AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene94679


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene94679.t1 MTR_7g068890 94.079 608 19 3 1 608 1 591 0.0 1177
MS.gene94679.t1 MTR_5g023960 45.167 600 302 7 14 604 10 591 0.0 545
MS.gene94679.t1 MTR_5g023960 45.500 600 299 8 14 604 10 590 0.0 542
MS.gene94679.t1 MTR_4g124630 25.830 542 308 18 65 533 97 617 1.94e-35 143
MS.gene94679.t1 MTR_4g124630 25.830 542 308 18 65 533 97 617 1.98e-35 142
MS.gene94679.t1 MTR_4g124630 25.830 542 308 18 65 533 97 617 2.38e-35 142
MS.gene94679.t1 MTR_8g022740 23.750 560 327 16 51 532 89 626 1.13e-30 128
MS.gene94679.t1 MTR_8g022740 23.077 559 331 18 51 532 45 581 1.64e-25 112
MS.gene94679.t1 MTR_4g032925 27.221 349 210 10 51 378 100 425 8.45e-25 109
MS.gene94679.t1 MTR_4g032925 30.534 131 89 2 404 533 513 642 1.81e-11 67.8
MS.gene94679.t1 MTR_4g032925 27.221 349 210 10 51 378 100 425 1.63e-24 109
MS.gene94679.t1 MTR_4g032925 30.534 131 89 2 404 533 513 642 2.17e-11 67.4
MS.gene94679.t1 MTR_8g022740 23.241 469 261 18 141 532 7 453 6.84e-16 81.6
MS.gene94679.t1 MTR_4g032935 32.927 164 92 5 233 378 37 200 8.65e-13 71.6
MS.gene94679.t1 MTR_4g032935 29.927 137 94 2 404 539 288 423 2.00e-11 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene94679.t1 AT3G51830 65.132 608 192 3 1 608 1 588 0.0 845
MS.gene94679.t1 AT3G51460 45.188 613 299 10 6 604 3 592 0.0 539
MS.gene94679.t1 AT5G66020 44.371 604 306 9 12 604 4 588 0.0 529
MS.gene94679.t1 AT3G51830 64.115 209 72 1 1 209 1 206 2.29e-92 284
MS.gene94679.t1 AT3G14205 27.717 552 297 18 65 539 91 617 3.82e-40 157
MS.gene94679.t1 AT1G17340 25.328 533 316 16 51 525 77 585 1.75e-37 149
MS.gene94679.t1 AT3G43220 24.490 539 313 16 68 533 89 606 2.49e-33 136
MS.gene94679.t1 AT3G43220 24.490 539 313 16 68 533 89 606 2.96e-33 136
MS.gene94679.t1 AT3G43220 24.490 539 313 16 68 533 89 606 3.99e-33 135
MS.gene94679.t1 AT5G20840 23.757 543 322 15 53 525 83 603 5.99e-32 132
MS.gene94679.t1 AT3G14205 27.273 440 225 16 176 539 22 442 1.18e-26 115
MS.gene94679.t1 AT1G22620 25.749 334 206 10 65 378 106 417 1.24e-21 100
MS.gene94679.t1 AT1G22620 30.657 137 93 2 404 539 506 641 6.46e-12 69.3

Find 126 sgRNAs with CRISPR-Local

Find 294 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTGAAGATTTAATGCTTTC+TGG 0.107883 7.3:-36356259 None:intergenic
CCGATACTACTTACAGTTAA+AGG 0.219294 7.3:-36356930 None:intergenic
GCATAGGCACACACACAAAA+AGG 0.226892 7.3:-36354238 None:intergenic
ACAAAGACATCTACGATTTA+TGG 0.241892 7.3:+36352775 MS.gene94679:CDS
AAATGACGCTCCACAATATT+TGG 0.246982 7.3:-36354968 None:intergenic
CTGTTCAGTTTCAATGAAAT+TGG 0.264335 7.3:-36354555 None:intergenic
GTCGCATCAGCTTTGATAAT+TGG 0.281742 7.3:+36357088 MS.gene94679:CDS
ACAATCTGCTCCCACAAAAT+AGG 0.284131 7.3:-36354789 None:intergenic
CCGCTGTTTGCAGTGTTATA+TGG 0.288849 7.3:+36356235 MS.gene94679:intron
AATCTCCTAATGAAGGGTTT+TGG 0.295846 7.3:+36352228 MS.gene94679:CDS
GGAAACATTAATTTACTTGA+TGG 0.341839 7.3:+36352266 MS.gene94679:CDS
TGATTTCCATTGCCACTGTC+GGG 0.348767 7.3:+36355862 MS.gene94679:CDS
CCCTCAAAGGGGACTTAGTT+AGG 0.358522 7.3:+36356489 MS.gene94679:CDS
TTGAAGATTTAATGCTTTCT+GGG 0.359939 7.3:-36356258 None:intergenic
TTAGCTTCAGCTCAGCTGTT+TGG 0.360161 7.3:-36354348 None:intergenic
CTAAACTGTCATTAATTTCA+AGG 0.371046 7.3:+36354383 MS.gene94679:CDS
TCAGCTATAAACCTCGCCTT+AGG 0.377862 7.3:+36354817 MS.gene94679:CDS
CATGATCTCTCACAAAGATA+TGG 0.378286 7.3:+36354992 MS.gene94679:CDS
AGAAGAAGCAAGTTTGTAGA+AGG 0.380035 7.3:+36353583 MS.gene94679:CDS
TTTGACACTGTTGAAAATAG+TGG 0.384611 7.3:+36353396 MS.gene94679:CDS
ACAAAGATATGGAGAGATAT+TGG 0.392630 7.3:+36355003 MS.gene94679:CDS
AGGAGATGTACACGGCGTTT+AGG 0.395297 7.3:+36354403 MS.gene94679:CDS
CATATCTTTGTGAGAGATCA+TGG 0.406032 7.3:-36354991 None:intergenic
ATGGCAATTGTCAAAGCTAA+TGG 0.408542 7.3:+36357309 MS.gene94679:CDS
ATGCCATTGTAATAACTTCT+CGG 0.409774 7.3:+36353157 MS.gene94679:CDS
GGAGGAGCTTATCGAGTATA+AGG 0.413778 7.3:+36354038 MS.gene94679:CDS
TCTACGATTTATGGTGTTGT+TGG 0.417433 7.3:+36352784 MS.gene94679:CDS
ACACATACTGCTGTGCATTT+CGG 0.417584 7.3:-36357251 None:intergenic
GTGTCTTCTGTACTGTGTGC+TGG 0.418409 7.3:+36357270 MS.gene94679:CDS
TTCATTCCTTTGTAGGTTCG+AGG 0.418417 7.3:+36354759 MS.gene94679:intron
GAGTAACATTTGTTCGATCA+AGG 0.423659 7.3:-36356141 None:intergenic
CTAATCCAAAACCCTTCATT+AGG 0.425238 7.3:-36352233 None:intergenic
TCAATGTTCGACGAGCAATA+TGG 0.425559 7.3:+36356320 MS.gene94679:CDS
ACCCTTCATTAGGAGATTGA+TGG 0.427837 7.3:-36352223 None:intergenic
AGGCTGACCCGCGATACGTT+TGG 0.431707 7.3:+36354001 MS.gene94679:intron
TTGATTTCCATTGCCACTGT+CGG 0.438049 7.3:+36355861 MS.gene94679:CDS
ATGTCTTATGCAGGATGCCT+TGG 0.439416 7.3:+36356839 MS.gene94679:intron
CTGGGACTAATGCCCTCAAA+GGG 0.441932 7.3:+36356477 MS.gene94679:CDS
ATCGACATCAAGCGATATAC+CGG 0.447308 7.3:-36353207 None:intergenic
TCCCATCAATCTCCTAATGA+AGG 0.448649 7.3:+36352221 MS.gene94679:CDS
CCCTTCATTAGGAGATTGAT+GGG 0.450841 7.3:-36352222 None:intergenic
CGTTTGGAACAAACATCTTA+CGG 0.451621 7.3:+36354017 MS.gene94679:CDS
AATCTTCAATTGCAGAGGGT+TGG 0.458977 7.3:+36356272 MS.gene94679:CDS
CTATCTGGATTAATTAAAGA+TGG 0.461277 7.3:+36356607 MS.gene94679:CDS
ATTATCAAAGCTGATGCGAC+AGG 0.462781 7.3:-36357085 None:intergenic
ATAACTTCCATGATGGGATT+CGG 0.462953 7.3:+36356659 MS.gene94679:CDS
AAGGAAGTTGGAAGTTTCCT+TGG 0.464170 7.3:+36353180 MS.gene94679:CDS
