AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene63734

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene63734.t1 MTR_2g076200 97.581 372 8 1 1 372 1 371 0.0 757
MS.gene63734.t1 MTR_2g076210 75.335 373 82 5 4 372 1 367 0.0 560
MS.gene63734.t1 MTR_2g020280 51.316 380 156 5 20 372 16 393 8.56e-135 390
MS.gene63734.t1 MTR_8g077195 51.667 360 144 3 43 372 53 412 1.95e-127 372
MS.gene63734.t1 MTR_5g020580 50.276 362 148 2 43 372 55 416 1.48e-126 370
MS.gene63734.t1 MTR_1g098790 48.564 383 146 6 40 372 50 431 2.83e-121 357
MS.gene63734.t1 MTR_1g022370 50.992 353 150 7 43 372 70 422 7.72e-121 356
MS.gene63734.t1 MTR_1g088960 50.838 358 143 6 43 372 50 402 2.40e-120 354
MS.gene63734.t1 MTR_2g007930 48.404 376 146 8 43 372 54 427 1.41e-117 348
MS.gene63734.t1 MTR_2g020280 53.378 296 109 5 104 372 1 294 7.87e-104 308
MS.gene63734.t1 MTR_8g077620 45.690 348 161 10 36 363 45 384 1.46e-87 270
MS.gene63734.t1 MTR_8g077675 40.659 364 173 8 36 365 41 395 1.18e-78 247
MS.gene63734.t1 MTR_8g077650 39.521 334 156 11 50 364 22 328 5.11e-58 192
MS.gene63734.t1 MTR_8g077640 38.793 348 128 7 42 362 94 383 8.77e-56 187
MS.gene63734.t1 MTR_1g023800 48.980 98 50 0 41 138 50 147 4.60e-28 108
MS.gene63734.t1 MTR_0210s0010 38.372 86 47 1 86 171 9 88 2.04e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene63734.t1 AT1G53320 71.504 379 101 3 1 372 1 379 0.0 542
MS.gene63734.t1 AT2G47900 49.300 357 152 5 43 372 52 406 2.80e-123 362
MS.gene63734.t1 AT2G47900 49.300 357 152 5 43 372 52 406 2.80e-123 362
MS.gene63734.t1 AT2G47900 49.162 358 152 5 43 372 52 407 3.72e-123 361
MS.gene63734.t1 AT2G18280 50.716 349 150 4 43 372 48 393 8.99e-120 352
MS.gene63734.t1 AT2G18280 50.716 349 150 4 43 372 48 393 8.99e-120 352
MS.gene63734.t1 AT1G76900 45.297 404 146 7 41 372 55 455 5.34e-117 347
MS.gene63734.t1 AT1G76900 45.297 404 146 7 41 372 55 455 5.34e-117 347
MS.gene63734.t1 AT1G76900 45.297 404 146 7 41 372 55 455 5.34e-117 347
MS.gene63734.t1 AT1G25280 47.680 388 144 8 43 372 59 445 2.05e-115 343
MS.gene63734.t1 AT1G47270 47.091 361 158 8 36 372 37 388 1.23e-110 328
MS.gene63734.t1 AT1G47270 47.091 361 158 8 36 372 61 412 1.86e-110 329
MS.gene63734.t1 AT1G47270 47.091 361 158 8 36 372 62 413 1.94e-110 329
MS.gene63734.t1 AT3G06380 46.341 369 162 7 31 372 21 380 3.73e-109 325
MS.gene63734.t1 AT1G43640 46.194 381 154 7 40 372 52 429 6.08e-109 326
MS.gene63734.t1 AT5G18680 48.442 353 157 7 43 372 39 389 3.23e-107 320
MS.gene63734.t1 AT1G43640 46.995 366 143 7 55 372 1 363 5.51e-106 316
MS.gene63734.t1 AT5G18680 49.141 291 124 6 104 372 9 297 6.46e-87 265
MS.gene63734.t1 AT3G06380 47.099 293 120 6 106 372 5 288 1.84e-84 258
MS.gene63734.t1 AT1G25280 46.642 268 85 7 162 372 1 267 4.65e-72 226
MS.gene63734.t1 AT1G25280 46.642 268 85 7 162 372 1 267 4.65e-72 226
MS.gene63734.t1 AT1G61940 47.126 87 46 0 46 132 1 87 1.58e-22 95.9
MS.gene63734.t1 AT1G61940 47.541 61 32 0 46 106 1 61 1.16e-13 70.5

Find 111 sgRNAs with CRISPR-Local

Find 306 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACGATGGTTTGGCACCATTA+TGG 0.220136 2.1:+23566747 None:intergenic
CTTCACAGCTCGGACTTTCT+TGG 0.231255 2.1:-23566803 MS.gene63734:intron
GCAGCCCTTGTCCGCCTTCC+AGG 0.253322 2.1:-23566285 MS.gene63734:CDS
GCGATATAACATACTCAGTA+TGG 0.267086 2.1:+23567702 None:intergenic
CTTTCCCTCCCGGTTGGCTT+TGG 0.300866 2.1:+23566375 None:intergenic
CTTCAAAAGGTTGAACTTGT+AGG 0.307145 2.1:+23566643 None:intergenic
CGATGGTTTGGCACCATTAT+GGG 0.310618 2.1:+23566748 None:intergenic
GTTTAGTACCAAAGCTAGTT+AGG 0.325857 2.1:+23566249 None:intergenic
AGGCGGCGGCGCTGGTGAAT+CGG 0.332769 2.1:-23570527 MS.gene63734:CDS
GCCATTTGCCTAACTAGCTT+TGG 0.333355 2.1:-23566257 MS.gene63734:CDS
TGGCACCATTATGGGGTGGC+TGG 0.351579 2.1:+23566756 None:intergenic
GGCAAAACGCCGGCTAGCTC+TGG 0.355300 2.1:+23566721 None:intergenic
TTGAGGGCTTATCTGTTTGC+TGG 0.356555 2.1:+23566700 None:intergenic
TCGCCAGCATTCACAGATAA+AGG 0.367850 2.1:-23567764 MS.gene63734:intron
CAAATTCTCAAAATCCTTCA+AGG 0.380849 2.1:-23570587 MS.gene63734:CDS
AACTAGCTTTGGTACTAAAC+TGG 0.385771 2.1:-23566246 MS.gene63734:CDS
GACCGGAGAGGCGGCGGCGC+TGG 0.390452 2.1:-23570535 MS.gene63734:CDS
AACAGTACTTACATGATGTA+AGG 0.402699 2.1:+23569281 None:intergenic
TGCTGGTGCTTGAACTTTCA+TGG 0.404252 2.1:-23566449 MS.gene63734:CDS
TCTTCATCTCCTTTCCCTCC+CGG 0.407140 2.1:+23566365 None:intergenic
TATTAGCAGCTAGAAGATAT+AGG 0.409814 2.1:-23567733 MS.gene63734:CDS
GAAACGGTTCTCCTCCAGTT+TGG 0.411512 2.1:-23566344 MS.gene63734:CDS
CGTCCCCTACTTTACCAAAC+TGG 0.415882 2.1:+23566330 None:intergenic
TACTGTGGACCAAAGCCAAC+CGG 0.423752 2.1:-23566384 MS.gene63734:CDS
TTGGCCCTCTCGACTTCAAA+AGG 0.424052 2.1:+23566630 None:intergenic
GATAGATTGAACTTCCTTGA+AGG 0.433216 2.1:+23570573 None:intergenic
CACCAGCGCCGCCGCCTCTC+CGG 0.433726 2.1:+23570533 None:intergenic
AAAGTTTCCTGTCTCATCAA+TGG 0.435431 2.1:-23566588 MS.gene63734:CDS
AGCTCTGGCACACGATGGTT+TGG 0.442139 2.1:+23566736 None:intergenic
ATACCTTCACCATGGACTAT+AGG 0.445930 2.1:-23566307 MS.gene63734:CDS
