Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64869.t1 | XP_003612337.2 | 97.5 | 591 | 15 | 0 | 1 | 591 | 1 | 591 | 0.00E+00 | 1168.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64869.t1 | Q9C5G5 | 73.2 | 594 | 157 | 1 | 2 | 593 | 1 | 594 | 6.5e-268 | 924.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64869.t1 | G7K028 | 97.5 | 591 | 15 | 0 | 1 | 591 | 1 | 591 | 0.0e+00 | 1168.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene65314 | MS.gene64869 | PPI |
| MS.gene95619 | MS.gene64869 | PPI |
| MS.gene77366 | MS.gene64869 | PPI |
| MS.gene86566 | MS.gene64869 | PPI |
| MS.gene64869 | MS.gene77366 | PPI |
| MS.gene72638 | MS.gene64869 | PPI |
| MS.gene94679 | MS.gene64869 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64869.t1 | MTR_5g023960 | 97.462 | 591 | 15 | 0 | 1 | 591 | 1 | 591 | 0.0 | 1195 |
| MS.gene64869.t1 | MTR_5g023960 | 97.293 | 591 | 15 | 1 | 1 | 591 | 1 | 590 | 0.0 | 1188 |
| MS.gene64869.t1 | MTR_7g068890 | 44.178 | 584 | 306 | 8 | 10 | 590 | 14 | 580 | 3.15e-174 | 508 |
| MS.gene64869.t1 | MTR_4g124630 | 29.254 | 523 | 286 | 18 | 63 | 510 | 96 | 609 | 9.64e-44 | 168 |
| MS.gene64869.t1 | MTR_4g124630 | 29.254 | 523 | 286 | 18 | 63 | 510 | 96 | 609 | 1.11e-43 | 168 |
| MS.gene64869.t1 | MTR_4g124630 | 29.254 | 523 | 286 | 18 | 63 | 510 | 96 | 609 | 1.71e-43 | 167 |
| MS.gene64869.t1 | MTR_4g032925 | 26.157 | 432 | 268 | 14 | 63 | 469 | 113 | 518 | 1.65e-30 | 127 |
| MS.gene64869.t1 | MTR_4g032925 | 35.659 | 129 | 81 | 2 | 389 | 516 | 513 | 640 | 1.75e-14 | 77.4 |
| MS.gene64869.t1 | MTR_4g032925 | 26.157 | 432 | 268 | 14 | 63 | 469 | 113 | 518 | 1.88e-30 | 128 |
| MS.gene64869.t1 | MTR_4g032925 | 35.659 | 129 | 81 | 2 | 389 | 516 | 513 | 640 | 1.88e-14 | 77.4 |
| MS.gene64869.t1 | MTR_8g022740 | 29.373 | 303 | 193 | 8 | 63 | 348 | 58 | 356 | 1.21e-28 | 122 |
| MS.gene64869.t1 | MTR_8g022740 | 38.760 | 129 | 77 | 2 | 389 | 516 | 453 | 580 | 1.34e-14 | 77.8 |
| MS.gene64869.t1 | MTR_8g022740 | 29.373 | 303 | 193 | 8 | 63 | 348 | 102 | 400 | 1.36e-28 | 122 |
| MS.gene64869.t1 | MTR_8g022740 | 38.760 | 129 | 77 | 2 | 389 | 516 | 498 | 625 | 1.33e-14 | 77.8 |
| MS.gene64869.t1 | MTR_8g022740 | 31.004 | 229 | 137 | 8 | 137 | 348 | 4 | 228 | 1.34e-17 | 87.0 |
