Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64797.t1 | XP_003612212.1 | 98.4 | 377 | 6 | 0 | 1 | 377 | 67 | 443 | 1.30E-211 | 745.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64797.t1 | U3KRF2 | 86.5 | 377 | 51 | 0 | 1 | 377 | 69 | 445 | 3.2e-190 | 665.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64797.t1 | G7JXJ9 | 98.4 | 377 | 6 | 0 | 1 | 377 | 67 | 443 | 9.7e-212 | 745.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene056975 | MS.gene64797 | 0.806913 | 6.53E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene06683 | MS.gene64797 | PPI |
| MS.gene057128 | MS.gene64797 | PPI |
| MS.gene013566 | MS.gene64797 | PPI |
| MS.gene06894 | MS.gene64797 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64797.t1 | MTR_5g022580 | 98.408 | 377 | 6 | 0 | 1 | 377 | 67 | 443 | 0.0 | 767 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64797.t1 | AT5G66120 | 85.205 | 365 | 54 | 0 | 13 | 377 | 78 | 442 | 0.0 | 658 |
| MS.gene64797.t1 | AT5G66120 | 86.012 | 336 | 47 | 0 | 42 | 377 | 3 | 338 | 0.0 | 608 |
Find 105 sgRNAs with CRISPR-Local
Find 387 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGCAGAAGTTATAAAGTA+TGG | 0.237109 | 5.2:+13566906 | MS.gene64797:CDS |
| AGTCAGGGCTACATTGAATT+TGG | 0.243315 | 5.2:+13567615 | MS.gene64797:CDS |
| CACCATTGTTAACGTTGATT+TGG | 0.244416 | 5.2:+13565202 | MS.gene64797:CDS |
| CAACCCGGATCCGATATAAA+TGG | 0.271554 | 5.2:-13565240 | None:intergenic |
| TTATAAAGTATGGGCTCATT+AGG | 0.291558 | 5.2:+13566916 | MS.gene64797:CDS |
| TTGAGACTTATCCTTCTAAA+AGG | 0.299398 | 5.2:+13569824 | MS.gene64797:CDS |
| TTGAATTTGGGTCATACATT+TGG | 0.323104 | 5.2:+13567628 | MS.gene64797:CDS |
| ATAGCATATGCCAGTGCATT+AGG | 0.327626 | 5.2:-13567535 | None:intergenic |
| TCTTCAGTTGGTGGCAAAAC+TGG | 0.330298 | 5.2:+13566771 | MS.gene64797:CDS |
| ACACTCTCAACAGAAACATT+TGG | 0.341474 | 5.2:-13566307 | None:intergenic |
| CACTCTCAACAGAAACATTT+GGG | 0.343857 | 5.2:-13566306 | None:intergenic |
| ACCATTGTTAACGTTGATTT+GGG | 0.350396 | 5.2:+13565203 | MS.gene64797:CDS |
| ATGTCCACAGTCATCATTTC+AGG | 0.366546 | 5.2:-13569668 | None:intergenic |
| TCAGATTCCAACCACTGTTA+TGG | 0.372653 | 5.2:+13566595 | MS.gene64797:CDS |
| ATGAGAGAGAAGGTGGAGTC+AGG | 0.374462 | 5.2:+13567599 | MS.gene64797:CDS |
| TTAACGTTGATTTGGGTAAT+CGG | 0.380324 | 5.2:+13565210 | MS.gene64797:CDS |
| CAAGGCCGAGGTTGTGTCCT+TGG | 0.381716 | 5.2:+13567576 | MS.gene64797:CDS |
| GCCCTTGGAGGTGGTGTGAT+TGG | 0.385690 | 5.2:+13566521 | MS.gene64797:CDS |
| CATGGAGAGGCTGTTGCAGC+TGG | 0.391153 | 5.2:+13569451 | MS.gene64797:CDS |
| ATCATTTCAGGAGGCACAAT+TGG | 0.396114 | 5.2:-13569656 | None:intergenic |
| CCAGAGAGGGAACTGGCATC+AGG | 0.397934 | 5.2:+13566882 | MS.gene64797:CDS |
| GTCAGGGCTACATTGAATTT+GGG | 0.399767 | 5.2:+13567616 | MS.gene64797:CDS |
| CGGAGCTATCCCATTTATAT+CGG | 0.402539 | 5.2:+13565230 | MS.gene64797:CDS |
| GGCTATGGGCAGTGGCTTCA+TGG | 0.408977 | 5.2:+13569433 | MS.gene64797:CDS |
| TATCCCATTTATATCGGATC+CGG | 0.423234 | 5.2:+13565236 | MS.gene64797:CDS |
| CCGTAGTGTTAGTGACAATA+AGG | 0.430212 | 5.2:-13566234 | None:intergenic |
| CCCCTTGGGAAGAACTTGAT+TGG | 0.431232 | 5.2:+13566804 | MS.gene64797:CDS |
| AATTACCTTTGAAGAAGTTC+AGG | 0.444038 | 5.2:-13565272 | None:intergenic |
| CCTGATGCCAGTTCCCTCTC+TGG | 0.447867 | 5.2:-13566882 | None:intergenic |
| TTAACAATGGTGGGAACATC+AGG | 0.460642 | 5.2:-13565191 | None:intergenic |
| TATAAAGTATGGGCTCATTA+GGG | 0.460868 | 5.2:+13566917 | MS.gene64797:CDS |
| ATAGAAACTAGCGTTGGCTA+TGG | 0.484418 | 5.2:+13569418 | MS.gene64797:CDS |
| TCCTTGTACTGCTCACCATC+CGG | 0.486431 | 5.2:-13566337 | None:intergenic |
| TGAGAGAGAAGGTGGAGTCA+GGG | 0.489001 | 5.2:+13567600 | MS.gene64797:CDS |
| GGTATATCAGGTTGATAAGA+AGG | 0.492255 | 5.2:+13569787 | MS.gene64797:intron |
| AACCCGGATCCGATATAAAT+GGG | 0.495824 | 5.2:-13565239 | None:intergenic |
| TAGGTTGATTCTTCAGTTGG+TGG | 0.498341 | 5.2:+13566762 | MS.gene64797:intron |
| CAAGGCCATTGAGTCTCGAT+TGG | 0.499244 | 5.2:+13566478 | MS.gene64797:CDS |
| GTTGTTGATGCTTTAACAAG+TGG | 0.499540 | 5.2:+13566280 | MS.gene64797:CDS |
| CAATAAGGACCTTCTTTCCA+TGG | 0.505079 | 5.2:-13566219 | None:intergenic |
| CTAGCGTTGGCTATGGGCAG+TGG | 0.507771 | 5.2:+13569425 | MS.gene64797:CDS |
| ATATGCAGGCATTAATGGCC+AGG | 0.511276 | 5.2:+13566970 | MS.gene64797:CDS |
| TTGTAGGTTGATTCTTCAGT+TGG | 0.512666 | 5.2:+13566759 | MS.gene64797:intron |
| CCGATCCAATCGAGACTCAA+TGG | 0.515263 | 5.2:-13566483 | None:intergenic |
| ATCCTTCTAAAAGGTTCTCT+AGG | 0.515459 | 5.2:+13569833 | MS.gene64797:CDS |
| TTGCAGAAGTTATAAAGTAT+GGG | 0.520923 | 5.2:+13566907 | MS.gene64797:CDS |
| CTGGTATAAACCATCCCCTT+GGG | 0.525333 | 5.2:+13566790 | MS.gene64797:CDS |
| TACATTACCAGAGAGGGAAC+TGG | 0.528745 | 5.2:+13566875 | MS.gene64797:CDS |
| ACCTGTGCCATAACAGTGGT+TGG | 0.531757 | 5.2:-13566602 | None:intergenic |
| ACCGGATGGTGAGCAGTACA+AGG | 0.533496 | 5.2:+13566336 | MS.gene64797:CDS |
| CAAATCAACGTTAACAATGG+TGG | 0.540010 | 5.2:-13565201 | None:intergenic |
| ACATGTCATACCGCCTCGGT+TGG | 0.540345 | 5.2:+13569579 | MS.gene64797:CDS |
| ATCCCATTTATATCGGATCC+GGG | 0.542219 | 5.2:+13565237 | MS.gene64797:CDS |
| TCAAGTTCTTCCCAAGGGGA+TGG | 0.545666 | 5.2:-13566800 | None:intergenic |
| CGCCAATCACACCACCTCCA+AGG | 0.548112 | 5.2:-13566523 | None:intergenic |
| TAGGCATGTCCATGGAAAGA+AGG | 0.549371 | 5.2:+13566210 | MS.gene64797:intron |
| TAGAAACTAGCGTTGGCTAT+GGG | 0.550835 | 5.2:+13569419 | MS.gene64797:CDS |
| TGGGCAGTGGCTTCATGGAG+AGG | 0.553068 | 5.2:+13569438 | MS.gene64797:CDS |
| TATAATAATAGGCATGTCCA+TGG | 0.555537 | 5.2:+13566202 | MS.gene64797:intron |
| CACGGGAGAATATGACAGAA+AGG | 0.557955 | 5.2:+13569868 | MS.gene64797:CDS |
| CAATGGTGGGAACATCAGGT+TGG | 0.560667 | 5.2:-13565187 | None:intergenic |
