Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64734.t1 | RHN54287.1 | 89.5 | 600 | 39 | 1 | 1 | 576 | 1 | 600 | 1.80E-287 | 998 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64734.t1 | Q9SD34 | 52.0 | 548 | 208 | 11 | 64 | 568 | 71 | 606 | 2.9e-129 | 463.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64734.t1 | A0A396HU99 | 89.5 | 600 | 39 | 1 | 1 | 576 | 1 | 600 | 1.3e-287 | 998.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene64734.t1 | TR | SWI/SNF-BAF60b |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050084 | MS.gene64734 | 0.84704 | 1.49E-59 | -1.69E-46 |
| MS.gene050085 | MS.gene64734 | 0.839451 | 1.57E-57 | -1.69E-46 |
| MS.gene050116 | MS.gene64734 | 0.803115 | 4.07E-49 | -1.69E-46 |
| MS.gene057131 | MS.gene64734 | 0.803656 | 3.14E-49 | -1.69E-46 |
| MS.gene058292 | MS.gene64734 | 0.809284 | 2.04E-50 | -1.69E-46 |
| MS.gene059007 | MS.gene64734 | 0.862327 | 5.48E-64 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64734.t1 | MTR_5g021500 | 92.977 | 598 | 18 | 1 | 1 | 574 | 1 | 598 | 0.0 | 1145 |
| MS.gene64734.t1 | MTR_3g117490 | 53.484 | 531 | 204 | 8 | 72 | 566 | 207 | 730 | 7.20e-169 | 516 |
| MS.gene64734.t1 | MTR_5g021450 | 64.807 | 233 | 72 | 6 | 60 | 287 | 33 | 260 | 1.51e-94 | 304 |
| MS.gene64734.t1 | MTR_5g021450 | 64.807 | 233 | 72 | 6 | 60 | 287 | 33 | 260 | 2.32e-94 | 304 |
| MS.gene64734.t1 | MTR_3g064250 | 29.637 | 523 | 319 | 9 | 93 | 577 | 9 | 520 | 7.15e-64 | 224 |
| MS.gene64734.t1 | MTR_3g064260 | 28.988 | 514 | 315 | 8 | 97 | 574 | 15 | 514 | 1.34e-60 | 215 |
| MS.gene64734.t1 | MTR_3g064270 | 28.210 | 514 | 325 | 7 | 97 | 577 | 15 | 517 | 7.22e-60 | 213 |
| MS.gene64734.t1 | MTR_3g064280 | 30.095 | 525 | 314 | 16 | 97 | 585 | 15 | 522 | 3.37e-55 | 200 |
| MS.gene64734.t1 | MTR_3g064300 | 40.000 | 120 | 72 | 0 | 97 | 216 | 15 | 134 | 9.34e-26 | 107 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64734.t1 | AT3G51120 | 54.039 | 557 | 195 | 10 | 64 | 574 | 71 | 612 | 0.0 | 550 |
| MS.gene64734.t1 | AT2G16485 | 50.664 | 527 | 216 | 10 | 96 | 586 | 598 | 1116 | 2.03e-157 | 493 |
| MS.gene64734.t1 | AT2G16485 | 50.877 | 513 | 210 | 9 | 96 | 574 | 598 | 1102 | 2.12e-154 | 485 |
| MS.gene64734.t1 | AT2G18090 | 52.778 | 324 | 143 | 3 | 86 | 399 | 68 | 391 | 6.18e-120 | 374 |
| MS.gene64734.t1 | AT2G18090 | 52.778 | 324 | 143 | 3 | 86 | 399 | 68 | 391 | 1.38e-119 | 374 |
| MS.gene64734.t1 | AT5G63700 | 28.388 | 546 | 300 | 15 | 100 | 574 | 25 | 550 | 1.15e-59 | 209 |
| MS.gene64734.t1 | AT5G63700 | 27.930 | 512 | 284 | 13 | 100 | 543 | 25 | 519 | 9.01e-58 | 202 |
| MS.gene64734.t1 | AT5G08430 | 32.986 | 288 | 159 | 7 | 303 | 574 | 32 | 301 | 6.31e-33 | 131 |
| MS.gene64734.t1 | AT5G08430 | 32.986 | 288 | 159 | 7 | 303 | 574 | 32 | 301 | 2.43e-32 | 131 |
| MS.gene64734.t1 | AT5G23480 | 27.645 | 293 | 180 | 7 | 298 | 574 | 22 | 298 | 2.21e-23 | 103 |
| MS.gene64734.t1 | AT5G23480 | 27.645 | 293 | 180 | 7 | 298 | 574 | 22 | 298 | 2.21e-23 | 103 |
| MS.gene64734.t1 | AT5G23480 | 27.645 | 293 | 180 | 7 | 298 | 574 | 22 | 298 | 2.21e-23 | 103 |
| MS.gene64734.t1 | AT5G23480 | 27.645 | 293 | 180 | 7 | 298 | 574 | 22 | 298 | 2.21e-23 | 103 |
| MS.gene64734.t1 | AT5G23480 | 27.645 | 293 | 180 | 7 | 298 | 574 | 22 | 298 | 2.21e-23 | 103 |
| MS.gene64734.t1 | AT5G23480 | 27.599 | 279 | 166 | 8 | 298 | 560 | 22 | 280 | 9.44e-21 | 95.5 |
Find 111 sgRNAs with CRISPR-Local
Find 220 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCCCTGCAGAAAATAATTT+TGG | 0.173795 | 5.2:-12666541 | MS.gene64734:CDS |
| GTTGCAGTTGCCGATGTTTC+CGG | 0.211639 | 5.2:+12669023 | None:intergenic |
| CATACTCCAGCAAGAGATTC+TGG | 0.236810 | 5.2:+12666707 | None:intergenic |
| TACCATCTTAAAGATGAAAA+AGG | 0.271358 | 5.2:-12666919 | MS.gene64734:CDS |
| ACCCACAGTTTAGCATATTT+AGG | 0.300163 | 5.2:+12665269 | None:intergenic |
| TACATGTATAGCACATATAA+TGG | 0.316002 | 5.2:+12667399 | None:intergenic |
| TTGCGTCAAAGTATAAAGTA+TGG | 0.336240 | 5.2:-12665862 | MS.gene64734:CDS |
| TCTAGACTAGTAAATTTGTT+TGG | 0.338628 | 5.2:-12666631 | MS.gene64734:CDS |
| CTTCATAACCTCACTGTTCT+CGG | 0.347536 | 5.2:+12668845 | None:intergenic |
| TAAGAGATGCACAAGTAAAA+AGG | 0.350827 | 5.2:-12666440 | MS.gene64734:CDS |
| GAACAGTGCCCAGGGAAATA+AGG | 0.351756 | 5.2:-12667273 | MS.gene64734:CDS |
