Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62452.t1 | XP_024637524.1 | 91 | 122 | 11 | 0 | 30 | 151 | 1 | 122 | 1.30E-65 | 259.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62452.t1 | G7JVA8 | 98.2 | 113 | 2 | 0 | 30 | 142 | 1 | 113 | 1.6e-65 | 258.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene32612 | MS.gene62452 | PPI |
| MS.gene072918 | MS.gene62452 | PPI |
| MS.gene014815 | MS.gene62452 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62452.t1 | MTR_4g113840 | 85.075 | 134 | 19 | 1 | 30 | 162 | 1 | 134 | 5.81e-79 | 231 |
| MS.gene62452.t1 | MTR_2g054750 | 72.566 | 113 | 19 | 1 | 30 | 142 | 1 | 101 | 4.45e-55 | 170 |
| MS.gene62452.t1 | MTR_4g011190 | 46.281 | 121 | 50 | 4 | 35 | 142 | 5 | 123 | 4.46e-27 | 99.8 |
| MS.gene62452.t1 | MTR_3g107610 | 40.876 | 137 | 49 | 5 | 35 | 142 | 5 | 138 | 5.11e-20 | 82.4 |
| MS.gene62452.t1 | MTR_3g107610 | 40.876 | 137 | 49 | 5 | 35 | 142 | 5 | 138 | 2.53e-19 | 80.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62452.t1 | AT2G26695 | 65.789 | 114 | 36 | 2 | 30 | 142 | 1 | 112 | 6.10e-53 | 165 |
| MS.gene62452.t1 | AT2G26695 | 65.789 | 114 | 36 | 2 | 30 | 142 | 1 | 112 | 6.10e-53 | 165 |
| MS.gene62452.t1 | AT3G15680 | 36.774 | 155 | 74 | 6 | 35 | 165 | 5 | 159 | 6.92e-21 | 84.3 |
| MS.gene62452.t1 | AT3G15680 | 36.774 | 155 | 74 | 6 | 35 | 165 | 5 | 159 | 6.92e-21 | 84.3 |
| MS.gene62452.t1 | AT5G25490 | 34.161 | 161 | 76 | 5 | 35 | 165 | 5 | 165 | 2.10e-20 | 83.2 |
| MS.gene62452.t1 | AT5G25490 | 34.161 | 161 | 76 | 5 | 35 | 165 | 5 | 165 | 2.10e-20 | 83.2 |
Find 42 sgRNAs with CRISPR-Local
Find 118 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTTTGGGTATCCACAATTT+TGG | 0.191501 | 8.2:+14469273 | None:intergenic |
| GATCATTATTCTTCTGGATA+TGG | 0.206689 | 8.2:-14469113 | MS.gene62452:CDS |
| TTTAAAGATCATTATTCTTC+TGG | 0.213538 | 8.2:-14469119 | MS.gene62452:CDS |
| TGATGTAGGGAAAGCTAAAT+AGG | 0.338171 | 8.2:+14468140 | None:intergenic |
| TTCAGTCCTGTTATATCTAT+AGG | 0.338196 | 8.2:+14469229 | None:intergenic |
| ATCATTATTCTTCTGGATAT+GGG | 0.365982 | 8.2:-14469112 | MS.gene62452:CDS |
| AATTGTGGATACCCAAAGTA+TGG | 0.373044 | 8.2:-14469269 | MS.gene62452:CDS |
| TATCTATAGGTTGATGGGTC+AGG | 0.380599 | 8.2:+14469242 | None:intergenic |
| GGTCAGGGCCTCCATACTTT+GGG | 0.383448 | 8.2:+14469258 | None:intergenic |
| GGGTCAGGGCCTCCATACTT+TGG | 0.410327 | 8.2:+14469257 | None:intergenic |
| AACAGGAAAATGAGCTGGTC+TGG | 0.419264 | 8.2:-14469353 | MS.gene62452:intron |
| ATGGTGAGTTCTGGAGGATA+TGG | 0.428894 | 8.2:-14469083 | MS.gene62452:CDS |
| CATCAACCTATAGATATAAC+AGG | 0.431667 | 8.2:-14469235 | MS.gene62452:CDS |
| CTGTTATATCTATAGGTTGA+TGG | 0.432543 | 8.2:+14469236 | None:intergenic |
| TTGGAGGAGAAAGATGTTGA+GGG | 0.482935 | 8.2:+14468171 | None:intergenic |