| TTGCAGAGATCCTAATGCAC+TGG | 0.562804 | 5.2:+13567525 | MS.gene64797:intron |
| ACTGGTATAAACCATCCCCT+TGG | 0.563182 | 5.2:+13566789 | MS.gene64797:CDS |
| ATAAACCTGAACTTCTTCAA+AGG | 0.564077 | 5.2:+13565267 | MS.gene64797:CDS |
| AAATCAACGTTAACAATGGT+GGG | 0.565138 | 5.2:-13565200 | None:intergenic |
| TCCAACCACTGTTATGGCAC+AGG | 0.567423 | 5.2:+13566601 | MS.gene64797:CDS |
| ACCAATCAAGTTCTTCCCAA+GGG | 0.573622 | 5.2:-13566805 | None:intergenic |
| CACCAATCAAGTTCTTCCCA+AGG | 0.573892 | 5.2:-13566806 | None:intergenic |
| CAGAGAGGGAACTGGCATCA+GGG | 0.581095 | 5.2:+13566883 | MS.gene64797:CDS |
| GCCAATCACACCACCTCCAA+GGG | 0.583987 | 5.2:-13566522 | None:intergenic |
| CTATAAGCACACATTGAGGT+TGG | 0.590057 | 5.2:-13566836 | None:intergenic |
| CCTTATTGTCACTAACACTA+CGG | 0.592911 | 5.2:+13566234 | MS.gene64797:CDS |
| GTTGATAAGAAGGTAGCAGA+TGG | 0.593067 | 5.2:+13569797 | MS.gene64797:CDS |
| TGCACCTTTGTATCTAGACA+AGG | 0.596590 | 5.2:+13566258 | MS.gene64797:CDS |
| TTCAGGTTTATTGAGCAACC+CGG | 0.602424 | 5.2:-13565255 | None:intergenic |
| GTTGACATGTCATACCGCCT+CGG | 0.604970 | 5.2:+13569575 | MS.gene64797:CDS |
| AGAGGCTGTTGCAGCTGGCA+CGG | 0.606315 | 5.2:+13569456 | MS.gene64797:CDS |
| TCCACCTTCTCTCTCATCCA+AGG | 0.607242 | 5.2:-13567593 | None:intergenic |
| ATTAGATACATTACCAGAGA+GGG | 0.613639 | 5.2:+13566869 | MS.gene64797:CDS |
| ATCATGTGAAAACAAGGCCG+AGG | 0.615090 | 5.2:+13567564 | MS.gene64797:CDS |
| TTGAGTCTCGATTGGATCGG+CGG | 0.622236 | 5.2:+13566486 | MS.gene64797:CDS |
| ACCCAAATCAACGTTAACAA+TGG | 0.628458 | 5.2:-13565204 | None:intergenic |
| CTCATCCAAGGACACAACCT+CGG | 0.631144 | 5.2:-13567581 | None:intergenic |
| ACAACCTTGTCTAGATACAA+AGG | 0.633531 | 5.2:-13566262 | None:intergenic |
| GGACATGTTTAAATCTGTCA+TGG | 0.638172 | 5.2:+13569685 | MS.gene64797:CDS |
| TAGGCAATAGAAACTAGCGT+TGG | 0.642948 | 5.2:+13569412 | MS.gene64797:intron |
| AAAGCGATCATGTGAAAACA+AGG | 0.643424 | 5.2:+13567558 | MS.gene64797:CDS |
| TCCTTGGATGAGAGAGAAGG+TGG | 0.653001 | 5.2:+13567592 | MS.gene64797:CDS |
| AACACCACGTAGGAATGAAG+CGG | 0.653409 | 5.2:-13566564 | None:intergenic |
| TGGTGAGCAGTACAAGGACA+TGG | 0.659373 | 5.2:+13566342 | MS.gene64797:CDS |
| TCCACAGTCATCATTTCAGG+AGG | 0.661026 | 5.2:-13569665 | None:intergenic |
| CCATTGAGTCTCGATTGGAT+CGG | 0.669888 | 5.2:+13566483 | MS.gene64797:CDS |
| GGTGTGATTGGCGACATGTG+TGG | 0.672916 | 5.2:+13566533 | MS.gene64797:CDS |
| GTGTCCTTGGATGAGAGAGA+AGG | 0.674887 | 5.2:+13567589 | MS.gene64797:CDS |
| CCAATCAAGTTCTTCCCAAG+GGG | 0.683553 | 5.2:-13566804 | None:intergenic |
| TAAGACCTGTGCCATAACAG+TGG | 0.688059 | 5.2:-13566606 | None:intergenic |
| GTGTCTATAAGCACACATTG+AGG | 0.695429 | 5.2:-13566840 | None:intergenic |
| TCTTATGAAAGTGTTTGACA+AGG | 0.696371 | 5.2:+13566460 | MS.gene64797:CDS |
| GCCTCCTGAAATGATGACTG+TGG | 0.699500 | 5.2:+13569664 | MS.gene64797:CDS |
| CATTAGATACATTACCAGAG+AGG | 0.702812 | 5.2:+13566868 | MS.gene64797:CDS |
| GAATAAAATTAACACCACGT+AGG | 0.705762 | 5.2:-13566574 | None:intergenic |
| TAGAATCATCAATCCAACCG+AGG | 0.718923 | 5.2:-13569592 | None:intergenic |
| CATGTTTAAATCTGTCATGG+CGG | 0.724496 | 5.2:+13569688 | MS.gene64797:CDS |
| GCTGCCGCTTCATTCCTACG+TGG | 0.729031 | 5.2:+13566560 | MS.gene64797:CDS |
| AATCATCAATCCAACCGAGG+CGG | 0.730486 | 5.2:-13569589 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATTAAATTTATAGACAAA+TGG | + | chr5.2:13565682-13565701 | MS.gene64797:intron | 10.0% |
| !! | TATTTCATGTTTATAATAAT+AGG | + | chr5.2:13566191-13566210 | MS.gene64797:intron | 10.0% |
| !! | TCAATTTAATAAATATTAGA+TGG | + | chr5.2:13567828-13567847 | MS.gene64797:intron | 10.0% |
| !! | TTAAAAGAAAATTAAAATAG+GGG | + | chr5.2:13567216-13567235 | MS.gene64797:intron | 10.0% |
| !! | TTACTGTTTATTATATTATT+TGG | + | chr5.2:13567665-13567684 | MS.gene64797:intron | 10.0% |
| !!! | TTTTAAAAACATATATAAGT+AGG | - | chr5.2:13569248-13569267 | None:intergenic | 10.0% |
| !! | AATACAAAATTCAATGAATA+TGG | - | chr5.2:13566735-13566754 | None:intergenic | 15.0% |
| !!! | GATATTATTGAAGATATTTT+AGG | + | chr5.2:13565471-13565490 | MS.gene64797:intron | 15.0% |
| !!! | TTTTTTTTTTTTTGAAGTTG+TGG | + | chr5.2:13565927-13565946 | MS.gene64797:intron | 15.0% |
| !! | AAACTATGATGATTATGAAA+AGG | - | chr5.2:13565909-13565928 | None:intergenic | 20.0% |
| !! | AAATATGTAACATGATGATT+AGG | + | chr5.2:13565952-13565971 | MS.gene64797:intron | 20.0% |
| !! | AAATTCAATGAATATGGAAA+AGG | - | chr5.2:13566729-13566748 | None:intergenic | 20.0% |
| !! | AATATGTAACATGATGATTA+GGG | + | chr5.2:13565953-13565972 | MS.gene64797:intron | 20.0% |
| !! | AATTCAATGAATATGGAAAA+GGG | - | chr5.2:13566728-13566747 | None:intergenic | 20.0% |
| !! | ATAGTCAATTTAATCAAACA+TGG | + | chr5.2:13567883-13567902 | MS.gene64797:intron | 20.0% |
| !! | ATCACATTAATTAAGAAAGT+TGG | + | chr5.2:13565650-13565669 | MS.gene64797:intron | 20.0% |
| !! | GACTAAAAGTTCATTTATAT+TGG | + | chr5.2:13569766-13569785 | MS.gene64797:intron | 20.0% |
| !! | GTATGAAATATTTATAACCT+AGG | + | chr5.2:13567730-13567749 | MS.gene64797:intron | 20.0% |
| !! | TAATACTAATCATCAAACAT+AGG | - | chr5.2:13565351-13565370 | None:intergenic | 20.0% |
| !! | TATCTTCAATAATATCTACA+TGG | - | chr5.2:13565467-13565486 | None:intergenic | 20.0% |
| !! | TTCATTTATATTGGTATATC+AGG | + | chr5.2:13569775-13569794 | MS.gene64797:intron | 20.0% |
| !!! | AAATCTATCTTTTGAAAAAG+GGG | - | chr5.2:13568727-13568746 | None:intergenic | 20.0% |
| !!! | ACGTTCTCAATTTTTAATTA+AGG | + | chr5.2:13565398-13565417 | MS.gene64797:intron | 20.0% |
| !!! | AGAAATCTATCTTTTGAAAA+AGG | - | chr5.2:13568729-13568748 | None:intergenic | 20.0% |
| !!! | ATTTTCCTTATTCTAACATT+TGG | - | chr5.2:13569125-13569144 | None:intergenic | 20.0% |
| !!! | GAAATCTATCTTTTGAAAAA+GGG | - | chr5.2:13568728-13568747 | None:intergenic | 20.0% |
