Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64879.t1 | XP_003612352.1 | 88.2 | 458 | 48 | 4 | 1 | 455 | 1 | 455 | 1.20E-230 | 808.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64879.t1 | Q9BQ67 | 45.2 | 445 | 210 | 9 | 16 | 449 | 19 | 440 | 8.7e-89 | 328.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64879.t1 | G7K171 | 88.2 | 458 | 48 | 4 | 1 | 455 | 1 | 455 | 8.6e-231 | 808.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene011268 | MS.gene64879 | PPI |
| MS.gene053297 | MS.gene64879 | PPI |
| MS.gene26959 | MS.gene64879 | PPI |
| MS.gene64879 | MS.gene07852 | PPI |
| MS.gene64879 | MS.gene052717 | PPI |
| MS.gene64879 | MS.gene24284 | PPI |
| MS.gene64879 | MS.gene27317 | PPI |
| MS.gene53345 | MS.gene64879 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64879.t1 | MTR_5g024090 | 89.083 | 458 | 44 | 4 | 1 | 455 | 1 | 455 | 0.0 | 778 |
| MS.gene64879.t1 | MTR_8g080700 | 80.952 | 462 | 79 | 5 | 1 | 455 | 1 | 460 | 0.0 | 707 |
| MS.gene64879.t1 | MTR_4g096880 | 31.579 | 342 | 184 | 13 | 126 | 450 | 91 | 399 | 4.55e-33 | 129 |
| MS.gene64879.t1 | MTR_4g073080 | 30.000 | 300 | 174 | 10 | 151 | 445 | 109 | 377 | 2.77e-28 | 116 |
| MS.gene64879.t1 | MTR_2g039250 | 29.102 | 323 | 184 | 12 | 149 | 445 | 151 | 454 | 1.79e-27 | 115 |
| MS.gene64879.t1 | MTR_2g100090 | 26.205 | 332 | 192 | 11 | 149 | 445 | 110 | 423 | 3.90e-21 | 96.3 |
| MS.gene64879.t1 | MTR_2g016160 | 28.804 | 184 | 115 | 6 | 210 | 389 | 99 | 270 | 2.20e-13 | 71.2 |
| MS.gene64879.t1 | MTR_4g095058 | 27.568 | 185 | 106 | 8 | 215 | 388 | 328 | 495 | 6.12e-11 | 65.1 |
| MS.gene64879.t1 | MTR_4g095058 | 27.568 | 185 | 106 | 8 | 215 | 388 | 326 | 493 | 6.26e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64879.t1 | AT2G19540 | 65.011 | 443 | 147 | 6 | 18 | 455 | 20 | 459 | 0.0 | 564 |
| MS.gene64879.t1 | AT2G16780 | 26.777 | 422 | 258 | 12 | 31 | 445 | 8 | 385 | 2.71e-37 | 141 |
| MS.gene64879.t1 | AT5G58230 | 31.195 | 343 | 200 | 13 | 92 | 422 | 54 | 372 | 2.84e-36 | 139 |
| MS.gene64879.t1 | AT4G35050 | 26.303 | 422 | 260 | 13 | 31 | 445 | 9 | 386 | 1.79e-34 | 134 |
| MS.gene64879.t1 | AT2G19520 | 26.444 | 329 | 188 | 12 | 149 | 445 | 157 | 463 | 1.28e-22 | 100 |
| MS.gene64879.t1 | AT4G29730 | 25.688 | 327 | 189 | 10 | 149 | 443 | 137 | 441 | 2.12e-21 | 97.1 |
| MS.gene64879.t1 | AT4G29730 | 25.161 | 310 | 179 | 9 | 149 | 427 | 137 | 424 | 7.62e-21 | 95.1 |
| MS.gene64879.t1 | AT4G29730 | 25.161 | 310 | 179 | 9 | 149 | 427 | 137 | 424 | 7.62e-21 | 95.1 |
| MS.gene64879.t1 | AT1G29260 | 28.261 | 184 | 116 | 5 | 210 | 389 | 98 | 269 | 1.33e-12 | 68.9 |
| MS.gene64879.t1 | AT4G34460 | 27.072 | 181 | 125 | 4 | 209 | 385 | 141 | 318 | 4.06e-12 | 67.8 |
| MS.gene64879.t1 | AT4G34460 | 27.072 | 181 | 125 | 4 | 209 | 385 | 146 | 323 | 4.45e-12 | 67.8 |
| MS.gene64879.t1 | AT4G34460 | 27.072 | 181 | 125 | 4 | 209 | 385 | 146 | 323 | 4.59e-12 | 67.8 |
| MS.gene64879.t1 | AT4G34460 | 27.072 | 181 | 125 | 4 | 209 | 385 | 84 | 261 | 5.27e-12 | 67.0 |
| MS.gene64879.t1 | AT3G63460 | 23.305 | 236 | 149 | 8 | 216 | 446 | 121 | 329 | 1.54e-11 | 67.4 |
| MS.gene64879.t1 | AT3G63460 | 23.305 | 236 | 149 | 8 | 216 | 446 | 121 | 329 | 1.54e-11 | 67.4 |
| MS.gene64879.t1 | AT3G63460 | 23.305 | 236 | 149 | 8 | 216 | 446 | 121 | 329 | 1.59e-11 | 67.4 |
Find 123 sgRNAs with CRISPR-Local
Find 300 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTAAAGTATCTAATATTTC+TGG | 0.117527 | 5.3:+13967896 | MS.gene64879:CDS |
| CGGTGCCAGTGCAGTTCTTT+AGG | 0.168707 | 5.3:-13971635 | None:intergenic |
| ATTGACCAAACTCCCTTTAC+TGG | 0.228674 | 5.3:+13970199 | MS.gene64879:CDS |
| ATATTGGATGGCCTTGTCTT+AGG | 0.248468 | 5.3:+13967342 | MS.gene64879:CDS |
| AAACCTTCTTGGAATTCTAT+TGG | 0.254653 | 5.3:+13967869 | MS.gene64879:CDS |