GGAACAATAAGATTGGTTGT+AGG 0.472131 7.3:+36352805 MS.gene94679:CDS
CAGCTATAAACCTCGCCTTA+GGG 0.477893 7.3:+36354818 MS.gene94679:CDS
ATAACTTCTCGGAAGGAAGT+TGG 0.482648 7.3:+36353168 MS.gene94679:CDS
TACTTGAATAACTTCCATGA+TGG 0.482768 7.3:+36356652 MS.gene94679:CDS
GAAAATAGTGGAGTCAATGC+CGG 0.486679 7.3:+36353408 MS.gene94679:CDS
AGAAGAGGAGCTAACTTTGA+AGG 0.487272 7.3:+36354524 MS.gene94679:CDS
AAAATAGTGGAGTCAATGCC+GGG 0.491746 7.3:+36353409 MS.gene94679:CDS
AGGATATTCCCTTGTACTAT+CGG 0.497695 7.3:-36354182 None:intergenic
CCTAACTAAGTCCCCTTTGA+GGG 0.497787 7.3:-36356489 None:intergenic
AAGGTTCAAAGCTACTTCGC+TGG 0.498114 7.3:-36356911 None:intergenic
TTCATCATGCCGATAGTACA+AGG 0.499850 7.3:+36354173 MS.gene94679:CDS
GCATCAGCTTTGATAATTGG+TGG 0.500750 7.3:+36357091 MS.gene94679:CDS
TGTTGTTGGAACAATAAGAT+TGG 0.501699 7.3:+36352798 MS.gene94679:CDS
ATGGAAGGCAGTTCTGTTCG+AGG 0.515558 7.3:+36357328 MS.gene94679:CDS
AAGTTGAAAACTTCAAAGCC+TGG 0.516357 7.3:-36353248 None:intergenic
ACTTGAATAACTTCCATGAT+GGG 0.517071 7.3:+36356653 MS.gene94679:CDS
CAGTGGCAATGGAAATCAAA+AGG 0.517893 7.3:-36355857 None:intergenic
TTGTTGCAGCACGGTGAAGA+AGG 0.519849 7.3:+36355651 MS.gene94679:intron
ACCTAACTAAGTCCCCTTTG+AGG 0.521814 7.3:-36356490 None:intergenic
GAGAGTACTTGCGTGTAACC+AGG 0.526307 7.3:+36353230 MS.gene94679:CDS
AACAGCTGAGCTGAAGCTAA+AGG 0.526367 7.3:+36354351 MS.gene94679:CDS
CTGTGTGCTGGAATAACTGC+TGG 0.531253 7.3:+36357282 MS.gene94679:CDS
GAGATAAGCCTTGAGTATGC+TGG 0.532566 7.3:+36356458 MS.gene94679:CDS
AGATAAGCCTTGAGTATGCT+GGG 0.536376 7.3:+36356459 MS.gene94679:CDS
TTGAGCCCCGACAGTGGCAA+TGG 0.536524 7.3:-36355868 None:intergenic
AGTAACATTTGTTCGATCAA+GGG 0.541779 7.3:-36356140 None:intergenic
TGGAATAACTGCTGGAGTGA+TGG 0.545879 7.3:+36357290 MS.gene94679:CDS
TGTTTGTTCCAAACGTATCG+CGG 0.547901 7.3:-36354009 None:intergenic
GAAGCAAGTTTGTAGAAGGG+TGG 0.549778 7.3:+36353587 MS.gene94679:CDS
GGAACAAGAATGTGGAGAAG+AGG 0.551271 7.3:+36354509 MS.gene94679:intron
GAGTAAGCCATTGTGGAAGC+AGG 0.552114 7.3:+36353612 MS.gene94679:CDS
TAAATCGTAGATGTCTTTGT+CGG 0.554158 7.3:-36352772 None:intergenic
CTTCCATGATGGGATTCGGC+AGG 0.554385 7.3:+36356663 MS.gene94679:CDS
TCCGTTTCAGCCAAATATTG+TGG 0.557833 7.3:+36354958 MS.gene94679:intron
CATTAAATCTTCAATTGCAG+AGG 0.558201 7.3:+36356267 MS.gene94679:CDS
ATTAAATCTTCAATTGCAGA+GGG 0.558421 7.3:+36356268 MS.gene94679:CDS
GTTTGTTCCAAACGTATCGC+GGG 0.563823 7.3:-36354008 None:intergenic
TATTTAGTGTGGGCAGAGCA+AGG 0.569577 7.3:+36356431 MS.gene94679:intron
TGATCGAACAAATGTTACTC+AGG 0.569718 7.3:+36356144 MS.gene94679:CDS
CTTCCGAGAAGTTATTACAA+TGG 0.579688 7.3:-36353160 None:intergenic
CCCATCAATCTCCTAATGAA+GGG 0.579901 7.3:+36352222 MS.gene94679:CDS
GCTGGGACTAATGCCCTCAA+AGG 0.581460 7.3:+36356476 MS.gene94679:CDS
TTGCCTGCCGAATCCCATCA+TGG 0.582463 7.3:-36356666 None:intergenic
TATCTGGATTAATTAAAGAT+GGG 0.582610 7.3:+36356608 MS.gene94679:CDS
GATTTCCATTGCCACTGTCG+GGG 0.583545 7.3:+36355863 MS.gene94679:CDS
CTTTCAGAAGAATCTGAAGT+GGG 0.586233 7.3:-36352140 None:intergenic
CTACTTCGCTGGAAGTGAGA+AGG 0.590353 7.3:-36356900 None:intergenic
TGTTCGAGGCCTCGTTTGTG+CGG 0.593814 7.3:+36357342 MS.gene94679:CDS
CATTGTAATAACTTCTCGGA+AGG 0.599202 7.3:+36353161 MS.gene94679:CDS
GAAGAAGCAAGTTTGTAGAA+GGG 0.601320 7.3:+36353584 MS.gene94679:CDS
GCTCATGACTGATAACCCTA+AGG 0.601793 7.3:-36354833 None:intergenic
CATTAGTCCCAGCATACTCA+AGG 0.604748 7.3:-36356466 None:intergenic
GGTGGATGAGTAAGCCATTG+TGG 0.606920 7.3:+36353605 MS.gene94679:CDS
AATACCTTGCTGAAGACTGA+AGG 0.608769 7.3:-36357128 None:intergenic
TCTTTCAGAAGAATCTGAAG+TGG 0.616968 7.3:-36352141 None:intergenic
TTAATCGTTTGCAGGTGACA+CGG 0.629676 7.3:+36352738 MS.gene94679:intron
CACATGAGACCGCACAAACG+AGG 0.630158 7.3:-36357351 None:intergenic
GATATACTAGAAGAGCAGAA+AGG 0.631014 7.3:+36356091 MS.gene94679:CDS
CGAAATTTGAGCCCCGACAG+TGG 0.632952 7.3:-36355874 None:intergenic
CAATTGTCAAAGCTAATGGA+AGG 0.634217 7.3:+36357313 MS.gene94679:CDS
CGTCTGAAATTTGATCGTAG+AGG 0.642019 7.3:-36355910 None:intergenic
GTCGAACATTGAAATGCACT+CGG 0.644361 7.3:-36356309 None:intergenic
TTATCAAAGCTGATGCGACA+GGG 0.647766 7.3:-36357084 None:intergenic
AATTAATGTTTCCATCAACA+CGG 0.649289 7.3:-36352256 None:intergenic
GTGACCGCTTATCAGATCCA+AGG 0.650631 7.3:-36356856 None:intergenic
TCATAAGAATAGTATAAACC+CGG 0.654946 7.3:-36353427 None:intergenic
GTGACACAGGAACAAGAATG+TGG 0.655013 7.3:+36354501 MS.gene94679:intron
TAATTTCAAGGAGATGTACA+CGG 0.664939 7.3:+36354395 MS.gene94679:CDS
GTACTAACCTGCTTCCACAA+TGG 0.673752 7.3:-36353619 None:intergenic
AGCGATATACCGGAAAACCA+AGG 0.694924 7.3:-36353197 None:intergenic
ACTACCTTCAGTCTTCAGCA+AGG 0.695354 7.3:+36357124 MS.gene94679:CDS
GATGCCTTGGATCTGATAAG+CGG 0.703536 7.3:+36356852 MS.gene94679:CDS
TACTTCATGATAGATAACAA+AGG 0.703872 7.3:+36356067 MS.gene94679:CDS
TCATCATGCCGATAGTACAA+GGG 0.704888 7.3:+36354174 MS.gene94679:CDS
TTGGAACAAACATCTTACGG+AGG 0.718484 7.3:+36354020 MS.gene94679:CDS
TCAAAGCTGATGCGACAGGG+AGG 0.719235 7.3:-36357081 None:intergenic
TGGGACTAATGCCCTCAAAG+GGG 0.731713 7.3:+36356478 MS.gene94679:CDS
TGACTGATAACCCTAAGGCG+AGG 0.732510 7.3:-36354828 None:intergenic
GAACATTGAAATGCACTCGG+AGG 0.740404 7.3:-36356306 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAAAACATAAAACAATAA+AGG - chr7.3:36355810-36355829 None:intergenic 10.0%
!! ATAAATCTGAAAAATAAATT+TGG - chr7.3:36355094-36355113 None:intergenic 10.0%
