - | chr7.2:80083641-80083660 | MS.gene62016:intron | 25.0% |
!! | TCAAATATTTTCCCTTCAAA+AGG | + | chr7.2:80083242-80083261 | None:intergenic | 25.0% |
!! | TGTAAAGAGTTTCAATTTTC+AGG | - | chr7.2:80084985-80085004 | MS.gene62016:CDS | 25.0% |
!!! | AAAATCTGTCAAACTTGTTT+TGG | + | chr7.2:80084599-80084618 | None:intergenic | 25.0% |
!!! | TATTTTTATGGTGCTTTGAT+AGG | - | chr7.2:80085582-80085601 | MS.gene62016:CDS | 25.0% |
!!! | TCCATTTTTCTCTTTTTGTT+TGG | + | chr7.2:80085471-80085490 | None:intergenic | 25.0% |
!!! | TGTTATATTTTTGTGTAGGT+TGG | - | chr7.2:80084685-80084704 | MS.gene62016:CDS | 25.0% |
AAAGTCCTTCAAATAAGCTA+AGG | + | chr7.2:80084506-80084525 | None:intergenic | 30.0% | |
AAGTCAATAACATTGATGAG+GGG | - | chr7.2:80083213-80083232 | MS.gene62016:CDS | 30.0% | |
AATTAAAGAAGCCATTGCAA+TGG | - | chr7.2:80084246-80084265 | MS.gene62016:CDS | 30.0% | |
ACAAATTGGAGCATATTGTT+TGG | - | chr7.2:80083876-80083895 | MS.gene62016:CDS | 30.0% | |
CAAATTGGAGCATATTGTTT+GGG | - | chr7.2:80083877-80083896 | MS.gene62016:CDS | 30.0% | |
CAAGTCAATAACATTGATGA+GGG | - | chr7.2:80083212-80083231 | MS.gene62016:CDS | 30.0% | |
CATGTAATAAACTGCAATGA+TGG | - | chr7.2:80085123-80085142 | MS.gene62016:CDS | 30.0% | |
GGAAAATGTGTTGTAATATG+AGG | + | chr7.2:80084775-80084794 | None:intergenic | 30.0% | |
GTAGTTACTAAGAGAAGAAT+TGG | - | chr7.2:80083497-80083516 | MS.gene62016:CDS | 30.0% | |
GTCAAAATTAGAAATCAAGC+TGG | - | chr7.2:80084715-80084734 | MS.gene62016:CDS | 30.0% | |
TACTTATTAGGAGATTGAGA+AGG | + | chr7.2:80085501-80085520 | None:intergenic | 30.0% | |
TCAAATATTTGCCCTTCAAA+AGG | + | chr7.2:80083134-80083153 | None:intergenic | 30.0% | |
TCAAGAACATGTGATTGATT+TGG | - | chr7.2:80085275-80085294 | MS.gene62016:CDS | 30.0% | |
TCAAGTCAATAACATTGATG+AGG | - | chr7.2:80083211-80083230 | MS.gene62016:CDS | 30.0% | |
! | AATTGGCATTGAGGAAAAAT+GGG | - | chr7.2:80083514-80083533 | MS.gene62016:intron | 30.0% |
! | ATTTTCCTTTCACAAAAGCT+AGG | + | chr7.2:80084192-80084211 | None:intergenic | 30.0% |
! | CAAAACATGCATTTTGCATA+TGG | - | chr7.2:80084281-80084300 | MS.gene62016:CDS | 30.0% |
! | CAAAATATCTTCCTTTTCGA+TGG | - | chr7.2:80085067-80085086 | MS.gene62016:CDS | 30.0% |
! | CAAAATGCATGTTTTGTGTT+TGG | + | chr7.2:80084277-80084296 | None:intergenic | 30.0% |
! | CTTTACCCATCGTAAATTTT+GGG | - | chr7.2:80084480-80084499 | MS.gene62016:CDS | 30.0% |
! | TCTTTACCCATCGTAAATTT+TGG | - | chr7.2:80084479-80084498 | MS.gene62016:CDS | 30.0% |
! | TGATCGGTAAGAATTGTTTT+TGG | + | chr7.2:80084217-80084236 | None:intergenic | 30.0% |
!! | CCTGTTGTTTCAAAAACAAA+AGG | - | chr7.2:80085339-80085358 | MS.gene62016:CDS | 30.0% |
!! | CGAAAAGGAAGATATTTTGA+TGG | + | chr7.2:80085066-80085085 | None:intergenic | 30.0% |