| !!! | GAATTTTGTATTATGTTTGT+AGG | + | chr5.2:13566743-13566762 | MS.gene64797:intron | 20.0% |
| !!! | GATTTAAGTTGTATACTTTT+AGG | + | chr5.2:13565420-13565439 | MS.gene64797:intron | 20.0% |
| !!! | GTAAAAGCAATTTTATTGAT+GGG | + | chr5.2:13567935-13567954 | MS.gene64797:intron | 20.0% |
| !!! | TCTTTATTTTGTGTTTGAAT+TGG | + | chr5.2:13566369-13566388 | MS.gene64797:intron | 20.0% |
| !!! | TGTAAAAGCAATTTTATTGA+TGG | + | chr5.2:13567934-13567953 | MS.gene64797:intron | 20.0% |
| !!! | TTCCAACTTTTACAAATTAT+CGG | + | chr5.2:13567496-13567515 | MS.gene64797:intron | 20.0% |
| ! | AAAGACAATATAACACGAAA+TGG | - | chr5.2:13569205-13569224 | None:intergenic | 25.0% |
| ! | AAGACAATATAACACGAAAT+GGG | - | chr5.2:13569204-13569223 | None:intergenic | 25.0% |
| ! | AGATAGACAAACAAGAAATA+CGG | - | chr5.2:13567428-13567447 | None:intergenic | 25.0% |
| ! | ATATGTAACATGATGATTAG+GGG | + | chr5.2:13565954-13565973 | MS.gene64797:intron | 25.0% |
| ! | CAAACAAGGTTCTATATTTA+GGG | - | chr5.2:13565625-13565644 | None:intergenic | 25.0% |
| ! | GTATTATACAATTTACGTAG+TGG | + | chr5.2:13566083-13566102 | MS.gene64797:intron | 25.0% |
| ! | TAATGTGATTTAGTCAAACA+AGG | - | chr5.2:13565639-13565658 | None:intergenic | 25.0% |
| ! | TACACAGTTACATATTACTT+GGG | + | chr5.2:13567065-13567084 | MS.gene64797:intron | 25.0% |
| ! | TAGTTTCTATTGCCTAAAAA+AGG | - | chr5.2:13569408-13569427 | None:intergenic | 25.0% |
| ! | TCAAACAAGGTTCTATATTT+AGG | - | chr5.2:13565626-13565645 | None:intergenic | 25.0% |
| ! | TTACACAGTTACATATTACT+TGG | + | chr5.2:13567064-13567083 | MS.gene64797:intron | 25.0% |
| ! | TTCATACATCAAGAAAGAAA+AGG | - | chr5.2:13567717-13567736 | None:intergenic | 25.0% |
| ! | TTGCAGAAGTTATAAAGTAT+GGG | + | chr5.2:13566907-13566926 | MS.gene64797:CDS | 25.0% |
| ! | TTTGCAGAAGTTATAAAGTA+TGG | + | chr5.2:13566906-13566925 | MS.gene64797:CDS | 25.0% |
| ! | TTTGTGTTTATTTACACTCT+TGG | + | chr5.2:13566395-13566414 | MS.gene64797:intron | 25.0% |
| !! | AATTTTATGTCAATGTTCAC+AGG | + | chr5.2:13569544-13569563 | MS.gene64797:intron | 25.0% |
| !! | AGAGTAATAGAGCATTATAA+AGG | - | chr5.2:13567477-13567496 | None:intergenic | 25.0% |
| !! | ATTTATCTTTTATCTCTGGT+AGG | - | chr5.2:13568030-13568049 | None:intergenic | 25.0% |
| !! | TACGAAAATGGTATAGTTTT+AGG | - | chr5.2:13567375-13567394 | None:intergenic | 25.0% |
| !!! | AGTTAGTGACATTTTAAAAC+AGG | + | chr5.2:13569625-13569644 | MS.gene64797:CDS | 25.0% |
| !!! | CTTTTAAAAAACTGTAGTAG+TGG | - | chr5.2:13567203-13567222 | None:intergenic | 25.0% |
| !!! | GATTTTAATGTTCTTTCTCA+TGG | + | chr5.2:13569380-13569399 | MS.gene64797:intron | 25.0% |
| !!! | TAACAAGTTTTCAAGAGAAT+TGG | + | chr5.2:13565712-13565731 | MS.gene64797:intron | 25.0% |
| !!! | TACATTTGTTTCTATTCTGA+GGG | + | chr5.2:13569520-13569539 | MS.gene64797:intron | 25.0% |
| AAACAGTAAAACTACTCACA+TGG | - | chr5.2:13567654-13567673 | None:intergenic | 30.0% | |
| AAATCAACGTTAACAATGGT+GGG | - | chr5.2:13565203-13565222 | None:intergenic | 30.0% | |
| AGAAGGATAAATCAGAAGTT+AGG | - | chr5.2:13568657-13568676 | None:intergenic | 30.0% | |
| AGAATTAGTTACAATTGGTG+AGG | - | chr5.2:13568155-13568174 | None:intergenic | 30.0% | |
| AGACAATATAACACGAAATG+GGG | - | chr5.2:13569203-13569222 | None:intergenic | 30.0% | |
| AGGGAAGAATTAGTTACAAT+TGG | - | chr5.2:13568160-13568179 | None:intergenic | 30.0% | |
| AGTAGGACACTATACAATTA+GGG | - | chr5.2:13566122-13566141 | None:intergenic | 30.0% | |
| ATAAACCTGAACTTCTTCAA+AGG | + | chr5.2:13565267-13565286 | MS.gene64797:CDS | 30.0% | |
| ATAAGTAGGCTGAGAAATTA+TGG | - | chr5.2:13569234-13569253 | None:intergenic | 30.0% | |
| ATGCTCCAAATGTTAGAATA+AGG | + | chr5.2:13569117-13569136 | MS.gene64797:intron | 30.0% | |
| ATGGTCAGCATATTAAACAA+TGG | - | chr5.2:13568407-13568426 | None:intergenic | 30.0% | |
| ATGTAACTGTGTAACATACA+TGG | - | chr5.2:13567058-13567077 | None:intergenic | 30.0% | |
| ATGTACAGATACTACGAAAA+TGG | - | chr5.2:13567387-13567406 | None:intergenic | 30.0% | |
| ATTAGATACATTACCAGAGA+GGG | + | chr5.2:13566869-13566888 | MS.gene64797:CDS | 30.0% | |
| CATGTAATGTGAAGTCAAAA+AGG | - | chr5.2:13567129-13567148 | None:intergenic | 30.0% | |
| CCAAGAAAAGGAATAACAAA+GGG | + | chr5.2:13567983-13568002 | MS.gene64797:intron | 30.0% | |
| CCATATATCTCAGCTTAAAA+AGG | - | chr5.2:13568538-13568557 | None:intergenic | 30.0% | |
| CTCAGAATAGAAACAAATGT+AGG | - | chr5.2:13569521-13569540 | None:intergenic | 30.0% | |
| GAAAAATATGCAGGCATTAA+TGG | + | chr5.2:13566965-13566984 | MS.gene64797:CDS | 30.0% | |
| GAAGGATAAATCAGAAGTTA+GGG | - | chr5.2:13568656-13568675 | None:intergenic | 30.0% | |
| GAATAAAATTAACACCACGT+AGG | - | chr5.2:13566577-13566596 | None:intergenic | 30.0% | |
| GACATACAAATGTATAACCT+AGG | - | chr5.2:13567750-13567769 | None:intergenic | 30.0% | |
| GCTCATTGAAATCGTAAAAT+CGG | + | chr5.2:13569061-13569080 | MS.gene64797:intron | 30.0% | |
| GCTTAAACAACATTCATTGA+AGG | - | chr5.2:13568790-13568809 | None:intergenic | 30.0% | |
| TAAGTAGGCTGAGAAATTAT+GGG | - | chr5.2:13569233-13569252 | None:intergenic | 30.0% | |
| TATAAAGTATGGGCTCATTA+GGG | + | chr5.2:13566917-13566936 | MS.gene64797:CDS | 30.0% | |
| TATAAATTACAACTGCCTGA+GGG | - | chr5.2:13568582-13568601 | None:intergenic | 30.0% | |
| TATAATAATAGGCATGTCCA+TGG | + | chr5.2:13566202-13566221 | MS.gene64797:intron | 30.0% | |
| TCAGCATATTAAACAATGGA+TGG | - | chr5.2:13568403-13568422 | None:intergenic | 30.0% | |
| TCTACATGGTGCAATTTAAT+TGG | - | chr5.2:13565453-13565472 | None:intergenic | 30.0% | |
| TTATAAAGTATGGGCTCATT+AGG | + | chr5.2:13566916-13566935 | MS.gene64797:CDS | 30.0% | |
| TTGAATTTGGGTCATACATT+TGG | + | chr5.2:13567628-13567647 | MS.gene64797:CDS | 30.0% | |
| TTGAGACTTATCCTTCTAAA+AGG | + | chr5.2:13569824-13569843 | MS.gene64797:CDS | 30.0% | |