| GACAGTTCCGGCGACAGTTC+CGG | 0.368439 | 5.2:-12668997 | MS.gene64734:CDS |
| CAAAGTACCGCAATTCCATT+TGG | 0.377811 | 5.2:+12668424 | None:intergenic |
| GTTTCTGTTAGAGAAAATAA+AGG | 0.383747 | 5.2:-12667335 | MS.gene64734:CDS |
| ATTGCGGCTTAATAATCTTC+GGG | 0.390772 | 5.2:-12665347 | MS.gene64734:CDS |
| TCTTCCTTCTTGATCTGCTT+CGG | 0.391127 | 5.2:+12668774 | None:intergenic |
| TATAGACTTGTCCAAGTTGT+AGG | 0.396375 | 5.2:-12666229 | MS.gene64734:intron |
| ATATTTAGGAAAGAAGTAAA+TGG | 0.401021 | 5.2:+12665283 | None:intergenic |
| GACAGTTCCGGTGGCCGTTA+CGG | 0.402343 | 5.2:-12668985 | MS.gene64734:CDS |
| GATAGACGAGATTTCGAATC+AGG | 0.407835 | 5.2:-12666020 | MS.gene64734:CDS |
| CTTTAAGATGGTAAAGTTTG+TGG | 0.413487 | 5.2:+12666929 | None:intergenic |
| AATTGCGGCTTAATAATCTT+CGG | 0.416863 | 5.2:-12665348 | MS.gene64734:CDS |
| TGATGTCCAGAATCTCTTGC+TGG | 0.429046 | 5.2:-12666713 | MS.gene64734:CDS |
| TTCGGCGGAGGAGCTACTTT+CGG | 0.429190 | 5.2:+12668792 | None:intergenic |
| TTATAAGAAAGTGGGGTTCA+AGG | 0.443433 | 5.2:+12666572 | None:intergenic |
| GAAGAAGAAGCGCGGTCGTC+CGG | 0.446023 | 5.2:-12668826 | MS.gene64734:CDS |
| GACGAAGCAAGTTGAAGTTC+CGG | 0.458436 | 5.2:-12668949 | MS.gene64734:CDS |
| TTTAAGATGGTAAAGTTTGT+GGG | 0.462817 | 5.2:+12666930 | None:intergenic |
| ACATGTATAGCACATATAAT+GGG | 0.465510 | 5.2:+12667400 | None:intergenic |
| ATTGAGCGCTGCTGCTCCTA+TGG | 0.466028 | 5.2:-12666962 | MS.gene64734:CDS |
| CTACTTGCGGCGAAGTCTGA+TGG | 0.467567 | 5.2:-12666347 | MS.gene64734:CDS |
| GTTTGCTTCATTTGCTTCGA+CGG | 0.470458 | 5.2:-12668744 | MS.gene64734:CDS |
| ATACCATTTCCTTATTTCCC+TGG | 0.470501 | 5.2:+12667264 | None:intergenic |
| TAGGAGCAGCAGCGCTCAAT+GGG | 0.471296 | 5.2:+12666965 | None:intergenic |
| AGGATTCACGAGAAGGTTGT+TGG | 0.472648 | 5.2:-12666301 | MS.gene64734:CDS |
| TTGTGGGAAGTTTGAACCAT+AGG | 0.473304 | 5.2:+12666946 | None:intergenic |
| CAATTAGAGATTTCTGTTGA+GGG | 0.477581 | 5.2:+12666662 | None:intergenic |
| TACCATTTCCTTATTTCCCT+GGG | 0.478038 | 5.2:+12667265 | None:intergenic |
| AAGAAGCCTAAGGGACCTTC+AGG | 0.481000 | 5.2:-12666844 | MS.gene64734:CDS |
| ATTAGTGATGCTGTTGCAAA+TGG | 0.481762 | 5.2:-12666511 | MS.gene64734:CDS |
| ATAGGAGCAGCAGCGCTCAA+TGG | 0.488771 | 5.2:+12666964 | None:intergenic |
| GTCTCGTTCTCTGCGATCGC+CGG | 0.493648 | 5.2:-12668716 | MS.gene64734:intron |
| TTCTTGATCTGCTTCGGCGG+AGG | 0.494190 | 5.2:+12668780 | None:intergenic |
| ACAATTAGAGATTTCTGTTG+AGG | 0.494879 | 5.2:+12666661 | None:intergenic |
| ATTTCGATGACAAGAGCAGC+TGG | 0.503366 | 5.2:-12667068 | MS.gene64734:CDS |
| CACGCCGGATGATACGCTTT+AGG | 0.504465 | 5.2:+12668482 | None:intergenic |
| ATTTATGGAACAATCAAAGC+CGG | 0.504469 | 5.2:-12669042 | None:intergenic |
| TGCCCAGGGAAATAAGGAAA+TGG | 0.504537 | 5.2:-12667267 | MS.gene64734:intron |
| TCTTCCGTTCAAAAGCCAAA+TGG | 0.509901 | 5.2:-12668439 | MS.gene64734:CDS |
| CTCCGCCGCGGTCTCCGTAA+CGG | 0.511292 | 5.2:+12668971 | None:intergenic |
| GAGAGACGGCGGTTGTTGTA+CGG | 0.511402 | 5.2:-12668895 | MS.gene64734:CDS |
| AACTGCAACGGAGACAGTTC+CGG | 0.512031 | 5.2:-12669009 | MS.gene64734:CDS |
| AGGAAAGAAGTAAATGGTAA+AGG | 0.514336 | 5.2:+12665289 | None:intergenic |
| TTGTTTGGAAAAGCTCGTCT+TGG | 0.514641 | 5.2:-12666616 | MS.gene64734:CDS |
| GCTGATTGAGAACAGTGCCC+AGG | 0.522778 | 5.2:-12667282 | MS.gene64734:CDS |
| TCCTTCTTGATCTGCTTCGG+CGG | 0.529690 | 5.2:+12668777 | None:intergenic |
| GCGGTCTCCGTAACGGCCAC+CGG | 0.530407 | 5.2:+12668978 | None:intergenic |
| ATGACAGCGAGAACTACTTT+CGG | 0.532438 | 5.2:+12668870 | None:intergenic |
| GCAAGTTGAAGTTCCGGCGA+AGG | 0.539523 | 5.2:-12668943 | MS.gene64734:CDS |
| TGCTTCATTTGCTTCGACGG+TGG | 0.548926 | 5.2:-12668741 | MS.gene64734:CDS |
| GGACCTTCAGGCGGTGACAC+GGG | 0.549683 | 5.2:-12666832 | MS.gene64734:CDS |
| GTGCAAGAGATGGGCATCAA+AGG | 0.552347 | 5.2:-12666794 | MS.gene64734:CDS |
| ACATCGGAAACAGCCTTCGC+CGG | 0.557695 | 5.2:+12668930 | None:intergenic |
| ACAATCAAAGCCGGAAACAT+CGG | 0.563364 | 5.2:-12669033 | MS.gene64734:CDS |
| AAGCGCGGTCGTCCGGCGAA+AGG | 0.564717 | 5.2:-12668819 | MS.gene64734:CDS |
| GGGACCTTCAGGCGGTGACA+CGG | 0.565507 | 5.2:-12666833 | MS.gene64734:CDS |
| ACGGCCACCGGAACTGTCGC+CGG | 0.565692 | 5.2:+12668990 | None:intergenic |