!! | TCATCAATGTTATTGACTTG+AGG | + | chr7.2:80083212-80083231 | None:intergenic | 30.0% |
!!! | CCTTTTGTTTTTGAAACAAC+AGG | + | chr7.2:80085342-80085361 | None:intergenic | 30.0% |
!!! | TTGAAGGACTTTTTTTTTGC+TGG | - | chr7.2:80084514-80084533 | MS.gene62016:intron | 30.0% |
AAAGTAATGGTCTCACAGTT+TGG | - | chr7.2:80084427-80084446 | MS.gene62016:CDS | 35.0% | |
AAGTTTGAAAGATCGAGATG+AGG | - | chr7.2:80083820-80083839 | MS.gene62016:CDS | 35.0% | |
ATCACATGTTCTTGAGTTTC+AGG | + | chr7.2:80085270-80085289 | None:intergenic | 35.0% | |
ATGCGATCTTGATCAACAAT+TGG | + | chr7.2:80083623-80083642 | None:intergenic | 35.0% | |
ATGTGATTGTAGTGCAAAGA+TGG | - | chr7.2:80083475-80083494 | MS.gene62016:CDS | 35.0% | |
ATTGGAATGTTACGATAAGC+AGG | + | chr7.2:80083605-80083624 | None:intergenic | 35.0% | |
CAACATCATACCAAAGTTGA+TGG | - | chr7.2:80084913-80084932 | MS.gene62016:CDS | 35.0% | |
CTCATGTTGAAGCAACTTAA+AGG | + | chr7.2:80084836-80084855 | None:intergenic | 35.0% | |
CTGTTGAAGTGGAAAATCAA+AGG | - | chr7.2:80083435-80083454 | MS.gene62016:CDS | 35.0% | |
CTTGAGTTAGAGAAAAGAAC+AGG | - | chr7.2:80083692-80083711 | MS.gene62016:intron | 35.0% | |
GCAATGGCTTCTTTAATTGA+AGG | + | chr7.2:80084244-80084263 | None:intergenic | 35.0% | |
TAAGAGAAGAATTGGCATTG+AGG | - | chr7.2:80083505-80083524 | MS.gene62016:intron | 35.0% | |
TAAGCAATGATGCTAGTGAT+TGG | - | chr7.2:80083072-80083091 | MS.gene62016:intron | 35.0% | |
TAAGGCCCAAAATTTACGAT+GGG | + | chr7.2:80084488-80084507 | None:intergenic | 35.0% | |
TAGAGACTGAAATTTAGCAG+AGG | + | chr7.2:80085151-80085170 | None:intergenic | 35.0% | |
TCAGTCTCTAATTCGATGTT+TGG | - | chr7.2:80085161-80085180 | MS.gene62016:CDS | 35.0% | |
TGAACGAGAATGGAAAGTAA+TGG | - | chr7.2:80084414-80084433 | MS.gene62016:CDS | 35.0% | |
TGCTTTGATAGGATCATGAA+GGG | - | chr7.2:80085593-80085612 | MS.gene62016:CDS | 35.0% | |
! | ATTCGTGCATATGAAGCTTT+TGG | - | chr7.2:80083914-80083933 | MS.gene62016:CDS | 35.0% |
! | CAGATGATTTTGAACGAGAA+TGG | - | chr7.2:80084404-80084423 | MS.gene62016:CDS | 35.0% |
! | GAATTGGCATTGAGGAAAAA+TGG | - | chr7.2:80083513-80083532 | MS.gene62016:intron | 35.0% |
! | GATATTTTCTAACTCCCTTG+TGG | + | chr7.2:80085226-80085245 | None:intergenic | 35.0% |
! | TGAAGCAACTTAAAGGCATA+AGG | + | chr7.2:80084829-80084848 | None:intergenic | 35.0% |
!! | AATGTTATTGACTTGAGGCA+AGG | + | chr7.2:80083207-80083226 | None:intergenic | 35.0% |
!! | ACATGTGATTGATTTGGAAG+AGG | - | chr7.2:80085281-80085300 | MS.gene62016:CDS | 35.0% |
!! | AGTTTCCTAGCTTTTGTGAA+AGG | - | chr7.2:80084184-80084203 | MS.gene62016:CDS | 35.0% |
!! | ATGTTATTGACTTGAGGCAA+GGG | + | chr7.2:80083206-80083225 | None:intergenic | 35.0% |