| ! | AAATTGCTACTTAAAGCGAA+AGG | - | chr5.2:13565886-13565905 | None:intergenic | 30.0% |
| ! | AAGATAGATTTCTCCTTTTC+CGG | + | chr5.2:13568736-13568755 | MS.gene64797:intron | 30.0% |
| ! | AATTACCTTTGAAGAAGTTC+AGG | - | chr5.2:13565275-13565294 | None:intergenic | 30.0% |
| ! | ACTCAAAGTAAGATTTTACC+TGG | - | chr5.2:13566991-13567010 | None:intergenic | 30.0% |
| ! | GGAGATTTATCTTTTATCTC+TGG | - | chr5.2:13568034-13568053 | None:intergenic | 30.0% |
| ! | GTGAGGATTATTCATGTTTT+GGG | - | chr5.2:13568072-13568091 | None:intergenic | 30.0% |
| ! | TAGAGCATTATAAAGGCAAT+TGG | - | chr5.2:13567470-13567489 | None:intergenic | 30.0% |
| ! | TGCCGATAATTTGTAAAAGT+TGG | - | chr5.2:13567501-13567520 | None:intergenic | 30.0% |
| ! | TGTGAGGATTATTCATGTTT+TGG | - | chr5.2:13568073-13568092 | None:intergenic | 30.0% |
| ! | TTACTTGGGAAATGTACTTT+TGG | + | chr5.2:13567079-13567098 | MS.gene64797:intron | 30.0% |
| !! | ACCATTGTTAACGTTGATTT+GGG | + | chr5.2:13565203-13565222 | MS.gene64797:CDS | 30.0% |
| !! | ATCTTTTGAAAAAGGGGAAT+GGG | - | chr5.2:13568721-13568740 | None:intergenic | 30.0% |
| !! | CCTTTTTAAGCTGAGATATA+TGG | + | chr5.2:13568535-13568554 | MS.gene64797:intron | 30.0% |
| !! | CTACATTTGTTTCTATTCTG+AGG | + | chr5.2:13569519-13569538 | MS.gene64797:intron | 30.0% |
| !! | GCGATTTTTGGATTTACATT+GGG | + | chr5.2:13569083-13569102 | MS.gene64797:intron | 30.0% |
| !! | TATCTTTTGAAAAAGGGGAA+TGG | - | chr5.2:13568722-13568741 | None:intergenic | 30.0% |
| !! | TCTTATGAAAGTGTTTGACA+AGG | + | chr5.2:13566460-13566479 | MS.gene64797:CDS | 30.0% |
| !! | TGTTGAGAGTGTAATTTTAC+CGG | + | chr5.2:13566318-13566337 | MS.gene64797:CDS | 30.0% |
| !! | TTAACGTTGATTTGGGTAAT+CGG | + | chr5.2:13565210-13565229 | MS.gene64797:CDS | 30.0% |
| !!! | ACACCTTTTGAAACTGTTTA+TGG | - | chr5.2:13568909-13568928 | None:intergenic | 30.0% |
| !!! | CACCTTTTGAAACTGTTTAT+GGG | - | chr5.2:13568908-13568927 | None:intergenic | 30.0% |
| !!! | CCTTTGTTATTCCTTTTCTT+GGG | - | chr5.2:13567985-13568004 | None:intergenic | 30.0% |
| !!! | CTTTGTTATTCCTTTTCTTG+GGG | - | chr5.2:13567984-13568003 | None:intergenic | 30.0% |
| AAAGCGATCATGTGAAAACA+AGG | + | chr5.2:13567558-13567577 | MS.gene64797:CDS | 35.0% | |
| AAGTAGGCTGAGAAATTATG+GGG | - | chr5.2:13569232-13569251 | None:intergenic | 35.0% | |
| ACAACCTTGTCTAGATACAA+AGG | - | chr5.2:13566265-13566284 | None:intergenic | 35.0% | |
| ACACTCTCAACAGAAACATT+TGG | - | chr5.2:13566310-13566329 | None:intergenic | 35.0% | |
| ACATGGAAGAAGCTAGTAAT+AGG | - | chr5.2:13567041-13567060 | None:intergenic | 35.0% | |
| ACCCAAATCAACGTTAACAA+TGG | - | chr5.2:13565207-13565226 | None:intergenic | 35.0% | |
| AGACGAGAAAAAATCTCAAG+AGG | + | chr5.2:13566036-13566055 | MS.gene64797:intron | 35.0% | |
| AGCTGAGATATATGGAAAAC+CGG | + | chr5.2:13568543-13568562 | MS.gene64797:intron | 35.0% | |
| ATACAATTAGGGATGGCAAA+AGG | - | chr5.2:13566111-13566130 | None:intergenic | 35.0% | |
| ATCATGAGGTAGTTTCTTGT+GGG | + | chr5.2:13565814-13565833 | MS.gene64797:intron | 35.0% | |
| ATGTCAATGTTCACAGGTAA+TGG | + | chr5.2:13569550-13569569 | MS.gene64797:intron | 35.0% | |
| ATTAGTTACAATTGGTGAGG+TGG | - | chr5.2:13568152-13568171 | None:intergenic | 35.0% | |
| ATTCTATGCACAATCTGGAT+CGG | + | chr5.2:13569034-13569053 | MS.gene64797:intron | 35.0% | |
| CAAATCAACGTTAACAATGG+TGG | - | chr5.2:13565204-13565223 | None:intergenic | 35.0% | |
| CAAGGTTCTATATTTAGGGA+TGG | - | chr5.2:13565621-13565640 | None:intergenic | 35.0% | |
| CACTCTCAACAGAAACATTT+GGG | - | chr5.2:13566309-13566328 | None:intergenic | 35.0% | |
| CATGTTTAAATCTGTCATGG+CGG | + | chr5.2:13569688-13569707 | MS.gene64797:CDS | 35.0% | |
| CATTAGATACATTACCAGAG+AGG | + | chr5.2:13566868-13566887 | MS.gene64797:CDS | 35.0% | |
| CATTGTAATGCCACTCTTAT+AGG | - | chr5.2:13565503-13565522 | None:intergenic | 35.0% | |
| CCCAAGAAAAGGAATAACAA+AGG | + | chr5.2:13567982-13568001 | MS.gene64797:intron | 35.0% | |
| CCTTATTGTCACTAACACTA+CGG | + | chr5.2:13566234-13566253 | MS.gene64797:CDS | 35.0% | |
| CTCAGCTTAAAAAGGCTATA+GGG | - | chr5.2:13568530-13568549 | None:intergenic | 35.0% | |
| CTCCCATAAACAGTTTCAAA+AGG | + | chr5.2:13568903-13568922 | MS.gene64797:intron | 35.0% | |
| CTGATTTATCCTTCTTGCTA+TGG | + | chr5.2:13568662-13568681 | MS.gene64797:intron | 35.0% | |
| GAGTAGGACACTATACAATT+AGG | - | chr5.2:13566123-13566142 | None:intergenic | 35.0% | |
| GGACATGTTTAAATCTGTCA+TGG | + | chr5.2:13569685-13569704 | MS.gene64797:CDS | 35.0% | |
| GTAAAAAAGCTTTACACCGA+CGG | + | chr5.2:13565543-13565562 | MS.gene64797:intron | 35.0% | |
| GTATAAATTACAACTGCCTG+AGG | - | chr5.2:13568583-13568602 | None:intergenic | 35.0% | |
| GTGAAATTGCAACTGTAGTA+TGG | - | chr5.2:13565380-13565399 | None:intergenic | 35.0% | |
| GTGCATGTTTGTAATTGAGT+AGG | - | chr5.2:13566139-13566158 | None:intergenic | 35.0% | |
| GTTGTTGATGCTTTAACAAG+TGG | + | chr5.2:13566280-13566299 | MS.gene64797:CDS | 35.0% | |
| TATCATAGACTTGAACCATC+AGG | - | chr5.2:13566695-13566714 | None:intergenic | 35.0% | |
| TATCCCATTTATATCGGATC+CGG | + | chr5.2:13565236-13565255 | MS.gene64797:CDS | 35.0% | |
| TCAAGAGGCTCAGATATTTA+GGG | + | chr5.2:13566051-13566070 | MS.gene64797:intron | 35.0% | |
| TCTCAGCTTAAAAAGGCTAT+AGG | - | chr5.2:13568531-13568550 | None:intergenic | 35.0% | |
| TGATTGCTTGTTCAACTGAT+AGG | + | chr5.2:13566433-13566452 | MS.gene64797:intron | 35.0% | |
| TGTGTTTCGTGAACTATTCA+TGG | - | chr5.2:13565753-13565772 | None:intergenic | 35.0% | |
| TTAAACAATGGATGGTGAAG+TGG | - | chr5.2:13568395-13568414 | None:intergenic | 35.0% | |
| ! | ATCCTTCTAAAAGGTTCTCT+AGG | + | chr5.2:13569833-13569852 | MS.gene64797:CDS | 35.0% |
| ! | ATCGTAAAATCGGCGATTTT+TGG | + | chr5.2:13569071-13569090 | MS.gene64797:intron | 35.0% |
| ! | ATGTTGTTTAAGCTGTCTCA+AGG | + | chr5.2:13568797-13568816 | MS.gene64797:intron | 35.0% |