!! TAAATCTGAAAAATAAATTT+GGG - chr7.3:36355093-36355112 None:intergenic 10.0%
!!! TTAGTTATTGATATTATTTT+GGG + chr7.3:36352514-36352533 MS.gene94679:intron 10.0%
!! AAAAAAGTAGTTTAAATATC+AGG - chr7.3:36354205-36354224 None:intergenic 15.0%
!! AAAATATTGCTGAAAAATTT+AGG + chr7.3:36353956-36353975 MS.gene94679:intron 15.0%
!!! AATATTTTTTACTCTGATTA+AGG - chr7.3:36353944-36353963 None:intergenic 15.0%
!!! ATTACATTCATCTTTTAAAA+TGG + chr7.3:36356997-36357016 MS.gene94679:intron 15.0%
!!! GTTAGTTATTGATATTATTT+TGG + chr7.3:36352513-36352532 MS.gene94679:intron 15.0%
!!! TTTGTTGTTTATTTTATAGT+CGG + chr7.3:36357228-36357247 MS.gene94679:intron 15.0%
!!! TTTTATTTTTCTGTAGAAAA+AGG + chr7.3:36353360-36353379 MS.gene94679:intron 15.0%
!! AATAATAAACCAGCAATTTA+AGG - chr7.3:36353485-36353504 None:intergenic 20.0%
!! AATGAAAGTTAATTGAAAAG+TGG + chr7.3:36356804-36356823 MS.gene94679:intron 20.0%
!! ACAAAATCATTACACTAAAA+TGG - chr7.3:36352698-36352717 None:intergenic 20.0%
!! ATTGTGCATGAAAATAATAT+TGG - chr7.3:36353758-36353777 None:intergenic 20.0%
!! CTCAATATAATATGGAAATA+TGG + chr7.3:36354479-36354498 MS.gene94679:intron 20.0%
!! TACAGAAAAATAAAACACAA+AGG - chr7.3:36353355-36353374 None:intergenic 20.0%
!! TATCTGGATTAATTAAAGAT+GGG + chr7.3:36356608-36356627 MS.gene94679:CDS 20.0%
!! TCAATATAAAACTTAAACCT+AGG - chr7.3:36353691-36353710 None:intergenic 20.0%
!! TTTATCTAACTACCATTATA+AGG - chr7.3:36354449-36354468 None:intergenic 20.0%
!!! AAAATATTCATTGACTATCA+AGG - chr7.3:36354683-36354702 None:intergenic 20.0%
!!! CTTTTTTCCATTTATATTTC+AGG + chr7.3:36353981-36354000 MS.gene94679:intron 20.0%
!!! GTTCTTTTTCATTTTATGAT+TGG + chr7.3:36352345-36352364 MS.gene94679:intron 20.0%
!!! TACAAAGTGTTGTTAAATAA+TGG + chr7.3:36355430-36355449 MS.gene94679:intron 20.0%
!!! TTAACACCAATCTTTTTTTA+TGG + chr7.3:36354138-36354157 MS.gene94679:intron 20.0%
!!! TTCAAATATTTTTCCTTCAT+AGG + chr7.3:36355250-36355269 MS.gene94679:intron 20.0%
!!! TTTTCCATAAAACATGTTAA+TGG - chr7.3:36357045-36357064 None:intergenic 20.0%
!!! TTTTTCATTTTATGATTGGT+TGG + chr7.3:36352349-36352368 MS.gene94679:intron 20.0%
! AAAATGAGGATAAACTATCA+AGG - chr7.3:36354659-36354678 None:intergenic 25.0%
! AACACAATCATATATCCTAT+AGG - chr7.3:36355534-36355553 None:intergenic 25.0%
! AACTAAATGCATAAGAGAAA+TGG - chr7.3:36353876-36353895 None:intergenic 25.0%
! AATTAATGTTTCCATCAACA+CGG - chr7.3:36352259-36352278 None:intergenic 25.0%
! AGACAGTTGAAACAAAAAAT+TGG - chr7.3:36355584-36355603 None:intergenic 25.0%
! AGGACAATATTATCCATTAT+CGG - chr7.3:36356174-36356193 None:intergenic 25.0%
! ATAAAACTTAAACCTAGGAT+TGG - chr7.3:36353686-36353705 None:intergenic 25.0%
! ATAAACTATCAAGGAAATAC+TGG - chr7.3:36354650-36354669 None:intergenic 25.0%
! ATCACAAATCCAAAATTCAT+CGG - chr7.3:36356567-36356586 None:intergenic 25.0%
! ATGTTAATGGCACATTAAAA+TGG - chr7.3:36357032-36357051 None:intergenic 25.0%
! ATTAAATCTTCAATTGCAGA+GGG + chr7.3:36356268-36356287 MS.gene94679:CDS 25.0%
! ATTGAAGATTTAATGCTTTC+TGG - chr7.3:36356262-36356281 None:intergenic 25.0%
! CTAAACTGTCATTAATTTCA+AGG + chr7.3:36354383-36354402 MS.gene94679:CDS 25.0%
! CTATCTGGATTAATTAAAGA+TGG + chr7.3:36356607-36356626 MS.gene94679:CDS 25.0%
! GCATTTAAATATGCTGTTAA+GGG + chr7.3:36352913-36352932 MS.gene94679:intron 25.0%
! GGAAACATTAATTTACTTGA+TGG + chr7.3:36352266-36352285 MS.gene94679:CDS 25.0%
! TACTTCATGATAGATAACAA+AGG + chr7.3:36356067-36356086 MS.gene94679:CDS 25.0%
! TCATAAGAATAGTATAAACC+CGG - chr7.3:36353430-36353449 None:intergenic 25.0%
! TCATTTATGTATTCACTGAA+TGG - chr7.3:36356789-36356808 None:intergenic 25.0%
! TGAAGTTATCTATATTCAAG+TGG - chr7.3:36356978-36356997 None:intergenic 25.0%
! TGCAAAGATATGAATATCTA+GGG - chr7.3:36353516-36353535 None:intergenic 25.0%
! TGCAATAGCTCAATATAATA+TGG + chr7.3:36354471-36354490 MS.gene94679:intron 25.0%
! TGCATTTAAATATGCTGTTA+AGG + chr7.3:36352912-36352931 MS.gene94679:intron 25.0%
! TGTAATGCAGTAATATAAGA+TGG - chr7.3:36353828-36353847 None:intergenic 25.0%
! TTATTGAGTTCAAATAAGCA+GGG - chr7.3:36356408-36356427 None:intergenic 25.0%
! TTGAAGATTTAATGCTTTCT+GGG - chr7.3:36356261-36356280 None:intergenic 25.0%
! TTGCAAAGATATGAATATCT+AGG - chr7.3:36353517-36353536 None:intergenic 25.0%
!! ATGTAACAAACAGTAGTTTT+TGG - chr7.3:36352616-36352635 None:intergenic 25.0%
!! GTTATTTAAAATCCAATCCT+AGG + chr7.3:36353671-36353690 MS.gene94679:intron 25.0%
!! TTTTTGTATTAATCGTTTGC+AGG + chr7.3:36352730-36352749 MS.gene94679:intron 25.0%
!!! AAAAAAAGATTGGTGTTAAG+AGG - chr7.3:36354137-36354156 None:intergenic 25.0%
!!! AAAGAAGTTAACTTGCTAAA+TGG + chr7.3:36353022-36353041 MS.gene94679:intron 25.0%
!!! ACTGATTTTGGTTTTCTTTT+TGG + chr7.3:36355184-36355203 MS.gene94679:intron 25.0%
!!! ATTATTTTGGGAAAGAAAAC+AGG + chr7.3:36352526-36352545 MS.gene94679:intron 25.0%
!!! ATTTTATGATTGGTTGGAAA+TGG + chr7.3:36352355-36352374 MS.gene94679:intron 25.0%
!!! GTTTTTTCCATCTGAATAAA+GGG + chr7.3:36357160-36357179 MS.gene94679:intron 25.0%
!!! TGATCAAGTAAAACTGATTT+TGG + chr7.3:36355172-36355191 MS.gene94679:intron 25.0%
!!! TGTTTTTTCCATCTGAATAA+AGG + chr7.3:36357159-36357178 MS.gene94679:intron 25.0%
AAATTCATCGGTATCACAAA+AGG - chr7.3:36356555-36356574 None:intergenic 30.0%
AACTTGCATTATACTCGTTA+AGG + chr7.3:36353104-36353123 MS.gene94679:intron 30.0%
AAGAAGATGCTACATATCTT+TGG - chr7.3:36355124-36355143 None:intergenic 30.0%
AAGCTGCCATAAAAAAAGAT+TGG - chr7.3:36354147-36354166 None:intergenic 30.0%