TCCTCCAGTTTGGTAAAGTA+GGG 0.446113 2.1:-23566334 MS.gene63734:CDS
CAAAGCCAACCGGGAGGGAA+AGG 0.450993 2.1:-23566374 MS.gene63734:CDS
CTTGTGCCTGCGTGTGTAAA+CGG 0.451934 2.1:-23570399 MS.gene63734:CDS
CTCCTCCAGTTTGGTAAAGT+AGG 0.453347 2.1:-23566335 MS.gene63734:CDS
GGCATGAGCATTTGCAATGC+TGG 0.463812 2.1:-23566466 MS.gene63734:CDS
GCCGATGACCGGAGAGGCGG+CGG 0.466111 2.1:-23570541 MS.gene63734:CDS
AAACGCCTGGAAGGCGGACA+AGG 0.466204 2.1:+23566280 None:intergenic
TCCGCTTTATAAGACAATGA+TGG 0.469186 2.1:+23569338 None:intergenic
ATTATCTCTGCAAGGAGATC+CGG 0.469997 2.1:+23570475 None:intergenic
GCCTCTCCGGTCATCGGCGA+CGG 0.470591 2.1:+23570546 None:intergenic
GACAGCCAGCCACCCCATAA+TGG 0.478762 2.1:-23566761 MS.gene63734:CDS
ACCAAAGCTAGTTAGGCAAA+TGG 0.480991 2.1:+23566256 None:intergenic
AAGTTTCCTGTCTCATCAAT+GGG 0.481200 2.1:-23566587 MS.gene63734:CDS
CCGCTTTATAAGACAATGAT+GGG 0.481752 2.1:+23569339 None:intergenic
CATCTCCTTTCCCTCCCGGT+TGG 0.483246 2.1:+23566369 None:intergenic
AGTGAGCACATCATCCTCCT+TGG 0.487846 2.1:+23566611 None:intergenic
TGCTGGTAACTTCGAGGCAG+GGG 0.489666 2.1:-23566672 MS.gene63734:CDS
GCCGCCGCCTCTCCGGTCAT+CGG 0.501713 2.1:+23570540 None:intergenic
TTAGGCAAATGGCAAACGCC+TGG 0.502545 2.1:+23566267 None:intergenic
CTTTCACCCATTGATGAGAC+AGG 0.505376 2.1:+23566581 None:intergenic
CAAGGAAGTAATGCTTATGT+TGG 0.506103 2.1:-23567659 MS.gene63734:CDS
ATGATGTAAGGGCGAGATAG+AGG 0.507033 2.1:+23569293 None:intergenic
CTTTCAGCTGGTTGCTACTG+TGG 0.512635 2.1:-23566399 MS.gene63734:CDS
ACGGTGTGGCCACTGTTCCT+CGG 0.514758 2.1:+23570435 None:intergenic
CCTGCTGGTAACTTCGAGGC+AGG 0.517968 2.1:-23566674 MS.gene63734:CDS
ATCAGTGAAGAACTTTCAGC+TGG 0.522886 2.1:-23566411 MS.gene63734:CDS
TGCAAATGCTCATGCCACCT+TGG 0.523848 2.1:+23566473 None:intergenic
CCCATCATTGTCTTATAAAG+CGG 0.524392 2.1:-23569339 MS.gene63734:CDS
TGGGGAAGATCACGTGGTCC+TGG 0.524705 2.1:+23569358 None:intergenic
AAGTTACCAGCAGGAACTTG+AGG 0.529054 2.1:+23566683 None:intergenic
ATGCTTATGTTGGCAAGCTA+AGG 0.535171 2.1:-23567649 MS.gene63734:intron
CTCGTTTAATTATCTCTGCA+AGG 0.537679 2.1:+23570467 None:intergenic
ACTACACATGTCGTTGATGA+AGG 0.539248 2.1:-23570623 None:intergenic
CATCGTGTGCCAGAGCTAGC+CGG 0.539800 2.1:-23566730 MS.gene63734:CDS
ATAAGCCCTCAAGTTCCTGC+TGG 0.547760 2.1:-23566689 MS.gene63734:CDS
AGTTACCAGCAGGAACTTGA+GGG 0.551679 2.1:+23566684 None:intergenic
CTGCTGGTAACTTCGAGGCA+GGG 0.552365 2.1:-23566673 MS.gene63734:CDS
TCTACACCGTCGCCGATGAC+CGG 0.552514 2.1:-23570552 MS.gene63734:CDS
AATCGGCGGATGGAACTGAT+TGG 0.555165 2.1:-23570510 MS.gene63734:CDS
AGGACCTGTTTAAGACAAGA+AGG 0.556474 2.1:+23570316 None:intergenic
GATGGTTTGGCACCATTATG+GGG 0.557500 2.1:+23566749 None:intergenic
GGCGAGATAGAGGTAAAATG+TGG 0.568448 2.1:+23569303 None:intergenic
GCTGTCGTAAATTGTGAAGT+TGG 0.573043 2.1:+23566778 None:intergenic
CAAGGGCTGCCTATAGTCCA+TGG 0.582759 2.1:+23566298 None:intergenic
GGCGCTGGTGAATCGGCGGA+TGG 0.582880 2.1:-23570520 MS.gene63734:CDS
AGGGAAAGGAGATGAAGAAA+CGG 0.585294 2.1:-23566360 MS.gene63734:CDS
AACGCCTGGAAGGCGGACAA+GGG 0.585668 2.1:+23566281 None:intergenic
TCTGTTTGCTGGCAAAACGC+CGG 0.592503 2.1:+23566711 None:intergenic
AGTTCCTGCTGGTAACTTCG+AGG 0.598795 2.1:-23566678 MS.gene63734:CDS
CGGCGGCGCTGGTGAATCGG+CGG 0.599436 2.1:-23570524 MS.gene63734:CDS
GCAAATGGCAAACGCCTGGA+AGG 0.600612 2.1:+23566271 None:intergenic
TAAACGAGTCGACGTTGCCG+AGG 0.602384 2.1:-23570452 MS.gene63734:CDS
TGATTGGTCTACGATGCTAC+CGG 0.604252 2.1:-23570494 MS.gene63734:CDS
ACAGTACTTACATGATGTAA+GGG 0.604759 2.1:+23569282 None:intergenic
CCTGCCTCGAAGTTACCAGC+AGG 0.604926 2.1:+23566674 None:intergenic
TCGACGTTGCCGAGGAACAG+TGG 0.607977 2.1:-23570444 MS.gene63734:CDS
CGATATAACATACTCAGTAT+GGG 0.610140 2.1:+23567703 None:intergenic
GTCGCCGATGACCGGAGAGG+CGG 0.611114 2.1:-23570544 MS.gene63734:CDS
ACTGTGGACCAAAGCCAACC+GGG 0.622254 2.1:-23566383 MS.gene63734:CDS
AATGGCAAACGCCTGGAAGG+CGG 0.622747 2.1:+23566274 None:intergenic
CTGCCTATAGTCCATGGTGA+AGG 0.631313 2.1:+23566304 None:intergenic
CCTCCAGTTTGGTAAAGTAG+GGG 0.636441 2.1:-23566333 MS.gene63734:CDS
TGGACCAAAGCCAACCGGGA+GGG 0.641249 2.1:-23566379 MS.gene63734:CDS
CAATGATGGGGAAGATCACG+TGG 0.646996 2.1:+23569352 None:intergenic
CTTTCATGGTCGTGTGACAG+TGG 0.649357 2.1:-23566435 MS.gene63734:CDS
TCTTGAAGAACAAAGCTCCA+AGG 0.652245 2.1:-23566490 MS.gene63734:CDS
GTTAAGTCACCTCAACGTAA+CGG 0.655976 2.1:-23570352 MS.gene63734:CDS
CCCCTACTTTACCAAACTGG+AGG 0.658277 2.1:+23566333 None:intergenic
GGTTTGGCACCATTATGGGG+TGG 0.668160 2.1:+23566752 None:intergenic
CGGCTAGCTCTGGCACACGA+TGG 0.676984 2.1:+23566731 None:intergenic
TGAAGTCGAGAGGGCCAAGG+AGG 0.682719 2.1:-23566625 MS.gene63734:CDS
CGCTTTATAAGACAATGATG+GGG 0.686571 2.1:+23569340 None:intergenic
GTGATTGTGCCGTTACGTTG+AGG 0.690998 2.1:+23570343 None:intergenic
AGGGGACGATACCTTCACCA+TGG 0.697116 2.1:-23566315 MS.gene63734:CDS
GCAGCTAGAAGATATAGGTG+TGG 0.701333 2.1:-23567728 MS.gene63734:CDS
TGAAGAACAAAGCTCCAAGG+TGG 0.704573 2.1:-23566487 MS.gene63734:CDS
