Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86566.t1 | XP_003612337.2 | 97.6 | 591 | 14 | 0 | 1 | 591 | 1 | 591 | 0.00E+00 | 1170.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86566.t1 | Q9C5G5 | 73.4 | 594 | 156 | 1 | 2 | 593 | 1 | 594 | 1.7e-268 | 926.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86566.t1 | G7K028 | 97.6 | 591 | 14 | 0 | 1 | 591 | 1 | 591 | 0.0e+00 | 1170.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene72638 | MS.gene86566 | PPI |
| MS.gene94679 | MS.gene86566 | PPI |
| MS.gene86566 | MS.gene64869 | PPI |
| MS.gene86566 | MS.gene77366 | PPI |
| MS.gene65314 | MS.gene86566 | PPI |
| MS.gene86566 | MS.gene94679 | PPI |
| MS.gene95619 | MS.gene86566 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86566.t1 | MTR_5g023960 | 97.631 | 591 | 14 | 0 | 1 | 591 | 1 | 591 | 0.0 | 1196 |
| MS.gene86566.t1 | MTR_5g023960 | 97.462 | 591 | 14 | 1 | 1 | 591 | 1 | 590 | 0.0 | 1190 |
| MS.gene86566.t1 | MTR_7g068890 | 44.178 | 584 | 306 | 8 | 10 | 590 | 14 | 580 | 3.19e-174 | 508 |
| MS.gene86566.t1 | MTR_4g124630 | 29.254 | 523 | 286 | 18 | 63 | 510 | 96 | 609 | 1.08e-43 | 168 |
| MS.gene86566.t1 | MTR_4g124630 | 29.254 | 523 | 286 | 18 | 63 | 510 | 96 | 609 | 1.53e-43 | 167 |
| MS.gene86566.t1 | MTR_4g124630 | 29.254 | 523 | 286 | 18 | 63 | 510 | 96 | 609 | 1.81e-43 | 167 |
| MS.gene86566.t1 | MTR_4g032925 | 26.157 | 432 | 268 | 14 | 63 | 469 | 113 | 518 | 1.54e-30 | 127 |
| MS.gene86566.t1 | MTR_4g032925 | 35.659 | 129 | 81 | 2 | 389 | 516 | 513 | 640 | 1.59e-14 | 77.4 |
| MS.gene86566.t1 | MTR_4g032925 | 26.157 | 432 | 268 | 14 | 63 | 469 | 113 | 518 | 1.72e-30 | 128 |
| MS.gene86566.t1 | MTR_4g032925 | 35.659 | 129 | 81 | 2 | 389 | 516 | 513 | 640 | 1.90e-14 | 77.4 |
| MS.gene86566.t1 | MTR_8g022740 | 29.373 | 303 | 193 | 8 | 63 | 348 | 58 | 356 | 1.10e-28 | 122 |
| MS.gene86566.t1 | MTR_8g022740 | 38.760 | 129 | 77 | 2 | 389 | 516 | 453 | 580 | 1.31e-14 | 77.8 |
| MS.gene86566.t1 | MTR_8g022740 | 29.373 | 303 | 193 | 8 | 63 | 348 | 102 | 400 | 1.24e-28 | 122 |
| MS.gene86566.t1 | MTR_8g022740 | 38.760 | 129 | 77 | 2 | 389 | 516 | 498 | 625 | 1.28e-14 | 77.8 |
| MS.gene86566.t1 | MTR_8g022740 | 31.004 | 229 | 137 | 8 | 137 | 348 | 4 | 228 | 1.28e-17 | 87.0 |