AATCATATATCCTATAGGCA+GGG - chr7.3:36355529-36355548 None:intergenic 30.0%
ACAAAGACATCTACGATTTA+TGG + chr7.3:36352775-36352794 MS.gene94679:CDS 30.0%
ACAAAGATATGGAGAGATAT+TGG + chr7.3:36355003-36355022 MS.gene94679:CDS 30.0%
ACTCTAATTCATTCCTTTGT+AGG + chr7.3:36354752-36354771 MS.gene94679:intron 30.0%
ACTTGAATAACTTCCATGAT+GGG + chr7.3:36356653-36356672 MS.gene94679:CDS 30.0%
AGAAGAAGACTTTCCTTAAT+AGG - chr7.3:36352967-36352986 None:intergenic 30.0%
AGTAACATTTGTTCGATCAA+GGG - chr7.3:36356143-36356162 None:intergenic 30.0%
ATAAGTTTCATGTCTTATGC+AGG + chr7.3:36356830-36356849 MS.gene94679:intron 30.0%
ATGCCATTGTAATAACTTCT+CGG + chr7.3:36353157-36353176 MS.gene94679:CDS 30.0%
CATTAAATCTTCAATTGCAG+AGG + chr7.3:36356267-36356286 MS.gene94679:CDS 30.0%
CCTTTAACTGTAAGTAGTAT+CGG + chr7.3:36356930-36356949 MS.gene94679:intron 30.0%
CTGTTCAGTTTCAATGAAAT+TGG - chr7.3:36354558-36354577 None:intergenic 30.0%
GCAACAAAAGTAGAATTAAC+AGG - chr7.3:36355638-36355657 None:intergenic 30.0%
GGAAATACTGGAATTAAGTA+CGG - chr7.3:36354638-36354657 None:intergenic 30.0%
GTGAAGAAGATTAATTGAGA+AGG + chr7.3:36352436-36352455 MS.gene94679:intron 30.0%
GTGCATGAAAATAATATTGG+CGG - chr7.3:36353755-36353774 None:intergenic 30.0%
TAAATCGTAGATGTCTTTGT+CGG - chr7.3:36352775-36352794 None:intergenic 30.0%
TAATTTCAAGGAGATGTACA+CGG + chr7.3:36354395-36354414 MS.gene94679:CDS 30.0%
TACTTGAATAACTTCCATGA+TGG + chr7.3:36356652-36356671 MS.gene94679:CDS 30.0%
TAGACTATGTTGAATGCATT+TGG + chr7.3:36352991-36353010 MS.gene94679:intron 30.0%
TAGAGTACAAATCACAAACA+GGG - chr7.3:36354738-36354757 None:intergenic 30.0%
TATGGAAAAAAGACACTATC+TGG + chr7.3:36356592-36356611 MS.gene94679:CDS 30.0%
TCACTTAAATAAGCCTGTTA+TGG + chr7.3:36354300-36354319 MS.gene94679:intron 30.0%
TGGTAGACAATAGAGATATT+AGG - chr7.3:36356958-36356977 None:intergenic 30.0%
TGTTGTTGGAACAATAAGAT+TGG + chr7.3:36352798-36352817 MS.gene94679:CDS 30.0%
TTAGAGTACAAATCACAAAC+AGG - chr7.3:36354739-36354758 None:intergenic 30.0%
TTCGTCTTGTCTTTCATATT+AGG + chr7.3:36354098-36354117 MS.gene94679:intron 30.0%
TTGACTATCAAGGAAAAATG+AGG - chr7.3:36354673-36354692 None:intergenic 30.0%
TTGTTCTGTGATACACTATT+TGG + chr7.3:36355407-36355426 MS.gene94679:intron 30.0%
TTTGACACTGTTGAAAATAG+TGG + chr7.3:36353396-36353415 MS.gene94679:CDS 30.0%
! CTTCTATTTCTCAATTCTTC+TGG + chr7.3:36354866-36354885 MS.gene94679:intron 30.0%
! CTTCTTTCGTTTTCCTATTA+AGG + chr7.3:36352951-36352970 MS.gene94679:intron 30.0%
! GCAAGTTATATTGTTAGTCT+AGG - chr7.3:36353091-36353110 None:intergenic 30.0%
! TGATATTATGCAGAAAGCAT+AGG - chr7.3:36354257-36354276 None:intergenic 30.0%
! TTTGTGATACCGATGAATTT+TGG + chr7.3:36356555-36356574 MS.gene94679:intron 30.0%
! TTTTCCATATCCAATCTCTT+CGG + chr7.3:36355558-36355577 MS.gene94679:intron 30.0%
! TTTTCTGTAGAAAAAGGATG+AGG + chr7.3:36353366-36353385 MS.gene94679:intron 30.0%
!! ATTCAAGTTCTCATTTTTGC+AGG + chr7.3:36354595-36354614 MS.gene94679:CDS 30.0%
!! CAGACGATTTTGAAAAACAA+AGG + chr7.3:36355927-36355946 MS.gene94679:CDS 30.0%
!! GTTTGTTACATTCTGAAGTT+TGG + chr7.3:36352625-36352644 MS.gene94679:intron 30.0%
!! TGTGCCATTAACATGTTTTA+TGG + chr7.3:36357038-36357057 MS.gene94679:intron 30.0%
!!! CAACTGGGATTTTTTTTTGT+GGG + chr7.3:36352472-36352491 MS.gene94679:intron 30.0%
!!! GATTTTTTTTTGTGGGATCT+TGG + chr7.3:36352479-36352498 MS.gene94679:intron 30.0%
!!! TCAACTGGGATTTTTTTTTG+TGG + chr7.3:36352471-36352490 MS.gene94679:intron 30.0%
AAAAAATTGGCCGAAGAGAT+TGG - chr7.3:36355571-36355590 None:intergenic 35.0%
AAATGACGCTCCACAATATT+TGG - chr7.3:36354971-36354990 None:intergenic 35.0%
AAGTATGGAATTTGAGTCTG+TGG + chr7.3:36355301-36355320 MS.gene94679:intron 35.0%
AAGTTGAAAACTTCAAAGCC+TGG - chr7.3:36353251-36353270 None:intergenic 35.0%
AGAAGAAGCAAGTTTGTAGA+AGG + chr7.3:36353583-36353602 MS.gene94679:CDS 35.0%
AGGATATTCCCTTGTACTAT+CGG - chr7.3:36354185-36354204 None:intergenic 35.0%
AGTATGGAATTTGAGTCTGT+GGG + chr7.3:36355302-36355321 MS.gene94679:intron 35.0%
ATATGGAAATATGGTGACAC+AGG + chr7.3:36354488-36354507 MS.gene94679:intron 35.0%
ATGGCAATTGTCAAAGCTAA+TGG + chr7.3:36357309-36357328 MS.gene94679:CDS 35.0%
CAATCATATATCCTATAGGC+AGG - chr7.3:36355530-36355549 None:intergenic 35.0%
CAATGATGCTATCTTGATAC+AGG + chr7.3:36353129-36353148 MS.gene94679:intron 35.0%
CAATTGTCAAAGCTAATGGA+AGG + chr7.3:36357313-36357332 MS.gene94679:CDS 35.0%
CATATCTTTGTGAGAGATCA+TGG - chr7.3:36354994-36355013 None:intergenic 35.0%
CATGATCTCTCACAAAGATA+TGG + chr7.3:36354992-36355011 MS.gene94679:CDS 35.0%
CATTGTAATAACTTCTCGGA+AGG + chr7.3:36353161-36353180 MS.gene94679:CDS 35.0%
CCAAAGATGCTTCCTTATAA+TGG + chr7.3:36354434-36354453 MS.gene94679:intron 35.0%
CCGATACTACTTACAGTTAA+AGG - chr7.3:36356933-36356952 None:intergenic 35.0%
CTAATCCAAAACCCTTCATT+AGG - chr7.3:36352236-36352255 None:intergenic 35.0%
CTTCCGAGAAGTTATTACAA+TGG - chr7.3:36353163-36353182 None:intergenic 35.0%
GAAGAAGCAAGTTTGTAGAA+GGG + chr7.3:36353584-36353603 MS.gene94679:CDS 35.0%
GAATAGACAAGACCATAGAA+AGG + chr7.3:36353900-36353919 MS.gene94679:intron 35.0%
GAGTAACATTTGTTCGATCA+AGG - chr7.3:36356144-36356163 None:intergenic 35.0%
GATATACTAGAAGAGCAGAA+AGG + chr7.3:36356091-36356110 MS.gene94679:CDS 35.0%
GTAAGTTTGCAACACAAGAA+TGG - chr7.3:36355754-36355773 None:intergenic 35.0%
GTTTGATTGGCATGTTCTAT+AGG + chr7.3:36355333-36355352 MS.gene94679:intron 35.0%