| MS.gene64869.t1 | MTR_8g022740 | 38.760 | 129 | 77 | 2 | 389 | 516 | 325 | 452 | 1.36e-14 | 77.4 |
| MS.gene64869.t1 | MTR_4g032935 | 35.659 | 129 | 81 | 2 | 389 | 516 | 288 | 415 | 1.93e-14 | 77.0 |
| MS.gene64869.t1 | MTR_4g032935 | 26.335 | 281 | 167 | 9 | 210 | 469 | 32 | 293 | 3.48e-14 | 76.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64869.t1 | AT3G51460 | 73.232 | 594 | 157 | 1 | 2 | 593 | 1 | 594 | 0.0 | 946 |
| MS.gene64869.t1 | AT5G66020 | 73.162 | 585 | 156 | 1 | 10 | 593 | 6 | 590 | 0.0 | 930 |
| MS.gene64869.t1 | AT3G51830 | 44.776 | 603 | 314 | 8 | 2 | 600 | 1 | 588 | 0.0 | 551 |
| MS.gene64869.t1 | AT3G51830 | 44.660 | 206 | 109 | 3 | 2 | 205 | 1 | 203 | 7.48e-53 | 181 |
| MS.gene64869.t1 | AT1G17340 | 28.431 | 510 | 301 | 16 | 63 | 516 | 90 | 591 | 1.78e-47 | 179 |
| MS.gene64869.t1 | AT3G14205 | 28.244 | 524 | 290 | 16 | 63 | 510 | 90 | 603 | 3.23e-43 | 166 |
| MS.gene64869.t1 | AT5G20840 | 28.327 | 526 | 286 | 18 | 62 | 510 | 92 | 603 | 2.62e-40 | 158 |
| MS.gene64869.t1 | AT1G22620 | 27.339 | 545 | 289 | 19 | 63 | 516 | 105 | 633 | 1.94e-39 | 155 |
| MS.gene64869.t1 | AT3G14205 | 29.398 | 415 | 212 | 14 | 172 | 510 | 19 | 428 | 1.10e-30 | 127 |
| MS.gene64869.t1 | AT3G43220 | 29.508 | 305 | 183 | 12 | 67 | 349 | 89 | 383 | 1.18e-24 | 109 |
| MS.gene64869.t1 | AT3G43220 | 38.583 | 127 | 68 | 3 | 389 | 510 | 477 | 598 | 1.26e-12 | 71.6 |
| MS.gene64869.t1 | AT3G43220 | 29.508 | 305 | 183 | 12 | 67 | 349 | 89 | 383 | 1.53e-24 | 109 |
| MS.gene64869.t1 | AT3G43220 | 38.583 | 127 | 68 | 3 | 389 | 510 | 477 | 598 | 1.15e-12 | 71.6 |
| MS.gene64869.t1 | AT3G43220 | 29.508 | 305 | 183 | 12 | 67 | 349 | 89 | 383 | 1.70e-24 | 109 |
| MS.gene64869.t1 | AT3G43220 | 38.583 | 127 | 68 | 3 | 389 | 510 | 477 | 598 | 1.20e-12 | 71.6 |
Find 130 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAGCTTCAAGGCCTCCTTTC+TGG | 0.134085 | 5.3:-13811088 | None:intergenic |
| TGTACACGCGTATGCGATTA+TGG | 0.159877 | 5.3:+13802816 | MS.gene64869:CDS |
| TAACTCAAACTTCGGTTTAT+AGG | 0.185031 | 5.3:-13808247 | None:intergenic |
| CAGTCATTTCCTTTGGCTTT+GGG | 0.188662 | 5.3:+13811723 | MS.gene64869:intron |
| AATTATTCAAATAATATCTT+TGG | 0.226950 | 5.3:-13810459 | None:intergenic |
| CTTAGAAGGCTTGGTGTCTT+TGG | 0.229696 | 5.3:+13809636 | MS.gene64869:CDS |
| TTGTTCTGTTTCCACAAAAT+TGG | 0.237624 | 5.3:-13806561 | None:intergenic |