| ! | CAATTGACTTTGTTGCTGTT+CGG | + | chr5.2:13565779-13565798 | MS.gene64797:intron | 35.0% |
| ! | CACCATTGTTAACGTTGATT+TGG | + | chr5.2:13565202-13565221 | MS.gene64797:CDS | 35.0% |
| ! | CTATGAAAAAGTATGCTGAC+CGG | - | chr5.2:13568758-13568777 | None:intergenic | 35.0% |
| ! | TAGAGGAGAGAGTATGTAAT+GGG | - | chr5.2:13568108-13568127 | None:intergenic | 35.0% |
| ! | TCTAGGAAATTGCGTTTTCA+CGG | + | chr5.2:13569850-13569869 | MS.gene64797:CDS | 35.0% |
| ! | TTAGAGGAGAGAGTATGTAA+TGG | - | chr5.2:13568109-13568128 | None:intergenic | 35.0% |
| ! | TTCCTAGAGAACCTTTTAGA+AGG | - | chr5.2:13569838-13569857 | None:intergenic | 35.0% |
| ! | TTTTGCTGAGTTAGTTGACA+GGG | - | chr5.2:13568829-13568848 | None:intergenic | 35.0% |
| ! | TTTTTGCTGAGTTAGTTGAC+AGG | - | chr5.2:13568830-13568849 | None:intergenic | 35.0% |
| !! | AATGTACTTTTGGCTGGAAA+AGG | + | chr5.2:13567089-13567108 | MS.gene64797:intron | 35.0% |
| !! | GATTAATTTGCATATGCCGT+CGG | - | chr5.2:13565562-13565581 | None:intergenic | 35.0% |
| !! | GGCGATTTTTGGATTTACAT+TGG | + | chr5.2:13569082-13569101 | MS.gene64797:intron | 35.0% |
| !! | GGTATATCAGGTTGATAAGA+AGG | + | chr5.2:13569787-13569806 | MS.gene64797:intron | 35.0% |
| !! | TTGTAGGTTGATTCTTCAGT+TGG | + | chr5.2:13566759-13566778 | MS.gene64797:intron | 35.0% |
| !!! | CATGTTTTGGGATACTTTGT+TGG | - | chr5.2:13568060-13568079 | None:intergenic | 35.0% |
| !!! | CCCTTTGTTATTCCTTTTCT+TGG | - | chr5.2:13567986-13568005 | None:intergenic | 35.0% |
| !!! | CTTTTGAAACTGTTTATGGG+AGG | - | chr5.2:13568905-13568924 | None:intergenic | 35.0% |
| !!! | GGGATACAGAATTTTTTGAG+TGG | + | chr5.2:13566937-13566956 | MS.gene64797:CDS | 35.0% |
| !!! | TTTCTCATGGCACCTTTTTT+AGG | + | chr5.2:13569393-13569412 | MS.gene64797:intron | 35.0% |
| AACCAAAGAATTGGTCGTAC+TGG | - | chr5.2:13568986-13569005 | None:intergenic | 40.0% | |
| AACCCGGATCCGATATAAAT+GGG | - | chr5.2:13565242-13565261 | None:intergenic | 40.0% | |
| AATATCTGCTAGGTGGTTAG+AGG | - | chr5.2:13568125-13568144 | None:intergenic | 40.0% | |
| ACATACACTTTCCAAACAGC+TGG | + | chr5.2:13568201-13568220 | MS.gene64797:intron | 40.0% | |
| ACCAATCAAGTTCTTCCCAA+GGG | - | chr5.2:13566808-13566827 | None:intergenic | 40.0% | |
| ACTTTGCATCCGATTGAGTA+AGG | - | chr5.2:13567351-13567370 | None:intergenic | 40.0% | |
| AGCAGAAGAAGACACTACTT+GGG | - | chr5.2:13568364-13568383 | None:intergenic | 40.0% | |
| AGTAGGCTGAGAAATTATGG+GGG | - | chr5.2:13569231-13569250 | None:intergenic | 40.0% | |
| AGTCAGGGCTACATTGAATT+TGG | + | chr5.2:13567615-13567634 | MS.gene64797:CDS | 40.0% | |
| AGTGTATGTCAGGAAAAGGA+AGG | - | chr5.2:13568190-13568209 | None:intergenic | 40.0% | |
| AGTTTCTTGTGGGTGATACA+TGG | + | chr5.2:13565824-13565843 | MS.gene64797:intron | 40.0% | |
| ATAGCATATGCCAGTGCATT+AGG | - | chr5.2:13567538-13567557 | None:intergenic | 40.0% | |
| ATCCAGTACGACCAATTCTT+TGG | + | chr5.2:13568981-13569000 | MS.gene64797:intron | 40.0% | |
| ATCCCATTTATATCGGATCC+GGG | + | chr5.2:13565237-13565256 | MS.gene64797:CDS | 40.0% | |
| ATGTCCACAGTCATCATTTC+AGG | - | chr5.2:13569671-13569690 | None:intergenic | 40.0% | |
| CAATAAGGACCTTCTTTCCA+TGG | - | chr5.2:13566222-13566241 | None:intergenic | 40.0% | |
| CATGGAAATTGAGCTATGAC+AGG | - | chr5.2:13567321-13567340 | None:intergenic | 40.0% | |
| CCGTAGTGTTAGTGACAATA+AGG | - | chr5.2:13566237-13566256 | None:intergenic | 40.0% | |
| CGAACAGCAACAAAGTCAAT+TGG | - | chr5.2:13565781-13565800 | None:intergenic | 40.0% | |
| CGATGCAAAACACCTCAAAA+CGG | + | chr5.2:13569010-13569029 | MS.gene64797:intron | 40.0% | |
| CGGAGCTATCCCATTTATAT+CGG | + | chr5.2:13565230-13565249 | MS.gene64797:CDS | 40.0% | |
| CTATAAGCACACATTGAGGT+TGG | - | chr5.2:13566839-13566858 | None:intergenic | 40.0% | |
| CTCAAGAGGCTCAGATATTT+AGG | + | chr5.2:13566050-13566069 | MS.gene64797:intron | 40.0% | |
| CTTTGCATCCGATTGAGTAA+GGG | - | chr5.2:13567350-13567369 | None:intergenic | 40.0% | |
| GATCATGAGGTAGTTTCTTG+TGG | + | chr5.2:13565813-13565832 | MS.gene64797:intron | 40.0% | |
| GATGCAAAACACCTCAAAAC+GGG | + | chr5.2:13569011-13569030 | MS.gene64797:intron | 40.0% | |
| GCTGAGATATATGGAAAACC+GGG | + | chr5.2:13568544-13568563 | MS.gene64797:intron | 40.0% | |
| GGACACTATACAATTAGGGA+TGG | - | chr5.2:13566118-13566137 | None:intergenic | 40.0% | |
| GTCAGGGCTACATTGAATTT+GGG | + | chr5.2:13567616-13567635 | MS.gene64797:CDS | 40.0% | |
| GTGGCAAGAGAAAAATATGC+AGG | + | chr5.2:13566956-13566975 | MS.gene64797:CDS | 40.0% | |
| GTGTATGTCAGGAAAAGGAA+GGG | - | chr5.2:13568189-13568208 | None:intergenic | 40.0% | |
| GTGTCTATAAGCACACATTG+AGG | - | chr5.2:13566843-13566862 | None:intergenic | 40.0% | |
| GTTTCTTGTGGGTGATACAT+GGG | + | chr5.2:13565825-13565844 | MS.gene64797:intron | 40.0% | |
| TAAATCAGAAGTTAGGGCTC+AGG | - | chr5.2:13568650-13568669 | None:intergenic | 40.0% | |
| TAGAATCATCAATCCAACCG+AGG | - | chr5.2:13569595-13569614 | None:intergenic | 40.0% | |
| TAGGAAGTAGCCTATAAGAG+TGG | + | chr5.2:13565490-13565509 | MS.gene64797:intron | 40.0% | |
| TAGGCAATAGAAACTAGCGT+TGG | + | chr5.2:13569412-13569431 | MS.gene64797:intron | 40.0% | |
| TCAGATTCCAACCACTGTTA+TGG | + | chr5.2:13566595-13566614 | MS.gene64797:CDS | 40.0% | |
| TCCAGACTTTCATGTGGATA+CGG | - | chr5.2:13568244-13568263 | None:intergenic | 40.0% | |
| TGCACCTTTGTATCTAGACA+AGG | + | chr5.2:13566258-13566277 | MS.gene64797:CDS | 40.0% | |
| TGTATGTCAGGAAAAGGAAG+GGG | - | chr5.2:13568188-13568207 | None:intergenic | 40.0% | |
| TTAAATCTGTCATGGCGGTA+TGG | + | chr5.2:13569693-13569712 | MS.gene64797:intron | 40.0% | |
| TTTCTTGTGGGTGATACATG+GGG | + | chr5.2:13565826-13565845 | MS.gene64797:intron | 40.0% | |
| ! | AAAAGTATGCTGACCGGAAA+AGG | - | chr5.2:13568752-13568771 | None:intergenic | 40.0% |