TAGAACATGCCAATCAAACT+TGG - chr7.3:36355332-36355351 None:intergenic 35.0%
TCAAAGACCCTTTATTCAGA+TGG - chr7.3:36357170-36357189 None:intergenic 35.0%
TCAACTTCTCAAGAAGTAAG+AGG + chr7.3:36353264-36353283 MS.gene94679:intron 35.0%
TCCACAATATTTGGCTGAAA+CGG - chr7.3:36354962-36354981 None:intergenic 35.0%
TCTTTCAGAAGAATCTGAAG+TGG - chr7.3:36352144-36352163 None:intergenic 35.0%
TGATCGAACAAATGTTACTC+AGG + chr7.3:36356144-36356163 MS.gene94679:CDS 35.0%
TGTATCAGTCCTTAAATTGC+TGG + chr7.3:36353473-36353492 MS.gene94679:intron 35.0%
TTGCTACAATACAGATATGC+TGG + chr7.3:36355997-36356016 MS.gene94679:intron 35.0%
TTGGATTTGTGATGCAGATA+TGG + chr7.3:36356574-36356593 MS.gene94679:intron 35.0%
! AATCTCCTAATGAAGGGTTT+TGG + chr7.3:36352228-36352247 MS.gene94679:CDS 35.0%
! AGGTGAATTGTTTTCTCAAC+TGG + chr7.3:36352456-36352475 MS.gene94679:intron 35.0%
! AGGTTCGATTCCTATTTTGT+GGG + chr7.3:36354779-36354798 MS.gene94679:CDS 35.0%
! ATAACTTCCATGATGGGATT+CGG + chr7.3:36356659-36356678 MS.gene94679:CDS 35.0%
! CGTTTGGAACAAACATCTTA+CGG + chr7.3:36354017-36354036 MS.gene94679:CDS 35.0%
! CTTTCAGAAGAATCTGAAGT+GGG - chr7.3:36352143-36352162 None:intergenic 35.0%
! GCATCTTCTTGATGTTTTCT+AGG + chr7.3:36355134-36355153 MS.gene94679:intron 35.0%
! GGAACAATAAGATTGGTTGT+AGG + chr7.3:36352805-36352824 MS.gene94679:CDS 35.0%
! GGTGAATTGTTTTCTCAACT+GGG + chr7.3:36352457-36352476 MS.gene94679:intron 35.0%
! TCTTCTTGATGTTTTCTAGG+AGG + chr7.3:36355137-36355156 MS.gene94679:intron 35.0%
!! ATTCTACTTTTGTTGCAGCA+CGG + chr7.3:36355642-36355661 MS.gene94679:intron 35.0%
!! CCATTATAAGGAAGCATCTT+TGG - chr7.3:36354437-36354456 None:intergenic 35.0%
!! TAGGAAGTGTTGTCAAATAG+CGG + chr7.3:36355352-36355371 MS.gene94679:intron 35.0%
!! TCTACGATTTATGGTGTTGT+TGG + chr7.3:36352784-36352803 MS.gene94679:CDS 35.0%
!! TTTATTGACTCACGATGCTA+TGG + chr7.3:36355824-36355843 MS.gene94679:intron 35.0%
!!! TTTTTTTTGTGGGATCTTGG+TGG + chr7.3:36352482-36352501 MS.gene94679:intron 35.0%
AAACTTACGACCTTGTGCTA+TGG + chr7.3:36355766-36355785 MS.gene94679:intron 40.0%
AAATAGCGGCTATAGCATAG+AGG + chr7.3:36355366-36355385 MS.gene94679:intron 40.0%
AAGGAAGTTGGAAGTTTCCT+TGG + chr7.3:36353180-36353199 MS.gene94679:CDS 40.0%
AAGTTTGGTCTGTACTTGGT+TGG + chr7.3:36352640-36352659 MS.gene94679:intron 40.0%
AATACCTTGCTGAAGACTGA+AGG - chr7.3:36357131-36357150 None:intergenic 40.0%
AATCTTCAATTGCAGAGGGT+TGG + chr7.3:36356272-36356291 MS.gene94679:CDS 40.0%
ACAATCTGCTCCCACAAAAT+AGG - chr7.3:36354792-36354811 None:intergenic 40.0%
ACACATACTGCTGTGCATTT+CGG - chr7.3:36357254-36357273 None:intergenic 40.0%
ACCCTTCATTAGGAGATTGA+TGG - chr7.3:36352226-36352245 None:intergenic 40.0%
ACGTAGTGCCAAAAGTGAAA+GGG - chr7.3:36355278-36355297 None:intergenic 40.0%
AGAAGAGGAGCTAACTTTGA+AGG + chr7.3:36354524-36354543 MS.gene94679:CDS 40.0%
AGATAAGCCTTGAGTATGCT+GGG + chr7.3:36356459-36356478 MS.gene94679:CDS 40.0%
ATAACTTCTCGGAAGGAAGT+TGG + chr7.3:36353168-36353187 MS.gene94679:CDS 40.0%
ATAGGCACACACACAAAAAG+GGG - chr7.3:36354239-36354258 None:intergenic 40.0%
ATCGACATCAAGCGATATAC+CGG - chr7.3:36353210-36353229 None:intergenic 40.0%
ATTATCAAAGCTGATGCGAC+AGG - chr7.3:36357088-36357107 None:intergenic 40.0%
CAATATTTGGCTGAAACGGA+AGG - chr7.3:36354958-36354977 None:intergenic 40.0%
CAGTGGCAATGGAAATCAAA+AGG - chr7.3:36355860-36355879 None:intergenic 40.0%
CATAGGCACACACACAAAAA+GGG - chr7.3:36354240-36354259 None:intergenic 40.0%
CCATATAACACTGCAAACAG+CGG - chr7.3:36356238-36356257 None:intergenic 40.0%
CCCATCAATCTCCTAATGAA+GGG + chr7.3:36352222-36352241 MS.gene94679:CDS 40.0%
CCCTTCATTAGGAGATTGAT+GGG - chr7.3:36352225-36352244 None:intergenic 40.0%
CTGTTTGGAAGCTTAAGTCT+CGG - chr7.3:36354336-36354355 None:intergenic 40.0%
GAAGCTTAAGTCTCGGTTAA+GGG - chr7.3:36354329-36354348 None:intergenic 40.0%
GATAATATTGTCCTCCAGTC+TGG + chr7.3:36356180-36356199 MS.gene94679:intron 40.0%
GGGTCAGCCTGAAATATAAA+TGG - chr7.3:36353991-36354010 None:intergenic 40.0%
GTCGAACATTGAAATGCACT+CGG - chr7.3:36356312-36356331 None:intergenic 40.0%
TACTCTGATTAAGGTCAACC+AGG - chr7.3:36353935-36353954 None:intergenic 40.0%
TCAATGTTCGACGAGCAATA+TGG + chr7.3:36356320-36356339 MS.gene94679:CDS 40.0%
TCATCATGCCGATAGTACAA+GGG + chr7.3:36354174-36354193 MS.gene94679:CDS 40.0%
TCCCATCAATCTCCTAATGA+AGG + chr7.3:36352221-36352240 MS.gene94679:CDS 40.0%
TCCGTTTCAGCCAAATATTG+TGG + chr7.3:36354958-36354977 MS.gene94679:intron 40.0%
TGAAAAATCAGCAAAGTGCG+AGG + chr7.3:36355703-36355722 MS.gene94679:CDS 40.0%
TGTTTGTTCCAAACGTATCG+CGG - chr7.3:36354012-36354031 None:intergenic 40.0%
TTAATCGTTTGCAGGTGACA+CGG + chr7.3:36352738-36352757 MS.gene94679:intron 40.0%
TTATCAAAGCTGATGCGACA+GGG - chr7.3:36357087-36357106 None:intergenic 40.0%
TTCATCATGCCGATAGTACA+AGG + chr7.3:36354173-36354192 MS.gene94679:CDS 40.0%
TTCATTCCTTTGTAGGTTCG+AGG + chr7.3:36354759-36354778 MS.gene94679:intron 40.0%
TTGATTTCCATTGCCACTGT+CGG + chr7.3:36355861-36355880 MS.gene94679:CDS 40.0%
TTGCTGAGTAAATTCCAGAC+TGG - chr7.3:36356197-36356216 None:intergenic 40.0%
TTGGAACAAACATCTTACGG+AGG + chr7.3:36354020-36354039 MS.gene94679:CDS 40.0%
TTGGCACTACGTGTTAAGTA+TGG + chr7.3:36355286-36355305 MS.gene94679:intron 40.0%
! AAAATAGTGGAGTCAATGCC+GGG + chr7.3:36353409-36353428 MS.gene94679:CDS 40.0%
! CGTCTGAAATTTGATCGTAG+AGG - chr7.3:36355913-36355932 None:intergenic 40.0%
! GAAAATAGTGGAGTCAATGC+CGG + chr7.3:36353408-36353427 MS.gene94679:CDS 40.0%