| CTCCCCATGATGCACATATA+TGG | 0.259643 | 5.3:-13968206 | None:intergenic |
| TGGATAAAAGCATTGCAATA+TGG | 0.294456 | 5.3:+13970430 | MS.gene64879:CDS |
| CAGGAGCCCTTACTTGTCCT+TGG | 0.296211 | 5.3:-13971378 | None:intergenic |
| TTCTTCAGTGCCACAGCTTC+CGG | 0.301659 | 5.3:+13967229 | MS.gene64879:CDS |
| GGTGCCAGTGCAGTTCTTTA+GGG | 0.309912 | 5.3:-13971634 | None:intergenic |
| AACCTTCTTGGAATTCTATT+GGG | 0.322573 | 5.3:+13967870 | MS.gene64879:CDS |
| CCCAGGCTGAGAAACCTTCT+TGG | 0.327782 | 5.3:+13967858 | MS.gene64879:intron |
| ATTGTACTGAACAGCGTTAA+AGG | 0.332444 | 5.3:+13970598 | MS.gene64879:intron |
| CACTGGCACCGACAGATTCC+TGG | 0.338633 | 5.3:+13971647 | MS.gene64879:CDS |
| AGTTGGGGAGGCAGATCTTC+AGG | 0.338811 | 5.3:-13971397 | None:intergenic |
| TTGCAGAGTCACCAGTTTCA+TGG | 0.348687 | 5.3:-13967943 | None:intergenic |
| CCAGGTTGCCACACTTTAAC+CGG | 0.362889 | 5.3:-13967248 | None:intergenic |
| CCAAGGAGTTGATGTAGTTC+AGG | 0.372282 | 5.3:+13969911 | MS.gene64879:CDS |
| AGGAGCCCTTACTTGTCCTT+GGG | 0.379105 | 5.3:-13971377 | None:intergenic |
| AAGATGAAGAAGGTGTTGTC+GGG | 0.385596 | 5.3:+13968002 | MS.gene64879:CDS |
| ACCAGATGCCAACAATTTAT+CGG | 0.393309 | 5.3:-13970623 | None:intergenic |
| TCCACACACAGTGTACTTCA+TGG | 0.396819 | 5.3:+13967495 | MS.gene64879:CDS |
| TCCCCATGATGCACATATAT+GGG | 0.405787 | 5.3:-13968205 | None:intergenic |
| CTGGTGAATAAATAATAGTT+GGG | 0.415023 | 5.3:-13971413 | None:intergenic |
| TCATGATCTCAGATTGGTTA+AGG | 0.418616 | 5.3:+13970669 | MS.gene64879:CDS |
| GGATAAAAGCATTGCAATAT+GGG | 0.425531 | 5.3:+13970431 | MS.gene64879:CDS |
| GTAAAGTATCTAATATTTCT+GGG | 0.426041 | 5.3:+13967897 | MS.gene64879:CDS |
| CCTGGTGAATAAATAATAGT+TGG | 0.428338 | 5.3:-13971414 | None:intergenic |
| TTTGTGGCATGGAGCGTATC+CGG | 0.429972 | 5.3:-13968179 | None:intergenic |
| CTCAAATGTTTGAAGGCATA+AGG | 0.430805 | 5.3:-13971706 | None:intergenic |
| CTCATGAAGGTTGTATCAAC+CGG | 0.432321 | 5.3:+13968160 | MS.gene64879:CDS |
| GATATTGTTCAAGACACCTT+AGG | 0.434369 | 5.3:+13967454 | MS.gene64879:CDS |
| GCAGTGGATACTATCATTCC+AGG | 0.434676 | 5.3:-13971665 | None:intergenic |
| TATGTCCAGTAAAGGGAGTT+TGG | 0.438747 | 5.3:-13970204 | None:intergenic |
| ACCGATAAATTGTTGGCATC+TGG | 0.440153 | 5.3:+13970622 | MS.gene64879:CDS |
| AACTCCCTTTACTGGACATA+CGG | 0.442897 | 5.3:+13970207 | MS.gene64879:CDS |
| ATGAAGGTTATGCTATAGAC+TGG | 0.457860 | 5.3:+13969961 | MS.gene64879:CDS |
| CTAGAACCCAAGGACAAGTA+AGG | 0.458381 | 5.3:+13971371 | MS.gene64879:CDS |
| TGTAGAAAGGGACGAGGAAG+AGG | 0.460518 | 5.3:+13971333 | MS.gene64879:CDS |
| AATCCTTTGCCACAGAATAT+GGG | 0.463297 | 5.3:+13971303 | MS.gene64879:intron |
| GACTGGGATCCTCATGTTGA+AGG | 0.476746 | 5.3:+13969978 | MS.gene64879:CDS |
| GAGGAAGTTGCCTGCAAAGT+AGG | 0.476755 | 5.3:-13968028 | None:intergenic |
| TGGATGTGATTGGATGCTTA+TGG | 0.478480 | 5.3:-13971096 | None:intergenic |
| GAAGATGAAGAAGGTGTTGT+CGG | 0.483253 | 5.3:+13968001 | MS.gene64879:CDS |
| TAAAGGCACCGATAAATTGT+TGG | 0.485011 | 5.3:+13970615 | MS.gene64879:CDS |
| ATCTGTTCATGATCTCAGAT+TGG | 0.485225 | 5.3:+13970663 | MS.gene64879:CDS |
| GCCCCATATATGTGCATCAT+GGG | 0.490939 | 5.3:+13968203 | MS.gene64879:CDS |
| CCTCGTCCCTTTCTACAGAT+AGG | 0.495464 | 5.3:-13971327 | None:intergenic |
| TTGGCATCTGGTAGTGATGA+TGG | 0.499913 | 5.3:+13970634 | MS.gene64879:CDS |
| CCAACTATTATTTATTCACC+AGG | 0.500322 | 5.3:+13971414 | MS.gene64879:CDS |
| AAATTTAAGCACAAAGATGA+AGG | 0.501413 | 5.3:+13969945 | MS.gene64879:CDS |
| GAGTCACCAGTTTCATGGTT+AGG | 0.501994 | 5.3:-13967938 | None:intergenic |
| CCGGTGCCTAACCATGAAAC+TGG | 0.502226 | 5.3:+13967932 | MS.gene64879:CDS |
| CCGGTTAAAGTGTGGCAACC+TGG | 0.505159 | 5.3:+13967248 | MS.gene64879:CDS |