| ! | AGAGGAGAGAGTATGTAATG+GGG | - | chr5.2:13568107-13568126 | None:intergenic | 40.0% |
| ! | AGAGTATGTAATGGGGTGAT+GGG | - | chr5.2:13568100-13568119 | None:intergenic | 40.0% |
| ! | AGGTTGGATTTTTGCTGGAA+AGG | - | chr5.2:13565174-13565193 | None:intergenic | 40.0% |
| ! | ATCATTTCAGGAGGCACAAT+TGG | - | chr5.2:13569659-13569678 | None:intergenic | 40.0% |
| ! | CTAGGAAATTGCGTTTTCAC+GGG | + | chr5.2:13569851-13569870 | MS.gene64797:CDS | 40.0% |
| ! | CTGTTTGGAAAGTGTATGTC+AGG | - | chr5.2:13568200-13568219 | None:intergenic | 40.0% |
| ! | GGAAAGTGTATGTCAGGAAA+AGG | - | chr5.2:13568194-13568213 | None:intergenic | 40.0% |
| ! | GGGAAATTGACTTTGCAACA+AGG | + | chr5.2:13568329-13568348 | MS.gene64797:intron | 40.0% |
| ! | GGTTGGATTTTTGCTGGAAA+GGG | - | chr5.2:13565173-13565192 | None:intergenic | 40.0% |
| ! | GTTGATAAGAAGGTAGCAGA+TGG | + | chr5.2:13569797-13569816 | MS.gene64797:CDS | 40.0% |
| ! | GTTGGATTTTTGCTGGAAAG+GGG | - | chr5.2:13565172-13565191 | None:intergenic | 40.0% |
| ! | TTAACAATGGTGGGAACATC+AGG | - | chr5.2:13565194-13565213 | None:intergenic | 40.0% |
| ! | TTCAGGTTTATTGAGCAACC+CGG | - | chr5.2:13565258-13565277 | None:intergenic | 40.0% |
| ! | TTGGGAAATGTACTTTTGGC+TGG | + | chr5.2:13567083-13567102 | MS.gene64797:intron | 40.0% |
| ! | TTTGGGATACTTTGTTGGCT+AGG | - | chr5.2:13568055-13568074 | None:intergenic | 40.0% |
| !! | ATAGAAACTAGCGTTGGCTA+TGG | + | chr5.2:13569418-13569437 | MS.gene64797:CDS | 40.0% |
| !! | GAGAGTGTAATTTTACCGGA+TGG | + | chr5.2:13566322-13566341 | MS.gene64797:CDS | 40.0% |
| !! | GGAGTATTGATAGGACTCAT+GGG | - | chr5.2:13568272-13568291 | None:intergenic | 40.0% |
| !! | TAGAAACTAGCGTTGGCTAT+GGG | + | chr5.2:13569419-13569438 | MS.gene64797:CDS | 40.0% |
| !! | TAGGTTGATTCTTCAGTTGG+TGG | + | chr5.2:13566762-13566781 | MS.gene64797:intron | 40.0% |
| !! | TGAACAGTTGTTGGCTTCAA+GGG | - | chr5.2:13568442-13568461 | None:intergenic | 40.0% |
| !!! | ACATCAGGTTGGATTTTTGC+TGG | - | chr5.2:13565179-13565198 | None:intergenic | 40.0% |
| !!! | CGTTTTGAGGTGTTTTGCAT+CGG | - | chr5.2:13569012-13569031 | None:intergenic | 40.0% |
| AACACCACGTAGGAATGAAG+CGG | - | chr5.2:13566567-13566586 | None:intergenic | 45.0% | |
| AAGTTAGGGCTCAGGTTCTT+CGG | - | chr5.2:13568642-13568661 | None:intergenic | 45.0% | |
| AATCATCAATCCAACCGAGG+CGG | - | chr5.2:13569592-13569611 | None:intergenic | 45.0% | |
| ACGGGATTCTATGCACAATC+TGG | + | chr5.2:13569029-13569048 | MS.gene64797:intron | 45.0% | |
| ACTGGTATAAACCATCCCCT+TGG | + | chr5.2:13566789-13566808 | MS.gene64797:CDS | 45.0% | |
| AGCAAAAACAGCCTCAACTC+TGG | + | chr5.2:13568842-13568861 | MS.gene64797:intron | 45.0% | |
| AGGCTCAGATATTTAGGGAC+AGG | + | chr5.2:13566056-13566075 | MS.gene64797:intron | 45.0% | |
| AGGTGGCATGAATATCTGCT+AGG | - | chr5.2:13568135-13568154 | None:intergenic | 45.0% | |
| ATATGCAGGCATTAATGGCC+AGG | + | chr5.2:13566970-13566989 | MS.gene64797:CDS | 45.0% | |
| ATCATGTGAAAACAAGGCCG+AGG | + | chr5.2:13567564-13567583 | MS.gene64797:CDS | 45.0% | |
| ATTCTTTCCACCACCGGAAA+AGG | + | chr5.2:13568615-13568634 | MS.gene64797:intron | 45.0% | |
| ATTGGTCGTACTGGATTCCA+TGG | - | chr5.2:13568977-13568996 | None:intergenic | 45.0% | |
| ATTTCCCAATCTGAGCCTTG+AGG | - | chr5.2:13568316-13568335 | None:intergenic | 45.0% | |
| CAACCCGGATCCGATATAAA+TGG | - | chr5.2:13565243-13565262 | None:intergenic | 45.0% | |
| CAATGGATGGTGAAGTGGAA+AGG | - | chr5.2:13568390-13568409 | None:intergenic | 45.0% | |
| CACCAATCAAGTTCTTCCCA+AGG | - | chr5.2:13566809-13566828 | None:intergenic | 45.0% | |
| CACGGGAGAATATGACAGAA+AGG | + | chr5.2:13569868-13569887 | MS.gene64797:CDS | 45.0% | |
| CATCGGAGCAACCAAAGAAT+TGG | - | chr5.2:13568995-13569014 | None:intergenic | 45.0% | |
| CCAATCAAGTTCTTCCCAAG+GGG | - | chr5.2:13566807-13566826 | None:intergenic | 45.0% | |
| CCAGACTTTCATGTGGATAC+GGG | - | chr5.2:13568243-13568262 | None:intergenic | 45.0% | |
| CCATTGAGTCTCGATTGGAT+CGG | + | chr5.2:13566483-13566502 | MS.gene64797:CDS | 45.0% | |
| CTGGTATAAACCATCCCCTT+GGG | + | chr5.2:13566790-13566809 | MS.gene64797:CDS | 45.0% | |
| CTTGAAGCCAACAACTGTTC+AGG | + | chr5.2:13568441-13568460 | MS.gene64797:intron | 45.0% | |
| GAGCAGAAGAAGACACTACT+TGG | - | chr5.2:13568365-13568384 | None:intergenic | 45.0% | |
| GATATCGTGATGTTTACGCG+AGG | + | chr5.2:13565857-13565876 | MS.gene64797:intron | 45.0% | |
| GATCCTATTCTTTCCACCAC+CGG | + | chr5.2:13568609-13568628 | MS.gene64797:intron | 45.0% | |
| GGAATAAACGCGAGATCATG+AGG | + | chr5.2:13565800-13565819 | MS.gene64797:intron | 45.0% | |
| GTATGTCAGGAAAAGGAAGG+GGG | - | chr5.2:13568187-13568206 | None:intergenic | 45.0% | |
| GTGCATTAGGATCTCTGCAA+TGG | - | chr5.2:13567525-13567544 | None:intergenic | 45.0% | |
| TAAGACCTGTGCCATAACAG+TGG | - | chr5.2:13566609-13566628 | None:intergenic | 45.0% | |
| TACATTACCAGAGAGGGAAC+TGG | + | chr5.2:13566875-13566894 | MS.gene64797:CDS | 45.0% | |
| TAGGCATGTCCATGGAAAGA+AGG | + | chr5.2:13566210-13566229 | MS.gene64797:intron | 45.0% | |
| TATGCGCTGTGTTATCCTGA+TGG | + | chr5.2:13566677-13566696 | MS.gene64797:intron | 45.0% | |
| TATGTCAGGAAAAGGAAGGG+GGG | - | chr5.2:13568186-13568205 | None:intergenic | 45.0% | |
| TCAAGGGAAGTCGTAAAGGA+TGG | - | chr5.2:13568426-13568445 | None:intergenic | 45.0% | |
| TCCACAGTCATCATTTCAGG+AGG | - | chr5.2:13569668-13569687 | None:intergenic | 45.0% | |
| TCCACATGAAAGTCTGGATC+AGG | + | chr5.2:13568246-13568265 | MS.gene64797:intron | 45.0% | |
| TGGCATGAATATCTGCTAGG+TGG | - | chr5.2:13568132-13568151 | None:intergenic | 45.0% | |
| TGTGTGCTCCCTTACTCAAT+CGG | + | chr5.2:13567339-13567358 | MS.gene64797:intron | 45.0% | |
| TTCTTTCCACCACCGGAAAA+GGG | + | chr5.2:13568616-13568635 | MS.gene64797:intron | 45.0% | |
| TTGCAGAGATCCTAATGCAC+TGG | + | chr5.2:13567525-13567544 | MS.gene64797:intron | 45.0% | |