!!! | AGTTGGTTTTCTTTTCCACT+AGG | - | chr7.2:80084325-80084344 | MS.gene62016:CDS | 35.0% |
AAAACAAAAGGTCGGCCAAA+AGG | - | chr7.2:80085351-80085370 | MS.gene62016:CDS | 40.0% | |
AAAGACAAGTGAACGAGAAC+AGG | - | chr7.2:80085197-80085216 | MS.gene62016:CDS | 40.0% | |
AAAGGATCAAGACCAAAAGG+AGG | - | chr7.2:80085369-80085388 | MS.gene62016:CDS | 40.0% | |
AAGGATCAAGACCAAAAGGA+GGG | - | chr7.2:80085370-80085389 | MS.gene62016:CDS | 40.0% | |
AATGGTCTCACAGTTTGGTT+TGG | - | chr7.2:80084432-80084451 | MS.gene62016:CDS | 40.0% | |
ACTCTCGCTATAAGACTTAC+AGG | + | chr7.2:80083671-80083690 | None:intergenic | 40.0% | |
AGAAGATTTCTTCCTTCGCA+TGG | - | chr7.2:80084059-80084078 | MS.gene62016:CDS | 40.0% | |
ATAAGGTGTGAGTATAGACG+AGG | + | chr7.2:80084812-80084831 | None:intergenic | 40.0% | |
ATCCATCGGGTGTTTATAAG+AGG | - | chr7.2:80083369-80083388 | MS.gene62016:CDS | 40.0% | |
ATGAGATGCCTCTTGGAATA+TGG | - | chr7.2:80083978-80083997 | MS.gene62016:intron | 40.0% | |
CCAAAAGGATCAAGACCAAA+AGG | - | chr7.2:80085366-80085385 | MS.gene62016:CDS | 40.0% | |
CGAGTTATTGGATGACAAAG+AGG | - | chr7.2:80083568-80083587 | MS.gene62016:intron | 40.0% | |
CTAAGGCCCAAAATTTACGA+TGG | + | chr7.2:80084489-80084508 | None:intergenic | 40.0% | |
CTCAGGTCACTAACATTGAT+GGG | - | chr7.2:80083102-80083121 | MS.gene62016:intron | 40.0% | |
CTCTCGCTATAAGACTTACA+GGG | + | chr7.2:80083670-80083689 | None:intergenic | 40.0% | |
CTTTGTCATCCAATAACTCG+TGG | + | chr7.2:80083568-80083587 | None:intergenic | 40.0% | |
GAAGATTTCTTCCTTCGCAT+GGG | - | chr7.2:80084060-80084079 | MS.gene62016:CDS | 40.0% | |
GAGCATATTGTTTGGGCATT+TGG | - | chr7.2:80083884-80083903 | MS.gene62016:CDS | 40.0% | |
GTGCTTTGATAGGATCATGA+AGG | - | chr7.2:80085592-80085611 | MS.gene62016:CDS | 40.0% | |
GTTTGGCAATTCCATTGCAA+TGG | + | chr7.2:80084260-80084279 | None:intergenic | 40.0% | |
TAGAAATCAAGCTGGAGAAG+AGG | - | chr7.2:80084723-80084742 | MS.gene62016:CDS | 40.0% | |
TATAAGACTTACAGGGCAAC+CGG | + | chr7.2:80083663-80083682 | None:intergenic | 40.0% | |
TATACGACCACCATCAACTT+TGG | + | chr7.2:80084926-80084945 | None:intergenic | 40.0% | |
TCATCATATCTCGAACCTAG+TGG | + | chr7.2:80084343-80084362 | None:intergenic | 40.0% | |
TCCATCGGGTGTTTATAAGA+GGG | - | chr7.2:80083370-80083389 | MS.gene62016:CDS | 40.0% | |
TGAGATGCCTCTTGGAATAT+GGG | - | chr7.2:80083979-80083998 | MS.gene62016:intron | 40.0% | |
TGTGTCAGAAGAGAATCCAT+CGG | - | chr7.2:80083355-80083374 | MS.gene62016:CDS | 40.0% | |
TTAGAGAAAAGAACAGGCAC+AGG | - | chr7.2:80083698-80083717 | MS.gene62016:intron | 40.0% | |
TTCTCACAACCACGAGTTAT+TGG | - | chr7.2:80083556-80083575 | MS.gene62016:intron | 40.0% | |
TTGATAGGATCATGAAGGGT+TGG | - | chr7.2:80085597-80085616 | MS.gene62016:CDS | 40.0% | |