| MS.gene86566.t1 | MTR_8g022740 | 38.760 | 129 | 77 | 2 | 389 | 516 | 325 | 452 | 1.36e-14 | 77.4 |
| MS.gene86566.t1 | MTR_4g032935 | 35.659 | 129 | 81 | 2 | 389 | 516 | 288 | 415 | 1.87e-14 | 77.4 |
| MS.gene86566.t1 | MTR_4g032935 | 26.335 | 281 | 167 | 9 | 210 | 469 | 32 | 293 | 2.93e-14 | 76.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86566.t1 | AT3G51460 | 73.401 | 594 | 156 | 1 | 2 | 593 | 1 | 594 | 0.0 | 947 |
| MS.gene86566.t1 | AT5G66020 | 73.333 | 585 | 155 | 1 | 10 | 593 | 6 | 590 | 0.0 | 932 |
| MS.gene86566.t1 | AT3G51830 | 44.776 | 603 | 314 | 8 | 2 | 600 | 1 | 588 | 0.0 | 551 |
| MS.gene86566.t1 | AT3G51830 | 44.660 | 206 | 109 | 3 | 2 | 205 | 1 | 203 | 7.10e-53 | 181 |
| MS.gene86566.t1 | AT1G17340 | 28.235 | 510 | 302 | 16 | 63 | 516 | 90 | 591 | 4.87e-47 | 177 |
| MS.gene86566.t1 | AT3G14205 | 28.244 | 524 | 290 | 16 | 63 | 510 | 90 | 603 | 2.66e-43 | 167 |
| MS.gene86566.t1 | AT5G20840 | 28.327 | 526 | 286 | 18 | 62 | 510 | 92 | 603 | 2.64e-40 | 158 |
| MS.gene86566.t1 | AT1G22620 | 27.339 | 545 | 289 | 19 | 63 | 516 | 105 | 633 | 1.95e-39 | 155 |
| MS.gene86566.t1 | AT3G14205 | 29.398 | 415 | 212 | 14 | 172 | 510 | 19 | 428 | 9.61e-31 | 128 |
| MS.gene86566.t1 | AT3G43220 | 29.508 | 305 | 183 | 12 | 67 | 349 | 89 | 383 | 1.06e-24 | 109 |
| MS.gene86566.t1 | AT3G43220 | 38.583 | 127 | 68 | 3 | 389 | 510 | 477 | 598 | 1.18e-12 | 71.6 |
| MS.gene86566.t1 | AT3G43220 | 29.508 | 305 | 183 | 12 | 67 | 349 | 89 | 383 | 1.43e-24 | 109 |
| MS.gene86566.t1 | AT3G43220 | 38.583 | 127 | 68 | 3 | 389 | 510 | 477 | 598 | 1.12e-12 | 71.6 |
| MS.gene86566.t1 | AT3G43220 | 29.508 | 305 | 183 | 12 | 67 | 349 | 89 | 383 | 1.47e-24 | 109 |
| MS.gene86566.t1 | AT3G43220 | 38.583 | 127 | 68 | 3 | 389 | 510 | 477 | 598 | 1.17e-12 | 71.6 |
Find 130 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAGCTTCAAGGCCTCCTTTC+TGG | 0.134085 | 5.1:-14621930 | None:intergenic |
| TGTACACGCGTATGCGATTA+TGG | 0.159877 | 5.1:+14613599 | MS.gene86566:CDS |
| TAACTCAAACTTCGGTTTAT+AGG | 0.185031 | 5.1:-14619029 | None:intergenic |
| CAGTCATTTCCTTTGGCTTT+GGG | 0.188662 | 5.1:+14622565 | MS.gene86566:intron |
| AATTATTCAAATAATATCTT+TGG | 0.226950 | 5.1:-14621301 | None:intergenic |
| CTTAGAAGGCTTGGTGTCTT+TGG | 0.229696 | 5.1:+14620418 | MS.gene86566:CDS |
| TTGTTCTGTTTCCACAAAAT+TGG | 0.237624 | 5.1:-14617345 | None:intergenic |