! GAGGTTCGATTCCTATTTTG+TGG + chr7.3:36354778-36354797 MS.gene94679:CDS 40.0%
! GCATCAGCTTTGATAATTGG+TGG + chr7.3:36357091-36357110 MS.gene94679:CDS 40.0%
! GTCGCATCAGCTTTGATAAT+TGG + chr7.3:36357088-36357107 MS.gene94679:CDS 40.0%
! TCTGAAGTTTGGTCTGTACT+TGG + chr7.3:36352636-36352655 MS.gene94679:intron 40.0%
!! TGGAAGTTTCCTTGGTTTTC+CGG + chr7.3:36353188-36353207 MS.gene94679:CDS 40.0%
!!! TTTTGGATTAGCCGTGTTGA+TGG + chr7.3:36352245-36352264 MS.gene94679:CDS 40.0%
AAAGCAGACTCCATAGCACA+AGG - chr7.3:36355779-36355798 None:intergenic 45.0%
AACAGCTGAGCTGAAGCTAA+AGG + chr7.3:36354351-36354370 MS.gene94679:CDS 45.0%
AAGGTTCAAAGCTACTTCGC+TGG - chr7.3:36356914-36356933 None:intergenic 45.0%
AAGTGAAAGGGAGCCTATGA+AGG - chr7.3:36355266-36355285 None:intergenic 45.0%
ACCTAACTAAGTCCCCTTTG+AGG - chr7.3:36356493-36356512 None:intergenic 45.0%
ACTACCTTCAGTCTTCAGCA+AGG + chr7.3:36357124-36357143 MS.gene94679:CDS 45.0%
AGCGATATACCGGAAAACCA+AGG - chr7.3:36353200-36353219 None:intergenic 45.0%
AGGTTCAAGAGGCCTTTCTA+TGG - chr7.3:36353915-36353934 None:intergenic 45.0%
ATAGAAAGGCCTCTTGAACC+TGG + chr7.3:36353914-36353933 MS.gene94679:intron 45.0%
ATCGAACCTCGAACCTACAA+AGG - chr7.3:36354768-36354787 None:intergenic 45.0%
ATGTCTTATGCAGGATGCCT+TGG + chr7.3:36356839-36356858 MS.gene94679:intron 45.0%
CAATTGACAACCCTGCCTAT+AGG + chr7.3:36355516-36355535 MS.gene94679:intron 45.0%
CACGTAGTGCCAAAAGTGAA+AGG - chr7.3:36355279-36355298 None:intergenic 45.0%
CAGCTATAAACCTCGCCTTA+GGG + chr7.3:36354818-36354837 MS.gene94679:CDS 45.0%
CATTAGTCCCAGCATACTCA+AGG - chr7.3:36356469-36356488 None:intergenic 45.0%
CCGCTGTTTGCAGTGTTATA+TGG + chr7.3:36356235-36356254 MS.gene94679:intron 45.0%
CCTAACTAAGTCCCCTTTGA+GGG - chr7.3:36356492-36356511 None:intergenic 45.0%
CGGTTAAGGGAAACCATAAC+AGG - chr7.3:36354316-36354335 None:intergenic 45.0%
CTGAAACGGAAGGAGTAGAA+GGG - chr7.3:36354948-36354967 None:intergenic 45.0%
CTGAGTAAATTCCAGACTGG+AGG - chr7.3:36356194-36356213 None:intergenic 45.0%
GAACATTGAAATGCACTCGG+AGG - chr7.3:36356309-36356328 None:intergenic 45.0%
GAAGCAAGTTTGTAGAAGGG+TGG + chr7.3:36353587-36353606 MS.gene94679:CDS 45.0%
GAGATAAGCCTTGAGTATGC+TGG + chr7.3:36356458-36356477 MS.gene94679:CDS 45.0%
GATGCCTTGGATCTGATAAG+CGG + chr7.3:36356852-36356871 MS.gene94679:CDS 45.0%
GCATAGGCACACACACAAAA+AGG - chr7.3:36354241-36354260 None:intergenic 45.0%
GCTCATGACTGATAACCCTA+AGG - chr7.3:36354836-36354855 None:intergenic 45.0%
GGAACAAGAATGTGGAGAAG+AGG + chr7.3:36354509-36354528 MS.gene94679:intron 45.0%
GGAAGCTTAAGTCTCGGTTA+AGG - chr7.3:36354330-36354349 None:intergenic 45.0%
GGAGGAGCTTATCGAGTATA+AGG + chr7.3:36354038-36354057 MS.gene94679:CDS 45.0%
GTACTAACCTGCTTCCACAA+TGG - chr7.3:36353622-36353641 None:intergenic 45.0%
GTGACACAGGAACAAGAATG+TGG + chr7.3:36354501-36354520 MS.gene94679:intron 45.0%
GTTTGTTCCAAACGTATCGC+GGG - chr7.3:36354011-36354030 None:intergenic 45.0%
TAAGGTCAACCAGGTTCAAG+AGG - chr7.3:36353926-36353945 None:intergenic 45.0%
TATTTAGTGTGGGCAGAGCA+AGG + chr7.3:36356431-36356450 MS.gene94679:intron 45.0%
TCAGCTATAAACCTCGCCTT+AGG + chr7.3:36354817-36354836 MS.gene94679:CDS 45.0%
TGAAACGGAAGGAGTAGAAG+GGG - chr7.3:36354947-36354966 None:intergenic 45.0%
TGATTTCCATTGCCACTGTC+GGG + chr7.3:36355862-36355881 MS.gene94679:CDS 45.0%
TGGAATAACTGCTGGAGTGA+TGG + chr7.3:36357290-36357309 MS.gene94679:CDS 45.0%
TGGAATTTGAGTCTGTGGGT+TGG + chr7.3:36355306-36355325 MS.gene94679:intron 45.0%
TTACTCAGGTTCGCCGATAA+TGG + chr7.3:36356158-36356177 MS.gene94679:intron 45.0%
TTAGCTTCAGCTCAGCTGTT+TGG - chr7.3:36354351-36354370 None:intergenic 45.0%
TTGGCCGAAGAGATTGGATA+TGG - chr7.3:36355565-36355584 None:intergenic 45.0%
! CATAGGCTCCCTTTCACTTT+TGG + chr7.3:36355267-36355286 MS.gene94679:intron 45.0%
ACAAACAGCTCGCTGCGTTA+GGG + chr7.3:36355209-36355228 MS.gene94679:intron 50.0%
ACACACACAAAAAGGGGACG+GGG - chr7.3:36354233-36354252 None:intergenic 50.0%
AGGAGATGTACACGGCGTTT+AGG + chr7.3:36354403-36354422 MS.gene94679:CDS 50.0%
AGGGTTGTCAATTGCAGGTG+CGG - chr7.3:36355510-36355529 None:intergenic 50.0%
ATGGAAGGCAGTTCTGTTCG+AGG + chr7.3:36357328-36357347 MS.gene94679:CDS 50.0%
CACACACACAAAAAGGGGAC+GGG - chr7.3:36354234-36354253 None:intergenic 50.0%
CCCTCAAAGGGGACTTAGTT+AGG + chr7.3:36356489-36356508 MS.gene94679:CDS 50.0%
CTACTTCGCTGGAAGTGAGA+AGG - chr7.3:36356903-36356922 None:intergenic 50.0%
CTGGGACTAATGCCCTCAAA+GGG + chr7.3:36356477-36356496 MS.gene94679:CDS 50.0%
CTGTGTGCTGGAATAACTGC+TGG + chr7.3:36357282-36357301 MS.gene94679:CDS 50.0%
CTTGCTTCTTCTCTGCAAGC+TGG - chr7.3:36353575-36353594 None:intergenic 50.0%
GAGTAAGCCATTGTGGAAGC+AGG + chr7.3:36353612-36353631 MS.gene94679:CDS 50.0%
GATTTCCATTGCCACTGTCG+GGG + chr7.3:36355863-36355882 MS.gene94679:CDS 50.0%
GCACACACACAAAAAGGGGA+CGG - chr7.3:36354235-36354254 None:intergenic 50.0%
GCTGAAACGGAAGGAGTAGA+AGG - chr7.3:36354949-36354968 None:intergenic 50.0%
GGTGGATGAGTAAGCCATTG+TGG + chr7.3:36353605-36353624 MS.gene94679:CDS 50.0%
GTGACCGCTTATCAGATCCA+AGG - chr7.3:36356859-36356878 None:intergenic 50.0%
GTGTCTTCTGTACTGTGTGC+TGG + chr7.3:36357270-36357289 MS.gene94679:CDS 50.0%
TAGGCAGGGTTGTCAATTGC+AGG - chr7.3:36355515-36355534 None:intergenic 50.0%
TGACTGATAACCCTAAGGCG+AGG - chr7.3:36354831-36354850 None:intergenic 50.0%
TGGGACTAATGCCCTCAAAG+GGG + chr7.3:36356478-36356497 MS.gene94679:CDS 50.0%
TTGTTGCAGCACGGTGAAGA+AGG + chr7.3:36355651-36355670 MS.gene94679:intron 50.0%