| TCTTCCAACTTGTCCACACC+AGG | 0.505184 | 5.3:-13967266 | None:intergenic |
| GGGTGCTCTCAAATGTTTGA+AGG | 0.507205 | 5.3:-13971713 | None:intergenic |
| TGAATGTCTTGTCATGGAAC+AGG | 0.507712 | 5.3:+13970508 | MS.gene64879:CDS |
| CAATATGGGATACTCGTTGT+AGG | 0.507873 | 5.3:+13970445 | MS.gene64879:CDS |
| CACACAGTGTACTTCATGGC+AGG | 0.508453 | 5.3:+13967499 | MS.gene64879:CDS |
| TTCCACTCAATGGATGTGAT+TGG | 0.511062 | 5.3:-13971106 | None:intergenic |
| TATGGGACCTATCTGTAGAA+AGG | 0.512379 | 5.3:+13971320 | MS.gene64879:CDS |
| CAATAATAATATTTATCTGT+GGG | 0.519586 | 5.3:+13970150 | MS.gene64879:CDS |
| TGTGCATCATGGGGAGACTC+TGG | 0.522901 | 5.3:+13968213 | MS.gene64879:CDS |
| CCTGAACTACATCAACTCCT+TGG | 0.523733 | 5.3:-13969911 | None:intergenic |
| AGCCCCATATATGTGCATCA+TGG | 0.524674 | 5.3:+13968202 | MS.gene64879:CDS |
| CTACCCGTATGTCCAGTAAA+GGG | 0.534623 | 5.3:-13970211 | None:intergenic |
| ATGGGACCTATCTGTAGAAA+GGG | 0.534636 | 5.3:+13971321 | MS.gene64879:CDS |
| ACAGAAACGGAAGGTGTCCA+AGG | 0.536351 | 5.3:+13969894 | MS.gene64879:CDS |
| GGGAGACTCTGGTCATGTGC+AGG | 0.540008 | 5.3:+13968224 | MS.gene64879:CDS |
| TTCTGGGAAGACACGTGAGC+CGG | 0.540677 | 5.3:+13967913 | MS.gene64879:CDS |
| CCAGTTTCATGGTTAGGCAC+CGG | 0.540898 | 5.3:-13967932 | None:intergenic |
| ACTACCCGTATGTCCAGTAA+AGG | 0.541370 | 5.3:-13970212 | None:intergenic |
| ATAGTATCCACTGCAGCAGA+TGG | 0.554543 | 5.3:+13971674 | MS.gene64879:CDS |
| GCAATAATAATATTTATCTG+TGG | 0.554630 | 5.3:+13970149 | MS.gene64879:CDS |
| TGAAGAGAGTTGTAAGCAGA+AGG | 0.566080 | 5.3:-13967311 | None:intergenic |
| GGCTCTAGCAGAGACAGAAA+CGG | 0.566328 | 5.3:+13969881 | MS.gene64879:CDS |
| TTCCATGTTGCAGCAGATGT+AGG | 0.568203 | 5.3:-13970175 | None:intergenic |
| AAGCAGCGAAAGAAGAAGCT+TGG | 0.569703 | 5.3:-13971135 | None:intergenic |
| GGACATGAGCTCTCATCTCA+AGG | 0.571180 | 5.3:+13969860 | MS.gene64879:CDS |
| ATCCCAATAGAATTCCAAGA+AGG | 0.572795 | 5.3:-13967872 | None:intergenic |
| GATGATAGTGAAGATGAAGA+AGG | 0.575436 | 5.3:+13967992 | MS.gene64879:CDS |
| TGGCATCTGGTAGTGATGAT+GGG | 0.579159 | 5.3:+13970635 | MS.gene64879:CDS |
| TGAAACTGGTGACTCTGCAA+TGG | 0.580008 | 5.3:+13967946 | MS.gene64879:CDS |
| GTTGAATCCATCTGCTGCAG+TGG | 0.582936 | 5.3:-13971681 | None:intergenic |
| AGCCTACATCTGCTGCAACA+TGG | 0.586634 | 5.3:+13970173 | MS.gene64879:CDS |
| TTGGCGTGGATTCCACTCAA+TGG | 0.586688 | 5.3:-13971116 | None:intergenic |
| GTACTTCATGGCAGGGACAC+AGG | 0.587280 | 5.3:+13967507 | MS.gene64879:CDS |
| TTGCGGAGGGTAACTCATGA+AGG | 0.591600 | 5.3:+13968147 | MS.gene64879:CDS |
| TAAAGTGTGGCAACCTGGTG+TGG | 0.592539 | 5.3:+13967253 | MS.gene64879:CDS |
| GGGATCCTCATGTTGAAGGA+AGG | 0.595093 | 5.3:+13969982 | MS.gene64879:CDS |
| TGAATAAATAATAGTTGGGG+AGG | 0.598369 | 5.3:-13971409 | None:intergenic |
| GCAACCTGGTGTGGACAAGT+TGG | 0.600154 | 5.3:+13967262 | MS.gene64879:CDS |
| AGAAAGGGACGAGGAAGAGG+AGG | 0.601145 | 5.3:+13971336 | MS.gene64879:CDS |
| GTTCGCACCTACAGTTGCGG+AGG | 0.602660 | 5.3:+13968133 | MS.gene64879:intron |
| TAGAACCCAAGGACAAGTAA+GGG | 0.603127 | 5.3:+13971372 | MS.gene64879:CDS |
| CTGATGTGAATGTCTTGTCA+TGG | 0.606062 | 5.3:+13970502 | MS.gene64879:CDS |
| CACACTTTAACCGGAAGCTG+TGG | 0.608669 | 5.3:-13967239 | None:intergenic |
| AATACCCTAAAGAACTGCAC+TGG | 0.613846 | 5.3:+13971630 | MS.gene64879:CDS |
| AAAAGCCTTCCTTCAACATG+AGG | 0.614089 | 5.3:-13969987 | None:intergenic |
| TTACGTAAGCTGATTATCAG+AGG | 0.615222 | 5.3:-13971161 | None:intergenic |
| CACAGCTTCCGGTTAAAGTG+TGG | 0.618649 | 5.3:+13967240 | MS.gene64879:CDS |
| ACTCCCTTTACTGGACATAC+GGG | 0.621217 | 5.3:+13970208 | MS.gene64879:CDS |
| CCTATCTGTAGAAAGGGACG+AGG | 0.621911 | 5.3:+13971327 | MS.gene64879:CDS |
| CCCCATGATGCACATATATG+GGG | 0.623982 | 5.3:-13968204 | None:intergenic |