| TGGATCTTCTGGTTCTTCTT+TGG | 0.251618 | 5.3:+13802874 | MS.gene64869:CDS |
| GCAGTCATTTCCTTTGGCTT+TGG | 0.269044 | 5.3:+13811722 | MS.gene64869:intron |
| GTTGGTATTCTAACATATTT+CGG | 0.288353 | 5.3:-13809614 | None:intergenic |
| AATCTAGATTGCTTCCTCTT+TGG | 0.290136 | 5.3:+13805068 | MS.gene64869:CDS |
| CATTACTTTCAAGCAGCTAT+TGG | 0.313357 | 5.3:+13805974 | MS.gene64869:CDS |
| GTATGCTGCTTCATTTGTTC+AGG | 0.317686 | 5.3:+13806601 | MS.gene64869:CDS |
| AAGATTTGAATGTGAACTAA+TGG | 0.325638 | 5.3:-13809670 | None:intergenic |
| TGGACTACAGGGAGTAAGTA+TGG | 0.328583 | 5.3:-13805788 | None:intergenic |
| TGTTGGGATATTGAGGCTTT+TGG | 0.330982 | 5.3:+13803120 | MS.gene64869:CDS |
| TTGGCTGTTAGTCGAGTTGA+TGG | 0.339009 | 5.3:+13802893 | MS.gene64869:CDS |
| GAGCCAACGGATGGATCTTC+TGG | 0.342851 | 5.3:+13802863 | MS.gene64869:CDS |
| ATTTCCTTTGGCTTTGGGTC+TGG | 0.342923 | 5.3:+13811728 | MS.gene64869:CDS |
| ACTCGAACAGTGGTGCATTC+TGG | 0.344734 | 5.3:-13803070 | None:intergenic |
| GATATAAGTATCCAGTATTC+AGG | 0.355105 | 5.3:+13809923 | MS.gene64869:CDS |
| AGGCAGAACCTCGATTTCTA+TGG | 0.358839 | 5.3:+13805628 | MS.gene64869:intron |
| AGCTTCAAGGCCTCCTTTCT+GGG | 0.366371 | 5.3:-13811087 | None:intergenic |
| ATGTTTGCAGTCATTTCCTT+TGG | 0.376308 | 5.3:+13811716 | MS.gene64869:intron |
| TGTTAGAATACCAACTTAGA+AGG | 0.376857 | 5.3:+13809622 | MS.gene64869:CDS |
| TGCCCAGCGGCTGAATGACC+TGG | 0.379171 | 5.3:+13805039 | MS.gene64869:CDS |
| CGCCCAGGTCATTCAGCCGC+TGG | 0.382656 | 5.3:-13805042 | None:intergenic |
| GAGCAGGAGTTCCTGAATAC+TGG | 0.390484 | 5.3:-13809934 | None:intergenic |
| ACTGCTGTTGAATGTGACTA+TGG | 0.393460 | 5.3:+13813275 | MS.gene64869:CDS |
| CAACTAACCGATGAGTTTCA+TGG | 0.397960 | 5.3:-13802918 | None:intergenic |
| TTTGGGCACCGCACCGTTCA+AGG | 0.413179 | 5.3:+13810409 | MS.gene64869:CDS |
| GCCCTTAGGATCATATTTGA+TGG | 0.414294 | 5.3:+13803749 | MS.gene64869:intron |
| GTATGCAGTTGCGTACTTCC+TGG | 0.414374 | 5.3:+13813239 | MS.gene64869:CDS |
| ATATCTTCTGTTGAATGAAA+AGG | 0.416622 | 5.3:+13809355 | MS.gene64869:CDS |
| TAAAAGTACCCCTGCCGAAC+AGG | 0.417048 | 5.3:+13803863 | MS.gene64869:CDS |
| TGAATGTGCTGGATCTTACC+TGG | 0.422927 | 5.3:+13803785 | MS.gene64869:CDS |
| ATTGCTTCCTCTTTGGAGAC+AGG | 0.424898 | 5.3:+13805075 | MS.gene64869:CDS |