| TTGGTCGTACTGGATTCCAT+GGG | - | chr5.2:13568976-13568995 | None:intergenic | 45.0% | |
| TTGTACCACAATTCTGCCCA+TGG | + | chr5.2:13568957-13568976 | MS.gene64797:intron | 45.0% | |
| TTGTCCTCAAGGCTCAGATT+GGG | + | chr5.2:13568309-13568328 | MS.gene64797:intron | 45.0% | |
| ! | ACAACATTCATTGAAGGCGC+AGG | - | chr5.2:13568784-13568803 | None:intergenic | 45.0% |
| ! | ATTGAGTAAGGGAGCACACA+TGG | - | chr5.2:13567339-13567358 | None:intergenic | 45.0% |
| ! | CGCTCTTTTACCCCAAGAAA+AGG | + | chr5.2:13567971-13567990 | MS.gene64797:intron | 45.0% |
| ! | GAGAGTATGTAATGGGGTGA+TGG | - | chr5.2:13568101-13568120 | None:intergenic | 45.0% |
| ! | GAGTATGTAATGGGGTGATG+GGG | - | chr5.2:13568099-13568118 | None:intergenic | 45.0% |
| ! | GTGCATAGAATCCCGTTTTG+AGG | - | chr5.2:13569025-13569044 | None:intergenic | 45.0% |
| !! | ACCACTTTTCATGCTTCGAC+GGG | - | chr5.2:13568936-13568955 | None:intergenic | 45.0% |
| !! | CACCACTTTTCATGCTTCGA+CGG | - | chr5.2:13568937-13568956 | None:intergenic | 45.0% |
| !! | CTGAACAGTTGTTGGCTTCA+AGG | - | chr5.2:13568443-13568462 | None:intergenic | 45.0% |
| !! | GGGAGTATTGATAGGACTCA+TGG | - | chr5.2:13568273-13568292 | None:intergenic | 45.0% |
| !! | TCTTCAGTTGGTGGCAAAAC+TGG | + | chr5.2:13566771-13566790 | MS.gene64797:CDS | 45.0% |
| !! | TGGAAAAGGCATCTCTAGCT+TGG | + | chr5.2:13567103-13567122 | MS.gene64797:intron | 45.0% |
| !! | TTCTTGCTATGGTTTGCTGC+CGG | + | chr5.2:13568673-13568692 | MS.gene64797:intron | 45.0% |
| !! | TTTCCGGTGGTGGAAAGAAT+AGG | - | chr5.2:13568615-13568634 | None:intergenic | 45.0% |
| !! | TTTAAAAGAAAATTAAAATA+GGG | + | chr5.2:13567215-13567234 | MS.gene64797:intron | 5.0% |
| !!! | TTTTAAAAGAAAATTAAAAT+AGG | + | chr5.2:13567214-13567233 | MS.gene64797:intron | 5.0% |
| AACAGACTTGCCAGAAGGGT+TGG | - | chr5.2:13568493-13568512 | None:intergenic | 50.0% | |
| ACCTGTGCCATAACAGTGGT+TGG | - | chr5.2:13566605-13566624 | None:intergenic | 50.0% | |
| ATGAGAGAGAAGGTGGAGTC+AGG | + | chr5.2:13567599-13567618 | MS.gene64797:CDS | 50.0% | |
| ATGCACAATCTGGATCGGTG+AGG | + | chr5.2:13569039-13569058 | MS.gene64797:intron | 50.0% | |
| ATGGAAAACCGGGTGAACTC+TGG | + | chr5.2:13568554-13568573 | MS.gene64797:intron | 50.0% | |
| CAAGGCCATTGAGTCTCGAT+TGG | + | chr5.2:13566478-13566497 | MS.gene64797:CDS | 50.0% | |
| CCACAACAGACTTGCCAGAA+GGG | - | chr5.2:13568497-13568516 | None:intergenic | 50.0% | |
| CCCCTTGGGAAGAACTTGAT+TGG | + | chr5.2:13566804-13566823 | MS.gene64797:CDS | 50.0% | |
| CCCGTATCCACATGAAAGTC+TGG | + | chr5.2:13568240-13568259 | MS.gene64797:intron | 50.0% | |
| CCGATCCAATCGAGACTCAA+TGG | - | chr5.2:13566486-13566505 | None:intergenic | 50.0% | |
| CCTTGCAAGAATCGAACCAG+AGG | + | chr5.2:13568870-13568889 | MS.gene64797:intron | 50.0% | |
| CGAGGAACCTGAACAGTTGT+TGG | - | chr5.2:13568451-13568470 | None:intergenic | 50.0% | |
| CTCATCCAAGGACACAACCT+CGG | - | chr5.2:13567584-13567603 | None:intergenic | 50.0% | |
| CTGGTAGGAGTCATAGACTC+TGG | - | chr5.2:13568015-13568034 | None:intergenic | 50.0% | |
| CTTGTCCTCAAGGCTCAGAT+TGG | + | chr5.2:13568308-13568327 | MS.gene64797:intron | 50.0% | |
| GCAAGGAGAAACCAGAGTTG+AGG | - | chr5.2:13568856-13568875 | None:intergenic | 50.0% | |
| GCCTCCTGAAATGATGACTG+TGG | + | chr5.2:13569664-13569683 | MS.gene64797:CDS | 50.0% | |
| GCCTGATCCAGACTTTCATG+TGG | - | chr5.2:13568250-13568269 | None:intergenic | 50.0% | |
| GGATTCCATGGGCAGAATTG+TGG | - | chr5.2:13568965-13568984 | None:intergenic | 50.0% | |
| GGCAGCAAACCATAGCAAGA+AGG | - | chr5.2:13568674-13568693 | None:intergenic | 50.0% | |
| GGCTTCAAGGGAAGTCGTAA+AGG | - | chr5.2:13568430-13568449 | None:intergenic | 50.0% | |
| GTGTCCTTGGATGAGAGAGA+AGG | + | chr5.2:13567589-13567608 | MS.gene64797:CDS | 50.0% | |
| GTTGACATGTCATACCGCCT+CGG | + | chr5.2:13569575-13569594 | MS.gene64797:CDS | 50.0% | |
| TCAAGTTCTTCCCAAGGGGA+TGG | - | chr5.2:13566803-13566822 | None:intergenic | 50.0% | |
| TCCAACCACTGTTATGGCAC+AGG | + | chr5.2:13566601-13566620 | MS.gene64797:CDS | 50.0% | |
| TCCACCTTCTCTCTCATCCA+AGG | - | chr5.2:13567596-13567615 | None:intergenic | 50.0% | |
| TCCTTGGATGAGAGAGAAGG+TGG | + | chr5.2:13567592-13567611 | MS.gene64797:CDS | 50.0% | |
| TCCTTGTACTGCTCACCATC+CGG | - | chr5.2:13566340-13566359 | None:intergenic | 50.0% | |
| TGAGAGAGAAGGTGGAGTCA+GGG | + | chr5.2:13567600-13567619 | MS.gene64797:CDS | 50.0% | |
| TGCAAGAATCGAACCAGAGG+CGG | + | chr5.2:13568873-13568892 | MS.gene64797:intron | 50.0% | |
| TGGTGAGCAGTACAAGGACA+TGG | + | chr5.2:13566342-13566361 | MS.gene64797:CDS | 50.0% | |
| TTGAGTCTCGATTGGATCGG+CGG | + | chr5.2:13566486-13566505 | MS.gene64797:CDS | 50.0% | |
| ! | ACTTTTGTTGCCCTTGGAGG+TGG | + | chr5.2:13566512-13566531 | MS.gene64797:CDS | 50.0% |
| ! | AGGAAAAGGAAGGGGGGTAT+AGG | - | chr5.2:13568180-13568199 | None:intergenic | 50.0% |
| ! | CAATGGTGGGAACATCAGGT+TGG | - | chr5.2:13565190-13565209 | None:intergenic | 50.0% |
| ! | CACTTTTCATGCTTCGACGG+GGG | - | chr5.2:13568934-13568953 | None:intergenic | 50.0% |
| ! | CCTCTGGTTCGATTCTTGCA+AGG | - | chr5.2:13568873-13568892 | None:intergenic | 50.0% |
| ! | GGAAAAGGAAGGGGGGTATA+GGG | - | chr5.2:13568179-13568198 | None:intergenic | 50.0% |
| ! | TCCAAACAGCTGGCCTATGA+GGG | + | chr5.2:13568211-13568230 | MS.gene64797:intron | 50.0% |
| ! | TGCACTTTTGTTGCCCTTGG+AGG | + | chr5.2:13566509-13566528 | MS.gene64797:CDS | 50.0% |
| ! | TTCCAAACAGCTGGCCTATG+AGG | + | chr5.2:13568210-13568229 | MS.gene64797:intron | 50.0% |
| !! | CCACTTTTCATGCTTCGACG+GGG | - | chr5.2:13568935-13568954 | None:intergenic | 50.0% |
| AAGAATCGAACCAGAGGCGG+AGG | + | chr5.2:13568876-13568895 | MS.gene64797:intron | 55.0% | |
| AAGGGTTGGAGGTTGAGCCT+GGG | - | chr5.2:13568479-13568498 | None:intergenic | 55.0% | |