!! GAGAGTACTTGCGTGTAACC+AGG + chr7.3:36353230-36353249 MS.gene94679:CDS 50.0%
!! GTGGGTTGGCCAAGTTTGAT+TGG + chr7.3:36355320-36355339 MS.gene94679:intron 50.0%
CACAAACAGCTCGCTGCGTT+AGG + chr7.3:36355208-36355227 MS.gene94679:intron 55.0%
CACACACAAAAAGGGGACGG+GGG - chr7.3:36354232-36354251 None:intergenic 55.0%
CACATGAGACCGCACAAACG+AGG - chr7.3:36357354-36357373 None:intergenic 55.0%
CGAAATTTGAGCCCCGACAG+TGG - chr7.3:36355877-36355896 None:intergenic 55.0%
CTAACGCAGCGAGCTGTTTG+TGG - chr7.3:36355210-36355229 None:intergenic 55.0%
GCTGGGACTAATGCCCTCAA+AGG + chr7.3:36356476-36356495 MS.gene94679:CDS 55.0%
TCAAAGCTGATGCGACAGGG+AGG - chr7.3:36357084-36357103 None:intergenic 55.0%
TGTTCGAGGCCTCGTTTGTG+CGG + chr7.3:36357342-36357361 MS.gene94679:CDS 55.0%
TTGCCTGCCGAATCCCATCA+TGG - chr7.3:36356669-36356688 None:intergenic 55.0%
! CTTCCATGATGGGATTCGGC+AGG + chr7.3:36356663-36356682 MS.gene94679:CDS 55.0%
AGGCTGACCCGCGATACGTT+TGG + chr7.3:36354001-36354020 MS.gene94679:intron 60.0%
TTGAGCCCCGACAGTGGCAA+TGG - chr7.3:36355871-36355890 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr7.3 gene 36352128 36357374 36352128 ID=MS.gene94679
chr7.3 mRNA 36352128 36357374 36352128 ID=MS.gene94679.t1;Parent=MS.gene94679
chr7.3 exon 36352128 36352287 36352128 ID=MS.gene94679.t1.exon1;Parent=MS.gene94679.t1
chr7.3 CDS 36352128 36352287 36352128 ID=cds.MS.gene94679.t1;Parent=MS.gene94679.t1
chr7.3 exon 36352752 36352826 36352752 ID=MS.gene94679.t1.exon2;Parent=MS.gene94679.t1
chr7.3 CDS 36352752 36352826 36352752 ID=cds.MS.gene94679.t1;Parent=MS.gene94679.t1
chr7.3 exon 36353151 36353278 36353151 ID=MS.gene94679.t1.exon3;Parent=MS.gene94679.t1
chr7.3 CDS 36353151 36353278 36353151 ID=cds.MS.gene94679.t1;Parent=MS.gene94679.t1
chr7.3 exon 36353376 36353467 36353376 ID=MS.gene94679.t1.exon4;Parent=MS.gene94679.t1
chr7.3 CDS 36353376 36353467 36353376 ID=cds.MS.gene94679.t1;Parent=MS.gene94679.t1
chr7.3 exon 36353576 36353633 36353576 ID=MS.gene94679.t1.exon5;Parent=MS.gene94679.t1
chr7.3 CDS 36353576 36353633 36353576 ID=cds.MS.gene94679.t1;Parent=MS.gene94679.t1
chr7.3 exon 36354003 36354059 36354003 ID=MS.gene94679.t1.exon6;Parent=MS.gene94679.t1
chr7.3 CDS 36354003 36354059 36354003 ID=cds.MS.gene94679.t1;Parent=MS.gene94679.t1
chr7.3 exon 36354164 36354246 36354164 ID=MS.gene94679.t1.exon7;Parent=MS.gene94679.t1
chr7.3 CDS 36354164 36354246 36354164 ID=cds.MS.gene94679.t1;Parent=MS.gene94679.t1
chr7.3 exon 36354345 36354424 36354345 ID=MS.gene94679.t1.exon8;Parent=MS.gene94679.t1
chr7.3 CDS 36354345 36354424 36354345 ID=cds.MS.gene94679.t1;Parent=MS.gene94679.t1
chr7.3 exon 36354510 36354616 36354510 ID=MS.gene94679.t1.exon9;Parent=MS.gene94679.t1
chr7.3 CDS 36354510 36354616 36354510 ID=cds.MS.gene94679.t1;Parent=MS.gene94679.t1
chr7.3 exon 36354774 36354860 36354774 ID=MS.gene94679.t1.exon10;Parent=MS.gene94679.t1
chr7.3 CDS 36354774 36354860 36354774 ID=cds.MS.gene94679.t1;Parent=MS.gene94679.t1
chr7.3 exon 36354968 36355045 36354968 ID=MS.gene94679.t1.exon11;Parent=MS.gene94679.t1
chr7.3 CDS 36354968 36355045 36354968 ID=cds.MS.gene94679.t1;Parent=MS.gene94679.t1
chr7.3 exon 36355660 36355724 36355660 ID=MS.gene94679.t1.exon12;Parent=MS.gene94679.t1
chr7.3 CDS 36355660 36355724 36355660 ID=cds.MS.gene94679.t1;Parent=MS.gene94679.t1
chr7.3 exon 36355850 36355948 36355850 ID=MS.gene94679.t1.exon13;Parent=MS.gene94679.t1
chr7.3 CDS 36355850 36355948 36355850 ID=cds.MS.gene94679.t1;Parent=MS.gene94679.t1
chr7.3 exon 36356066 36356165 36356066 ID=MS.gene94679.t1.exon14;Parent=MS.gene94679.t1
chr7.3 CDS 36356066 36356165 36356066 ID=cds.MS.gene94679.t1;Parent=MS.gene94679.t1
chr7.3 exon 36356248 36356356 36356248 ID=MS.gene94679.t1.exon15;Parent=MS.gene94679.t1
chr7.3 CDS 36356248 36356356 36356248 ID=cds.MS.gene94679.t1;Parent=MS.gene94679.t1
chr7.3 exon 36356438 36356510 36356438 ID=MS.gene94679.t1.exon16;Parent=MS.gene94679.t1
chr7.3 CDS 36356438 36356510 36356438 ID=cds.MS.gene94679.t1;Parent=MS.gene94679.t1
chr7.3 exon 36356591 36356684 36356591 ID=MS.gene94679.t1.exon17;Parent=MS.gene94679.t1
chr7.3 CDS 36356591 36356684 36356591 ID=cds.MS.gene94679.t1;Parent=MS.gene94679.t1
chr7.3 exon 36356852 36356938 36356852 ID=MS.gene94679.t1.exon18;Parent=MS.gene94679.t1
chr7.3 CDS 36356852 36356938 36356852 ID=cds.MS.gene94679.t1;Parent=MS.gene94679.t1
chr7.3 exon 36357079 36357145 36357079 ID=MS.gene94679.t1.exon19;Parent=MS.gene94679.t1
chr7.3 CDS 36357079 36357145 36357079 ID=cds.MS.gene94679.t1;Parent=MS.gene94679.t1
chr7.3 exon 36357247 36357374 36357247 ID=MS.gene94679.t1.exon20;Parent=MS.gene94679.t1
chr7.3 CDS 36357247 36357374 36357247 ID=cds.MS.gene94679.t1;Parent=MS.gene94679.t1
Gene Sequence

>MS.gene94679