| TGAGATGCAGCCACGAGTCC+TGG | 0.428050 | 5.3:+13808360 | MS.gene64869:intron |
| GGCAGGCATTAGTGTTGGTT+TGG | 0.430204 | 5.3:+13812634 | MS.gene64869:CDS |
| TACTCACAGCTATAGCTTCA+AGG | 0.434888 | 5.3:-13811100 | None:intergenic |
| ATACATGTGTAGAGCATGAT+AGG | 0.435367 | 5.3:+13809591 | MS.gene64869:intron |
| AGGAGCAACTTGGAGTTGTT+AGG | 0.436156 | 5.3:+13809390 | MS.gene64869:CDS |
| TTGATGTCACTTTGATTGCT+AGG | 0.436761 | 5.3:+13806008 | MS.gene64869:CDS |
| TATCTTCTGTTGAATGAAAA+GGG | 0.437236 | 5.3:+13809356 | MS.gene64869:CDS |
| AGCAAATATACCTGTTCGGC+AGG | 0.438913 | 5.3:-13803873 | None:intergenic |
| GTTGCGTACTTCCTGGTGTA+GGG | 0.447669 | 5.3:+13813246 | MS.gene64869:CDS |
| GAACAACTTATGCAGTTCAA+TGG | 0.449301 | 5.3:+13806578 | MS.gene64869:CDS |
| AGGATACTGCCTTGGACTAC+AGG | 0.453559 | 5.3:-13805800 | None:intergenic |
| GTGGTTCGATTCCTCTGCTC+TGG | 0.454149 | 5.3:+13808205 | MS.gene64869:CDS |
| GTACACGCGTATGCGATTAT+GGG | 0.456721 | 5.3:+13802817 | MS.gene64869:CDS |
| TTTCAAAATTTCATCCATGA+AGG | 0.458958 | 5.3:+13803818 | MS.gene64869:CDS |
| TAATCAGTGTGGGCTAATCA+TGG | 0.460966 | 5.3:+13809896 | MS.gene64869:intron |
| GAATACCAACTTAGAAGGCT+TGG | 0.465347 | 5.3:+13809627 | MS.gene64869:CDS |
| TTGGCAGAAGAAGGCGGAGT+TGG | 0.472243 | 5.3:+13803967 | MS.gene64869:intron |
| ATCAAATAAGGATACTGCCT+TGG | 0.476731 | 5.3:-13805808 | None:intergenic |
| GAACATGTCCACAGATATGA+TGG | 0.476890 | 5.3:-13808862 | None:intergenic |
| GGCTCAATCACATACTGATC+AGG | 0.477895 | 5.3:-13802845 | None:intergenic |
| AACAACTTATCAAAATGAAT+AGG | 0.479376 | 5.3:+13813195 | MS.gene64869:CDS |
| CTCTGAAAGGAGACTTTGTC+AGG | 0.482455 | 5.3:+13809954 | MS.gene64869:CDS |
| AACAACTTATGCAGTTCAAT+GGG | 0.484304 | 5.3:+13806579 | MS.gene64869:CDS |
| GAGAAAATGAAGGAGCAACT+TGG | 0.489109 | 5.3:+13809380 | MS.gene64869:CDS |
| AGTTTCAATAACTCAAACTT+CGG | 0.494399 | 5.3:-13808255 | None:intergenic |
| AAGGCCTCCTTTCTGGGAAG+AGG | 0.496085 | 5.3:-13811081 | None:intergenic |
| AGTTGCGTACTTCCTGGTGT+AGG | 0.507021 | 5.3:+13813245 | MS.gene64869:CDS |
| TAACCTGAGTTACATTTGTA+CGG | 0.511005 | 5.3:-13809436 | None:intergenic |
| ATAACTGAGCGTGAATGTGC+TGG | 0.512069 | 5.3:+13803774 | MS.gene64869:CDS |
| ACAAAGTCTCCTTTCAGAGC+AGG | 0.513920 | 5.3:-13809950 | None:intergenic |