| CTGAAACGTTGGCAGGGGAC+TGG | 0.496040 | 8.2:-14469211 | MS.gene62452:CDS |
| ACCAGTTGAAAGACCTATTG+TGG | 0.504479 | 8.2:+14469940 | None:intergenic |
| AACAGGACTGAAACGTTGGC+AGG | 0.506879 | 8.2:-14469218 | MS.gene62452:CDS |
| TTATTCATACTCTTCTTCAA+AGG | 0.512519 | 8.2:-14469815 | MS.gene62452:intron |
| TGAGCTGGTCTGGAGGAGAT+TGG | 0.515298 | 8.2:-14469343 | MS.gene62452:CDS |
| TGTTATATCTATAGGTTGAT+GGG | 0.518610 | 8.2:+14469237 | None:intergenic |
| CCCACAATAGGTCTTTCAAC+TGG | 0.530285 | 8.2:-14469941 | MS.gene62452:intron |
| CACATCTATAGCAGTTTGAT+CGG | 0.536065 | 8.2:+14469147 | None:intergenic |
| ATCTATAGGTTGATGGGTCA+GGG | 0.537334 | 8.2:+14469243 | None:intergenic |
| CAGGATGGAAAAGTGGAGAC+TGG | 0.542885 | 8.2:-14469040 | MS.gene62452:CDS |
| TCATTATTCTTCTGGATATG+GGG | 0.550458 | 8.2:-14469111 | MS.gene62452:CDS |
| CCAGTTGAAAGACCTATTGT+GGG | 0.553725 | 8.2:+14469941 | None:intergenic |
| TTTGGAGGAGAAAGATGTTG+AGG | 0.555398 | 8.2:+14468170 | None:intergenic |
| AGGAAAATGAGCTGGTCTGG+AGG | 0.557211 | 8.2:-14469350 | MS.gene62452:CDS |
| GTGGAGACTGGATTTGCCCT+AGG | 0.558224 | 8.2:-14469028 | MS.gene62452:intron |
| AGAGAAGCATGCCAAAATTG+TGG | 0.558332 | 8.2:-14469284 | MS.gene62452:CDS |
| GGTAACATGGTGAGTTCTGG+AGG | 0.561232 | 8.2:-14469089 | MS.gene62452:CDS |
| ACAGGACTGAAACGTTGGCA+GGG | 0.573031 | 8.2:-14469217 | MS.gene62452:CDS |
| ATATAACAGGACTGAAACGT+TGG | 0.578735 | 8.2:-14469222 | MS.gene62452:CDS |
| CAATGAACAGGAAAATGAGC+TGG | 0.583001 | 8.2:-14469358 | MS.gene62452:intron |
| CAGGACTGAAACGTTGGCAG+GGG | 0.599861 | 8.2:-14469216 | MS.gene62452:CDS |
| CATTATTCTTCTGGATATGG+GGG | 0.604836 | 8.2:-14469110 | MS.gene62452:CDS |
| CGATCAAACTGCTATAGATG+TGG | 0.635461 | 8.2:-14469146 | MS.gene62452:CDS |
| TCTGGAGGAGATTGGATGTG+TGG | 0.641624 | 8.2:-14469335 | MS.gene62452:CDS |
| TGTGGATACCCAAAGTATGG+AGG | 0.657966 | 8.2:-14469266 | MS.gene62452:CDS |
| CAGTTGAAAGACCTATTGTG+GGG | 0.686483 | 8.2:+14469942 | None:intergenic |
| AGTTGAAAGACCTATTGTGG+GGG | 0.713227 | 8.2:+14469943 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTCCAAAAATAATAATAA+TGG | - | chr8.2:14469524-14469543 | MS.gene62452:intron | 10.0% |
| !! | AATGATTAAGATTAAGAATA+AGG | - | chr8.2:14469465-14469484 | MS.gene62452:intron | 15.0% |
| !! | GTTATTTACTTTATACTTAT+TGG | + | chr8.2:14468416-14468435 | None:intergenic | 15.0% |
| !!! | ATCACCATTATTATTATTTT+TGG | + | chr8.2:14469531-14469550 | None:intergenic | 15.0% |
| !!! | TCTTAATCTTAATCATTTTA+TGG | + | chr8.2:14469462-14469481 | None:intergenic | 15.0% |
| !!! | TGGTAAATTTTAAGATATTT+AGG | + | chr8.2:14468708-14468727 | None:intergenic | 15.0% |
| !! | AAAACAAAGATACTCAAATT+AGG | + | chr8.2:14469639-14469658 | None:intergenic | 20.0% |
| !! | AAACAAAGATACTCAAATTA+GGG | + | chr8.2:14469638-14469657 | None:intergenic | 20.0% |