TTGCACAACATAAGAGCCAT+TGG | + | chr7.2:80084896-80084915 | None:intergenic | 40.0% | |
TTGGGCCTTAGCTTATTTGA+AGG | - | chr7.2:80084498-80084517 | MS.gene62016:intron | 40.0% | |
TTTGCTGGAATGACAACAAC+AGG | - | chr7.2:80084529-80084548 | MS.gene62016:intron | 40.0% | |
! | AGGGAATTTGTTTGTCATCG+TGG | - | chr7.2:80083389-80083408 | MS.gene62016:CDS | 40.0% |
! | ATGAGGGGATTCCTTTTGAA+GGG | - | chr7.2:80083228-80083247 | MS.gene62016:CDS | 40.0% |
! | ATGGTCTCACAGTTTGGTTT+GGG | - | chr7.2:80084433-80084452 | MS.gene62016:CDS | 40.0% |
! | GAATTTGTTTGTCATCGTGG+TGG | - | chr7.2:80083392-80083411 | MS.gene62016:CDS | 40.0% |
! | TGATTAGTTCCACCACAATC+TGG | + | chr7.2:80085432-80085451 | None:intergenic | 40.0% |
!! | CATCATACCAAAGTTGATGG+TGG | - | chr7.2:80084916-80084935 | MS.gene62016:CDS | 40.0% |
!! | TGGGTTGGTGTTGATAATCA+TGG | - | chr7.2:80083998-80084017 | MS.gene62016:intron | 40.0% |
!! | TTCCAAGAGGCATCTCATAA+CGG | + | chr7.2:80083976-80083995 | None:intergenic | 40.0% |
!!! | CCTTTTGGTCTTGATCCTTT+TGG | + | chr7.2:80085369-80085388 | None:intergenic | 40.0% |
AACCGTTATGAGATGCCTCT+TGG | - | chr7.2:80083971-80083990 | MS.gene62016:intron | 45.0% | |
AACGTCACAGTCAGCATTGT+TGG | + | chr7.2:80085313-80085332 | None:intergenic | 45.0% | |
AATGTTAGTGACCTGAGGCA+AGG | + | chr7.2:80083099-80083118 | None:intergenic | 45.0% | |
ACACCAACCCATATTCCAAG+AGG | + | chr7.2:80083989-80084008 | None:intergenic | 45.0% | |
ACCACGCAAAACTGTTGAAG+TGG | - | chr7.2:80083424-80083443 | MS.gene62016:CDS | 45.0% | |
AGGATCAAGACCAAAAGGAG+GGG | - | chr7.2:80085371-80085390 | MS.gene62016:CDS | 45.0% | |
AGGTCACTAACATTGATGGG+TGG | - | chr7.2:80083105-80083124 | MS.gene62016:intron | 45.0% | |
ATGCCTCTTGGAATATGGGT+TGG | - | chr7.2:80083983-80084002 | MS.gene62016:intron | 45.0% | |
ATGTTAGTGACCTGAGGCAA+GGG | + | chr7.2:80083098-80083117 | None:intergenic | 45.0% | |
CCATCAATGTTAGTGACCTG+AGG | + | chr7.2:80083104-80083123 | None:intergenic | 45.0% | |
CCTCAGGTCACTAACATTGA+TGG | - | chr7.2:80083101-80083120 | MS.gene62016:intron | 45.0% | |
CGTTGTCATGTTCCAGATTG+TGG | - | chr7.2:80085417-80085436 | MS.gene62016:CDS | 45.0% | |
CTTTCTCGTCTCCATCGAAA+AGG | + | chr7.2:80085081-80085100 | None:intergenic | 45.0% | |
GACGAGGCATGTTCTTCAAT+AGG | + | chr7.2:80084796-80084815 | None:intergenic | 45.0% | |
GTGTCAGAAGAGAATCCATC+GGG | - | chr7.2:80083356-80083375 | MS.gene62016:CDS | 45.0% | |
GTTTGTCATCGTGGTGGTAT+TGG | - | chr7.2:80083398-80083417 | MS.gene62016:CDS | 45.0% | |
TACCTTTATAGCCCATGCGA+AGG | + | chr7.2:80084074-80084093 | None:intergenic | 45.0% | |
TCCCTCTTATAAACACCCGA+TGG | + | chr7.2:80083374-80083393 | None:intergenic | 45.0% | |