| ATGTGGCTAGTGACGATGTA+AGG | 0.514590 | 5.3:+13808708 | MS.gene64869:CDS |
| GCCCAGGTCATTCAGCCGCT+GGG | 0.515132 | 5.3:-13805041 | None:intergenic |
| ATCATTTATTATCCCTTGAA+CGG | 0.519452 | 5.3:-13810422 | None:intergenic |
| AAATTGGCAACATATCCATC+TGG | 0.521128 | 5.3:-13806545 | None:intergenic |
| ATGTGGGCAGGCATTAGTGT+TGG | 0.524019 | 5.3:+13812629 | MS.gene64869:CDS |
| CTGTAGCAAATATACCTGTT+CGG | 0.524801 | 5.3:-13803877 | None:intergenic |
| AATCAGTGTGGGCTAATCAT+GGG | 0.525093 | 5.3:+13809897 | MS.gene64869:intron |
| AATGTTGCTGAGAAAACTAC+TGG | 0.525748 | 5.3:+13804007 | MS.gene64869:CDS |
| TTGGTGTTGTTGGGATATTG+AGG | 0.526621 | 5.3:+13803113 | MS.gene64869:CDS |
| AATCTAATATATGCCTCTCC+AGG | 0.534684 | 5.3:-13808378 | None:intergenic |
| AGACACCAAGCCTTCTAAGT+TGG | 0.543822 | 5.3:-13809632 | None:intergenic |
| TTTGATTTCCATCATATCTG+TGG | 0.545603 | 5.3:+13808854 | MS.gene64869:CDS |
| GGGAAGAGGCAGCTGTATCT+CGG | 0.547511 | 5.3:-13811067 | None:intergenic |
| GAATGTGCTGGATCTTACCT+GGG | 0.550082 | 5.3:+13803786 | MS.gene64869:CDS |
| TGAAAAGGGAGAGAAAATGA+AGG | 0.557341 | 5.3:+13809370 | MS.gene64869:CDS |
| ACAGCTGCCTCTTCCCAGAA+AGG | 0.559164 | 5.3:+13811074 | MS.gene64869:CDS |
| CAAATATACCTGTTCGGCAG+GGG | 0.559670 | 5.3:-13803871 | None:intergenic |
| AGGAGATGCACAAGAAGAAA+CGG | 0.565823 | 5.3:+13806028 | MS.gene64869:CDS |
| GCAAATATACCTGTTCGGCA+GGG | 0.569564 | 5.3:-13803872 | None:intergenic |
| GTGTCAAATGATACATTTGA+AGG | 0.569788 | 5.3:-13813339 | None:intergenic |
| AAAACCAGACCCAAAGCCAA+AGG | 0.570652 | 5.3:-13811732 | None:intergenic |
| ATCAGCATGGAGGTGAAGGA+CGG | 0.571732 | 5.3:+13808654 | MS.gene64869:intron |
| GGCTGTTGATCTTGTTAACA+AGG | 0.576603 | 5.3:+13808426 | MS.gene64869:CDS |
| AACTTATCAAAATGAATAGG+AGG | 0.579002 | 5.3:+13813198 | MS.gene64869:CDS |
| GTTCAAGGGATAATAAATGA+TGG | 0.579780 | 5.3:+13810424 | MS.gene64869:CDS |
| TTGGGCACCGCACCGTTCAA+GGG | 0.580521 | 5.3:+13810410 | MS.gene64869:CDS |
| TTGCGTACTTCCTGGTGTAG+GGG | 0.582654 | 5.3:+13813247 | MS.gene64869:CDS |
| GCCCAGCGGCTGAATGACCT+GGG | 0.583862 | 5.3:+13805040 | MS.gene64869:CDS |
| TACTTACTCCCTGTAGTCCA+AGG | 0.585221 | 5.3:+13805791 | MS.gene64869:CDS |
| GCAACCATGTCGTTGAGACA+AGG | 0.585817 | 5.3:+13811771 | MS.gene64869:CDS |
| TCAGGAACTCCTGCTCTGAA+AGG | 0.591042 | 5.3:+13809941 | MS.gene64869:CDS |