TCTCCACCGTTTACACACGC+AGG 0.710172 2.1:+23570393 None:intergenic
GATGCTGACGACTTATCACA+AGG 0.713430 2.1:-23567677 MS.gene63734:CDS
ACCGTCGCCGATGACCGGAG+AGG 0.724645 2.1:-23570547 MS.gene63734:CDS
GTGCCTGCGTGTGTAAACGG+TGG 0.728961 2.1:-23570396 MS.gene63734:CDS
GTGGACCAAAGCCAACCGGG+AGG 0.734579 2.1:-23566380 MS.gene63734:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTTCATTAATATATAAAG+GGG - chr2.1:23568233-23568252 MS.gene63734:intron 10.0%
!! GAAATTTCATTAATATATAA+AGG - chr2.1:23568231-23568250 MS.gene63734:intron 10.0%
!!! CAAAAATTTCATTTTTTTTT+TGG - chr2.1:23566562-23566581 MS.gene63734:CDS 10.0%
!!! TTTTTTTTGGTTTAATTTAT+TGG - chr2.1:23566575-23566594 MS.gene63734:CDS 10.0%
!! AAAACCATTAATTGAATTTA+TGG - chr2.1:23569978-23569997 MS.gene63734:intron 15.0%
!! ATTCACTATAGTTTAATATA+AGG + chr2.1:23569747-23569766 None:intergenic 15.0%
!! ATTGATTATGAGATTAATTA+TGG - chr2.1:23566742-23566761 MS.gene63734:CDS 15.0%
!! TATACTAATTTAGTAATTGT+AGG - chr2.1:23568485-23568504 MS.gene63734:intron 15.0%
!! TTAACTAATTTAGTAATTGT+AGG - chr2.1:23568540-23568559 MS.gene63734:intron 15.0%
!!! AAACAATGATTTTTGTTTTT+TGG - chr2.1:23566639-23566658 MS.gene63734:CDS 15.0%
!!! TTTTTTTTTGCCTTTTTTTA+TGG - chr2.1:23567604-23567623 MS.gene63734:intron 15.0%
!! AATAATACCAAAATCAATTC+TGG - chr2.1:23567294-23567313 MS.gene63734:intron 20.0%
!! AATCAGCAATTTATAATTGT+CGG + chr2.1:23568974-23568993 None:intergenic 20.0%
!! ACATTCTTATTATGTAAATC+TGG - chr2.1:23568458-23568477 MS.gene63734:intron 20.0%
!! ATTTACTGTAAACATATGTT+TGG - chr2.1:23568807-23568826 MS.gene63734:intron 20.0%
!! CAACCATAAGAAAAATAAAA+AGG - chr2.1:23569526-23569545 MS.gene63734:intron 20.0%
!! GAGATAAAATGATTTATGTT+TGG - chr2.1:23567137-23567156 MS.gene63734:intron 20.0%
!! TTAGTTTAAATCCAGTAATA+AGG - chr2.1:23566992-23567011 MS.gene63734:intron 20.0%
!! TTGACCATAAATTCAATTAA+TGG + chr2.1:23569985-23570004 None:intergenic 20.0%
!!! AAAAATGAAATTTTTGTTGC+AGG + chr2.1:23566558-23566577 None:intergenic 20.0%
!!! ATTATTTTTGCATTTAAGCA+TGG - chr2.1:23568344-23568363 MS.gene63734:intron 20.0%
!!! ATTGATTTTGGTATTATTAG+CGG + chr2.1:23567292-23567311 None:intergenic 20.0%
!!! CAAGAGTTTTTGTATAAATA+AGG + chr2.1:23569839-23569858 None:intergenic 20.0%
!!! CTTTGATCTTAGATATTTTT+AGG + chr2.1:23569648-23569667 None:intergenic 20.0%
!!! GTTCCTTTTTATTTTTCTTA+TGG + chr2.1:23569532-23569551 None:intergenic 20.0%
!!! TAATAAGGTGTTTGTTAAAT+GGG - chr2.1:23567007-23567026 MS.gene63734:intron 20.0%
!!! TACATTTTCTTTGATGTTTT+GGG - chr2.1:23569017-23569036 MS.gene63734:intron 20.0%
!!! TACTTAATTCTATCATCTTT+TGG - chr2.1:23568377-23568396 MS.gene63734:intron 20.0%
!!! TGATTAACATTTTCTTCAAT+TGG - chr2.1:23567376-23567395 MS.gene63734:intron 20.0%
!!! TTACATTTTCTTTGATGTTT+TGG - chr2.1:23569016-23569035 MS.gene63734:intron 20.0%
!!! TTTTATTTTTCTTATGGTTG+AGG + chr2.1:23569526-23569545 None:intergenic 20.0%
!!! TTTTTATCCTTTTTGTTGAA+TGG - chr2.1:23569303-23569322 MS.gene63734:CDS 20.0%
! AATATATTTGTCAAACCACA+TGG - chr2.1:23567857-23567876 MS.gene63734:intron 25.0%
! ACAAATCATAGTATGCATTT+AGG + chr2.1:23568310-23568329 None:intergenic 25.0%
! AGTTGCAGTTTAATAGAATT+TGG - chr2.1:23566965-23566984 MS.gene63734:intron 25.0%
! ATGATAGAATTAAGTAACCA+TGG + chr2.1:23568373-23568392 None:intergenic 25.0%
! ATGATGATAGTTAGTACAAA+AGG - chr2.1:23568930-23568949 MS.gene63734:intron 25.0%
! ATTCAGTGTTAGTAGTAAAA+GGG - chr2.1:23566797-23566816 MS.gene63734:CDS 25.0%
! TAAAAGGATATCATACAACT+CGG + chr2.1:23567652-23567671 None:intergenic 25.0%
! TGTTAAATGGGTATTAGTAT+TGG - chr2.1:23567019-23567038 MS.gene63734:intron 25.0%
! TTAATGTAAGATACTGTCAT+TGG - chr2.1:23569333-23569352 MS.gene63734:CDS 25.0%
! TTAGTAGTAAAAGGGTTTAT+TGG - chr2.1:23566805-23566824 MS.gene63734:intron 25.0%
! TTCTTATTATGTAAATCTGG+AGG - chr2.1:23568461-23568480 MS.gene63734:intron 25.0%
! TTGAGTGTAAAAATCACATT+AGG - chr2.1:23567194-23567213 MS.gene63734:intron 25.0%
! TTGTATAAATAAGGCTAAGA+GGG + chr2.1:23569830-23569849 None:intergenic 25.0%
! TTTAACAAACACCTTATTAC+TGG + chr2.1:23567006-23567025 None:intergenic 25.0%
! TTTCAACCATCCATAAAAAA+AGG + chr2.1:23567617-23567636 None:intergenic 25.0%
! TTTGTATAAATAAGGCTAAG+AGG + chr2.1:23569831-23569850 None:intergenic 25.0%
!! AAAGGAACTTACTCTTTTAA+AGG - chr2.1:23569544-23569563 MS.gene63734:intron 25.0%
!! AAATGCATACTATGATTTGT+TGG - chr2.1:23568310-23568329 MS.gene63734:intron 25.0%
!! AAGCTTATCTTTTCTTATTG+TGG + chr2.1:23568113-23568132 None:intergenic 25.0%
!! AGCTTATCTTTTCTTATTGT+GGG + chr2.1:23568112-23568131 None:intergenic 25.0%
!! ATATCCTTTTATCTTCCTAT+GGG - chr2.1:23567661-23567680 MS.gene63734:CDS 25.0%
!! GTAATAAGGTGTTTGTTAAA+TGG - chr2.1:23567006-23567025 MS.gene63734:intron 25.0%
!! TTAACATTTTCTTCAATTGG+TGG - chr2.1:23567379-23567398 MS.gene63734:intron 25.0%
!!! AATGAGACATAAGTTGATTT+CGG - chr2.1:23567426-23567445 MS.gene63734:intron 25.0%
!!! GAAACATTTTATTTCTTTCC+TGG + chr2.1:23569261-23569280 None:intergenic 25.0%
!!! GATTTTAAAAATCCAAAGCA+CGG - chr2.1:23569675-23569694 MS.gene63734:intron 25.0%