| CTTTGCTTGAGTGCAAGAGA+TGG | 0.568824 | 5.2:-12666804 | MS.gene64734:CDS |
| AGAGAAAATAAAGGTTTGTG+TGG | 0.570122 | 5.2:-12667326 | MS.gene64734:CDS |
| GGAAACATCGGCAACTGCAA+CGG | 0.570455 | 5.2:-12669021 | MS.gene64734:CDS |
| CGGGATAGAGCAAGTGAGAA+GGG | 0.572104 | 5.2:-12665328 | MS.gene64734:CDS |
| TGTACGCATTCTTTGTGCAA+GGG | 0.572716 | 5.2:-12667380 | MS.gene64734:CDS |
| TATTGGAAGCTGAGAAATTG+CGG | 0.573970 | 5.2:-12665363 | MS.gene64734:CDS |
| TGCGTCAAAGTATAAAGTAT+GGG | 0.574180 | 5.2:-12665861 | MS.gene64734:CDS |
| TTTGCTTGAGTGCAAGAGAT+GGG | 0.577813 | 5.2:-12666803 | MS.gene64734:CDS |
| TTCCTAAATATGCTAAACTG+TGG | 0.578015 | 5.2:-12665271 | MS.gene64734:CDS |
| ATTTGATTCTATATCTACAC+AGG | 0.578615 | 5.2:+12666879 | None:intergenic |
| ATGTACGCATTCTTTGTGCA+AGG | 0.580030 | 5.2:-12667381 | MS.gene64734:CDS |
| TCACCGCCTGAAGGTCCCTT+AGG | 0.581612 | 5.2:+12666838 | None:intergenic |
| CTGATTGAGAACAGTGCCCA+GGG | 0.582372 | 5.2:-12667281 | MS.gene64734:CDS |
| GTCTGACTGATGATAGTGAA+AGG | 0.583848 | 5.2:-12666321 | MS.gene64734:CDS |
| TTGTCCTAAAGCGTATCATC+CGG | 0.585341 | 5.2:-12668486 | MS.gene64734:CDS |
| TAGTGAAAGGATTCACGAGA+AGG | 0.590332 | 5.2:-12666308 | MS.gene64734:CDS |
| ACATTAACTTGATCTACTTG+CGG | 0.590461 | 5.2:-12666360 | MS.gene64734:CDS |
| TCCTAAATATGCTAAACTGT+GGG | 0.593025 | 5.2:-12665270 | None:intergenic |
| TCGGGATAGAGCAAGTGAGA+AGG | 0.596969 | 5.2:-12665329 | MS.gene64734:CDS |
| GTACGCATTCTTTGTGCAAG+GGG | 0.601761 | 5.2:-12667379 | MS.gene64734:CDS |
| ACTTTCGGAGTTCCTTTCGC+CGG | 0.606950 | 5.2:+12668807 | None:intergenic |
| AAGTTCACATACCTACAACT+TGG | 0.607330 | 5.2:+12666218 | None:intergenic |
| AACTTGCTTCGTCTCCGCCG+CGG | 0.631018 | 5.2:+12668959 | None:intergenic |
| GTGAACATGACGGAGAGAGA+CGG | 0.631033 | 5.2:-12668909 | MS.gene64734:CDS |
| TTTCGATGACAAGAGCAGCT+GGG | 0.637251 | 5.2:-12667067 | MS.gene64734:CDS |
| TCCGCCGAAGCAGATCAAGA+AGG | 0.640783 | 5.2:-12668778 | MS.gene64734:CDS |
| AGTTCCGGCGACAGTTCCGG+TGG | 0.643876 | 5.2:-12668994 | MS.gene64734:CDS |
| TCAAAAGCCAAATGGAATTG+CGG | 0.644100 | 5.2:-12668431 | MS.gene64734:intron |
| ACACCCGTGTCACCGCCTGA+AGG | 0.645434 | 5.2:+12666829 | None:intergenic |
| GTGCGGATAAGAATCTCTAG+TGG | 0.660680 | 5.2:-12666271 | MS.gene64734:CDS |
| TAATTGTGCAGGTACAAGCA+AGG | 0.661666 | 5.2:-12666124 | MS.gene64734:intron |
| TGATGCTGTTGCAAATGGAA+AGG | 0.670038 | 5.2:-12666506 | MS.gene64734:CDS |
| AAGCCTAAGGGACCTTCAGG+CGG | 0.671021 | 5.2:-12666841 | MS.gene64734:CDS |
| TGCTGTTGCAAATGGAAAGG+AGG | 0.671749 | 5.2:-12666503 | MS.gene64734:CDS |
| TCATCTCGCTTGACACACGC+CGG | 0.676664 | 5.2:+12668467 | None:intergenic |
| GCTTTCAAAGAGATTGACTG+TGG | 0.679086 | 5.2:-12665839 | MS.gene64734:intron |
| GGCCGTTACGGAGACCGCGG+CGG | 0.679201 | 5.2:-12668973 | MS.gene64734:CDS |
| TGTTTCCGATGTGAACATGA+CGG | 0.681488 | 5.2:-12668919 | MS.gene64734:CDS |
| TCTCTCCGTCATGTTCACAT+CGG | 0.681784 | 5.2:+12668914 | None:intergenic |
| GGTGGCCGTTACGGAGACCG+CGG | 0.699489 | 5.2:-12668976 | MS.gene64734:CDS |
| TTCGAATCAGGAGTTCTCCG+AGG | 0.712977 | 5.2:-12666008 | MS.gene64734:intron |
| AACATGACGGAGAGAGACGG+CGG | 0.721172 | 5.2:-12668906 | MS.gene64734:CDS |
| GAGGTTATGAAGAAGAAGCG+CGG | 0.742865 | 5.2:-12668834 | MS.gene64734:CDS |
| TGTCATCGCCGAGAACAGTG+AGG | 0.750277 | 5.2:-12668853 | MS.gene64734:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTGAAATTTTAAATTTAAAC+CGG | - | chr5.2:12668252-12668271 | MS.gene64734:intron | 10.0% |
| !! | ATGTATATTCAAACATAATT+TGG | - | chr5.2:12666459-12666478 | MS.gene64734:CDS | 15.0% |
| !!! | ATTTTCTTTTATAAGAAAGT+GGG | + | chr5.2:12667748-12667767 | None:intergenic | 15.0% |
| !!! | GTAAATTTTCTTTTTTTATC+TGG | - | chr5.2:12668627-12668646 | MS.gene64734:intron | 15.0% |
| !!! | TATTTTCTTTTATAAGAAAG+TGG | + | chr5.2:12667749-12667768 | None:intergenic | 15.0% |
| !!! | TTTGAATATACATGATTTTT+AGG | + | chr5.2:12666452-12666471 | None:intergenic | 15.0% |
| !! | AATAACTACATCAATAAAAG+AGG | + | chr5.2:12668930-12668949 | None:intergenic | 20.0% |
| !! | AGTAATTATTTACATGCAAT+TGG | - | chr5.2:12665964-12665983 | MS.gene64734:intron | 20.0% |
| !! | ATATTTAGGAAAGAAGTAAA+TGG | + | chr5.2:12669029-12669048 | None:intergenic | 20.0% |
| !! | ATTAAACCTAAAGAACAAAA+CGG | + | chr5.2:12665924-12665943 | None:intergenic | 20.0% |