| GGACATTATATAGTTTCTGT+CGG | 0.591289 | 5.3:+13811044 | MS.gene64869:CDS |
| GCAATCTAGATTCATCGCCC+AGG | 0.594749 | 5.3:-13805057 | None:intergenic |
| TATGTGATTGAGCCAACGGA+TGG | 0.596228 | 5.3:+13802854 | MS.gene64869:CDS |
| GGAACTCGAATGTGGAGAAG+AGG | 0.596581 | 5.3:+13806515 | MS.gene64869:intron |
| AGAAGAGGAGCTGATCCAGA+TGG | 0.598685 | 5.3:+13806530 | MS.gene64869:CDS |
| GAACCAGAAGATCCATCCGT+TGG | 0.601871 | 5.3:-13802866 | None:intergenic |
| GTCTAGACAATCAATACAGT+TGG | 0.605671 | 5.3:-13809414 | None:intergenic |
| GGACTACAGGGAGTAAGTAT+GGG | 0.606764 | 5.3:-13805787 | None:intergenic |
| TTATCAAAATGAATAGGAGG+AGG | 0.607816 | 5.3:+13813201 | MS.gene64869:CDS |
| GATGGATCCATGAAACTCAT+CGG | 0.608786 | 5.3:+13802911 | MS.gene64869:CDS |
| ATATGCCTCTCCAGGACTCG+TGG | 0.612882 | 5.3:-13808370 | None:intergenic |
| GGATACTGCCTTGGACTACA+GGG | 0.615138 | 5.3:-13805799 | None:intergenic |
| AGAAGTGCTCATAGATAACA+AGG | 0.620907 | 5.3:+13805665 | MS.gene64869:CDS |
| AGACCGTACAAATGTAACTC+AGG | 0.622330 | 5.3:+13809433 | MS.gene64869:CDS |
| ATCAGTGTGGGCTAATCATG+GGG | 0.624829 | 5.3:+13809898 | MS.gene64869:intron |
| TGCAGCCACGAGTCCTGGAG+AGG | 0.625318 | 5.3:+13808365 | MS.gene64869:intron |
| GTTTGAGTTATTGAAACTCG+AGG | 0.628328 | 5.3:+13808260 | MS.gene64869:CDS |
| CTCACCTTGTCTCAACGACA+TGG | 0.630377 | 5.3:-13811775 | None:intergenic |
| AATCTTCGGAACTCGAACAG+TGG | 0.633576 | 5.3:-13803080 | None:intergenic |
| ACAATTTGCTGCCAGAGCAG+AGG | 0.638573 | 5.3:-13808216 | None:intergenic |
| CCTTGAAAGGAACTCGAATG+TGG | 0.638990 | 5.3:+13806507 | MS.gene64869:intron |
| TGGCAGTACAATGCAGCATG+TGG | 0.641511 | 5.3:+13808691 | MS.gene64869:CDS |
| TAATTGTTCCATAGAAATCG+AGG | 0.643849 | 5.3:-13805636 | None:intergenic |
| ATGAAACTAATTTAACTCTG+AGG | 0.647407 | 5.3:+13804044 | MS.gene64869:CDS |
| TCAGTATGTGATTGAGCCAA+CGG | 0.650515 | 5.3:+13802850 | MS.gene64869:CDS |
| GATGCAATTGATCTTCTGCA+AGG | 0.651722 | 5.3:+13811023 | MS.gene64869:CDS |
| CCATATTTGGCAGAAGAAGG+CGG | 0.653074 | 5.3:+13803961 | MS.gene64869:intron |
| ATAGATACCTGTCTCCAAAG+AGG | 0.664244 | 5.3:-13805082 | None:intergenic |
| TTATTATCCCTTGAACGGTG+CGG | 0.669092 | 5.3:-13810417 | None:intergenic |
| GCTGCCTCTTCCCAGAAAGG+AGG | 0.677836 | 5.3:+13811077 | MS.gene64869:CDS |