!!! GGAGGAATACTTTTTTTTTA+TGG - chr2.1:23567315-23567334 MS.gene63734:intron 25.0%
!!! TTAATTAGGTTTTTGTTGTG+AGG - chr2.1:23566835-23566854 MS.gene63734:intron 25.0%
!!! TTGATTTTGGTATTATTAGC+GGG + chr2.1:23567291-23567310 None:intergenic 25.0%
!!! TTTTTGCCTTTTTTTATGGA+TGG - chr2.1:23567608-23567627 MS.gene63734:intron 25.0%
AAAACTCTTGATGTGTATGT+TGG - chr2.1:23569849-23569868 MS.gene63734:intron 30.0%
AAACAACTCTCTTTCAATCA+TGG + chr2.1:23568855-23568874 None:intergenic 30.0%
AAACCAAACTAGTTAGGAAT+AGG + chr2.1:23567977-23567996 None:intergenic 30.0%
AAAGGAATATTCACTACTAC+AGG + chr2.1:23568705-23568724 None:intergenic 30.0%
AACACTAAACCAAACTAGTT+AGG + chr2.1:23567983-23568002 None:intergenic 30.0%
AACAGTACTTACATGATGTA+AGG + chr2.1:23567573-23567592 None:intergenic 30.0%
AATACAAACCAGACATTTAC+AGG + chr2.1:23567405-23567424 None:intergenic 30.0%
AATACCAAAATCAATTCTGG+AGG - chr2.1:23567297-23567316 MS.gene63734:intron 30.0%
ACAAAAAGTTATTTGCTTCC+AGG - chr2.1:23569240-23569259 MS.gene63734:intron 30.0%
ACAGTACTTACATGATGTAA+GGG + chr2.1:23567572-23567591 None:intergenic 30.0%
ACTACTACAGGAAAAGAAAA+AGG + chr2.1:23568693-23568712 None:intergenic 30.0%
AGAGAATTAGAACTTTGTGT+TGG - chr2.1:23569455-23569474 MS.gene63734:intron 30.0%
AGTGAAAACCTACTTTCAAA+AGG + chr2.1:23566682-23566701 None:intergenic 30.0%
AGTGTAAAAATCACATTAGG+AGG - chr2.1:23567197-23567216 MS.gene63734:intron 30.0%
ATGAATACAGATTTCAGCAT+GGG + chr2.1:23569902-23569921 None:intergenic 30.0%
ATGAGTAAATTGAACAAGGT+AGG + chr2.1:23567954-23567973 None:intergenic 30.0%
ATTCCTTTGTAGTAGTTATG+TGG - chr2.1:23568717-23568736 MS.gene63734:intron 30.0%
CAAATTCTCAAAATCCTTCA+AGG - chr2.1:23566264-23566283 MS.gene63734:CDS 30.0%
CACCAATATTATGTAGCTTT+GGG + chr2.1:23569789-23569808 None:intergenic 30.0%
CATTCAGTGTTAGTAGTAAA+AGG - chr2.1:23566796-23566815 MS.gene63734:CDS 30.0%
CGATATAACATACTCAGTAT+GGG + chr2.1:23569151-23569170 None:intergenic 30.0%
CTACTAAGAAATATGAGATG+CGG + chr2.1:23568408-23568427 None:intergenic 30.0%
GGTTAATTAGTGAGTGATTT+GGG - chr2.1:23566864-23566883 MS.gene63734:intron 30.0%
GGTTTAGTGTTGTGAAATAT+CGG - chr2.1:23567992-23568011 MS.gene63734:intron 30.0%
GTGAAAACCTACTTTCAAAA+GGG + chr2.1:23566681-23566700 None:intergenic 30.0%
GTTGATCGTATAAAGTCTAA+TGG - chr2.1:23567691-23567710 MS.gene63734:CDS 30.0%
TACTGTAAACATATGTTTGG+TGG - chr2.1:23568810-23568829 MS.gene63734:intron 30.0%
TAGGATGAGTAAATTGAACA+AGG + chr2.1:23567958-23567977 None:intergenic 30.0%
TATGAATACAGATTTCAGCA+TGG + chr2.1:23569903-23569922 None:intergenic 30.0%
TATTAGCAGCTAGAAGATAT+AGG - chr2.1:23569118-23569137 MS.gene63734:intron 30.0%
TCACCAATATTATGTAGCTT+TGG + chr2.1:23569790-23569809 None:intergenic 30.0%
TCCAATTCTTGAGCAATTAA+TGG - chr2.1:23568774-23568793 MS.gene63734:intron 30.0%
TCCATTAATTGCTCAAGAAT+TGG + chr2.1:23568778-23568797 None:intergenic 30.0%
TGGTTAATTAGTGAGTGATT+TGG - chr2.1:23566863-23566882 MS.gene63734:intron 30.0%
TTATTGGTGAGTGGTTAATT+AGG - chr2.1:23566821-23566840 MS.gene63734:intron 30.0%
! AATGTTTTCAGAGATTGAAG+TGG - chr2.1:23568176-23568195 MS.gene63734:intron 30.0%
! CTTCAAGTTAGAATCAATTC+TGG - chr2.1:23567240-23567259 MS.gene63734:intron 30.0%
! GATATCCTTTTATCTTCCTA+TGG - chr2.1:23567660-23567679 MS.gene63734:CDS 30.0%
! TATCCTTTTATCTTCCTATG+GGG - chr2.1:23567662-23567681 MS.gene63734:CDS 30.0%
! TTTGAAAGTAGGTTTTCACT+TGG - chr2.1:23566682-23566701 MS.gene63734:CDS 30.0%
! TTTTCCTTCTTGTCTTAAAC+AGG - chr2.1:23566531-23566550 MS.gene63734:CDS 30.0%
!! ACATCATGTAAGTACTGTTT+TGG - chr2.1:23567574-23567593 MS.gene63734:intron 30.0%
!! ATGAGACATAAGTTGATTTC+GGG - chr2.1:23567427-23567446 MS.gene63734:intron 30.0%
!! TATTCCTCCAGAATTGATTT+TGG + chr2.1:23567304-23567323 None:intergenic 30.0%
!!! GATATTTTAGCTTTCCGTTA+CGG - chr2.1:23568057-23568076 MS.gene63734:intron 30.0%
!!! GTAGTTTTATGCGTTTGAAA+TGG - chr2.1:23567047-23567066 MS.gene63734:intron 30.0%
AAAATTGCTGATCCTGATAC+AGG - chr2.1:23568633-23568652 MS.gene63734:intron 35.0%
AAAGTTTCCTGTCTCATCAA+TGG - chr2.1:23570263-23570282 MS.gene63734:intron 35.0%
AAGATGGAAGAATAGTGTTC+AGG - chr2.1:23567072-23567091 MS.gene63734:intron 35.0%
AAGTTTCCTGTCTCATCAAT+GGG - chr2.1:23570264-23570283 MS.gene63734:intron 35.0%
AGAATAGTGTTCAGGAATCA+AGG - chr2.1:23567080-23567099 MS.gene63734:intron 35.0%
AGATCTGCAAAACATCTCAT+TGG - chr2.1:23567730-23567749 MS.gene63734:CDS 35.0%
CAACCACATAACTACTACAA+AGG + chr2.1:23568723-23568742 None:intergenic 35.0%
CAAGGAAGTAATGCTTATGT+TGG - chr2.1:23569192-23569211 MS.gene63734:intron 35.0%
CAAGTTAGAATCAATTCTGG+AGG - chr2.1:23567243-23567262 MS.gene63734:intron 35.0%
CACCCAAAGCTACATAATAT+TGG - chr2.1:23569784-23569803 MS.gene63734:intron 35.0%
CATCCTATTCCTAACTAGTT+TGG - chr2.1:23567971-23567990 MS.gene63734:intron 35.0%
CATCTCATTGGTCAAATGTA+TGG - chr2.1:23567742-23567761 MS.gene63734:CDS 35.0%
CCCATCATTGTCTTATAAAG+CGG - chr2.1:23567512-23567531 MS.gene63734:intron 35.0%
CCGCTTTATAAGACAATGAT+GGG + chr2.1:23567515-23567534 None:intergenic 35.0%