| TGGATCTTCTGGTTCTTCTT+TGG | 0.251618 | 5.1:+14613657 | MS.gene86566:CDS |
| GCAGTCATTTCCTTTGGCTT+TGG | 0.269044 | 5.1:+14622564 | MS.gene86566:intron |
| GTTGGTATTCTAACATATTT+CGG | 0.288353 | 5.1:-14620396 | None:intergenic |
| AATCTAGATTGCTTCCTCTT+TGG | 0.290136 | 5.1:+14615852 | MS.gene86566:CDS |
| GTATACTGCTTCATTTGTTC+AGG | 0.310161 | 5.1:+14617385 | MS.gene86566:CDS |
| CATTACTTTCAAGCAGCTAT+TGG | 0.313357 | 5.1:+14616758 | MS.gene86566:CDS |
| AAGATTTGAATGTGAACTAA+TGG | 0.325638 | 5.1:-14620452 | None:intergenic |
| TGGACTACAGGGAGTAAGTA+TGG | 0.328583 | 5.1:-14616572 | None:intergenic |
| TGTTGGGATATTGAGGCTTT+TGG | 0.330982 | 5.1:+14613904 | MS.gene86566:CDS |
| TTGGCTGTTAGTCGAGTTGA+TGG | 0.339009 | 5.1:+14613676 | MS.gene86566:CDS |
| GAGCCAACGGATGGATCTTC+TGG | 0.342851 | 5.1:+14613646 | MS.gene86566:CDS |
| ATTTCCTTTGGCTTTGGGTC+TGG | 0.342923 | 5.1:+14622570 | MS.gene86566:CDS |
| ACTCGAACAGTGGTGCATTC+TGG | 0.344734 | 5.1:-14613854 | None:intergenic |
| GATATAAGTATCCAGTATTC+AGG | 0.355105 | 5.1:+14620765 | MS.gene86566:CDS |
| AGGCAGAACCTCGATTTCTA+TGG | 0.358839 | 5.1:+14616412 | MS.gene86566:intron |
| AGCTTCAAGGCCTCCTTTCT+GGG | 0.366371 | 5.1:-14621929 | None:intergenic |
| ATGTTTGCAGTCATTTCCTT+TGG | 0.376308 | 5.1:+14622558 | MS.gene86566:intron |
| TGTTAGAATACCAACTTAGA+AGG | 0.376857 | 5.1:+14620404 | MS.gene86566:CDS |
| TGCCCAGCGGCTGAATGACC+TGG | 0.379171 | 5.1:+14615823 | MS.gene86566:CDS |
| CGCCCAGGTCATTCAGCCGC+TGG | 0.382656 | 5.1:-14615826 | None:intergenic |
| GAGCAGGAGTTCCTGAATAC+TGG | 0.390484 | 5.1:-14620776 | None:intergenic |
| ACTGCTGTTGAATGTGACTA+TGG | 0.393460 | 5.1:+14624119 | MS.gene86566:CDS |
| CAACTAACCGATGAGTTTCA+TGG | 0.397960 | 5.1:-14613701 | None:intergenic |
| TTTGGGCACCGCACCGTTCA+AGG | 0.413179 | 5.1:+14621251 | MS.gene86566:CDS |
| GCCCTTAGGATCATATTTGA+TGG | 0.414294 | 5.1:+14614533 | MS.gene86566:intron |
| GTATGCAGTTGCGTACTTCC+TGG | 0.414374 | 5.1:+14624083 | MS.gene86566:CDS |
| ATATCTTCTGTTGAATGAAA+AGG | 0.416622 | 5.1:+14620137 | MS.gene86566:CDS |
| TAAAAGTACCCCTGCCGAAC+AGG | 0.417048 | 5.1:+14614647 | MS.gene86566:CDS |
| TGAATGTGCTGGATCTTACC+TGG | 0.422927 | 5.1:+14614569 | MS.gene86566:CDS |
| ATTGCTTCCTCTTTGGAGAC+AGG | 0.424898 | 5.1:+14615859 | MS.gene86566:CDS |