| GCAGTCGAATCCCCTACACC+AGG | 0.685387 | 5.3:-13813257 | None:intergenic |
| AATGTGCTGGATCTTACCTG+GGG | 0.707265 | 5.3:+13803787 | MS.gene64869:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 13802785 | 13813358 | 13802785 | ID=MS.gene64869 |
| chr5.3 | mRNA | 13802785 | 13813358 | 13802785 | ID=MS.gene64869.t1;Parent=MS.gene64869 |
| chr5.3 | exon | 13802785 | 13802932 | 13802785 | ID=MS.gene64869.t1.exon1;Parent=MS.gene64869.t1 |
| chr5.3 | CDS | 13802785 | 13802932 | 13802785 | ID=cds.MS.gene64869.t1;Parent=MS.gene64869.t1 |
| chr5.3 | exon | 13803062 | 13803145 | 13803062 | ID=MS.gene64869.t1.exon2;Parent=MS.gene64869.t1 |
| chr5.3 | CDS | 13803062 | 13803145 | 13803062 | ID=cds.MS.gene64869.t1;Parent=MS.gene64869.t1 |
| chr5.3 | exon | 13803757 | 13803884 | 13803757 | ID=MS.gene64869.t1.exon3;Parent=MS.gene64869.t1 |
| chr5.3 | CDS | 13803757 | 13803884 | 13803757 | ID=cds.MS.gene64869.t1;Parent=MS.gene64869.t1 |
| chr5.3 | exon | 13803974 | 13804065 | 13803974 | ID=MS.gene64869.t1.exon4;Parent=MS.gene64869.t1 |
| chr5.3 | CDS | 13803974 | 13804065 | 13803974 | ID=cds.MS.gene64869.t1;Parent=MS.gene64869.t1 |
| chr5.3 | exon | 13805039 | 13805096 | 13805039 | ID=MS.gene64869.t1.exon5;Parent=MS.gene64869.t1 |
| chr5.3 | CDS | 13805039 | 13805096 | 13805039 | ID=cds.MS.gene64869.t1;Parent=MS.gene64869.t1 |
| chr5.3 | exon | 13805630 | 13805686 | 13805630 | ID=MS.gene64869.t1.exon6;Parent=MS.gene64869.t1 |
| chr5.3 | CDS | 13805630 | 13805686 | 13805630 | ID=cds.MS.gene64869.t1;Parent=MS.gene64869.t1 |
| chr5.3 | exon | 13805782 | 13805815 | 13805782 | ID=MS.gene64869.t1.exon7;Parent=MS.gene64869.t1 |
| chr5.3 | CDS | 13805782 | 13805815 | 13805782 | ID=cds.MS.gene64869.t1;Parent=MS.gene64869.t1 |
| chr5.3 | exon | 13805969 | 13806049 | 13805969 | ID=MS.gene64869.t1.exon8;Parent=MS.gene64869.t1 |
| chr5.3 | CDS | 13805969 | 13806049 | 13805969 | ID=cds.MS.gene64869.t1;Parent=MS.gene64869.t1 |
| chr5.3 | exon | 13806516 | 13806622 | 13806516 | ID=MS.gene64869.t1.exon9;Parent=MS.gene64869.t1 |
| chr5.3 | CDS | 13806516 | 13806622 | 13806516 | ID=cds.MS.gene64869.t1;Parent=MS.gene64869.t1 |
| chr5.3 | exon | 13808201 | 13808287 | 13808201 | ID=MS.gene64869.t1.exon10;Parent=MS.gene64869.t1 |
| chr5.3 | CDS | 13808201 | 13808287 | 13808201 | ID=cds.MS.gene64869.t1;Parent=MS.gene64869.t1 |