| !! | GTTATTCATTAATCATCTAT+TGG | - | chr5.2:12666579-12666598 | MS.gene64734:CDS | 20.0% |
| !! | TTATAGATTCTATCTTAGAT+TGG | - | chr5.2:12665692-12665711 | MS.gene64734:intron | 20.0% |
| !!! | AAATTTTGTGTAATAATGAC+CGG | - | chr5.2:12666243-12666262 | MS.gene64734:CDS | 20.0% |
| !!! | AATTTTAAATTTAAACCGGA+AGG | - | chr5.2:12668256-12668275 | MS.gene64734:intron | 20.0% |
| !!! | AGAATGGAATAATTTTGAAT+TGG | - | chr5.2:12665637-12665656 | MS.gene64734:intron | 20.0% |
| !!! | ATTTTATTTGTGATATTGCT+TGG | - | chr5.2:12665987-12666006 | MS.gene64734:intron | 20.0% |
| !!! | ATTTTGTATGAGGTTTATAA+TGG | - | chr5.2:12668533-12668552 | MS.gene64734:intron | 20.0% |
| !!! | GTCTATTTTTGAAAAAATTG+TGG | - | chr5.2:12666493-12666512 | MS.gene64734:CDS | 20.0% |
| !!! | TCTTTTATTGATGTAGTTAT+TGG | - | chr5.2:12668929-12668948 | MS.gene64734:CDS | 20.0% |
| !!! | TTTTCTTTTATAAGAAAGTG+GGG | + | chr5.2:12667747-12667766 | None:intergenic | 20.0% |
| ! | AAACATACACTTGAAAATCA+TGG | + | chr5.2:12666381-12666400 | None:intergenic | 25.0% |
| ! | AAATCGTTGTTAATTGTGTT+TGG | + | chr5.2:12666345-12666364 | None:intergenic | 25.0% |
| ! | AAGTAATTTCCTATTTACCT+CGG | + | chr5.2:12668321-12668340 | None:intergenic | 25.0% |
| ! | AATATATTTATCCTATGTCC+AGG | - | chr5.2:12668410-12668429 | MS.gene64734:intron | 25.0% |
| ! | ACAAAATATAGCATACTTCA+TGG | + | chr5.2:12668520-12668539 | None:intergenic | 25.0% |
| ! | ACATGTATAGCACATATAAT+GGG | + | chr5.2:12666912-12666931 | None:intergenic | 25.0% |
| ! | AGCATATGGTTAAATTAGTT+CGG | - | chr5.2:12666270-12666289 | MS.gene64734:CDS | 25.0% |
| ! | AGCATGGCATTAAATTATTT+AGG | + | chr5.2:12668751-12668770 | None:intergenic | 25.0% |
| ! | ATGGTCACTTAAATCTAAAA+AGG | - | chr5.2:12666296-12666315 | MS.gene64734:CDS | 25.0% |
| ! | ATTTCCACCAAAAAAAAAAG+AGG | + | chr5.2:12668899-12668918 | None:intergenic | 25.0% |
| ! | ATTTGATTCTATATCTACAC+AGG | + | chr5.2:12667433-12667452 | None:intergenic | 25.0% |
| ! | CATTTAATAACTAATGTACC+TGG | - | chr5.2:12666171-12666190 | MS.gene64734:intron | 25.0% |
| ! | GCAAAAAGAAAGTCTATTAA+AGG | + | chr5.2:12666847-12666866 | None:intergenic | 25.0% |
| ! | GTGATAGATTTCTCAAAATA+AGG | + | chr5.2:12666767-12666786 | None:intergenic | 25.0% |
| ! | GTTAACACAATTCAAATATG+TGG | + | chr5.2:12666615-12666634 | None:intergenic | 25.0% |
| ! | GTTTCTGTTAGAGAAAATAA+AGG | - | chr5.2:12666974-12666993 | MS.gene64734:CDS | 25.0% |
| ! | TAAGTAACATTTCAAAAGCA+TGG | + | chr5.2:12668767-12668786 | None:intergenic | 25.0% |
| ! | TACATGTATAGCACATATAA+TGG | + | chr5.2:12666913-12666932 | None:intergenic | 25.0% |
| ! | TACCATCTTAAAGATGAAAA+AGG | - | chr5.2:12667390-12667409 | MS.gene64734:CDS | 25.0% |
| ! | TATTAAATGAATCTGCAAAG+TGG | + | chr5.2:12666160-12666179 | None:intergenic | 25.0% |
| ! | TGGTTTAGTAATCTGATTTA+CGG | - | chr5.2:12668647-12668666 | MS.gene64734:intron | 25.0% |
| ! | TTTGTCTCACATATGAAAAA+TGG | - | chr5.2:12667549-12667568 | MS.gene64734:intron | 25.0% |
| !! | AGTATGCTATATTTTGTATG+AGG | - | chr5.2:12668523-12668542 | MS.gene64734:intron | 25.0% |
| !! | TCTAGACTAGTAAATTTGTT+TGG | - | chr5.2:12667678-12667697 | MS.gene64734:intron | 25.0% |
| !! | TTTAAGATGGTAAAGTTTGT+GGG | + | chr5.2:12667382-12667401 | None:intergenic | 25.0% |
| !! | TTTCTCTCTTTTCATTTCTA+GGG | - | chr5.2:12665799-12665818 | MS.gene64734:intron | 25.0% |
| !! | TTTTCTCTCTTTTCATTTCT+AGG | - | chr5.2:12665798-12665817 | MS.gene64734:intron | 25.0% |
| !!! | AACCTTTTTCATCTTTAAGA+TGG | + | chr5.2:12667395-12667414 | None:intergenic | 25.0% |
| !!! | ATGAATGCCTCTTTTTTTTT+TGG | - | chr5.2:12668889-12668908 | MS.gene64734:CDS | 25.0% |
| !!! | TATGCATCTTGATTATTTTG+TGG | + | chr5.2:12667909-12667928 | None:intergenic | 25.0% |
| AATTCAATTCAGATGGCATT+TGG | + | chr5.2:12668797-12668816 | None:intergenic | 30.0% | |
| AATTGCGGCTTAATAATCTT+CGG | - | chr5.2:12668961-12668980 | MS.gene64734:CDS | 30.0% | |
| ACAATTAGAGATTTCTGTTG+AGG | + | chr5.2:12667651-12667670 | None:intergenic | 30.0% | |
| AGAGAAAATAAAGGTTTGTG+TGG | - | chr5.2:12666983-12667002 | MS.gene64734:CDS | 30.0% | |
| AGGAAAGAAGTAAATGGTAA+AGG | + | chr5.2:12669023-12669042 | None:intergenic | 30.0% | |
| ATATGGTTAAATTAGTTCGG+TGG | - | chr5.2:12666273-12666292 | MS.gene64734:CDS | 30.0% | |