| TGAGATGCAGCCACGAGTCC+TGG | 0.428050 | 5.1:+14619142 | MS.gene86566:intron |
| GGCAGGCATTAGTGTTGGTT+TGG | 0.430204 | 5.1:+14623478 | MS.gene86566:CDS |
| TACTCACAGCTATAGCTTCA+AGG | 0.434888 | 5.1:-14621942 | None:intergenic |
| ATACATGTGTAGAGCATGAT+AGG | 0.435367 | 5.1:+14620373 | MS.gene86566:intron |
| AGGAGCAACTTGGAGTTGTT+AGG | 0.436156 | 5.1:+14620172 | MS.gene86566:CDS |
| TTGATGTCACTTTGATTGCT+AGG | 0.436761 | 5.1:+14616792 | MS.gene86566:CDS |
| TATCTTCTGTTGAATGAAAA+GGG | 0.437236 | 5.1:+14620138 | MS.gene86566:CDS |
| AGCAAATATACCTGTTCGGC+AGG | 0.438913 | 5.1:-14614657 | None:intergenic |
| GTTGCGTACTTCCTGGTGTA+GGG | 0.447669 | 5.1:+14624090 | MS.gene86566:CDS |
| GAACAACTTATGCAGTTCAA+TGG | 0.449301 | 5.1:+14617362 | MS.gene86566:CDS |
| AGGATACTGCCTTGGACTAC+AGG | 0.453559 | 5.1:-14616584 | None:intergenic |
| GTGGTTCGATTCCTCTGCTC+TGG | 0.454149 | 5.1:+14618987 | MS.gene86566:CDS |
| GTACACGCGTATGCGATTAT+GGG | 0.456721 | 5.1:+14613600 | MS.gene86566:CDS |
| TTTCAAAATTTCATCCATGA+AGG | 0.458958 | 5.1:+14614602 | MS.gene86566:CDS |
| TAATCAGTGTGGGCTAATCA+TGG | 0.460966 | 5.1:+14620738 | MS.gene86566:intron |
| GAATACCAACTTAGAAGGCT+TGG | 0.465347 | 5.1:+14620409 | MS.gene86566:CDS |
| TTGGCAGAAGAAGGCGGAGT+TGG | 0.472243 | 5.1:+14614751 | MS.gene86566:intron |
| ATCAAATAAGGATACTGCCT+TGG | 0.476731 | 5.1:-14616592 | None:intergenic |
| GAACATGTCCACAGATATGA+TGG | 0.476890 | 5.1:-14619644 | None:intergenic |
| GGCTCAATCACATACTGATC+AGG | 0.477895 | 5.1:-14613628 | None:intergenic |
| AACAACTTATCAAAATGAAT+AGG | 0.479376 | 5.1:+14624039 | MS.gene86566:CDS |
| CTCTGAAAGGAGACTTTGTC+AGG | 0.482455 | 5.1:+14620796 | MS.gene86566:CDS |
| AACAACTTATGCAGTTCAAT+GGG | 0.484304 | 5.1:+14617363 | MS.gene86566:CDS |
| GAGAAAATGAAGGAGCAACT+TGG | 0.489109 | 5.1:+14620162 | MS.gene86566:CDS |
| AGTTTCAATAACTCAAACTT+CGG | 0.494399 | 5.1:-14619037 | None:intergenic |
| AAGGCCTCCTTTCTGGGAAG+AGG | 0.496085 | 5.1:-14621923 | None:intergenic |
| AGTTGCGTACTTCCTGGTGT+AGG | 0.507021 | 5.1:+14624089 | MS.gene86566:CDS |
| TAACCTGAGTTACATTTGTA+CGG | 0.511005 | 5.1:-14620218 | None:intergenic |
| ATAACTGAGCGTGAATGTGC+TGG | 0.512069 | 5.1:+14614558 | MS.gene86566:CDS |
| ACAAAGTCTCCTTTCAGAGC+AGG | 0.513920 | 5.1:-14620792 | None:intergenic |