| !! | TATTTGTGCAAATAACTTAA+TGG | - | chr8.2:14468483-14468502 | MS.gene62452:intron | 20.0% |
| !! | TTATTACTATTGTTTGTTTC+AGG | - | chr8.2:14469854-14469873 | MS.gene62452:intron | 20.0% |
| !! | TTTAAAGATCATTATTCTTC+TGG | - | chr8.2:14468982-14469001 | MS.gene62452:intron | 20.0% |
| !!! | TGCACAAATAAATATAGTTT+TGG | + | chr8.2:14468473-14468492 | None:intergenic | 20.0% |
| !!! | TTAAGAATGGTTTGTAAATA+AGG | + | chr8.2:14468223-14468242 | None:intergenic | 20.0% |
| ! | AAAGAAGATTTGATAAGCTA+AGG | - | chr8.2:14468558-14468577 | MS.gene62452:intron | 25.0% |
| ! | AATATGTCAACTGTCATAAA+AGG | - | chr8.2:14469259-14469278 | MS.gene62452:CDS | 25.0% |
| ! | ATCATTATTCTTCTGGATAT+GGG | - | chr8.2:14468989-14469008 | MS.gene62452:intron | 25.0% |
| ! | GCAATCTCTTTATTAATCAA+AGG | + | chr8.2:14469213-14469232 | None:intergenic | 25.0% |
| ! | TAGAGATGGTTATATATCAT+TGG | - | chr8.2:14469820-14469839 | MS.gene62452:CDS | 25.0% |
| ! | TCAATATAAACAAGTTCAGT+TGG | - | chr8.2:14469565-14469584 | MS.gene62452:intron | 25.0% |
| ! | TTATTCATACTCTTCTTCAA+AGG | - | chr8.2:14468286-14468305 | MS.gene62452:intron | 25.0% |
| ! | TTGCTATAGTAGTTTAAGAA+TGG | + | chr8.2:14468236-14468255 | None:intergenic | 25.0% |
| ! | TTTATACTTATTGGAGTTTC+AGG | + | chr8.2:14468407-14468426 | None:intergenic | 25.0% |
| !! | TATGACAGTTGACATATTTT+TGG | + | chr8.2:14469257-14469276 | None:intergenic | 25.0% |
| !!! | TGTTATATCTATAGGTTGAT+GGG | + | chr8.2:14468867-14468886 | None:intergenic | 25.0% |
| AAAGATACTCAAATTAGGGA+AGG | + | chr8.2:14469634-14469653 | None:intergenic | 30.0% | |
| AAGATAATGTGAACTAACCT+AGG | + | chr8.2:14469093-14469112 | None:intergenic | 30.0% | |
| AAGATACTCAAATTAGGGAA+GGG | + | chr8.2:14469633-14469652 | None:intergenic | 30.0% | |
| AGATAATGTGAACTAACCTA+GGG | + | chr8.2:14469092-14469111 | None:intergenic | 30.0% | |
| CATCAACCTATAGATATAAC+AGG | - | chr8.2:14468866-14468885 | MS.gene62452:intron | 30.0% | |
| CTATAAATGCAAAATGCCAA+GGG | - | chr8.2:14469715-14469734 | MS.gene62452:intron | 30.0% | |
| GAGAAGGATAGGATTATAAT+CGG | - | chr8.2:14469372-14469391 | MS.gene62452:intron | 30.0% | |
| GAGAATATTATCTCAAAACC+TGG | + | chr8.2:14468612-14468631 | None:intergenic | 30.0% | |
| GATAATTACAATACAGACAG+TGG | - | chr8.2:14469496-14469515 | MS.gene62452:intron | 30.0% | |
| GATCATTATTCTTCTGGATA+TGG | - | chr8.2:14468988-14469007 | MS.gene62452:intron | 30.0% | |
| GTTTCATTCATCTTGAAACT+AGG | - | chr8.2:14468378-14468397 | MS.gene62452:intron | 30.0% | |
| TCATTATTCTTCTGGATATG+GGG | - | chr8.2:14468990-14469009 | MS.gene62452:intron | 30.0% | |
| TTACTATTGTTTGTTTCAGG+CGG | - | chr8.2:14469857-14469876 | MS.gene62452:intron | 30.0% | |
| TTATAATCCTATCCTTCTCT+CGG | + | chr8.2:14469371-14469390 | None:intergenic | 30.0% | |