| CAATGTGTAAAAATTCACTG+AGG | + | chr5.2:12668132-12668151 | None:intergenic | 30.0% | |
| CAATTAGAGATTTCTGTTGA+GGG | + | chr5.2:12667650-12667669 | None:intergenic | 30.0% | |
| CACTTAAATCTAAAAAGGTG+CGG | - | chr5.2:12666301-12666320 | MS.gene64734:CDS | 30.0% | |
| CACTTGAAAATCATGGTTAA+TGG | + | chr5.2:12666374-12666393 | None:intergenic | 30.0% | |
| CTAATCGGCAAATTAACAAA+TGG | + | chr5.2:12666732-12666751 | None:intergenic | 30.0% | |
| CTTAAAGATGAAAAAGGTTC+TGG | - | chr5.2:12667396-12667415 | MS.gene64734:CDS | 30.0% | |
| GCAAATGAAATGATACATGA+TGG | - | chr5.2:12667176-12667195 | MS.gene64734:intron | 30.0% | |
| GGCATTAAATTATTTAGGCA+TGG | + | chr5.2:12668746-12668765 | None:intergenic | 30.0% | |
| TAAGAGATGCACAAGTAAAA+AGG | - | chr5.2:12667869-12667888 | MS.gene64734:intron | 30.0% | |
| TCTCACAAATTCAATTCAGA+TGG | + | chr5.2:12668804-12668823 | None:intergenic | 30.0% | |
| TCTGATATGTATTATAGACC+AGG | + | chr5.2:12666192-12666211 | None:intergenic | 30.0% | |
| TGCGTCAAAGTATAAAGTAT+GGG | - | chr5.2:12668448-12668467 | MS.gene64734:CDS | 30.0% | |
| TGTTTGTAATAGTGACACAA+GGG | + | chr5.2:12666132-12666151 | None:intergenic | 30.0% | |
| TTCCTAAATATGCTAAACTG+TGG | - | chr5.2:12669038-12669057 | MS.gene64734:CDS | 30.0% | |
| TTGAAAAACAAGAAGCCTAA+GGG | - | chr5.2:12667456-12667475 | MS.gene64734:intron | 30.0% | |
| TTGCGTCAAAGTATAAAGTA+TGG | - | chr5.2:12668447-12668466 | MS.gene64734:CDS | 30.0% | |
| TTGTTTGTAATAGTGACACA+AGG | + | chr5.2:12666133-12666152 | None:intergenic | 30.0% | |
| TTTAAATTTAAACCGGAAGG+AGG | - | chr5.2:12668259-12668278 | MS.gene64734:intron | 30.0% | |
| TTTGAAAAACAAGAAGCCTA+AGG | - | chr5.2:12667455-12667474 | MS.gene64734:intron | 30.0% | |
| ! | ACATTAACTTGATCTACTTG+CGG | - | chr5.2:12667949-12667968 | MS.gene64734:intron | 30.0% |
| ! | CTCCAAAATTATTTTCTGCA+GGG | + | chr5.2:12667773-12667792 | None:intergenic | 30.0% |
| ! | GCTAATGATGTTTAAAGTTG+TGG | - | chr5.2:12666515-12666534 | MS.gene64734:CDS | 30.0% |
| ! | TCCAAAATTATTTTCTGCAG+GGG | + | chr5.2:12667772-12667791 | None:intergenic | 30.0% |
| !! | AGTATCTTTTCAAGGTGTAT+TGG | - | chr5.2:12667265-12667284 | MS.gene64734:intron | 30.0% |
| !! | CTTAAACCGTTTTGTTCTTT+AGG | - | chr5.2:12665915-12665934 | MS.gene64734:intron | 30.0% |
| !! | CTTTAAGATGGTAAAGTTTG+TGG | + | chr5.2:12667383-12667402 | None:intergenic | 30.0% |
| !! | TCACGTCTTGAAATTAGTTT+TGG | - | chr5.2:12668158-12668177 | MS.gene64734:intron | 30.0% |
| !! | TTCTCTCTTTTCATTTCTAG+GGG | - | chr5.2:12665800-12665819 | MS.gene64734:intron | 30.0% |
| !!! | AATGCCTCTTTTTTTTTTGG+TGG | - | chr5.2:12668892-12668911 | MS.gene64734:CDS | 30.0% |
| !!! | AATTCCATTTGGCTTTTGAA+CGG | + | chr5.2:12665877-12665896 | None:intergenic | 30.0% |
| !!! | TTCTATCTTAGATTGGCTTT+TGG | - | chr5.2:12665699-12665718 | MS.gene64734:intron | 30.0% |
| AAGTTCACATACCTACAACT+TGG | + | chr5.2:12668094-12668113 | None:intergenic | 35.0% | |
| AAGTTGTGGTTAATTGTGCT+TGG | - | chr5.2:12666529-12666548 | MS.gene64734:CDS | 35.0% | |
| ATTAGTGATGCTGTTGCAAA+TGG | - | chr5.2:12667798-12667817 | MS.gene64734:intron | 35.0% | |
| ATTGCGGCTTAATAATCTTC+GGG | - | chr5.2:12668962-12668981 | MS.gene64734:CDS | 35.0% | |
| GGTTAATTGTGCTTGGTAAA+TGG | - | chr5.2:12666536-12666555 | MS.gene64734:CDS | 35.0% | |
| TAAAGGAAAGCTGCACAATT+TGG | + | chr5.2:12666830-12666849 | None:intergenic | 35.0% | |
| TATAGACTTGTCCAAGTTGT+AGG | - | chr5.2:12668080-12668099 | MS.gene64734:intron | 35.0% | |
| TATTGGAAGCTGAGAAATTG+CGG | - | chr5.2:12668946-12668965 | MS.gene64734:CDS | 35.0% | |
| TCAAAAGCCAAATGGAATTG+CGG | - | chr5.2:12665878-12665897 | MS.gene64734:CDS | 35.0% | |
| TCGTTGTTAATTGTGTTTGG+TGG | + | chr5.2:12666342-12666361 | None:intergenic | 35.0% | |
| TTATAAGAAAGTGGGGTTCA+AGG | + | chr5.2:12667740-12667759 | None:intergenic | 35.0% | |
| TTTGTGTAATAATGACCGGA+GGG | - | chr5.2:12666247-12666266 | MS.gene64734:CDS | 35.0% | |
| ! | AATGGCTGTCTTTGTTTGTA+GGG | - | chr5.2:12668551-12668570 | MS.gene64734:intron | 35.0% |
| ! | ACCCCTGCAGAAAATAATTT+TGG | - | chr5.2:12667768-12667787 | MS.gene64734:intron | 35.0% |
| ! | ATACCATTTCCTTATTTCCC+TGG | + | chr5.2:12667048-12667067 | None:intergenic | 35.0% |