| ATGTGGCTAGTGACGATGTA+AGG | 0.514590 | 5.1:+14619490 | MS.gene86566:CDS |
| GCCCAGGTCATTCAGCCGCT+GGG | 0.515132 | 5.1:-14615825 | None:intergenic |
| ATCATTTATTATCCCTTGAA+CGG | 0.519452 | 5.1:-14621264 | None:intergenic |
| AAATTGGCAACATATCCATC+TGG | 0.521128 | 5.1:-14617329 | None:intergenic |
| ATGTGGGCAGGCATTAGTGT+TGG | 0.524019 | 5.1:+14623473 | MS.gene86566:CDS |
| CTGTAGCAAATATACCTGTT+CGG | 0.524801 | 5.1:-14614661 | None:intergenic |
| AATCAGTGTGGGCTAATCAT+GGG | 0.525093 | 5.1:+14620739 | MS.gene86566:intron |
| AATGTTGCTGAGAAAACTAC+TGG | 0.525748 | 5.1:+14614791 | MS.gene86566:CDS |
| TTGGTGTTGTTGGGATATTG+AGG | 0.526621 | 5.1:+14613897 | MS.gene86566:CDS |
| AATCTAATATATGCCTCTCC+AGG | 0.534684 | 5.1:-14619160 | None:intergenic |
| AGACACCAAGCCTTCTAAGT+TGG | 0.543822 | 5.1:-14620414 | None:intergenic |
| TTTGATTTCCATCATATCTG+TGG | 0.545603 | 5.1:+14619636 | MS.gene86566:CDS |
| GGGAAGAGGCAGCTGTATCT+CGG | 0.547511 | 5.1:-14621909 | None:intergenic |
| GAATGTGCTGGATCTTACCT+GGG | 0.550082 | 5.1:+14614570 | MS.gene86566:CDS |
| TGAAAAGGGAGAGAAAATGA+AGG | 0.557341 | 5.1:+14620152 | MS.gene86566:CDS |
| ACAGCTGCCTCTTCCCAGAA+AGG | 0.559164 | 5.1:+14621916 | MS.gene86566:CDS |
| CAAATATACCTGTTCGGCAG+GGG | 0.559670 | 5.1:-14614655 | None:intergenic |
| AGGAGATGCACAAGAAGAAA+CGG | 0.565823 | 5.1:+14616812 | MS.gene86566:CDS |
| GCAAATATACCTGTTCGGCA+GGG | 0.569564 | 5.1:-14614656 | None:intergenic |
| GTGTCAAATGATACATTTGA+AGG | 0.569788 | 5.1:-14624183 | None:intergenic |
| AAAACCAGACCCAAAGCCAA+AGG | 0.570652 | 5.1:-14622574 | None:intergenic |
| ATCAGCATGGAGGTGAAGGA+CGG | 0.571732 | 5.1:+14619436 | MS.gene86566:intron |
| GGCTGTTGATCTTGTTAACA+AGG | 0.576603 | 5.1:+14619208 | MS.gene86566:CDS |
| AACTTATCAAAATGAATAGG+AGG | 0.579002 | 5.1:+14624042 | MS.gene86566:CDS |
| GTTCAAGGGATAATAAATGA+TGG | 0.579780 | 5.1:+14621266 | MS.gene86566:CDS |
| TTGGGCACCGCACCGTTCAA+GGG | 0.580521 | 5.1:+14621252 | MS.gene86566:CDS |
| TTGCGTACTTCCTGGTGTAG+GGG | 0.582654 | 5.1:+14624091 | MS.gene86566:CDS |
| GCCCAGCGGCTGAATGACCT+GGG | 0.583862 | 5.1:+14615824 | MS.gene86566:CDS |
| TACTTACTCCCTGTAGTCCA+AGG | 0.585221 | 5.1:+14616575 | MS.gene86566:CDS |
| GCAACCATGTCGTTGAGACA+AGG | 0.585817 | 5.1:+14622613 | MS.gene86566:CDS |
| TCAGGAACTCCTGCTCTGAA+AGG | 0.591042 | 5.1:+14620783 | MS.gene86566:CDS |