| TTCAGTCCTGTTATATCTAT+AGG | + | chr8.2:14468875-14468894 | None:intergenic | 30.0% | |
| TTTATGTGATGAAGCAGAAT+TGG | - | chr8.2:14469656-14469675 | MS.gene62452:intron | 30.0% | |
| ! | AATAATGGTGATGATACAGA+CGG | - | chr8.2:14469539-14469558 | MS.gene62452:intron | 30.0% |
| ! | CGTGTCTTTTAATATAAGCA+GGG | - | chr8.2:14468515-14468534 | MS.gene62452:intron | 30.0% |
| ! | CTGAGAAAAAACACTTTTAG+AGG | + | chr8.2:14469187-14469206 | None:intergenic | 30.0% |
| ! | CTGTTATATCTATAGGTTGA+TGG | + | chr8.2:14468868-14468887 | None:intergenic | 30.0% |
| ! | GTGTCTTTTAATATAAGCAG+GGG | - | chr8.2:14468516-14468535 | MS.gene62452:intron | 30.0% |
| ! | TAAATAGGATTTTCGTTTGG+AGG | + | chr8.2:14469949-14469968 | None:intergenic | 30.0% |
| !! | CACTATATGTTACTTTGCAA+GGG | + | chr8.2:14469398-14469417 | None:intergenic | 30.0% |
| !! | TCACTATATGTTACTTTGCA+AGG | + | chr8.2:14469399-14469418 | None:intergenic | 30.0% |
| AAGACAGATGATACGTCTAA+AGG | + | chr8.2:14469762-14469781 | None:intergenic | 35.0% | |
| AATTGTGGATACCCAAAGTA+TGG | - | chr8.2:14468832-14468851 | MS.gene62452:intron | 35.0% | |
| AGACAGATGATACGTCTAAA+GGG | + | chr8.2:14469761-14469780 | None:intergenic | 35.0% | |
| AGTTTGATGCTTATGTTGTG+AGG | + | chr8.2:14468195-14468214 | None:intergenic | 35.0% | |
| ATATAACAGGACTGAAACGT+TGG | - | chr8.2:14468879-14468898 | MS.gene62452:intron | 35.0% | |
| CACATCTATAGCAGTTTGAT+CGG | + | chr8.2:14468957-14468976 | None:intergenic | 35.0% | |
| CATTATTCTTCTGGATATGG+GGG | - | chr8.2:14468991-14469010 | MS.gene62452:intron | 35.0% | |
| GAATGCATAATTATGCAAGC+AGG | - | chr8.2:14469684-14469703 | MS.gene62452:intron | 35.0% | |
| GCTATAAATGCAAAATGCCA+AGG | - | chr8.2:14469714-14469733 | MS.gene62452:intron | 35.0% | |
| ! | ACTTTGGGTATCCACAATTT+TGG | + | chr8.2:14468831-14468850 | None:intergenic | 35.0% |
| ! | GCGTGTCTTTTAATATAAGC+AGG | - | chr8.2:14468514-14468533 | MS.gene62452:intron | 35.0% |
| ! | TGCTTTCATGACAGAGTATT+CGG | - | chr8.2:14468443-14468462 | MS.gene62452:intron | 35.0% |
| ! | TTTTGCACTTCTATGAACTG+CGG | - | chr8.2:14468913-14468932 | MS.gene62452:intron | 35.0% |
| !! | GAATTTTAAGTAGCACATCC+AGG | - | chr8.2:14468591-14468610 | MS.gene62452:intron | 35.0% |
| !! | TGAGTACTGATAGAACTTTG+TGG | - | chr8.2:14469122-14469141 | MS.gene62452:CDS | 35.0% |
| !!! | AAGAGTGCAGTATTTTTTGC+AGG | - | chr8.2:14469430-14469449 | MS.gene62452:intron | 35.0% |
| AATTCCAGGCTACATACACA+GGG | - | chr8.2:14468644-14468663 | MS.gene62452:intron | 40.0% | |
| ACCAGTTGAAAGACCTATTG+TGG | + | chr8.2:14468164-14468183 | None:intergenic | 40.0% | |
| AGTTGAAAGACCTATTGTGG+GGG | + | chr8.2:14468161-14468180 | None:intergenic | 40.0% | |
| CAATGAACAGGAAAATGAGC+TGG | - | chr8.2:14468743-14468762 | MS.gene62452:intron | 40.0% | |