| ACAAGACTGCTTGCGACGGA+GGG | - | chr5.2:13568293-13568312 | None:intergenic | 55.0% | |
| ACATGTCATACCGCCTCGGT+TGG | + | chr5.2:13569579-13569598 | MS.gene64797:CDS | 55.0% | |
| ACCCTCATAGGCCAGCTGTT+TGG | - | chr5.2:13568215-13568234 | None:intergenic | 55.0% | |
| ACCGGATGGTGAGCAGTACA+AGG | + | chr5.2:13566336-13566355 | MS.gene64797:CDS | 55.0% | |
| AGACTTGCCAGAAGGGTTGG+AGG | - | chr5.2:13568490-13568509 | None:intergenic | 55.0% | |
| CAGAGAGGGAACTGGCATCA+GGG | + | chr5.2:13566883-13566902 | MS.gene64797:CDS | 55.0% | |
| CCCCGTCGAAGCATGAAAAG+TGG | + | chr5.2:13568932-13568951 | MS.gene64797:intron | 55.0% | |
| CCCTTCTGGCAAGTCTGTTG+TGG | + | chr5.2:13568494-13568513 | MS.gene64797:intron | 55.0% | |
| CTTTCATGTGGATACGGGCG+TGG | - | chr5.2:13568238-13568257 | None:intergenic | 55.0% | |
| GAGGACAAGACTGCTTGCGA+CGG | - | chr5.2:13568297-13568316 | None:intergenic | 55.0% | |
| GCCAATCACACCACCTCCAA+GGG | - | chr5.2:13566525-13566544 | None:intergenic | 55.0% | |
| GCCACAACAGACTTGCCAGA+AGG | - | chr5.2:13568498-13568517 | None:intergenic | 55.0% | |
| GGTGTGATTGGCGACATGTG+TGG | + | chr5.2:13566533-13566552 | MS.gene64797:CDS | 55.0% | |
| ! | CAGGTTCTTCGGCCCTTTTC+CGG | - | chr5.2:13568631-13568650 | None:intergenic | 55.0% |
| ! | CGCAAGCAGTCTTGTCCTCA+AGG | + | chr5.2:13568298-13568317 | MS.gene64797:intron | 55.0% |
| ! | CGGTGCACTTTTGTTGCCCT+TGG | + | chr5.2:13566506-13566525 | MS.gene64797:CDS | 55.0% |
| !! | GCGACGGAGGGAGTATTGAT+AGG | - | chr5.2:13568281-13568300 | None:intergenic | 55.0% |
| AGAGGCTGTTGCAGCTGGCA+CGG | + | chr5.2:13569456-13569475 | MS.gene64797:CDS | 60.0% | |
| AGGGTTGGAGGTTGAGCCTG+GGG | - | chr5.2:13568478-13568497 | None:intergenic | 60.0% | |
| ATACGGGCGTGGACCCTCAT+AGG | - | chr5.2:13568227-13568246 | None:intergenic | 60.0% | |
| CAAGGCCGAGGTTGTGTCCT+TGG | + | chr5.2:13567576-13567595 | MS.gene64797:CDS | 60.0% | |
| CATGGAGAGGCTGTTGCAGC+TGG | + | chr5.2:13569451-13569470 | MS.gene64797:CDS | 60.0% | |
| CCAGAGAGGGAACTGGCATC+AGG | + | chr5.2:13566882-13566901 | MS.gene64797:CDS | 60.0% | |
| CCTGATGCCAGTTCCCTCTC+TGG | - | chr5.2:13566885-13566904 | None:intergenic | 60.0% | |
| CGCCAATCACACCACCTCCA+AGG | - | chr5.2:13566526-13566545 | None:intergenic | 60.0% | |
| GAAGGGTTGGAGGTTGAGCC+TGG | - | chr5.2:13568480-13568499 | None:intergenic | 60.0% | |
| GACAAGACTGCTTGCGACGG+AGG | - | chr5.2:13568294-13568313 | None:intergenic | 60.0% | |
| GCCCTTGGAGGTGGTGTGAT+TGG | + | chr5.2:13566521-13566540 | MS.gene64797:CDS | 60.0% | |
| GGCTATGGGCAGTGGCTTCA+TGG | + | chr5.2:13569433-13569452 | MS.gene64797:CDS | 60.0% | |
| GGCTCAACCTCCAACCCTTC+TGG | + | chr5.2:13568480-13568499 | MS.gene64797:intron | 60.0% | |
| TCAGGTTCCTCGATGTCCCC+AGG | + | chr5.2:13568459-13568478 | MS.gene64797:intron | 60.0% | |
| TGGGCAGTGGCTTCATGGAG+AGG | + | chr5.2:13569438-13569457 | MS.gene64797:CDS | 60.0% | |
| ! | GCTGCCGCTTCATTCCTACG+TGG | + | chr5.2:13566560-13566579 | MS.gene64797:CDS | 60.0% |
| ! | GTTCTTCGGCCCTTTTCCGG+TGG | - | chr5.2:13568628-13568647 | None:intergenic | 60.0% |
| ! | TTCTCAAGTTGCGCCCGCAC+CGG | - | chr5.2:13568695-13568714 | None:intergenic | 60.0% |
| !! | CTAGCGTTGGCTATGGGCAG+TGG | + | chr5.2:13569425-13569444 | MS.gene64797:CDS | 60.0% |
| !! | CTATGGTTTGCTGCCGGTGC+GGG | + | chr5.2:13568679-13568698 | MS.gene64797:intron | 60.0% |
| !! | GCTATGGTTTGCTGCCGGTG+CGG | + | chr5.2:13568678-13568697 | MS.gene64797:intron | 60.0% |
| !! | TGAGGGTGCCAGAGTTCACC+CGG | - | chr5.2:13568565-13568584 | None:intergenic | 60.0% |
| !! | TGGGGTGATGGGGAGTTGTG+AGG | - | chr5.2:13568089-13568108 | None:intergenic | 60.0% |
| GGGTGAACTCTGGCACCCTC+AGG | + | chr5.2:13568564-13568583 | MS.gene64797:intron | 65.0% | |
| GGTTGAGCCTGGGGACATCG+AGG | - | chr5.2:13568469-13568488 | None:intergenic | 65.0% | |
| TGGGAGGAAACCTCCGCCTC+TGG | - | chr5.2:13568889-13568908 | None:intergenic | 65.0% | |
| ! | CTTCGGCCCTTTTCCGGTGG+TGG | - | chr5.2:13568625-13568644 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 13565164 | 13569928 | 13565164 | ID=MS.gene64797 |
| chr5.2 | mRNA | 13565164 | 13569928 | 13565164 | ID=MS.gene64797.t1;Parent=MS.gene64797 |
| chr5.2 | exon | 13565164 | 13565288 | 13565164 | ID=MS.gene64797.t1.exon1;Parent=MS.gene64797.t1 |
| chr5.2 | CDS | 13565164 | 13565288 | 13565164 | ID=cds.MS.gene64797.t1;Parent=MS.gene64797.t1 |
| chr5.2 | exon | 13566213 | 13566363 | 13566213 | ID=MS.gene64797.t1.exon2;Parent=MS.gene64797.t1 |
| chr5.2 | CDS | 13566213 | 13566363 | 13566213 | ID=cds.MS.gene64797.t1;Parent=MS.gene64797.t1 |
| chr5.2 | exon | 13566455 | 13566622 | 13566455 | ID=MS.gene64797.t1.exon3;Parent=MS.gene64797.t1 |
| chr5.2 | CDS | 13566455 | 13566622 | 13566455 | ID=cds.MS.gene64797.t1;Parent=MS.gene64797.t1 |
| chr5.2 | exon | 13566765 | 13566991 | 13566765 | ID=MS.gene64797.t1.exon4;Parent=MS.gene64797.t1 |
| chr5.2 | CDS | 13566765 | 13566991 | 13566765 | ID=cds.MS.gene64797.t1;Parent=MS.gene64797.t1 |
| chr5.2 | exon | 13567531 | 13567654 | 13567531 | ID=MS.gene64797.t1.exon5;Parent=MS.gene64797.t1 |
| chr5.2 | CDS | 13567531 | 13567654 | 13567531 | ID=cds.MS.gene64797.t1;Parent=MS.gene64797.t1 |
| chr5.2 | exon | 13569415 | 13569477 | 13569415 | ID=MS.gene64797.t1.exon6;Parent=MS.gene64797.t1 |
| chr5.2 | CDS | 13569415 | 13569477 | 13569415 | ID=cds.MS.gene64797.t1;Parent=MS.gene64797.t1 |
| chr5.2 | exon | 13569566 | 13569709 | 13569566 | ID=MS.gene64797.t1.exon7;Parent=MS.gene64797.t1 |
| chr5.2 | CDS | 13569566 | 13569709 | 13569566 | ID=cds.MS.gene64797.t1;Parent=MS.gene64797.t1 |
| chr5.2 | exon | 13569797 | 13569928 | 13569797 | ID=MS.gene64797.t1.exon8;Parent=MS.gene64797.t1 |
| chr5.2 | CDS | 13569797 | 13569928 | 13569797 | ID=cds.MS.gene64797.t1;Parent=MS.gene64797.t1 |
| Gene Sequence |
| Protein sequence |