| GGACATTATATAGTTTCTGT+CGG | 0.591289 | 5.1:+14621886 | MS.gene86566:CDS |
| GCAATCTAGATTCATCGCCC+AGG | 0.594749 | 5.1:-14615841 | None:intergenic |
| TATGTGATTGAGCCAACGGA+TGG | 0.596228 | 5.1:+14613637 | MS.gene86566:CDS |
| GGAACTCGAATGTGGAGAAG+AGG | 0.596581 | 5.1:+14617299 | MS.gene86566:intron |
| AGAAGAGGAGCTGATCCAGA+TGG | 0.598685 | 5.1:+14617314 | MS.gene86566:CDS |
| GAACCAGAAGATCCATCCGT+TGG | 0.601871 | 5.1:-14613649 | None:intergenic |
| GTCTAGACAATCAATACAGT+TGG | 0.605671 | 5.1:-14620196 | None:intergenic |
| GGACTACAGGGAGTAAGTAT+GGG | 0.606764 | 5.1:-14616571 | None:intergenic |
| TTATCAAAATGAATAGGAGG+AGG | 0.607816 | 5.1:+14624045 | MS.gene86566:CDS |
| GATGGATCCATGAAACTCAT+CGG | 0.608786 | 5.1:+14613694 | MS.gene86566:CDS |
| ATATGCCTCTCCAGGACTCG+TGG | 0.612882 | 5.1:-14619152 | None:intergenic |
| GGATACTGCCTTGGACTACA+GGG | 0.615138 | 5.1:-14616583 | None:intergenic |
| AGAAGTGCTCATAGATAACA+AGG | 0.620907 | 5.1:+14616449 | MS.gene86566:CDS |
| AGACCGTACAAATGTAACTC+AGG | 0.622330 | 5.1:+14620215 | MS.gene86566:CDS |
| ATCAGTGTGGGCTAATCATG+GGG | 0.624829 | 5.1:+14620740 | MS.gene86566:intron |
| TGCAGCCACGAGTCCTGGAG+AGG | 0.625318 | 5.1:+14619147 | MS.gene86566:intron |
| GTTTGAGTTATTGAAACTCG+AGG | 0.628328 | 5.1:+14619042 | MS.gene86566:CDS |
| CTCACCTTGTCTCAACGACA+TGG | 0.630377 | 5.1:-14622617 | None:intergenic |
| AATCTTCGGAACTCGAACAG+TGG | 0.633576 | 5.1:-14613864 | None:intergenic |
| ACAATTTGCTGCCAGAGCAG+AGG | 0.638573 | 5.1:-14618998 | None:intergenic |
| CCTTGAAAGGAACTCGAATG+TGG | 0.638990 | 5.1:+14617291 | MS.gene86566:intron |
| TGGCAGTACAATGCAGCATG+TGG | 0.641511 | 5.1:+14619473 | MS.gene86566:CDS |
| TAATTGTTCCATAGAAATCG+AGG | 0.643849 | 5.1:-14616420 | None:intergenic |
| ATGAAACTAATTTAACTCTG+AGG | 0.647407 | 5.1:+14614828 | MS.gene86566:CDS |
| TCAGTATGTGATTGAGCCAA+CGG | 0.650515 | 5.1:+14613633 | MS.gene86566:CDS |
| GATGCAATTGATCTTCTGCA+AGG | 0.651722 | 5.1:+14621865 | MS.gene86566:CDS |
| CCATATTTGGCAGAAGAAGG+CGG | 0.653074 | 5.1:+14614745 | MS.gene86566:intron |
| ATAGATACCTGTCTCCAAAG+AGG | 0.664244 | 5.1:-14615866 | None:intergenic |
| TTATTATCCCTTGAACGGTG+CGG | 0.669092 | 5.1:-14621259 | None:intergenic |
| GCTGCCTCTTCCCAGAAAGG+AGG | 0.677836 | 5.1:+14621919 | MS.gene86566:CDS |