CGCTTTATAAGACAATGATG+GGG + chr2.1:23567514-23567533 None:intergenic 35.0%
CTCGTTTAATTATCTCTGCA+AGG + chr2.1:23566387-23566406 None:intergenic 35.0%
CTTCAAAAGGTTGAACTTGT+AGG + chr2.1:23570211-23570230 None:intergenic 35.0%
GATAGATTGAACTTCCTTGA+AGG + chr2.1:23566281-23566300 None:intergenic 35.0%
GCGATATAACATACTCAGTA+TGG + chr2.1:23569152-23569171 None:intergenic 35.0%
GTAGTGTCTTAATTTCAGAC+TGG - chr2.1:23566916-23566935 MS.gene63734:intron 35.0%
GTATGGCAAACATTACTTGT+GGG - chr2.1:23567759-23567778 MS.gene63734:CDS 35.0%
GTATTCATAGCTCATTAGCT+TGG - chr2.1:23569914-23569933 MS.gene63734:intron 35.0%
GTTTAGTACCAAAGCTAGTT+AGG + chr2.1:23570605-23570624 None:intergenic 35.0%
GTTTGTAACTGTGTGATTTG+TGG - chr2.1:23568871-23568890 MS.gene63734:intron 35.0%
TAAAAGGGTTTATTGGTGAG+TGG - chr2.1:23566812-23566831 MS.gene63734:intron 35.0%
TAATTCTCTGTTTCCTACCA+AGG + chr2.1:23569444-23569463 None:intergenic 35.0%
TATGGCAAACATTACTTGTG+GGG - chr2.1:23567760-23567779 MS.gene63734:CDS 35.0%
TCCGCTTTATAAGACAATGA+TGG + chr2.1:23567516-23567535 None:intergenic 35.0%
TGAAGACAATTCAGCAACTA+TGG + chr2.1:23570033-23570052 None:intergenic 35.0%
TGTATGGCAAACATTACTTG+TGG - chr2.1:23567758-23567777 MS.gene63734:CDS 35.0%
TGTCTTAATTTCAGACTGGT+GGG - chr2.1:23566920-23566939 MS.gene63734:intron 35.0%
TTGTTGAAGATGCAATGGAA+TGG - chr2.1:23566771-23566790 MS.gene63734:CDS 35.0%
TTTATGGTGGCTCAAAATGA+TGG - chr2.1:23568035-23568054 MS.gene63734:intron 35.0%
TTTCCTTTATCTGTGAATGC+TGG + chr2.1:23569093-23569112 None:intergenic 35.0%
! ATCCTTTTTGTTGAATGGCA+TGG - chr2.1:23569308-23569327 MS.gene63734:CDS 35.0%
! CATTTTGAGCCACCATAAAA+CGG + chr2.1:23568034-23568053 None:intergenic 35.0%
! GTCGATTGATAACACTAGTT+TGG - chr2.1:23568083-23568102 MS.gene63734:intron 35.0%
! TCAGATAGCAAGTCTTTTGA+TGG - chr2.1:23570294-23570313 MS.gene63734:intron 35.0%
! TCAGCAATTTTTCTAGACCT+AGG + chr2.1:23568624-23568643 None:intergenic 35.0%
! TGCGTTTGAAATGGAAAAGA+TGG - chr2.1:23567056-23567075 MS.gene63734:intron 35.0%
! TTTGCTTGTTGAAGATGCAA+TGG - chr2.1:23566766-23566785 MS.gene63734:CDS 35.0%
! TTTTCAGAGATTGAAGTGGA+AGG - chr2.1:23568180-23568199 MS.gene63734:intron 35.0%
!! AACTAGCTTTGGTACTAAAC+TGG - chr2.1:23570605-23570624 MS.gene63734:CDS 35.0%
!! ACAAAGAAGAGCTTTGTTGT+TGG - chr2.1:23567790-23567809 MS.gene63734:intron 35.0%
!! GATTAGACCCTTTTGAAAGT+AGG - chr2.1:23566671-23566690 MS.gene63734:CDS 35.0%
!! GTTTTTGTTGTGAGGATTGT+TGG - chr2.1:23566843-23566862 MS.gene63734:intron 35.0%
!! TATGTAGCTTTGGGTGTAAA+TGG + chr2.1:23569780-23569799 None:intergenic 35.0%
!! TGAGACATAAGTTGATTTCG+GGG - chr2.1:23567428-23567447 MS.gene63734:intron 35.0%
ACCAAAGCTAGTTAGGCAAA+TGG + chr2.1:23570598-23570617 None:intergenic 40.0%
AGCAAGTCATCTTGGAGTAT+TGG + chr2.1:23567912-23567931 None:intergenic 40.0%
AGGGAAAGGAGATGAAGAAA+CGG - chr2.1:23570491-23570510 MS.gene63734:CDS 40.0%
ATCAGTGAAGAACTTTCAGC+TGG - chr2.1:23570440-23570459 MS.gene63734:CDS 40.0%
ATGCTTATGTTGGCAAGCTA+AGG - chr2.1:23569202-23569221 MS.gene63734:intron 40.0%
ATGTTGGTCAACAAAGTTGC+TGG - chr2.1:23569865-23569884 MS.gene63734:intron 40.0%
ATTATCTCTGCAAGGAGATC+CGG + chr2.1:23566379-23566398 None:intergenic 40.0%
CACCATGCCATTCAACAAAA+AGG + chr2.1:23569313-23569332 None:intergenic 40.0%
CATGAGCAATGGAAGCTATT+TGG - chr2.1:23566894-23566913 MS.gene63734:intron 40.0%
GAGATAGCTTATGTAGACCT+AGG - chr2.1:23568604-23568623 MS.gene63734:intron 40.0%
GCTGTCGTAAATTGTGAAGT+TGG + chr2.1:23570076-23570095 None:intergenic 40.0%
GTACCCCATAGGAAGATAAA+AGG + chr2.1:23567668-23567687 None:intergenic 40.0%
GTAGTTATGTGGTTGTCACA+TGG - chr2.1:23568728-23568747 MS.gene63734:intron 40.0%
GTGTCTTAATTTCAGACTGG+TGG - chr2.1:23566919-23566938 MS.gene63734:intron 40.0%
GTTAAGTCACCTCAACGTAA+CGG - chr2.1:23566499-23566518 MS.gene63734:CDS 40.0%
TAAAGGGGAGATTTCATGAG+TGG - chr2.1:23568248-23568267 MS.gene63734:intron 40.0%
TATCAATCGACGAACCGTAA+CGG + chr2.1:23568074-23568093 None:intergenic 40.0%
TCCTCCAGTTTGGTAAAGTA+GGG - chr2.1:23570517-23570536 MS.gene63734:CDS 40.0%
TCTTACGTGTTTCTTCTGCT+TGG - chr2.1:23569279-23569298 MS.gene63734:intron 40.0%
TCTTGAAGAACAAAGCTCCA+AGG - chr2.1:23570361-23570380 MS.gene63734:CDS 40.0%
TGGGATATTTGCATGAGCAA+TGG - chr2.1:23566883-23566902 MS.gene63734:intron 40.0%
TTGACTGAAGCAAGTCATCT+TGG + chr2.1:23567920-23567939 None:intergenic 40.0%
! AACTTTGTGTTGGCACAATC+AGG - chr2.1:23569465-23569484 MS.gene63734:intron 40.0%
! ACTTTGTGTTGGCACAATCA+GGG - chr2.1:23569466-23569485 MS.gene63734:intron 40.0%
! AGGACCTGTTTAAGACAAGA+AGG + chr2.1:23566538-23566557 None:intergenic 40.0%
! ATACCTTCACCATGGACTAT+AGG - chr2.1:23570544-23570563 MS.gene63734:CDS 40.0%
! GACTTGCTTCAGTCAATGTA+TGG - chr2.1:23567924-23567943 MS.gene63734:intron 40.0%
!! ACTGGTGGGTTAATACTGTT+TGG - chr2.1:23566934-23566953 MS.gene63734:intron 40.0%
!! ATAAGTTGATTTCGGGGGTT+TGG - chr2.1:23567434-23567453 MS.gene63734:intron 40.0%
!! CTGGTGGGTTAATACTGTTT+GGG - chr2.1:23566935-23566954 MS.gene63734:intron 40.0%