| CACATGTTTCCACAATGAAC+AGG | - | chr8.2:14468731-14468750 | MS.gene62452:intron | 40.0% | |
| CAGTTGAAAGACCTATTGTG+GGG | + | chr8.2:14468162-14468181 | None:intergenic | 40.0% | |
| CATTGTGGAAACATGTGAAG+TGG | + | chr8.2:14468728-14468747 | None:intergenic | 40.0% | |
| CCAGTTGAAAGACCTATTGT+GGG | + | chr8.2:14468163-14468182 | None:intergenic | 40.0% | |
| CGATCAAACTGCTATAGATG+TGG | - | chr8.2:14468955-14468974 | MS.gene62452:intron | 40.0% | |
| TGCAAAATGCCAAGGGATTA+TGG | - | chr8.2:14469722-14469741 | MS.gene62452:intron | 40.0% | |
| TTGGAGGAGAAAGATGTTGA+GGG | + | chr8.2:14469933-14469952 | None:intergenic | 40.0% | |
| TTTGGAGGAGAAAGATGTTG+AGG | + | chr8.2:14469934-14469953 | None:intergenic | 40.0% | |
| ! | AGAGAAGCATGCCAAAATTG+TGG | - | chr8.2:14468817-14468836 | MS.gene62452:intron | 40.0% |
| ! | CTTTTCTCACCATAATCCCT+TGG | + | chr8.2:14469734-14469753 | None:intergenic | 40.0% |
| ! | GCTCATTTTCCTGTTCATTG+TGG | + | chr8.2:14468743-14468762 | None:intergenic | 40.0% |
| ! | GTCAAGCTGTTCTTTAGAGA+TGG | - | chr8.2:14469806-14469825 | MS.gene62452:intron | 40.0% |
| !! | ATCTATAGGTTGATGGGTCA+GGG | + | chr8.2:14468861-14468880 | None:intergenic | 40.0% |
| !! | TATCTATAGGTTGATGGGTC+AGG | + | chr8.2:14468862-14468881 | None:intergenic | 40.0% |
| AACAGGAAAATGAGCTGGTC+TGG | - | chr8.2:14468748-14468767 | MS.gene62452:intron | 45.0% | |
| AATTCCCTGTGTATGTAGCC+TGG | + | chr8.2:14468651-14468670 | None:intergenic | 45.0% | |
| CAATTCCAGGCTACATACAC+AGG | - | chr8.2:14468643-14468662 | MS.gene62452:intron | 45.0% | |
| CCCACAATAGGTCTTTCAAC+TGG | - | chr8.2:14468160-14468179 | MS.gene62452:CDS | 45.0% | |
| CTGTGTATGTAGCCTGGAAT+TGG | + | chr8.2:14468645-14468664 | None:intergenic | 45.0% | |
| TAATCCTATCCTTCTCTCGG+AGG | + | chr8.2:14469368-14469387 | None:intergenic | 45.0% | |
| TGATGAAGCAGAATTGGCTG+TGG | - | chr8.2:14469662-14469681 | MS.gene62452:intron | 45.0% | |
| TGTGGATACCCAAAGTATGG+AGG | - | chr8.2:14468835-14468854 | MS.gene62452:intron | 45.0% | |
| TTCTGGATATGGGGGTAACA+TGG | - | chr8.2:14468999-14469018 | MS.gene62452:intron | 45.0% | |
| ! | AATGGTGATGATACAGACGG+TGG | - | chr8.2:14469542-14469561 | MS.gene62452:intron | 45.0% |
| !! | AGTCTCCACTTTTCCATCCT+GGG | + | chr8.2:14469062-14469081 | None:intergenic | 45.0% |
| !! | ATGGTGAGTTCTGGAGGATA+TGG | - | chr8.2:14469018-14469037 | MS.gene62452:intron | 45.0% |
| AACAGGACTGAAACGTTGGC+AGG | - | chr8.2:14468883-14468902 | MS.gene62452:intron | 50.0% | |
| ACAGGACTGAAACGTTGGCA+GGG | - | chr8.2:14468884-14468903 | MS.gene62452:intron | 50.0% | |
| CAGGATGGAAAAGTGGAGAC+TGG | - | chr8.2:14469061-14469080 | MS.gene62452:CDS | 50.0% | |
| CCTTCTCTCGGAGGAAGAAA+AGG | + | chr8.2:14469359-14469378 | None:intergenic | 50.0% | |
| TCCACTAACGTGCCAATTCC+AGG | - | chr8.2:14468630-14468649 | MS.gene62452:intron | 50.0% | |