| GCAGTCGAATCCCCTACACC+AGG | 0.685387 | 5.1:-14624101 | None:intergenic |
| AATGTGCTGGATCTTACCTG+GGG | 0.707265 | 5.1:+14614571 | MS.gene86566:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 14613568 | 14624202 | 14613568 | ID=MS.gene86566 |
| chr5.1 | mRNA | 14613568 | 14624202 | 14613568 | ID=MS.gene86566.t1;Parent=MS.gene86566 |
| chr5.1 | exon | 14613568 | 14613715 | 14613568 | ID=MS.gene86566.t1.exon1;Parent=MS.gene86566.t1 |
| chr5.1 | CDS | 14613568 | 14613715 | 14613568 | ID=cds.MS.gene86566.t1;Parent=MS.gene86566.t1 |
| chr5.1 | exon | 14613846 | 14613929 | 14613846 | ID=MS.gene86566.t1.exon2;Parent=MS.gene86566.t1 |
| chr5.1 | CDS | 14613846 | 14613929 | 14613846 | ID=cds.MS.gene86566.t1;Parent=MS.gene86566.t1 |
| chr5.1 | exon | 14614541 | 14614668 | 14614541 | ID=MS.gene86566.t1.exon3;Parent=MS.gene86566.t1 |
| chr5.1 | CDS | 14614541 | 14614668 | 14614541 | ID=cds.MS.gene86566.t1;Parent=MS.gene86566.t1 |
| chr5.1 | exon | 14614758 | 14614849 | 14614758 | ID=MS.gene86566.t1.exon4;Parent=MS.gene86566.t1 |
| chr5.1 | CDS | 14614758 | 14614849 | 14614758 | ID=cds.MS.gene86566.t1;Parent=MS.gene86566.t1 |
| chr5.1 | exon | 14615823 | 14615880 | 14615823 | ID=MS.gene86566.t1.exon5;Parent=MS.gene86566.t1 |
| chr5.1 | CDS | 14615823 | 14615880 | 14615823 | ID=cds.MS.gene86566.t1;Parent=MS.gene86566.t1 |
| chr5.1 | exon | 14616414 | 14616470 | 14616414 | ID=MS.gene86566.t1.exon6;Parent=MS.gene86566.t1 |
| chr5.1 | CDS | 14616414 | 14616470 | 14616414 | ID=cds.MS.gene86566.t1;Parent=MS.gene86566.t1 |
| chr5.1 | exon | 14616566 | 14616599 | 14616566 | ID=MS.gene86566.t1.exon7;Parent=MS.gene86566.t1 |
| chr5.1 | CDS | 14616566 | 14616599 | 14616566 | ID=cds.MS.gene86566.t1;Parent=MS.gene86566.t1 |
| chr5.1 | exon | 14616753 | 14616833 | 14616753 | ID=MS.gene86566.t1.exon8;Parent=MS.gene86566.t1 |
| chr5.1 | CDS | 14616753 | 14616833 | 14616753 | ID=cds.MS.gene86566.t1;Parent=MS.gene86566.t1 |
| chr5.1 | exon | 14617300 | 14617406 | 14617300 | ID=MS.gene86566.t1.exon9;Parent=MS.gene86566.t1 |
| chr5.1 | CDS | 14617300 | 14617406 | 14617300 | ID=cds.MS.gene86566.t1;Parent=MS.gene86566.t1 |
| chr5.1 | exon | 14618983 | 14619069 | 14618983 | ID=MS.gene86566.t1.exon10;Parent=MS.gene86566.t1 |
| chr5.1 | CDS | 14618983 | 14619069 | 14618983 | ID=cds.MS.gene86566.t1;Parent=MS.gene86566.t1 |