!! GAGACATAAGTTGATTTCGG+GGG - chr2.1:23567429-23567448 MS.gene63734:intron 40.0%
!! TTGGAGTATTGGACTAAGTC+TGG + chr2.1:23567901-23567920 None:intergenic 40.0%
!!! TGTTTTGATGACTTACAGCC+AGG - chr2.1:23567475-23567494 MS.gene63734:intron 40.0%
AAGTTACCAGCAGGAACTTG+AGG + chr2.1:23570171-23570190 None:intergenic 45.0%
ACTAAGTCTGGTCAACTGAC+TGG + chr2.1:23567889-23567908 None:intergenic 45.0%
AGCAACTATGGTCAGTACTC+AGG + chr2.1:23570021-23570040 None:intergenic 45.0%
AGTTACCAGCAGGAACTTGA+GGG + chr2.1:23570170-23570189 None:intergenic 45.0%
ATGAGCAGAACAGGAAAGAG+GGG + chr2.1:23569068-23569087 None:intergenic 45.0%
ATGATGTAAGGGCGAGATAG+AGG + chr2.1:23567561-23567580 None:intergenic 45.0%
CCTCCAGTTTGGTAAAGTAG+GGG - chr2.1:23570518-23570537 MS.gene63734:CDS 45.0%
CGATCAACAATGTACCCCAT+AGG + chr2.1:23567679-23567698 None:intergenic 45.0%
CTCCTCCAGTTTGGTAAAGT+AGG - chr2.1:23570516-23570535 MS.gene63734:CDS 45.0%
CTTTCACCCATTGATGAGAC+AGG + chr2.1:23570273-23570292 None:intergenic 45.0%
GATGAGCAGAACAGGAAAGA+GGG + chr2.1:23569069-23569088 None:intergenic 45.0%
GATGCTGACGACTTATCACA+AGG - chr2.1:23569174-23569193 MS.gene63734:intron 45.0%
GCAGCTAGAAGATATAGGTG+TGG - chr2.1:23569123-23569142 MS.gene63734:intron 45.0%
GCATTTAAGCATGGTGTCCA+TGG - chr2.1:23568353-23568372 MS.gene63734:intron 45.0%
GCTGAATTGTCTTCACAGCT+CGG - chr2.1:23570038-23570057 MS.gene63734:intron 45.0%
GGAGATTTCATGAGTGGCTA+AGG - chr2.1:23568254-23568273 MS.gene63734:intron 45.0%
GGCGAGATAGAGGTAAAATG+TGG + chr2.1:23567551-23567570 None:intergenic 45.0%
GTGTTGTGAAATATCGGCCA+TGG - chr2.1:23567998-23568017 MS.gene63734:intron 45.0%
TCGCCAGCATTCACAGATAA+AGG - chr2.1:23569087-23569106 MS.gene63734:intron 45.0%
TGAAGAACAAAGCTCCAAGG+TGG - chr2.1:23570364-23570383 MS.gene63734:CDS 45.0%
TGCTGGTGCTTGAACTTTCA+TGG - chr2.1:23570402-23570421 MS.gene63734:CDS 45.0%
TTGAGGGCTTATCTGTTTGC+TGG + chr2.1:23570154-23570173 None:intergenic 45.0%
TTGGTTACATTCACGATCGC+AGG - chr2.1:23567156-23567175 MS.gene63734:intron 45.0%
TTGTGAAATATCGGCCATGG+TGG - chr2.1:23568001-23568020 MS.gene63734:intron 45.0%
TTTCTCTGTTGTGATCGCCT+TGG - chr2.1:23569424-23569443 MS.gene63734:intron 45.0%
! AAAACCTTCGCTTGTTGCAG+GGG - chr2.1:23569581-23569600 MS.gene63734:intron 45.0%
! ACGATGGTTTGGCACCATTA+TGG + chr2.1:23570107-23570126 None:intergenic 45.0%
! ACTGACTGGTTAGAACCATG+TGG + chr2.1:23567875-23567894 None:intergenic 45.0%
! ATTGGTGGCCTGTAAATGTC+TGG - chr2.1:23567394-23567413 MS.gene63734:intron 45.0%
! CGATGGTTTGGCACCATTAT+GGG + chr2.1:23570106-23570125 None:intergenic 45.0%
! GAAAACCTTCGCTTGTTGCA+GGG - chr2.1:23569580-23569599 MS.gene63734:intron 45.0%
! GATGGTTTGGCACCATTATG+GGG + chr2.1:23570105-23570124 None:intergenic 45.0%
! GCCATTTGCCTAACTAGCTT+TGG - chr2.1:23570594-23570613 MS.gene63734:CDS 45.0%
! TGAAAACCTTCGCTTGTTGC+AGG - chr2.1:23569579-23569598 MS.gene63734:intron 45.0%
!! GTAGCTTTGGGTGTAAATGG+AGG + chr2.1:23569777-23569796 None:intergenic 45.0%
!! TGATTGGTCTACGATGCTAC+CGG - chr2.1:23566357-23566376 MS.gene63734:CDS 45.0%
!! AAATTTCATTAATATATAAA+GGG - chr2.1:23568232-23568251 MS.gene63734:intron 5.0%
!! TAATTAGTTAAAATAATTTA+TGG - chr2.1:23566608-23566627 MS.gene63734:CDS 5.0%
AAAGAGGGGCAGGGGAATAA+AGG + chr2.1:23569054-23569073 None:intergenic 50.0%
AATCGGCGGATGGAACTGAT+TGG - chr2.1:23566341-23566360 MS.gene63734:CDS 50.0%
ACTGACTGCAAGCCTGTATC+AGG + chr2.1:23568648-23568667 None:intergenic 50.0%
AGTGAGCACATCATCCTCCT+TGG + chr2.1:23570243-23570262 None:intergenic 50.0%
AGTTCCTGCTGGTAACTTCG+AGG - chr2.1:23570173-23570192 MS.gene63734:intron 50.0%
ATAAGCCCTCAAGTTCCTGC+TGG - chr2.1:23570162-23570181 MS.gene63734:intron 50.0%
CCCCTACTTTACCAAACTGG+AGG + chr2.1:23570521-23570540 None:intergenic 50.0%
CGATGAGCAGAACAGGAAAG+AGG + chr2.1:23569070-23569089 None:intergenic 50.0%
CGTCCCCTACTTTACCAAAC+TGG + chr2.1:23570524-23570543 None:intergenic 50.0%
CTGCCTATAGTCCATGGTGA+AGG + chr2.1:23570550-23570569 None:intergenic 50.0%
CTTCACAGCTCGGACTTTCT+TGG - chr2.1:23570048-23570067 MS.gene63734:intron 50.0%
CTTGTGCCTGCGTGTGTAAA+CGG - chr2.1:23566452-23566471 MS.gene63734:CDS 50.0%
CTTTCAGCTGGTTGCTACTG+TGG - chr2.1:23570452-23570471 MS.gene63734:CDS 50.0%
CTTTCATGGTCGTGTGACAG+TGG - chr2.1:23570416-23570435 MS.gene63734:CDS 50.0%
GAAACGGTTCTCCTCCAGTT+TGG - chr2.1:23570507-23570526 MS.gene63734:CDS 50.0%
GGCATGAGCATTTGCAATGC+TGG - chr2.1:23570385-23570404 MS.gene63734:CDS 50.0%
TACTGTGGACCAAAGCCAAC+CGG - chr2.1:23570467-23570486 MS.gene63734:CDS 50.0%
TCTGTTGTGATCGCCTTGGT+AGG - chr2.1:23569428-23569447 MS.gene63734:intron 50.0%
TCTTCATCTCCTTTCCCTCC+CGG + chr2.1:23570489-23570508 None:intergenic 50.0%
TGAGCCACCATAAAACGGCA+TGG + chr2.1:23568029-23568048 None:intergenic 50.0%
TGCAAATGCTCATGCCACCT+TGG + chr2.1:23570381-23570400 None:intergenic 50.0%
TTAGGCAAATGGCAAACGCC+TGG + chr2.1:23570587-23570606 None:intergenic 50.0%
! CAATGATGGGGAAGATCACG+TGG + chr2.1:23567502-23567521 None:intergenic 50.0%
! CACAAGCGACGACGTTTTGA+CGG + chr2.1:23566438-23566457 None:intergenic 50.0%