| TCTGGAGGAGATTGGATGTG+TGG | - | chr8.2:14468766-14468785 | MS.gene62452:intron | 50.0% | |
| TCTTCCTCCGAGAGAAGGAT+AGG | - | chr8.2:14469361-14469380 | MS.gene62452:intron | 50.0% | |
| ! | AGGAAAATGAGCTGGTCTGG+AGG | - | chr8.2:14468751-14468770 | MS.gene62452:intron | 50.0% |
| ! | CCTTTTCTTCCTCCGAGAGA+AGG | - | chr8.2:14469356-14469375 | MS.gene62452:intron | 50.0% |
| ! | GGTAACATGGTGAGTTCTGG+AGG | - | chr8.2:14469012-14469031 | MS.gene62452:intron | 50.0% |
| !! | CAGTCTCCACTTTTCCATCC+TGG | + | chr8.2:14469063-14469082 | None:intergenic | 50.0% |
| !! | GTCTCCACTTTTCCATCCTG+GGG | + | chr8.2:14469061-14469080 | None:intergenic | 50.0% |
| !! | TCTCCACTTTTCCATCCTGG+GGG | + | chr8.2:14469060-14469079 | None:intergenic | 50.0% |
| ACTGTAGTTCTCCCCCAGGA+TGG | - | chr8.2:14469046-14469065 | MS.gene62452:CDS | 55.0% | |
| CAGGACTGAAACGTTGGCAG+GGG | - | chr8.2:14468885-14468904 | MS.gene62452:intron | 55.0% | |
| GCCTGGAATTGGCACGTTAG+TGG | + | chr8.2:14468634-14468653 | None:intergenic | 55.0% | |
| GGGGGTAACATGGTGAGTTC+TGG | - | chr8.2:14469009-14469028 | MS.gene62452:intron | 55.0% | |
| GGTCAGGGCCTCCATACTTT+GGG | + | chr8.2:14468846-14468865 | None:intergenic | 55.0% | |
| GTGGAGACTGGATTTGCCCT+AGG | - | chr8.2:14469073-14469092 | MS.gene62452:CDS | 55.0% | |
| TCAGACTGTAGTTCTCCCCC+AGG | - | chr8.2:14469042-14469061 | MS.gene62452:CDS | 55.0% | |
| TCTCCCCCAGGATGGAAAAG+TGG | - | chr8.2:14469054-14469073 | MS.gene62452:CDS | 55.0% | |
| ! | TGAGCTGGTCTGGAGGAGAT+TGG | - | chr8.2:14468758-14468777 | MS.gene62452:intron | 55.0% |
| CTGAAACGTTGGCAGGGGAC+TGG | - | chr8.2:14468890-14468909 | MS.gene62452:intron | 60.0% | |
| GGGTCAGGGCCTCCATACTT+TGG | + | chr8.2:14468847-14468866 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 14468154 | 14469969 | 14468154 | ID=MS.gene62452 |
| chr8.2 | mRNA | 14468154 | 14469969 | 14468154 | ID=MS.gene62452.t1;Parent=MS.gene62452 |
| chr8.2 | exon | 14469942 | 14469969 | 14469942 | ID=MS.gene62452.t1.exon1;Parent=MS.gene62452.t1 |
| chr8.2 | CDS | 14469942 | 14469969 | 14469942 | ID=cds.MS.gene62452.t1;Parent=MS.gene62452.t1 |
| chr8.2 | exon | 14469816 | 14469870 | 14469816 | ID=MS.gene62452.t1.exon2;Parent=MS.gene62452.t1 |
| chr8.2 | CDS | 14469816 | 14469870 | 14469816 | ID=cds.MS.gene62452.t1;Parent=MS.gene62452.t1 |
| chr8.2 | exon | 14469029 | 14469370 | 14469029 | ID=MS.gene62452.t1.exon3;Parent=MS.gene62452.t1 |
| chr8.2 | CDS | 14469029 | 14469370 | 14469029 | ID=cds.MS.gene62452.t1;Parent=MS.gene62452.t1 |
| chr8.2 | exon | 14468154 | 14468247 | 14468154 | ID=MS.gene62452.t1.exon4;Parent=MS.gene62452.t1 |
| chr8.2 | CDS | 14468154 | 14468247 | 14468154 | ID=cds.MS.gene62452.t1;Parent=MS.gene62452.t1 |
| Gene Sequence |
| Protein sequence |