| ! | ATTCACTGAGGTATTAGATG+TGG | + | chr5.2:12668120-12668139 | None:intergenic | 35.0% |
| ! | CAAGGGGTGTATAAAAAATG+CGG | - | chr5.2:12666946-12666965 | MS.gene64734:CDS | 35.0% |
| ! | CGAGTCTTCATATTTTGTAG+AGG | - | chr5.2:12668352-12668371 | MS.gene64734:intron | 35.0% |
| ! | GCTCCAAAATTATTTTCTGC+AGG | + | chr5.2:12667774-12667793 | None:intergenic | 35.0% |
| ! | GTTCTTGTGCCAATTTTGTA+AGG | + | chr5.2:12668218-12668237 | None:intergenic | 35.0% |
| ! | TAATGGCTGTCTTTGTTTGT+AGG | - | chr5.2:12668550-12668569 | MS.gene64734:intron | 35.0% |
| ! | TACCATTTCCTTATTTCCCT+GGG | + | chr5.2:12667047-12667066 | None:intergenic | 35.0% |
| ! | TTTTGTGTAATAATGACCGG+AGG | - | chr5.2:12666246-12666265 | MS.gene64734:CDS | 35.0% |
| !! | GTTTTGGTAACTAATTGTGC+AGG | - | chr5.2:12668174-12668193 | MS.gene64734:intron | 35.0% |
| !! | TCTTGATTATTTTGTGGCAC+AGG | + | chr5.2:12667903-12667922 | None:intergenic | 35.0% |
| !!! | GCAGAAAATAATTTTGGAGC+AGG | - | chr5.2:12667774-12667793 | MS.gene64734:intron | 35.0% |
| ACAATCAAAGCCGGAAACAT+CGG | - | chr5.2:12665276-12665295 | MS.gene64734:CDS | 40.0% | |
| AGGAATGAGTGAGTGCTAAT+CGG | + | chr5.2:12666747-12666766 | None:intergenic | 40.0% | |
| ATGACAGCGAGAACTACTTT+CGG | + | chr5.2:12665442-12665461 | None:intergenic | 40.0% | |
| ATGTACGCATTCTTTGTGCA+AGG | - | chr5.2:12666928-12666947 | MS.gene64734:CDS | 40.0% | |
| ATTTAACCATATGCTCCCTC+CGG | + | chr5.2:12666265-12666284 | None:intergenic | 40.0% | |
| CTTCATAACCTCACTGTTCT+CGG | + | chr5.2:12665467-12665486 | None:intergenic | 40.0% | |
| GAGGGTTTAGCGATTAAGAA+TGG | - | chr5.2:12665621-12665640 | MS.gene64734:intron | 40.0% | |
| GATAGACGAGATTTCGAATC+AGG | - | chr5.2:12668289-12668308 | MS.gene64734:intron | 40.0% | |
| GCTTTCAAAGAGATTGACTG+TGG | - | chr5.2:12668470-12668489 | MS.gene64734:CDS | 40.0% | |
| GGTTGCTGACCTTACAAAAT+TGG | - | chr5.2:12668206-12668225 | MS.gene64734:intron | 40.0% | |
| GTTTGCTTCATTTGCTTCGA+CGG | - | chr5.2:12665565-12665584 | MS.gene64734:intron | 40.0% | |
| TAATCATCTGCAAACTCCCA+TGG | + | chr5.2:12668391-12668410 | None:intergenic | 40.0% | |
| TAATTGTGCAGGTACAAGCA+AGG | - | chr5.2:12668185-12668204 | MS.gene64734:intron | 40.0% | |
| TAGTGAAAGGATTCACGAGA+AGG | - | chr5.2:12668001-12668020 | MS.gene64734:intron | 40.0% | |
| TCATGTGTACCAAGACTGAA+GGG | - | chr5.2:12667139-12667158 | MS.gene64734:intron | 40.0% | |
| TCTTCCGTTCAAAAGCCAAA+TGG | - | chr5.2:12665870-12665889 | MS.gene64734:CDS | 40.0% | |
| TCTTCCTTCTTGATCTGCTT+CGG | + | chr5.2:12665538-12665557 | None:intergenic | 40.0% | |
| TGATGCTGTTGCAAATGGAA+AGG | - | chr5.2:12667803-12667822 | MS.gene64734:intron | 40.0% | |
| TGTACGCATTCTTTGTGCAA+GGG | - | chr5.2:12666929-12666948 | MS.gene64734:CDS | 40.0% | |
| TGTTTCCGATGTGAACATGA+CGG | - | chr5.2:12665390-12665409 | MS.gene64734:intron | 40.0% | |
| TTGTCCTAAAGCGTATCATC+CGG | - | chr5.2:12665823-12665842 | MS.gene64734:intron | 40.0% | |
| TTGTGGGAAGTTTGAACCAT+AGG | + | chr5.2:12667366-12667385 | None:intergenic | 40.0% | |
| TTGTTTGGAAAAGCTCGTCT+TGG | - | chr5.2:12667693-12667712 | MS.gene64734:intron | 40.0% | |
| TTTGCTTGAGTGCAAGAGAT+GGG | - | chr5.2:12667506-12667525 | MS.gene64734:intron | 40.0% | |
| ! | ACTTTCTTTTTGCGCTGTTC+AGG | - | chr5.2:12666854-12666873 | MS.gene64734:CDS | 40.0% |
| ! | GGTTAAATTAGTTCGGTGGA+TGG | - | chr5.2:12666277-12666296 | MS.gene64734:CDS | 40.0% |
| ! | GTCTGACTGATGATAGTGAA+AGG | - | chr5.2:12667988-12668007 | MS.gene64734:intron | 40.0% |
| !! | CAAAGTACCGCAATTCCATT+TGG | + | chr5.2:12665888-12665907 | None:intergenic | 40.0% |
| !!! | AGGTTGTTGGTTCTTTTGTG+CGG | - | chr5.2:12668021-12668040 | MS.gene64734:intron | 40.0% |
| !!! | TCAATGGGTTTTTAGCTCGA+AGG | + | chr5.2:12667332-12667351 | None:intergenic | 40.0% |
| AGGAGTCAAGTGTCTTCCAT+GGG | - | chr5.2:12668372-12668391 | MS.gene64734:intron | 45.0% | |
| AGGAGTTCTCCGAGGTAAAT+AGG | - | chr5.2:12668309-12668328 | MS.gene64734:intron | 45.0% | |
| AGGATTCACGAGAAGGTTGT+TGG | - | chr5.2:12668008-12668027 | MS.gene64734:intron | 45.0% | |
| ATCAAGTTCCCCTTCAGTCT+TGG | + | chr5.2:12667151-12667170 | None:intergenic | 45.0% | |
| ATTTCGATGACAAGAGCAGC+TGG | - | chr5.2:12667241-12667260 | MS.gene64734:intron | 45.0% | |
| CATACTCCAGCAAGAGATTC+TGG | + | chr5.2:12667605-12667624 | None:intergenic | 45.0% | |