! GTGATTGTGCCGTTACGTTG+AGG + chr2.1:23566511-23566530 None:intergenic 50.0%
! TCTGTTTGCTGGCAAAACGC+CGG + chr2.1:23570143-23570162 None:intergenic 50.0%
AATGGCAAACGCCTGGAAGG+CGG + chr2.1:23570580-23570599 None:intergenic 55.0%
ACTGTGGACCAAAGCCAACC+GGG - chr2.1:23570468-23570487 MS.gene63734:CDS 55.0%
AGAACAGGAAAGAGGGGCAG+GGG + chr2.1:23569062-23569081 None:intergenic 55.0%
AGGGGACGATACCTTCACCA+TGG - chr2.1:23570536-23570555 MS.gene63734:CDS 55.0%
ATGCTGGCGATGAGCAGAAC+AGG + chr2.1:23569077-23569096 None:intergenic 55.0%
CAAGGGCTGCCTATAGTCCA+TGG + chr2.1:23570556-23570575 None:intergenic 55.0%
CAGAACAGGAAAGAGGGGCA+GGG + chr2.1:23569063-23569082 None:intergenic 55.0%
CTGCTGGTAACTTCGAGGCA+GGG - chr2.1:23570178-23570197 MS.gene63734:intron 55.0%
GCAAATGGCAAACGCCTGGA+AGG + chr2.1:23570583-23570602 None:intergenic 55.0%
GGTTTGGCACCATTATGGGG+TGG + chr2.1:23570102-23570121 None:intergenic 55.0%
TAAACGAGTCGACGTTGCCG+AGG - chr2.1:23566399-23566418 MS.gene63734:CDS 55.0%
TCTCCACCGTTTACACACGC+AGG + chr2.1:23566461-23566480 None:intergenic 55.0%
TGCTGGTAACTTCGAGGCAG+GGG - chr2.1:23570179-23570198 MS.gene63734:intron 55.0%
! AGCTCTGGCACACGATGGTT+TGG + chr2.1:23570118-23570137 None:intergenic 55.0%
! GCAGGGGTGCAAACGGATTT+CGG - chr2.1:23569597-23569616 MS.gene63734:intron 55.0%
! GCTTGTTGCAGGGGTGCAAA+CGG - chr2.1:23569590-23569609 MS.gene63734:intron 55.0%
!! AAAACGGCATGGTGCCACCA+TGG + chr2.1:23568018-23568037 None:intergenic 55.0%
!!! GGCACCATGCCGTTTTATGG+TGG - chr2.1:23568022-23568041 MS.gene63734:intron 55.0%
!!! GGTGGCACCATGCCGTTTTA+TGG - chr2.1:23568019-23568038 MS.gene63734:intron 55.0%
AAACGCCTGGAAGGCGGACA+AGG + chr2.1:23570574-23570593 None:intergenic 60.0%
AACGCCTGGAAGGCGGACAA+GGG + chr2.1:23570573-23570592 None:intergenic 60.0%
ACGGTGTGGCCACTGTTCCT+CGG + chr2.1:23566419-23566438 None:intergenic 60.0%
CAAAGCCAACCGGGAGGGAA+AGG - chr2.1:23570477-23570496 MS.gene63734:CDS 60.0%
CATCGTGTGCCAGAGCTAGC+CGG - chr2.1:23570121-23570140 MS.gene63734:intron 60.0%
CATCTCCTTTCCCTCCCGGT+TGG + chr2.1:23570485-23570504 None:intergenic 60.0%
CCTGCCTCGAAGTTACCAGC+AGG + chr2.1:23570180-23570199 None:intergenic 60.0%
CCTGCTGGTAACTTCGAGGC+AGG - chr2.1:23570177-23570196 MS.gene63734:intron 60.0%
GACAGCCAGCCACCCCATAA+TGG - chr2.1:23570090-23570109 MS.gene63734:intron 60.0%
GCAGAACAGGAAAGAGGGGC+AGG + chr2.1:23569064-23569083 None:intergenic 60.0%
GTGCCTGCGTGTGTAAACGG+TGG - chr2.1:23566455-23566474 MS.gene63734:CDS 60.0%
TCGACGTTGCCGAGGAACAG+TGG - chr2.1:23566407-23566426 MS.gene63734:CDS 60.0%
TCTACACCGTCGCCGATGAC+CGG - chr2.1:23566299-23566318 MS.gene63734:CDS 60.0%
TGCACCCCTGCAACAAGCGA+AGG + chr2.1:23569588-23569607 None:intergenic 60.0%
TGCAGTGCAGTGCCGTGCTT+TGG + chr2.1:23569690-23569709 None:intergenic 60.0%
TGGACCAAAGCCAACCGGGA+GGG - chr2.1:23570472-23570491 MS.gene63734:CDS 60.0%
TGGCACCATTATGGGGTGGC+TGG + chr2.1:23570098-23570117 None:intergenic 60.0%
TGGGGAAGATCACGTGGTCC+TGG + chr2.1:23567496-23567515 None:intergenic 60.0%
!! CTTTCCCTCCCGGTTGGCTT+TGG + chr2.1:23570479-23570498 None:intergenic 60.0%
!! GCGACGACGTTTTGACGGTG+TGG + chr2.1:23566433-23566452 None:intergenic 60.0%
GTGGACCAAAGCCAACCGGG+AGG - chr2.1:23570471-23570490 MS.gene63734:CDS 65.0%
! GGCAAAACGCCGGCTAGCTC+TGG + chr2.1:23570133-23570152 None:intergenic 65.0%
!! CGGCTAGCTCTGGCACACGA+TGG + chr2.1:23570123-23570142 None:intergenic 65.0%
ACCGTCGCCGATGACCGGAG+AGG - chr2.1:23566304-23566323 MS.gene63734:CDS 70.0%
GCAGCCCTTGTCCGCCTTCC+AGG - chr2.1:23570566-23570585 MS.gene63734:CDS 70.0%
GCCTCTCCGGTCATCGGCGA+CGG + chr2.1:23566308-23566327 None:intergenic 70.0%
GTCGCCGATGACCGGAGAGG+CGG - chr2.1:23566307-23566326 MS.gene63734:CDS 70.0%
!! AGGCGGCGGCGCTGGTGAAT+CGG - chr2.1:23566324-23566343 MS.gene63734:CDS 70.0%
!! GGCGCTGGTGAATCGGCGGA+TGG - chr2.1:23566331-23566350 MS.gene63734:CDS 70.0%
GCCGATGACCGGAGAGGCGG+CGG - chr2.1:23566310-23566329 MS.gene63734:CDS 75.0%
GCCGCCGCCTCTCCGGTCAT+CGG + chr2.1:23566314-23566333 None:intergenic 75.0%
!! CGGCGGCGCTGGTGAATCGG+CGG - chr2.1:23566327-23566346 MS.gene63734:CDS 75.0%
! CACCAGCGCCGCCGCCTCTC+CGG + chr2.1:23566321-23566340 None:intergenic 80.0%
! GACCGGAGAGGCGGCGGCGC+TGG - chr2.1:23566316-23566335 MS.gene63734:CDS 85.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 23566235 23570638 23566235 ID=MS.gene63734
chr2.1 mRNA 23566235 23570638 23566235 ID=MS.gene63734.t1;Parent=MS.gene63734
chr2.1 exon 23570321 23570638 23570321 ID=MS.gene63734.t1.exon1;Parent=MS.gene63734.t1
chr2.1 CDS 23570321 23570638 23570321 ID=cds.MS.gene63734.t1;Parent=MS.gene63734.t1
chr2.1 exon 23569293 23569380 23569293 ID=MS.gene63734.t1.exon2;Parent=MS.gene63734.t1
chr2.1 CDS 23569293 23569380 23569293 ID=cds.MS.gene63734.t1;Parent=MS.gene63734.t1
chr2.1 exon 23567650 23567779 23567650 ID=MS.gene63734.t1.exon3;Parent=MS.gene63734.t1
chr2.1 CDS 23567650 23567779 23567650 ID=cds.MS.gene63734.t1;Parent=MS.gene63734.t1
chr2.1 exon 23566235 23566817 23566235 ID=MS.gene63734.t1.exon4;Parent=MS.gene63734.t1