| TTGTGGATAGGGAGATTCTG+TGG | 0.630192 | 5.3:+13971057 | MS.gene64879:intron |
| CTATCATTCCAGGAATCTGT+CGG | 0.631109 | 5.3:-13971655 | None:intergenic |
| ATCCAATCACATCCATTGAG+TGG | 0.634447 | 5.3:+13971104 | MS.gene64879:CDS |
| TTCGCACCTACAGTTGCGGA+GGG | 0.634690 | 5.3:+13968134 | MS.gene64879:intron |
| TATGGGATACTCGTTGTAGG+AGG | 0.638598 | 5.3:+13970448 | MS.gene64879:CDS |
| GAATTTATAGCTAGAACCCA+AGG | 0.640490 | 5.3:+13971361 | MS.gene64879:CDS |
| AGATGAAGAAGGTGTTGTCG+GGG | 0.641716 | 5.3:+13968003 | MS.gene64879:CDS |
| ACACAGTGTACTTCATGGCA+GGG | 0.642672 | 5.3:+13967500 | MS.gene64879:CDS |
| GCCATGAAGTACACTGTGTG+TGG | 0.644972 | 5.3:-13967496 | None:intergenic |
| GCGAAAGAAGAAGCTTGGCG+TGG | 0.649293 | 5.3:-13971130 | None:intergenic |
| TGTGCTATAAAAGTCAACAA+TGG | 0.656008 | 5.3:-13970474 | None:intergenic |
| GATGAAGAAGGTGTTGTCGG+GGG | 0.660596 | 5.3:+13968004 | MS.gene64879:CDS |
| TGAAGGTTATGCTATAGACT+GGG | 0.664515 | 5.3:+13969962 | MS.gene64879:CDS |
| TGGTGAATAAATAATAGTTG+GGG | 0.664659 | 5.3:-13971412 | None:intergenic |
| CCCCATATATGTGCATCATG+GGG | 0.675644 | 5.3:+13968204 | MS.gene64879:CDS |
| TGACTCTGCAATGGATAGTG+AGG | 0.687260 | 5.3:+13967955 | MS.gene64879:CDS |
| CTAGCAGAGACAGAAACGGA+AGG | 0.693842 | 5.3:+13969885 | MS.gene64879:CDS |
| TATGGAAATTACCTAAGACA+AGG | 0.706154 | 5.3:-13967353 | None:intergenic |
| TAGTGAGGACAGTGACAGTG+AGG | 0.744988 | 5.3:+13967970 | MS.gene64879:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGCAAAAAATTAAATCATA+AGG | - | chr5.3:13968263-13968282 | None:intergenic | 15.0% |
| !! | ACAATGATTAATGAATTATA+TGG | - | chr5.3:13970583-13970602 | None:intergenic | 15.0% |
| !! | CAATAATAATATTTATCTGT+GGG | + | chr5.3:13970150-13970169 | MS.gene64879:CDS | 15.0% |
| !! | CATATCATATTTAATAACAA+AGG | - | chr5.3:13971019-13971038 | None:intergenic | 15.0% |
| !! | GTTATGTTAAAATCAAATAT+AGG | - | chr5.3:13968500-13968519 | None:intergenic | 15.0% |
| !! | TCTTACTATTACTAATAATT+TGG | + | chr5.3:13968106-13968125 | MS.gene64879:intron | 15.0% |
| !! | TTATACAAAAATATTTGACT+CGG | - | chr5.3:13969806-13969825 | None:intergenic | 15.0% |
| !!! | TACTTTAAAAAATGCATTAA+TGG | - | chr5.3:13970897-13970916 | None:intergenic | 15.0% |
| !!! | TTAAATTATGAACAACTTTT+TGG | - | chr5.3:13968704-13968723 | None:intergenic | 15.0% |
| !! | AAAAAACTACATATGTTAAG+AGG | - | chr5.3:13970322-13970341 | None:intergenic | 20.0% |
| !! | AAAGGTAATGATAAAGAAAA+AGG | - | chr5.3:13971264-13971283 | None:intergenic | 20.0% |
| !! | AAGCAAAAAATAATATACCT+TGG | - | chr5.3:13967109-13967128 | None:intergenic | 20.0% |
| !! | AAGGTAATGATAAAGAAAAA+GGG | - | chr5.3:13971263-13971282 | None:intergenic | 20.0% |
| !! | AATAACAAAGGCAAAATAAT+CGG | - | chr5.3:13971007-13971026 | None:intergenic | 20.0% |
| !! | AATCATTCAACAGTTAATTT+GGG | - | chr5.3:13969125-13969144 | None:intergenic | 20.0% |
| !! | ACAATATTCATCATATCAAA+TGG | - | chr5.3:13969595-13969614 | None:intergenic | 20.0% |
| !! | ACCTTAACTAAGTAAATATT+GGG | + | chr5.3:13968614-13968633 | MS.gene64879:intron | 20.0% |
| !! | ATAAGGAAAAAAGAATAATC+AGG | - | chr5.3:13970763-13970782 | None:intergenic | 20.0% |
| !! | ATTTCAAAGATTAACTTACA+AGG | - | chr5.3:13969414-13969433 | None:intergenic | 20.0% |
| !! | GCAATAATAATATTTATCTG+TGG | + | chr5.3:13970149-13970168 | MS.gene64879:CDS | 20.0% |
| !! | TAATAAAAACTCAAATGTAG+AGG | - | chr5.3:13968050-13968069 | None:intergenic | 20.0% |
| !! | TTATATGGAAATTCATTTGA+CGG | - | chr5.3:13970568-13970587 | None:intergenic | 20.0% |
| !!! | ATTTCTTTTAACTTGAAACA+GGG | + | chr5.3:13971602-13971621 | MS.gene64879:intron | 20.0% |
| !!! | ATTTTGATTCTAATGAGTTT+AGG | + | chr5.3:13969251-13969270 | MS.gene64879:intron | 20.0% |
| !!! | CAAAACTTTTAAAAATCCAA+AGG | - | chr5.3:13971282-13971301 | None:intergenic | 20.0% |