| chr5.3 | exon | 13808370 | 13808447 | 13808370 | ID=MS.gene64869.t1.exon11;Parent=MS.gene64869.t1 |
| chr5.3 | CDS | 13808370 | 13808447 | 13808370 | ID=cds.MS.gene64869.t1;Parent=MS.gene64869.t1 |
| chr5.3 | exon | 13808659 | 13808729 | 13808659 | ID=MS.gene64869.t1.exon12;Parent=MS.gene64869.t1 |
| chr5.3 | CDS | 13808659 | 13808729 | 13808659 | ID=cds.MS.gene64869.t1;Parent=MS.gene64869.t1 |
| chr5.3 | exon | 13808844 | 13808942 | 13808844 | ID=MS.gene64869.t1.exon13;Parent=MS.gene64869.t1 |
| chr5.3 | CDS | 13808844 | 13808942 | 13808844 | ID=cds.MS.gene64869.t1;Parent=MS.gene64869.t1 |
| chr5.3 | exon | 13809355 | 13809454 | 13809355 | ID=MS.gene64869.t1.exon14;Parent=MS.gene64869.t1 |
| chr5.3 | CDS | 13809355 | 13809454 | 13809355 | ID=cds.MS.gene64869.t1;Parent=MS.gene64869.t1 |
| chr5.3 | exon | 13809603 | 13809711 | 13809603 | ID=MS.gene64869.t1.exon15;Parent=MS.gene64869.t1 |
| chr5.3 | CDS | 13809603 | 13809711 | 13809603 | ID=cds.MS.gene64869.t1;Parent=MS.gene64869.t1 |
| chr5.3 | exon | 13809903 | 13809975 | 13809903 | ID=MS.gene64869.t1.exon16;Parent=MS.gene64869.t1 |
| chr5.3 | CDS | 13809903 | 13809975 | 13809903 | ID=cds.MS.gene64869.t1;Parent=MS.gene64869.t1 |
| chr5.3 | exon | 13810408 | 13810501 | 13810408 | ID=MS.gene64869.t1.exon17;Parent=MS.gene64869.t1 |
| chr5.3 | CDS | 13810408 | 13810501 | 13810408 | ID=cds.MS.gene64869.t1;Parent=MS.gene64869.t1 |
| chr5.3 | exon | 13811023 | 13811115 | 13811023 | ID=MS.gene64869.t1.exon18;Parent=MS.gene64869.t1 |
| chr5.3 | CDS | 13811023 | 13811115 | 13811023 | ID=cds.MS.gene64869.t1;Parent=MS.gene64869.t1 |
| chr5.3 | exon | 13811726 | 13811792 | 13811726 | ID=MS.gene64869.t1.exon19;Parent=MS.gene64869.t1 |
| chr5.3 | CDS | 13811726 | 13811792 | 13811726 | ID=cds.MS.gene64869.t1;Parent=MS.gene64869.t1 |
| chr5.3 | exon | 13812594 | 13812664 | 13812594 | ID=MS.gene64869.t1.exon20;Parent=MS.gene64869.t1 |
| chr5.3 | CDS | 13812594 | 13812664 | 13812594 | ID=cds.MS.gene64869.t1;Parent=MS.gene64869.t1 |
| chr5.3 | exon | 13813185 | 13813358 | 13813185 | ID=MS.gene64869.t1.exon21;Parent=MS.gene64869.t1 |
| chr5.3 | CDS | 13813185 | 13813358 | 13813185 | ID=cds.MS.gene64869.t1;Parent=MS.gene64869.t1 |
| Gene Sequence |
| Protein sequence |