ATGGACATTGAACCCACTTCAGATTCTTCTGAAAGATTCAAGCTTTATGATGAGCTTGAATTGCATGAATTTCAAGACAAATTTGTTATCAAATCCCATCAATCTCCTAATGAAGGGTTTTGGATTAGCCGTGTTGATGGAAACATTAATTTACTTGATGGTAATCTTCTTTTTATTTATTTATTTATTTATTTATTTATTTATTTGTTGAATTTTAGTTCTTTTTCATTTTATGATTGGTTGGAAATGGAAAGAAGATTAATTTTAGTTTTTTGTGAAGTTTGTAGCTTTATTATTGTTATTGTTATGTGAAGAAGATTAATTGAGAAGGTGAATTGTTTTCTCAACTGGGATTTTTTTTTGTGGGATCTTGGTGGTAGTTTTAGTTAGTTATTGATATTATTTTGGGAAAGAAAACAGGATCATGAGTTTTTGTTACATATTGACTTTCTGCATTTGCACATTTAAGAATGAAGTTGTTATAGCCAAAAACTACTGTTTGTTACATTCTGAAGTTTGGTCTGTACTTGGTTGGTTTGCACTTATTTAGTAACATACTTGAAATGACCATTTTAGTGTAATGATTTTGTTTTATGTTTTGTTTTTTGTATTAATCGTTTGCAGGTGACACGGTCTCAGAAAGTCCGACAAAGACATCTACGATTTATGGTGTTGTTGGAACAATAAGATTGGTTGTAGGTAGATAAGCTTATAATCTTTTCTTGAGTTGATTTTACTTGTATTTGCATATGCATTTGTTTTCATATTTACTTATTCATATGTTTGCATTTAAATATGCTGTTAAGGGAAACAATGCTATTAACTTCTTTCGTTTTCCTATTAAGGAAAGTCTTCTTCTGAAGTAGACTATGTTGAATGCATTTGGTTTAGCAGAAAGAAGTTAACTTGCTAAATGGATTTAGATGAACAAAAAGAAATCTTTATACTCTCTAGTAACTACCTAGACTAACAATATAACTTGCATTATACTCGTTAAGGTTCAATGATGCTATCTTGATACAGGAACTTATGCCATTGTAATAACTTCTCGGAAGGAAGTTGGAAGTTTCCTTGGTTTTCCGGTATATCGCTTGATGTCGATGAGAGTACTTGCGTGTAACCAGGCTTTGAAGTTTTCAACTTCTCAAGAAGTAAGAGGTTATATAATTATAAGTTACTGAGTTATCAATCAAGTGTTATATGTATGATTCATGCTCAATAAGTCCTTTGTGTTTTATTTTTCTGTAGAAAAAGGATGAGGCGTACTTTTTGACACTGTTGAAAATAGTGGAGTCAATGCCGGGTTTATACTATTCTTATGAAACAGATATTACATTAAAGTGAGTGTATCAGTCCTTAAATTGCTGGTTTATTATTATCTTATACCCTAGATATTCATATCTTTGCAAGATTGATGTTCATGAGATGTAATTCGTCTTGTCGACCAGCTTGCAGAGAAGAAGCAAGTTTGTAGAAGGGTGGATGAGTAAGCCATTGTGGAAGCAGGTTAGTACACATAATGCTCATTCTTTTTAGAATAACTGTTATTTAAAATCCAATCCTAGGTTTAAGTTTTATATTGAAATTTACTTCTTGATATCTTTATTGAGAGCAAAGCATTCTGCCGCCAATATTATTTTCATGCACAATTTAGTAGTTTTGTATGTTATCGCAAAAATTTCTTGCATATCTTTTTTCCATCTTATATTACTGCATTACAATGTGTCGCAATAATCATATTCAGACCATTTCTCTTATGCATTTAGTTCTTAGAATAGACAAGACCATAGAAAGGCCTCTTGAACCTGGTTGACCTTAATCAGAGTAAAAAATATTGCTGAAAAATTTAGGTGCTTTTTTCCATTTATATTTCAGGCTGACCCGCGATACGTTTGGAACAAACATCTTACGGAGGAGCTTATCGAGTATAAGGTCAGACAATTTTGCAAAGAAGTCTTCTAAGTTTTAACTTCGTCTTGTCTTTCATATTAGGATATTAAAGTTGTCCTCTTAACACCAATCTTTTTTTATGGCAGCTTGACAGATTCATCATGCCGATAGTACAAGGGAATATCCTGATATTTAAACTACTTTTTTCTCTCCCCCGTCCCCTTTTTGTGTGTGTGCCTATGCTTTCTGCATAATATCATTACAAGAAAATGAAGTATGCATTCACTTAAATAAGCCTGTTATGGTTTCCCTTAACCGAGACTTAAGCTTCCAAACAGCTGAGCTGAAGCTAAAGGACTCATGTGCTAAACTGTCATTAATTTCAAGGAGATGTACACGGCGTTTAGGTACAGTGTCCAAAGATGCTTCCTTATAATGGTAGTTAGATAAATTTGCAATAGCTCAATATAATATGGAAATATGGTGACACAGGAACAAGAATGTGGAGAAGAGGAGCTAACTTTGAAGGTGACTCTGCCAATTTCATTGAAACTGAACAGTTGCTTGAAGTTGAAGAATTCAAGTTCTCATTTTTGCAGGTATTATTTTACACTAATCCGTACTTAATTCCAGTATTTCCTTGATAGTTTATCCTCATTTTTCCTTGATAGTCAATGAATATTTTATATTTTATCTTACAATATCAATTTTTGAGCTCCCTGTTTGTGATTTGTACTCTAATTCATTCCTTTGTAGGTTCGAGGTTCGATTCCTATTTTGTGGGAGCAGATTGTTGATCTCAGCTATAAACCTCGCCTTAGGGTTATCAGTCATGAGCAAACAGTACACTTCTATTTCTCAATTCTTCTGGTTCTTTAAAGCTTTTGACATAATTTAGATTTATACATGTTTCTTATTGCTTTTATCCCCTTCTACTCCTTCCGTTTCAGCCAAATATTGTGGAGCGTCATTTCCATGATCTCTCACAAAGATATGGAGAGATATTGGCAGTTGATCTAACTGACAAAGTAAGACATCTATCTACTCTCTTTCGACGCTAATATGATTCTGTCCCAAATTTATTTTTCAGATTTATAGCGAGTCCAAAGATATGTAGCATCTTCTTGATGTTTTCTAGGAGGCAAAGATATTCATGATCAAGTAAAACTGATTTTGGTTTTCTTTTTGGCCACAAACAGCTCGCTGCGTTAGGGACTTTTTCATAATATCTATTCAAATATTTTTCCTTCATAGGCTCCCTTTCACTTTTGGCACTACGTGTTAAGTATGGAATTTGAGTCTGTGGGTTGGCCAAGTTTGATTGGCATGTTCTATAGGAAGTGTTGTCAAATAGCGGCTATAGCATAGAGGAATTTGAACAAATTTTTATTGTTCTGTGATACACTATTTGGTACAAAGTGTTGTTAAATAATGGAAATAGCAGCGCTATAGCACTTTAGCGTAGTTGAATTTAACAAACTACTATTTTCCGCACCTGCAATTGACAACCCTGCCTATAGGATATATGATTGTGTTAATTTTTTCCATATCCAATCTCTTCGGCCAATTTTTTGTTTCAACTGTCTCTTACTTTGTGTATACTGTTTTGATTGATTTCCTGTTAATTCTACTTTTGTTGCAGCACGGTGAAGAAGGTAAATTAAGTGCAGCATATGCTGCTGAAATGAAAAATCAGCAAAGTGCGAGGTGATCATTTAGACTTTTTTCTTATACCATTCTTGTGTTGCAAACTTACGACCTTGTGCTATGGAGTCTGCTTTATTTTGTACCTTTATTGTTTTATGTTTTATTGACTCACGATGCTATGGCAGATATGTACCTTTTGATTTCCATTGCCACTGTCGGGGCTCAAATTTCGATGATTTAAAAATCCTCTACGATCAAATTTCAGACGATTTTGAAAAACAAAGGTATTGAAAAAAAAAATCAAGTATTTTATATACAAATATAATAGCTAGTTGCTACAATACAGATATGCTGGCAATCTATGATTCAGACTTTTAATCACTACTGTTTCAGCTGAGCAGATACTTCATGATAGATAACAAAGGCGATATACTAGAAGAGCAGAAAGGAATTATCAGATCAAACTGCATTGATTCCCTTGATCGAACAAATGTTACTCAGGTTCGCCGATAATGGATAATATTGTCCTCCAGTCTGGAATTTACTCAGCAACTTACTTTGATTATCATGCCGCTGTTTGCAGTGTTATATGGCCCAGAAAGCATTAAATCTTCAATTGCAGAGGGTTGGAGTGCTTACTTCCTCCGAGTGCATTTCAATGTTCGACGAGCAATATGGAAAATTTAGAATATGTATGAAATTTCTTGATAATTTCTATTGCTCTTCTTTACGAATTATAACCCTGCTTATTTGAACTCAATAATTTTATTTAGTGTGGGCAGAGCAAGGTGATGAGATAAGCCTTGAGTATGCTGGGACTAATGCCCTCAAAGGGGACTTAGTTAGGTATGAAAAATTTTGATAACGAATCATCTGTTTTTATGTTTCCTTTTGTGATACCGATGAATTTTGGATTTGTGATGCAGATATGGAAAAAAGACACTATCTGGATTAATTAAAGATGGGATGAGTGCACTTTCGCGCTATTACTTGAATAACTTCCATGATGGGATTCGGCAGGCAAGTTCATATTTATGTTAATCGTTCTTTGAGCTGTGTTATTTTGACTCACAAATTTGACGTCAAAATTCGACAACAATTTAGATTGTTAACACAGTTAACCATTCAGTGAATACATAAATGAAAGTTAATTGAAAAGTGGTTAATAAGTTTCATGTCTTATGCAGGATGCCTTGGATCTGATAAGCGGTCACTATACTGTCAGTAGAAACATTCCTTCTCACTTCCAGCGAAGTAGCTTTGAACCTTTAACTGTAAGTAGTATCGGATCCTAATATCTCTATTGTCTACCACTTGAATATAGATAACTTCATTACATTCATCTTTTAAAATGGAGAATGAAACCATTTTAATGTGCCATTAACATGTTTTATGGAAAACTGTAAACATGCAGTACCTCCCTGTCGCATCAGCTTTGATAATTGGTGGTTTGACAGTAACTACCTTCAGTCTTCAGCAAGGTATTTAATTATGTGTTTTTTCCATCTGAATAAAGGGTCTTTGATGCTTACTTTGCTTTTCTTTTTATTTTATTTTAAAAAATTTGTTGTTTATTTTATAGTCGGCCGAAATGCACAGCAGTATGTGTCTTCTGTACTGTGTGCTGGAATAACTGCTGGAGTGATGGCAATTGTCAAAGCTAATGGAAGGCAGTTCTGTTCGAGGCCTCGTTTGTGCGGTCTCATGTGA

Protein sequence

>MS.gene94679.t1

MDIEPTSDSSERFKLYDELELHEFQDKFVIKSHQSPNEGFWISRVDGNINLLDGDTVSESPTKTSTIYGVVGTIRLVVGTYAIVITSRKEVGSFLGFPVYRLMSMRVLACNQALKFSTSQEKKDEAYFLTLLKIVESMPGLYYSYETDITLNLQRRSKFVEGWMSKPLWKQADPRYVWNKHLTEELIEYKLDRFIMPIVQGNILIFKLLFSLPRPLFVFQTAELKLKDSCAKLSLISRRCTRRLGTRMWRRGANFEGDSANFIETEQLLEVEEFKFSFLQVRGSIPILWEQIVDLSYKPRLRVISHEQTPNIVERHFHDLSQRYGEILAVDLTDKHGEEGKLSAAYAAEMKNQQSARYVPFDFHCHCRGSNFDDLKILYDQISDDFEKQRYFMIDNKGDILEEQKGIIRSNCIDSLDRTNVTQCYMAQKALNLQLQRVGVLTSSECISMFDEQYGKFRILWAEQGDEISLEYAGTNALKGDLVRYGKKTLSGLIKDGMSALSRYYLNNFHDGIRQDALDLISGHYTVSRNIPSHFQRSSFEPLTYLPVASALIIGGLTVTTFSLQQVGRNAQQYVSSVLCAGITAGVMAIVKANGRQFCSRPRLCGLM