| !!! | GTAAAGTATCTAATATTTCT+GGG | + | chr5.3:13967897-13967916 | MS.gene64879:CDS | 20.0% |
| !!! | GTAAGTTAATCTTTGAAATA+AGG | + | chr5.3:13969415-13969434 | MS.gene64879:intron | 20.0% |
| !!! | GTATAATTTGTATTGACTTT+TGG | + | chr5.3:13970538-13970557 | MS.gene64879:intron | 20.0% |
| !!! | TATTGATACAAGTTCTAAAA+GGG | - | chr5.3:13968543-13968562 | None:intergenic | 20.0% |
| !!! | TATTTCTTTTAACTTGAAAC+AGG | + | chr5.3:13971601-13971620 | MS.gene64879:intron | 20.0% |
| !!! | TGATTTAATTTTTTGCTTTG+TGG | + | chr5.3:13968265-13968284 | MS.gene64879:intron | 20.0% |
| !!! | TGTAAAGTATCTAATATTTC+TGG | + | chr5.3:13967896-13967915 | MS.gene64879:CDS | 20.0% |
| !!! | TTATTGATACAAGTTCTAAA+AGG | - | chr5.3:13968544-13968563 | None:intergenic | 20.0% |
| !!! | TTCAAGTTAAAAGAAATAAG+AGG | - | chr5.3:13971599-13971618 | None:intergenic | 20.0% |
| !!! | TTGTGTCTATAAATTGTTTT+CGG | + | chr5.3:13971568-13971587 | MS.gene64879:intron | 20.0% |
| !!! | TTTTTCTTTATCATTACCTT+TGG | + | chr5.3:13971263-13971282 | MS.gene64879:intron | 20.0% |
| ! | AAATTTAAGCACAAAGATGA+AGG | + | chr5.3:13969945-13969964 | MS.gene64879:CDS | 25.0% |
| ! | ACCCAATATTTACTTAGTTA+AGG | - | chr5.3:13968618-13968637 | None:intergenic | 25.0% |
| ! | ACTATTCATTACCAATCAAA+TGG | + | chr5.3:13967598-13967617 | MS.gene64879:intron | 25.0% |
| ! | AGGTAATGATAAAGAAAAAG+GGG | - | chr5.3:13971262-13971281 | None:intergenic | 25.0% |
| ! | AGTAATGAATTTGTAGATCT+GGG | + | chr5.3:13969839-13969858 | MS.gene64879:intron | 25.0% |
| ! | ATTAATGGTACTTGATTCAA+AGG | - | chr5.3:13970882-13970901 | None:intergenic | 25.0% |
| ! | CAAAAAAATTCTCTTCTCTA+GGG | - | chr5.3:13970398-13970417 | None:intergenic | 25.0% |
| ! | CAATCATTCAACAGTTAATT+TGG | - | chr5.3:13969126-13969145 | None:intergenic | 25.0% |
| ! | CAGAAATTAAACAAAACGTA+TGG | - | chr5.3:13967374-13967393 | None:intergenic | 25.0% |
| ! | CATCATATCAATGAAATCAA+TGG | - | chr5.3:13967826-13967845 | None:intergenic | 25.0% |
| ! | CTGGTGAATAAATAATAGTT+GGG | - | chr5.3:13971416-13971435 | None:intergenic | 25.0% |
| ! | GACCTTAACTAAGTAAATAT+TGG | + | chr5.3:13968613-13968632 | MS.gene64879:intron | 25.0% |
| ! | TAATATGTTGTTAGGACATA+AGG | - | chr5.3:13970780-13970799 | None:intergenic | 25.0% |
| ! | TAATGGTGTAATATGTTGTT+AGG | - | chr5.3:13970788-13970807 | None:intergenic | 25.0% |
| ! | TCAAAATGACATAATCTTTG+TGG | - | chr5.3:13969238-13969257 | None:intergenic | 25.0% |
| ! | TGGTGAATAAATAATAGTTG+GGG | - | chr5.3:13971415-13971434 | None:intergenic | 25.0% |
| ! | TGTGTGTATTCATCATTTAT+AGG | + | chr5.3:13967546-13967565 | MS.gene64879:intron | 25.0% |
| ! | TTAACTTAAACTTATCTGAG+AGG | + | chr5.3:13970805-13970824 | MS.gene64879:intron | 25.0% |
| !! | ATCATTCAACAGTTAATTTG+GGG | - | chr5.3:13969124-13969143 | None:intergenic | 25.0% |
| !! | ATGTGTTGTTATAAACCAAA+AGG | - | chr5.3:13968407-13968426 | None:intergenic | 25.0% |
| !! | CTCAGATAAGTTTAAGTTAA+TGG | - | chr5.3:13970805-13970824 | None:intergenic | 25.0% |
| !! | CTTGCTATATGATAAAAATG+AGG | + | chr5.3:13969627-13969646 | MS.gene64879:intron | 25.0% |
| !! | GTTTAATTTCTGCTTAGTAT+AGG | + | chr5.3:13967382-13967401 | MS.gene64879:intron | 25.0% |
| !! | TTGTGCTTAAATTTTTGTAG+TGG | - | chr5.3:13969939-13969958 | None:intergenic | 25.0% |
| !!! | AACTCTGATTATTTTAGTGT+AGG | + | chr5.3:13968733-13968752 | MS.gene64879:intron | 25.0% |
| !!! | AAGTGAATTATTTTGTGGAT+AGG | + | chr5.3:13971045-13971064 | MS.gene64879:intron | 25.0% |
| !!! | AATATACCTTGGTCTTTTTT+TGG | - | chr5.3:13967098-13967117 | None:intergenic | 25.0% |
| !!! | AGTGAATTATTTTGTGGATA+GGG | + | chr5.3:13971046-13971065 | MS.gene64879:intron | 25.0% |
| !!! | TAGAGAGTTATTTTCTGAAT+TGG | + | chr5.3:13968648-13968667 | MS.gene64879:intron | 25.0% |