| chr5.1 | exon | 14619152 | 14619229 | 14619152 | ID=MS.gene86566.t1.exon11;Parent=MS.gene86566.t1 |
| chr5.1 | CDS | 14619152 | 14619229 | 14619152 | ID=cds.MS.gene86566.t1;Parent=MS.gene86566.t1 |
| chr5.1 | exon | 14619441 | 14619511 | 14619441 | ID=MS.gene86566.t1.exon12;Parent=MS.gene86566.t1 |
| chr5.1 | CDS | 14619441 | 14619511 | 14619441 | ID=cds.MS.gene86566.t1;Parent=MS.gene86566.t1 |
| chr5.1 | exon | 14619626 | 14619724 | 14619626 | ID=MS.gene86566.t1.exon13;Parent=MS.gene86566.t1 |
| chr5.1 | CDS | 14619626 | 14619724 | 14619626 | ID=cds.MS.gene86566.t1;Parent=MS.gene86566.t1 |
| chr5.1 | exon | 14620137 | 14620236 | 14620137 | ID=MS.gene86566.t1.exon14;Parent=MS.gene86566.t1 |
| chr5.1 | CDS | 14620137 | 14620236 | 14620137 | ID=cds.MS.gene86566.t1;Parent=MS.gene86566.t1 |
| chr5.1 | exon | 14620385 | 14620493 | 14620385 | ID=MS.gene86566.t1.exon15;Parent=MS.gene86566.t1 |
| chr5.1 | CDS | 14620385 | 14620493 | 14620385 | ID=cds.MS.gene86566.t1;Parent=MS.gene86566.t1 |
| chr5.1 | exon | 14620745 | 14620817 | 14620745 | ID=MS.gene86566.t1.exon16;Parent=MS.gene86566.t1 |
| chr5.1 | CDS | 14620745 | 14620817 | 14620745 | ID=cds.MS.gene86566.t1;Parent=MS.gene86566.t1 |
| chr5.1 | exon | 14621250 | 14621343 | 14621250 | ID=MS.gene86566.t1.exon17;Parent=MS.gene86566.t1 |
| chr5.1 | CDS | 14621250 | 14621343 | 14621250 | ID=cds.MS.gene86566.t1;Parent=MS.gene86566.t1 |
| chr5.1 | exon | 14621865 | 14621957 | 14621865 | ID=MS.gene86566.t1.exon18;Parent=MS.gene86566.t1 |
| chr5.1 | CDS | 14621865 | 14621957 | 14621865 | ID=cds.MS.gene86566.t1;Parent=MS.gene86566.t1 |
| chr5.1 | exon | 14622568 | 14622634 | 14622568 | ID=MS.gene86566.t1.exon19;Parent=MS.gene86566.t1 |
| chr5.1 | CDS | 14622568 | 14622634 | 14622568 | ID=cds.MS.gene86566.t1;Parent=MS.gene86566.t1 |
| chr5.1 | exon | 14623438 | 14623508 | 14623438 | ID=MS.gene86566.t1.exon20;Parent=MS.gene86566.t1 |
| chr5.1 | CDS | 14623438 | 14623508 | 14623438 | ID=cds.MS.gene86566.t1;Parent=MS.gene86566.t1 |
| chr5.1 | exon | 14624029 | 14624202 | 14624029 | ID=MS.gene86566.t1.exon21;Parent=MS.gene86566.t1 |
| chr5.1 | CDS | 14624029 | 14624202 | 14624029 | ID=cds.MS.gene86566.t1;Parent=MS.gene86566.t1 |
| Gene Sequence |
| Protein sequence |