| CATGTGTACCAAGACTGAAG+GGG | - | chr5.2:12667140-12667159 | MS.gene64734:intron | 45.0% | |
| CTATCGATATGACCTCCTTC+CGG | + | chr5.2:12668274-12668293 | None:intergenic | 45.0% | |
| CTCATGTGTACCAAGACTGA+AGG | - | chr5.2:12667138-12667157 | MS.gene64734:intron | 45.0% | |
| CTTGCATTCATCCTGGACAT+AGG | + | chr5.2:12668424-12668443 | None:intergenic | 45.0% | |
| CTTTGCTTGAGTGCAAGAGA+TGG | - | chr5.2:12667505-12667524 | MS.gene64734:intron | 45.0% | |
| GAGGTTATGAAGAAGAAGCG+CGG | - | chr5.2:12665475-12665494 | MS.gene64734:intron | 45.0% | |
| GTACGCATTCTTTGTGCAAG+GGG | - | chr5.2:12666930-12666949 | MS.gene64734:CDS | 45.0% | |
| GTGCGGATAAGAATCTCTAG+TGG | - | chr5.2:12668038-12668057 | MS.gene64734:intron | 45.0% | |
| TCTCTCCGTCATGTTCACAT+CGG | + | chr5.2:12665398-12665417 | None:intergenic | 45.0% | |
| TGATGTCCAGAATCTCTTGC+TGG | - | chr5.2:12667596-12667615 | MS.gene64734:intron | 45.0% | |
| TGCCCAGGGAAATAAGGAAA+TGG | - | chr5.2:12667042-12667061 | MS.gene64734:CDS | 45.0% | |
| TGCTGTTGCAAATGGAAAGG+AGG | - | chr5.2:12667806-12667825 | MS.gene64734:intron | 45.0% | |
| TTTCGATGACAAGAGCAGCT+GGG | - | chr5.2:12667242-12667261 | MS.gene64734:intron | 45.0% | |
| ! | GACGAAGCAAGTTGAAGTTC+CGG | - | chr5.2:12665360-12665379 | MS.gene64734:CDS | 45.0% |
| ! | TCTTTTTGCGCTGTTCAGGT+TGG | - | chr5.2:12666858-12666877 | MS.gene64734:CDS | 45.0% |
| !!! | CAGCTGGGAGTATCTTTTCA+AGG | - | chr5.2:12667257-12667276 | MS.gene64734:intron | 45.0% |
| !!! | GCTACTTTTACAGTGTGACG+TGG | - | chr5.2:12667218-12667237 | MS.gene64734:intron | 45.0% |
| !!! | TAAATTTTAATAGTTTATTT+TGG | - | chr5.2:12666799-12666818 | MS.gene64734:CDS | 5.0% |
| !!! | TTAAAATTTAAAACAAATAT+AGG | + | chr5.2:12666789-12666808 | None:intergenic | 5.0% |
| AACTGCAACGGAGACAGTTC+CGG | - | chr5.2:12665300-12665319 | MS.gene64734:CDS | 50.0% | |
| AAGAAGCCTAAGGGACCTTC+AGG | - | chr5.2:12667465-12667484 | MS.gene64734:intron | 50.0% | |
| ACTTTCGGAGTTCCTTTCGC+CGG | + | chr5.2:12665505-12665524 | None:intergenic | 50.0% | |
| ATCGCTAAACCCTCACTCAC+CGG | + | chr5.2:12665615-12665634 | None:intergenic | 50.0% | |
| CGGGATAGAGCAAGTGAGAA+GGG | - | chr5.2:12668981-12669000 | MS.gene64734:CDS | 50.0% | |
| CTGATTGAGAACAGTGCCCA+GGG | - | chr5.2:12667028-12667047 | MS.gene64734:CDS | 50.0% | |
| GAACAGTGCCCAGGGAAATA+AGG | - | chr5.2:12667036-12667055 | MS.gene64734:CDS | 50.0% | |
| GAGGAGTCAAGTGTCTTCCA+TGG | - | chr5.2:12668371-12668390 | MS.gene64734:intron | 50.0% | |
| GCAATCGCTTGCATTCATCC+TGG | + | chr5.2:12668431-12668450 | None:intergenic | 50.0% | |
| GGAAACATCGGCAACTGCAA+CGG | - | chr5.2:12665288-12665307 | MS.gene64734:CDS | 50.0% | |
| GTGCAAGAGATGGGCATCAA+AGG | - | chr5.2:12667515-12667534 | MS.gene64734:intron | 50.0% | |
| GTTGCAGTTGCCGATGTTTC+CGG | + | chr5.2:12665289-12665308 | None:intergenic | 50.0% | |
| TCCTTCTTGATCTGCTTCGG+CGG | + | chr5.2:12665535-12665554 | None:intergenic | 50.0% | |
| TCGGGATAGAGCAAGTGAGA+AGG | - | chr5.2:12668980-12668999 | MS.gene64734:CDS | 50.0% | |
| TGCTTCATTTGCTTCGACGG+TGG | - | chr5.2:12665568-12665587 | MS.gene64734:intron | 50.0% | |
| TTCGAATCAGGAGTTCTCCG+AGG | - | chr5.2:12668301-12668320 | MS.gene64734:intron | 50.0% | |
| ! | GTGAACATGACGGAGAGAGA+CGG | - | chr5.2:12665400-12665419 | MS.gene64734:intron | 50.0% |
| ! | TAATGACCGGAGGGAGCATA+TGG | - | chr5.2:12666256-12666275 | MS.gene64734:CDS | 50.0% |
| AAGCCTAAGGGACCTTCAGG+CGG | - | chr5.2:12667468-12667487 | MS.gene64734:intron | 55.0% | |
| ACATCGGAAACAGCCTTCGC+CGG | + | chr5.2:12665382-12665401 | None:intergenic | 55.0% | |
| ATAGGAGCAGCAGCGCTCAA+TGG | + | chr5.2:12667348-12667367 | None:intergenic | 55.0% | |
| CACGCCGGATGATACGCTTT+AGG | + | chr5.2:12665830-12665849 | None:intergenic | 55.0% | |
| CTACTTGCGGCGAAGTCTGA+TGG | - | chr5.2:12667962-12667981 | MS.gene64734:intron | 55.0% | |
| GAGAGACGGCGGTTGTTGTA+CGG | - | chr5.2:12665414-12665433 | MS.gene64734:intron | 55.0% | |
| GCTGATTGAGAACAGTGCCC+AGG | - | chr5.2:12667027-12667046 | MS.gene64734:CDS | 55.0% | |
| TAGGAGCAGCAGCGCTCAAT+GGG | + | chr5.2:12667347-12667366 | None:intergenic | 55.0% | |
| TCATCTCGCTTGACACACGC+CGG | + | chr5.2:12665845-12665864 | None:intergenic | 55.0% | |