| !!! | TGAACCAAGTTATTTCTATT+GGG | + | chr5.3:13968863-13968882 | MS.gene64879:intron | 25.0% |
| !!! | TGCTTTAGTTTTGTCATATT+TGG | + | chr5.3:13970728-13970747 | MS.gene64879:intron | 25.0% |
| !!! | TGTGAAAGTGAATTATTTTG+TGG | + | chr5.3:13971040-13971059 | MS.gene64879:intron | 25.0% |
| !!! | TTGAACCAAGTTATTTCTAT+TGG | + | chr5.3:13968862-13968881 | MS.gene64879:intron | 25.0% |
| !!! | TTTATTTTGATGCTATATGC+TGG | + | chr5.3:13967714-13967733 | MS.gene64879:intron | 25.0% |
| AAACCTTCTTGGAATTCTAT+TGG | + | chr5.3:13967869-13967888 | MS.gene64879:CDS | 30.0% | |
| AAAGCTCAAAAGTCCATTAA+AGG | - | chr5.3:13967681-13967700 | None:intergenic | 30.0% | |
| AAATATGATACATAAGCCAG+TGG | - | chr5.3:13969034-13969053 | None:intergenic | 30.0% | |
| AACCTTCTTGGAATTCTATT+GGG | + | chr5.3:13967870-13967889 | MS.gene64879:CDS | 30.0% | |
| AACTACATATGTTAAGAGGT+TGG | - | chr5.3:13970318-13970337 | None:intergenic | 30.0% | |
| AAGTATTATCTTACCAATGC+AGG | - | chr5.3:13969510-13969529 | None:intergenic | 30.0% | |
| ACGTAATATGTTGAGAAAAG+TGG | - | chr5.3:13971449-13971468 | None:intergenic | 30.0% | |
| AGACACTAATTGTGAAACAT+AGG | + | chr5.3:13969368-13969387 | MS.gene64879:intron | 30.0% | |
| AGGATACAACAATGAGATAA+TGG | - | chr5.3:13970841-13970860 | None:intergenic | 30.0% | |
| ATCAAAACCAGAAGAAAACA+AGG | - | chr5.3:13970278-13970297 | None:intergenic | 30.0% | |
| ATGTTGATCTTCATGTTTGA+AGG | + | chr5.3:13970121-13970140 | MS.gene64879:intron | 30.0% | |
| ATTAGTACTTCATAGCATGT+AGG | - | chr5.3:13968810-13968829 | None:intergenic | 30.0% | |
| CATATAGCAAGAATTATACC+TGG | - | chr5.3:13969618-13969637 | None:intergenic | 30.0% | |
| CATTGTGCAAATTTATATCC+GGG | + | chr5.3:13967181-13967200 | MS.gene64879:intron | 30.0% | |
| CCAACTATTATTTATTCACC+AGG | + | chr5.3:13971414-13971433 | MS.gene64879:CDS | 30.0% | |
| CCTGGTGAATAAATAATAGT+TGG | - | chr5.3:13971417-13971436 | None:intergenic | 30.0% | |
| GAATTTGACAAACAATTCGA+TGG | - | chr5.3:13971213-13971232 | None:intergenic | 30.0% | |
| GACACTAATTGTGAAACATA+GGG | + | chr5.3:13969369-13969388 | MS.gene64879:intron | 30.0% | |
| GAGTAATGAATTTGTAGATC+TGG | + | chr5.3:13969838-13969857 | MS.gene64879:intron | 30.0% | |
| GATACTACAAAAGAGTTCAA+GGG | - | chr5.3:13968779-13968798 | None:intergenic | 30.0% | |
| GCAAAAAAATTCTCTTCTCT+AGG | - | chr5.3:13970399-13970418 | None:intergenic | 30.0% | |
| GCATTGTGCAAATTTATATC+CGG | + | chr5.3:13967180-13967199 | MS.gene64879:intron | 30.0% | |
| TATCACTAGTTATGATGACT+AGG | - | chr5.3:13967803-13967822 | None:intergenic | 30.0% | |
| TATGGAAATTACCTAAGACA+AGG | - | chr5.3:13967356-13967375 | None:intergenic | 30.0% | |
| TGAATAAATAATAGTTGGGG+AGG | - | chr5.3:13971412-13971431 | None:intergenic | 30.0% | |
| TGATATGATGAATATTGTCC+AGG | + | chr5.3:13969597-13969616 | MS.gene64879:intron | 30.0% | |
| TGTAGTGCTAAACATTCTAT+AGG | - | chr5.3:13969441-13969460 | None:intergenic | 30.0% | |
| TGTGCTATAAAAGTCAACAA+TGG | - | chr5.3:13970477-13970496 | None:intergenic | 30.0% | |
| TGTTGATCTTCATGTTTGAA+GGG | + | chr5.3:13970122-13970141 | MS.gene64879:intron | 30.0% | |
| TTATAACAACACATGTCAGT+TGG | + | chr5.3:13968413-13968432 | MS.gene64879:intron | 30.0% | |
| TTGGTAAGATAATACTTCTG+CGG | + | chr5.3:13969513-13969532 | MS.gene64879:intron | 30.0% | |
| TTTCACAATTAGTGTCTTCA+TGG | - | chr5.3:13969365-13969384 | None:intergenic | 30.0% | |
| ! | ATAAAGCCCTAAAACTTGTT+CGG | - | chr5.3:13971235-13971254 | None:intergenic | 30.0% |
| ! | CAAATTCCGAACAAGTTTTA+GGG | + | chr5.3:13971226-13971245 | MS.gene64879:intron | 30.0% |
| ! | CACTAATAATGATTGCCTTT+TGG | + | chr5.3:13968389-13968408 | MS.gene64879:intron | 30.0% |
| ! | GAGAACTTTTTGTCCTTTAA+TGG | + | chr5.3:13967665-13967684 | MS.gene64879:intron | 30.0% |