chr2.1 CDS 23566235 23566817 23566235 ID=cds.MS.gene63734.t1;Parent=MS.gene63734.t1
Gene Sequence

>MS.gene63734

ATGTCGTTGATGAAGGTATTTCGATCTCGCAAATTCTCAAAATCCTTCAAGGAAGTTCAATCTATCTACACCGTCGCCGATGACCGGAGAGGCGGCGGCGCTGGTGAATCGGCGGATGGAACTGATTGGTCTACGATGCTACCGGATCTCCTTGCAGAGATAATTAAACGAGTCGACGTTGCCGAGGAACAGTGGCCACACCGTCAAAACGTCGTCGCTTGTGCCTGCGTGTGTAAACGGTGGAGAGATATTACACGTGAGATCGTTAAGTCACCTCAACGTAACGGCACAATCACTTTTCCTTCTTGTCTTAAACAGGTCCTGCAACAAAAATTTCATTTTTTTTTTGGTTTAATTTATTGGTATATGCTTTTAATTAGTTAAAATAATTTATGGATTGTGAAAAACAATGATTTTTGTTTTTTGGTTTTGTTTAGATTAGACCCTTTTGAAAGTAGGTTTTCACTTGGCACTAATAATCTCTTGAATTTGTTAATTGTTTTAAGAATTGATTATGAGATTAATTATGGTTTTGCTTGTTGAAGATGCAATGGAATGGTTCATTCAGTGTTAGTAGTAAAAGGGTTTATTGGTGAGTGGTTAATTAGGTTTTTGTTGTGAGGATTGTTGGTTAATTAGTGAGTGATTTGGGATATTTGCATGAGCAATGGAAGCTATTTGGTAGTGTCTTAATTTCAGACTGGTGGGTTAATACTGTTTGGGAAATTGCAGTTGCAGTTTAATAGAATTTGGTGTTTTAGTTTAAATCCAGTAATAAGGTGTTTGTTAAATGGGTATTAGTATTGGTTATTGTAGTTTTATGCGTTTGAAATGGAAAAGATGGAAGAATAGTGTTCAGGAATCAAGGAACGTAAGTCATTTTATCTTAAAAAAGTGATTTTGAGATAAAATGATTTATGTTTGGTTACATTCACGATCGCAGGAGTTGAACAGTAAATTTGAGTGTAAAAATCACATTAGGAGGCATTAACTATAATTTTGTTTCTTCAAGTTAGAATCAATTCTGGAGGCAAAATCATTTCTAATCTAAAACCCGCTAATAATACCAAAATCAATTCTGGAGGAATACTTTTTTTTTATGGTGAATGCTTTCTTTGCTTGAAGAATTTTATCATAGTGTTGATTAACATTTTCTTCAATTGGTGGCCTGTAAATGTCTGGTTTGTATTGAATGAGACATAAGTTGATTTCGGGGGTTTGGAGTTTGACAATCTTGTTATGTTTTGATGACTTACAGCCAGGACCACGTGATCTTCCCCATCATTGTCTTATAAAGCGGAGTAAGAAGACTTCCACATTTTACCTCTATCTCGCCCTTACATCATGTAAGTACTGTTTTGGTAAAATGTTTTTTTTTGCCTTTTTTTATGGATGGTTGAAAATTAACTATGAACCGAGTTGTATGATATCCTTTTATCTTCCTATGGGGTACATTGTTGATCGTATAAAGTCTAATGGTATATGTATATAGACTAGATCTGCAAAACATCTCATTGGTCAAATGTATGGCAAACATTACTTGTGGGGCATCAAAACAAAGAAGAGCTTTGTTGTTGGTCAACGTGTGAAATGACTTCTGTTCATTTTATAAATGAAAACTAAATATATTTGTCAAACCACATGGTTCTAACCAGTCAGTTGACCAGACTTAGTCCAATACTCCAAGATGACTTGCTTCAGTCAATGTATGGAAGACCTACCTTGTTCAATTTACTCATCCTATTCCTAACTAGTTTGGTTTAGTGTTGTGAAATATCGGCCATGGTGGCACCATGCCGTTTTATGGTGGCTCAAAATGATGGATATTTTAGCTTTCCGTTACGGTTCGTCGATTGATAACACTAGTTTGGTTTCCCACAATAAGAAAAGATAAGCTTGAAGTCTTTCAATAATAAGCTATGCACATGAACAATAATCAGAAATGTTTTCAGAGATTGAAGTGGAAGGATCTATACTTGTTGAAGTGTATAAATAAGAAATTTCATTAATATATAAAGGGGAGATTTCATGAGTGGCTAAGGCAGCTTCAAAGCAGAAGTTGTTTAAAGAAGCCTAAATGCATACTATGATTTGTTGGCAGTTAGATAGATTATTTTTGCATTTAAGCATGGTGTCCATGGTTACTTAATTCTATCATCTTTTGGTCTTACCGCATCTCATATTTCTTAGTAGTCGTAAAGAGTGTGTTTCTGCTGAGAAAGAACATTCTTATTATGTAAATCTGGAGGATATACTAATTTAGTAATTGTAGGTCTTGACGTTAATTCTACTTCACTTGTTTTGATTAACTAATTTAGTAATTGTAGGTCTTGACGTTAATTCTACTTCACTTGTTTTGATTAATACGCGAGATAGCTTATGTAGACCTAGGTCTAGAAAAATTGCTGATCCTGATACAGGCTTGCAGTCAGTTAGTTTTATGCTTTTCATTTTTCCTTTTTCTTTTCCTGTAGTAGTGAATATTCCTTTGTAGTAGTTATGTGGTTGTCACATGGAAAATGAAATAAAGCTGTAGAATTCCAATTCTTGAGCAATTAATGGAAGCAATATTATTTACTGTAAACATATGTTTGGTGGATGTGAACTTTTGATAGATCCATGATTGAAAGAGAGTTGTTTGTAACTGTGTGATTTGTGGAGTAGTTTGTAACTACGATAATGATTAAAATTTCAAATGATGATAGTTAGTACAAAAGGCTTATTTTTCTTAACATTCCGACAATTATAAATTGCTGATTATTGAACAAATTATTTTCTATTTTACATTTTCTTTGATGTTTTGGGAGTTAATGCTTCCTTTATTCCCCTGCCCCTCTTTCCTGTTCTGCTCATCGCCAGCATTCACAGATAAAGGAAAGTTTCTATTAGCAGCTAGAAGATATAGGTGTGGTACCCATACTGAGTATGTTATATCGCTTGATGCTGACGACTTATCACAAGGAAGTAATGCTTATGTTGGCAAGCTAAGGTAAAGCTCTCTTACTACAAAAAGTTATTTGCTTCCAGGAAAGAAATAAAATGTTTCTTACGTGTTTCTTCTGCTTGGTTTTTTATCCTTTTTGTTGAATGGCATGGTGTTAATGTAAGATACTGTCATTGGCAACATTTATAATGTTTTCAAAATGCTTTAGATTAGTGCTACATTTGCTGTTAAAATAGACATTCTACTTTCTCTGTTGTGATCGCCTTGGTAGGAAACAGAGAATTAGAACTTTGTGTTGGCACAATCAGGGAACTGATTAGTTACAGTTTGAGTTTTATTCAAATCCTCAACCATAAGAAAAATAAAAAGGAACTTACTCTTTTAAAGGAAATTAATTTTATGAAAACCTTCGCTTGTTGCAGGGGTGCAAACGGATTTCGGCATTGTTTTTAATATCAAAACTGCTCCTAAAAATATCTAAGATCAAAGTTTCATTGATTTTAAAAATCCAAAGCACGGCACTGCACTGCACACGATCTTAGTTTGCAGTTTCTATGTTTGTTTTCCTTATATTAAACTATAGTGAATTATTCATCCTCCATTTACACCCAAAGCTACATAATATTGGTGAAATTCTACTAATTTAAACCCTCTTAGCCTTATTTATACAAAAACTCTTGATGTGTATGTTGGTCAACAAAGTTGCTGGTTGTATTGAAACCCATGCTGAAATCTGTATTCATAGCTCATTAGCTTGGAGATTGTCTGCTGATTTGCTCATTTTTATTTTTTTAAATGAAAAACCATTAATTGAATTTATGGTCAATCTTTTAATTTGTCCTGAGTACTGACCATAGTTGCTGAATTGTCTTCACAGCTCGGACTTTCTTGGCACCAACTTCACAATTTACGACAGCCAGCCACCCCATAATGGTGCCAAACCATCGTGTGCCAGAGCTAGCCGGCGTTTTGCCAGCAAACAGATAAGCCCTCAAGTTCCTGCTGGTAACTTCGAGGCAGGGGATGTTTCCTACAAGTTCAACCTTTTGAAGTCGAGAGGGCCAAGGAGGATGATGTGCTCACTAAAGTTTCCTGTCTCATCAATGGGTGAAAGTTCAGATAGCAAGTCTTTTGATGGTCAAAAGATGCACAGTAAAGAACATGCTGCTTCTGCGCACACAATCTTGAAGAACAAAGCTCCAAGGTGGCATGAGCATTTGCAATGCTGGTGCTTGAACTTTCATGGTCGTGTGACAGTGGCATCAGTGAAGAACTTTCAGCTGGTTGCTACTGTGGACCAAAGCCAACCGGGAGGGAAAGGAGATGAAGAAACGGTTCTCCTCCAGTTTGGTAAAGTAGGGGACGATACCTTCACCATGGACTATAGGCAGCCCTTGTCCGCCTTCCAGGCGTTTGCCATTTGCCTAACTAGCTTTGGTACTAAACTGGCTTGTGAGTAA
Protein sequence

>MS.gene63734.t1

MSLMKVFRSRKFSKSFKEVQSIYTVADDRRGGGAGESADGTDWSTMLPDLLAEIIKRVDVAEEQWPHRQNVVACACVCKRWRDITREIVKSPQRNGTITFPSCLKQPGPRDLPHHCLIKRSKKTSTFYLYLALTSSFTDKGKFLLAARRYRCGTHTEYVISLDADDLSQGSNAYVGKLSSDFLGTNFTIYDSQPPHNGAKPSCARASRRFASKQISPQVPAGNFEAGDVSYKFNLLKSRGPRRMMCSLKFPVSSMGESSDSKSFDGQKMHSKEHAASAHTILKNKAPRWHEHLQCWCLNFHGRVTVASVKNFQLVATVDQSQPGGKGDEETVLLQFGKVGDDTFTMDYRQPLSAFQAFAICLTSFGTKLACE