| TCCGCCGAAGCAGATCAAGA+AGG | - | chr5.2:12665531-12665550 | MS.gene64734:intron | 55.0% | |
| TGTCATCGCCGAGAACAGTG+AGG | - | chr5.2:12665456-12665475 | MS.gene64734:intron | 55.0% | |
| TTCTTGATCTGCTTCGGCGG+AGG | + | chr5.2:12665532-12665551 | None:intergenic | 55.0% | |
| ! | AACATGACGGAGAGAGACGG+CGG | - | chr5.2:12665403-12665422 | MS.gene64734:intron | 55.0% |
| ! | ATTGAGCGCTGCTGCTCCTA+TGG | - | chr5.2:12667347-12667366 | MS.gene64734:CDS | 55.0% |
| ! | GCAAGTTGAAGTTCCGGCGA+AGG | - | chr5.2:12665366-12665385 | MS.gene64734:CDS | 55.0% |
| ! | TTCGGCGGAGGAGCTACTTT+CGG | + | chr5.2:12665520-12665539 | None:intergenic | 55.0% |
| GACAGTTCCGGCGACAGTTC+CGG | - | chr5.2:12665312-12665331 | MS.gene64734:CDS | 60.0% | |
| GACAGTTCCGGTGGCCGTTA+CGG | - | chr5.2:12665324-12665343 | MS.gene64734:CDS | 60.0% | |
| GTCTCGTTCTCTGCGATCGC+CGG | - | chr5.2:12665593-12665612 | MS.gene64734:intron | 60.0% | |
| TCACCGCCTGAAGGTCCCTT+AGG | + | chr5.2:12667474-12667493 | None:intergenic | 60.0% | |
| ! | AACTTGCTTCGTCTCCGCCG+CGG | + | chr5.2:12665353-12665372 | None:intergenic | 60.0% |
| ! | GAAGAAGAAGCGCGGTCGTC+CGG | - | chr5.2:12665483-12665502 | MS.gene64734:intron | 60.0% |
| ACACCCGTGTCACCGCCTGA+AGG | + | chr5.2:12667483-12667502 | None:intergenic | 65.0% | |
| AGTTCCGGCGACAGTTCCGG+TGG | - | chr5.2:12665315-12665334 | MS.gene64734:CDS | 65.0% | |
| CTGCGATCGCCGGTGAGTGA+GGG | - | chr5.2:12665603-12665622 | MS.gene64734:intron | 65.0% | |
| GGACCTTCAGGCGGTGACAC+GGG | - | chr5.2:12667477-12667496 | MS.gene64734:intron | 65.0% | |
| GGGACCTTCAGGCGGTGACA+CGG | - | chr5.2:12667476-12667495 | MS.gene64734:intron | 65.0% | |
| TCTGCGATCGCCGGTGAGTG+AGG | - | chr5.2:12665602-12665621 | MS.gene64734:intron | 65.0% | |
| AAGCGCGGTCGTCCGGCGAA+AGG | - | chr5.2:12665490-12665509 | MS.gene64734:intron | 70.0% | |
| ACGGCCACCGGAACTGTCGC+CGG | + | chr5.2:12665322-12665341 | None:intergenic | 70.0% | |
| CTCCGCCGCGGTCTCCGTAA+CGG | + | chr5.2:12665341-12665360 | None:intergenic | 70.0% | |
| GCGGTCTCCGTAACGGCCAC+CGG | + | chr5.2:12665334-12665353 | None:intergenic | 70.0% | |
| GGTGGCCGTTACGGAGACCG+CGG | - | chr5.2:12665333-12665352 | MS.gene64734:CDS | 70.0% | |
| GGCCGTTACGGAGACCGCGG+CGG | - | chr5.2:12665336-12665355 | MS.gene64734:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 12665271 | 12669060 | 12665271 | ID=MS.gene64734 |
| chr5.2 | mRNA | 12665271 | 12669060 | 12665271 | ID=MS.gene64734.t1;Parent=MS.gene64734 |
| chr5.2 | exon | 12668717 | 12669060 | 12668717 | ID=MS.gene64734.t1.exon1;Parent=MS.gene64734.t1 |
| chr5.2 | CDS | 12668717 | 12669060 | 12668717 | ID=cds.MS.gene64734.t1;Parent=MS.gene64734.t1 |
| chr5.2 | exon | 12668432 | 12668511 | 12668432 | ID=MS.gene64734.t1.exon2;Parent=MS.gene64734.t1 |
| chr5.2 | CDS | 12668432 | 12668511 | 12668432 | ID=cds.MS.gene64734.t1;Parent=MS.gene64734.t1 |
| chr5.2 | exon | 12667268 | 12667455 | 12667268 | ID=MS.gene64734.t1.exon3;Parent=MS.gene64734.t1 |
| chr5.2 | CDS | 12667268 | 12667455 | 12667268 | ID=cds.MS.gene64734.t1;Parent=MS.gene64734.t1 |
| chr5.2 | exon | 12666230 | 12667100 | 12666230 | ID=MS.gene64734.t1.exon4;Parent=MS.gene64734.t1 |
| chr5.2 | CDS | 12666230 | 12667100 | 12666230 | ID=cds.MS.gene64734.t1;Parent=MS.gene64734.t1 |
| chr5.2 | exon | 12666125 | 12666135 | 12666125 | ID=MS.gene64734.t1.exon5;Parent=MS.gene64734.t1 |
| chr5.2 | CDS | 12666125 | 12666135 | 12666125 | ID=cds.MS.gene64734.t1;Parent=MS.gene64734.t1 |
| chr5.2 | exon | 12666009 | 12666053 | 12666009 | ID=MS.gene64734.t1.exon6;Parent=MS.gene64734.t1 |
| chr5.2 | CDS | 12666009 | 12666053 | 12666009 | ID=cds.MS.gene64734.t1;Parent=MS.gene64734.t1 |
| chr5.2 | exon | 12665840 | 12665899 | 12665840 | ID=MS.gene64734.t1.exon7;Parent=MS.gene64734.t1 |
| chr5.2 | CDS | 12665840 | 12665899 | 12665840 | ID=cds.MS.gene64734.t1;Parent=MS.gene64734.t1 |
| chr5.2 | exon | 12665709 | 12665759 | 12665709 | ID=MS.gene64734.t1.exon8;Parent=MS.gene64734.t1 |
| chr5.2 | CDS | 12665709 | 12665759 | 12665709 | ID=cds.MS.gene64734.t1;Parent=MS.gene64734.t1 |
| chr5.2 | exon | 12665271 | 12665386 | 12665271 | ID=MS.gene64734.t1.exon9;Parent=MS.gene64734.t1 |
| chr5.2 | CDS | 12665271 | 12665386 | 12665271 | ID=cds.MS.gene64734.t1;Parent=MS.gene64734.t1 |
| Gene Sequence |
| Protein sequence |