| ! | TCAAATTCCGAACAAGTTTT+AGG | + | chr5.3:13971225-13971244 | MS.gene64879:intron | 30.0% |
| ! | TGTTTTGTAGACGAATATCT+AGG | + | chr5.3:13967643-13967662 | MS.gene64879:intron | 30.0% |
| ! | TTCTTTTCGAAATATGCCTA+AGG | - | chr5.3:13967473-13967492 | None:intergenic | 30.0% |
| !! | AAAGAGAGTGTTAAAGAGTT+TGG | + | chr5.3:13969161-13969180 | MS.gene64879:intron | 30.0% |
| !! | GGATAAAAGCATTGCAATAT+GGG | + | chr5.3:13970431-13970450 | MS.gene64879:CDS | 30.0% |
| !! | TGGATAAAAGCATTGCAATA+TGG | + | chr5.3:13970430-13970449 | MS.gene64879:CDS | 30.0% |
| !! | TTAAATTTTAGCAGCAGCTA+AGG | + | chr5.3:13969702-13969721 | MS.gene64879:intron | 30.0% |
| !!! | TAACTAGCTCTGAATTTTGT+CGG | - | chr5.3:13969566-13969585 | None:intergenic | 30.0% |
| !!! | TTTTTTTGCTTCTTGTTCTG+TGG | + | chr5.3:13970410-13970429 | MS.gene64879:CDS | 30.0% |
| AAAGTACATCTAGATGCACT+TGG | + | chr5.3:13970911-13970930 | MS.gene64879:intron | 35.0% | |
| AACAAAGGCAAAATAATCGG+CGG | - | chr5.3:13971004-13971023 | None:intergenic | 35.0% | |
| AATCCTTTGCCACAGAATAT+GGG | + | chr5.3:13971303-13971322 | MS.gene64879:intron | 35.0% | |
| ACCAGATGCCAACAATTTAT+CGG | - | chr5.3:13970626-13970645 | None:intergenic | 35.0% | |
| AGTGTTAAAGAGTTTGGAAG+TGG | + | chr5.3:13969167-13969186 | MS.gene64879:intron | 35.0% | |
| AGTTCAAGGGTTCCAAATAA+TGG | - | chr5.3:13968766-13968785 | None:intergenic | 35.0% | |
| ATCCCAATAGAATTCCAAGA+AGG | - | chr5.3:13967875-13967894 | None:intergenic | 35.0% | |
| ATCTGTTCATGATCTCAGAT+TGG | + | chr5.3:13970663-13970682 | MS.gene64879:CDS | 35.0% | |
| ATGAAGGTTATGCTATAGAC+TGG | + | chr5.3:13969961-13969980 | MS.gene64879:CDS | 35.0% | |
| ATGTTGCAATCGCAATACTT+AGG | - | chr5.3:13969662-13969681 | None:intergenic | 35.0% | |
| ATTGTACTGAACAGCGTTAA+AGG | + | chr5.3:13970598-13970617 | MS.gene64879:intron | 35.0% | |
| CACAATGCCACAAAAATTAG+AGG | - | chr5.3:13967168-13967187 | None:intergenic | 35.0% | |
| CCAACCCAATAGAAATAACT+TGG | - | chr5.3:13968870-13968889 | None:intergenic | 35.0% | |
| CGATACTACAAAAGAGTTCA+AGG | - | chr5.3:13968780-13968799 | None:intergenic | 35.0% | |
| CTCAACATATTACGTACGTT+TGG | + | chr5.3:13971454-13971473 | MS.gene64879:intron | 35.0% | |
| CTCTAGCATGTCTTTATATC+TGG | + | chr5.3:13970075-13970094 | MS.gene64879:intron | 35.0% | |
| CTGGTTATCAAAGAGATATG+AGG | + | chr5.3:13970094-13970113 | MS.gene64879:intron | 35.0% | |
| CTTAGTAGAACATCTGTCAA+AGG | - | chr5.3:13969081-13969100 | None:intergenic | 35.0% | |
| GAATTTATAGCTAGAACCCA+AGG | + | chr5.3:13971361-13971380 | MS.gene64879:CDS | 35.0% | |
| GATAGTTAGCTACATGATTG+TGG | + | chr5.3:13969314-13969333 | MS.gene64879:intron | 35.0% | |
| GATATTGTTCAAGACACCTT+AGG | + | chr5.3:13967454-13967473 | MS.gene64879:CDS | 35.0% | |
| GATCTAGCTGAATACCATAA+AGG | + | chr5.3:13968912-13968931 | MS.gene64879:intron | 35.0% | |
| GTAGGAAATGAGCCATTATT+TGG | + | chr5.3:13968751-13968770 | MS.gene64879:intron | 35.0% | |
| GTTCTGTTCAACGATTATTG+TGG | + | chr5.3:13968470-13968489 | MS.gene64879:intron | 35.0% | |
| GTTGATCTTCATGTTTGAAG+GGG | + | chr5.3:13970123-13970142 | MS.gene64879:intron | 35.0% | |
| TAATCCTTTGCCACAGAATA+TGG | + | chr5.3:13971302-13971321 | MS.gene64879:intron | 35.0% | |
| TAGCACTACAACAGTTACAT+AGG | + | chr5.3:13969451-13969470 | MS.gene64879:intron | 35.0% | |
| TATTCAATGAATCTCTGCAG+TGG | + | chr5.3:13970370-13970389 | MS.gene64879:intron | 35.0% | |
| TCTAATGAGTTTAGGTGTGT+TGG | + | chr5.3:13969259-13969278 | MS.gene64879:intron | 35.0% | |
| TCTGCGGTATAACATATGTT+AGG | + | chr5.3:13969529-13969548 | MS.gene64879:intron | 35.0% | |
| TGAAGGTTATGCTATAGACT+GGG | + | chr5.3:13969962-13969981 | MS.gene64879:CDS | 35.0% | |
| TGTCTCATGATTCAACTTAG+AGG | + | chr5.3:13967570-13967589 | MS.gene64879:intron | 35.0% | |