TGTCATGTTCCAGATTGTGG+TGG | - | chr7.2:80085420-80085439 | MS.gene62016:CDS | 45.0% | |
TTGTCGCAAAGCTGTCAAGT+TGG | - | chr7.2:80084308-80084327 | MS.gene62016:CDS | 45.0% | |
! | GATGAGGGGATTCCTTTTGA+AGG | - | chr7.2:80083227-80083246 | MS.gene62016:CDS | 45.0% |
! | GGTCACTAACATTGATGGGT+GGG | - | chr7.2:80083106-80083125 | MS.gene62016:intron | 45.0% |
! | TCCACTTCAACAGTTTTGCG+TGG | + | chr7.2:80083428-80083447 | None:intergenic | 45.0% |
! | TGGCATTGAGGAAAAATGGG+TGG | - | chr7.2:80083517-80083536 | MS.gene62016:intron | 45.0% |
! | TTCCTTCGCATGGGCTATAA+AGG | - | chr7.2:80084069-80084088 | MS.gene62016:CDS | 45.0% |
!! | ATGGGTGGGTTCCTTTTGAA+GGG | - | chr7.2:80083120-80083139 | MS.gene62016:intron | 45.0% |
AACGAGAACAGGTTGCCACA+AGG | - | chr7.2:80085208-80085227 | MS.gene62016:CDS | 50.0% | |
ACGAGAACAGGTTGCCACAA+GGG | - | chr7.2:80085209-80085228 | MS.gene62016:CDS | 50.0% | |
ATGACAACGACGAGGCTTCT+TGG | + | chr7.2:80085406-80085425 | None:intergenic | 50.0% | |
GCAGCAATTGAAGCTGCCAA+TGG | - | chr7.2:80084877-80084896 | MS.gene62016:CDS | 50.0% | |
! | TCTGGAACATGACAACGACG+AGG | + | chr7.2:80085414-80085433 | None:intergenic | 50.0% |
!! | CTCACAGTTTGGTTTGGGTG+TGG | - | chr7.2:80084438-80084457 | MS.gene62016:CDS | 50.0% |
!! | GATGGGTGGGTTCCTTTTGA+AGG | - | chr7.2:80083119-80083138 | MS.gene62016:intron | 50.0% |
! | GCAGCTTCAACCCCTCCTTT+TGG | + | chr7.2:80085384-80085403 | None:intergenic | 55.0% |
! | TAGTGATTGGCCCTTGCCTC+AGG | - | chr7.2:80083085-80083104 | MS.gene62016:intron | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.2 | gene | 80083059 | 80085625 | 80083059 | ID=MS.gene62016 |
chr7.2 | mRNA | 80083059 | 80085625 | 80083059 | ID=MS.gene62016.t1;Parent=MS.gene62016 |
chr7.2 | exon | 80084594 | 80085625 | 80084594 | ID=MS.gene62016.t1.exon1;Parent=MS.gene62016.t1 |
chr7.2 | CDS | 80084594 | 80085625 | 80084594 | ID=cds.MS.gene62016.t1;Parent=MS.gene62016.t1 |
chr7.2 | exon | 80084057 | 80084500 | 80084057 | ID=MS.gene62016.t1.exon2;Parent=MS.gene62016.t1 |
chr7.2 | CDS | 80084057 | 80084500 | 80084057 | ID=cds.MS.gene62016.t1;Parent=MS.gene62016.t1 |
chr7.2 | exon | 80083739 | 80083981 | 80083739 | ID=MS.gene62016.t1.exon3;Parent=MS.gene62016.t1 |
chr7.2 | CDS | 80083739 | 80083981 | 80083739 | ID=cds.MS.gene62016.t1;Parent=MS.gene62016.t1 |
chr7.2 | exon | 80083167 | 80083519 | 80083167 | ID=MS.gene62016.t1.exon4;Parent=MS.gene62016.t1 |
chr7.2 | CDS | 80083167 | 80083519 | 80083167 | ID=cds.MS.gene62016.t1;Parent=MS.gene62016.t1 |
chr7.2 | exon | 80083059 | 80083080 | 80083059 | ID=MS.gene62016.t1.exon5;Parent=MS.gene62016.t1 |
chr7.2 | CDS | 80083059 | 80083080 | 80083059 | ID=cds.MS.gene62016.t1;Parent=MS.gene62016.t1 |
Gene Sequence |
Protein sequence |