| TTACGTAAGCTGATTATCAG+AGG | - | chr5.3:13971164-13971183 | None:intergenic | 35.0% | |
| TTACTGTTGCACCATTTGAT+TGG | - | chr5.3:13967612-13967631 | None:intergenic | 35.0% | |
| ! | ATGACAAAACTAAAGCACCA+TGG | - | chr5.3:13970725-13970744 | None:intergenic | 35.0% |
| ! | GAAAAGTGGATTCAATTACC+TGG | - | chr5.3:13971435-13971454 | None:intergenic | 35.0% |
| ! | GATGATAGTGAAGATGAAGA+AGG | + | chr5.3:13967992-13968011 | MS.gene64879:CDS | 35.0% |
| ! | GGTACAGAAAGAAAAGTACA+AGG | - | chr5.3:13970861-13970880 | None:intergenic | 35.0% |
| ! | GTGAACACCTCTAATTTTTG+TGG | + | chr5.3:13967158-13967177 | MS.gene64879:intron | 35.0% |
| ! | TCATGATCTCAGATTGGTTA+AGG | + | chr5.3:13970669-13970688 | MS.gene64879:CDS | 35.0% |
| ! | TCTCTTCACGCTTTTCATAT+TGG | + | chr5.3:13967326-13967345 | MS.gene64879:CDS | 35.0% |
| ! | TTCACGCTTTTCATATTGGA+TGG | + | chr5.3:13967330-13967349 | MS.gene64879:CDS | 35.0% |
| !! | AGTTATTTCTATTGGGTTGG+AGG | + | chr5.3:13968870-13968889 | MS.gene64879:intron | 35.0% |
| !! | CCAAGTTATTTCTATTGGGT+TGG | + | chr5.3:13968867-13968886 | MS.gene64879:intron | 35.0% |
| !! | GTTATTTCTATTGGGTTGGA+GGG | + | chr5.3:13968871-13968890 | MS.gene64879:intron | 35.0% |
| !! | TAAAGGCACCGATAAATTGT+TGG | + | chr5.3:13970615-13970634 | MS.gene64879:CDS | 35.0% |
| !!! | AGTAGAACCTTGTTTTCTTC+TGG | + | chr5.3:13970268-13970287 | MS.gene64879:intron | 35.0% |
| AAAAGCCTTCCTTCAACATG+AGG | - | chr5.3:13969990-13970009 | None:intergenic | 40.0% | |
| AAAGGCTTCACGTTGGAAAT+AGG | + | chr5.3:13968930-13968949 | MS.gene64879:intron | 40.0% | |
| AACTCCCTTTACTGGACATA+CGG | + | chr5.3:13970207-13970226 | MS.gene64879:CDS | 40.0% | |
| AAGGCTTCACGTTGGAAATA+GGG | + | chr5.3:13968931-13968950 | MS.gene64879:intron | 40.0% | |
| AATACCCTAAAGAACTGCAC+TGG | + | chr5.3:13971630-13971649 | MS.gene64879:CDS | 40.0% | |
| ACAAAGGCAAAATAATCGGC+GGG | - | chr5.3:13971003-13971022 | None:intergenic | 40.0% | |
| ACATCGCCAAAAAAAGACCA+AGG | + | chr5.3:13967089-13967108 | MS.gene64879:CDS | 40.0% | |
| ACCGATAAATTGTTGGCATC+TGG | + | chr5.3:13970622-13970641 | MS.gene64879:CDS | 40.0% | |
| AGGATCATGAATCAGACCAT+GGG | - | chr5.3:13969490-13969509 | None:intergenic | 40.0% | |
| AGGGGGAGGATACTATTAAA+AGG | + | chr5.3:13968950-13968969 | MS.gene64879:intron | 40.0% | |
| ATACCATAAAGGCTTCACGT+TGG | + | chr5.3:13968923-13968942 | MS.gene64879:intron | 40.0% | |
| ATCCAATCACATCCATTGAG+TGG | + | chr5.3:13971104-13971123 | MS.gene64879:CDS | 40.0% | |
| ATGGGACCTATCTGTAGAAA+GGG | + | chr5.3:13971321-13971340 | MS.gene64879:CDS | 40.0% | |
| ATTGACCAAACTCCCTTTAC+TGG | + | chr5.3:13970199-13970218 | MS.gene64879:CDS | 40.0% | |
| CAATATGGGATACTCGTTGT+AGG | + | chr5.3:13970445-13970464 | MS.gene64879:CDS | 40.0% | |
| CTATCATTCCAGGAATCTGT+CGG | - | chr5.3:13971658-13971677 | None:intergenic | 40.0% | |
| CTCATGAAGGTTGTATCAAC+CGG | + | chr5.3:13968160-13968179 | MS.gene64879:CDS | 40.0% | |
| CTGATGTGAATGTCTTGTCA+TGG | + | chr5.3:13970502-13970521 | MS.gene64879:CDS | 40.0% | |
| GTTAGCTACATGATTGTGGT+TGG | + | chr5.3:13969318-13969337 | MS.gene64879:intron | 40.0% | |
| TACATGATTGTGGTTGGACA+TGG | + | chr5.3:13969324-13969343 | MS.gene64879:intron | 40.0% | |
| TAGAACCCAAGGACAAGTAA+GGG | + | chr5.3:13971372-13971391 | MS.gene64879:CDS | 40.0% | |
| TATGGGACCTATCTGTAGAA+AGG | + | chr5.3:13971320-13971339 | MS.gene64879:CDS | 40.0% | |
| TATGTCCAGTAAAGGGAGTT+TGG | - | chr5.3:13970207-13970226 | None:intergenic | 40.0% | |
| TCCCCATGATGCACATATAT+GGG | - | chr5.3:13968208-13968227 | None:intergenic | 40.0% | |
| TCTGATTCATGATCCTGCAT+TGG | + | chr5.3:13969494-13969513 | MS.gene64879:intron | 40.0% | |
| TGAAGAGAGTTGTAAGCAGA+AGG | - | chr5.3:13967314-13967333 | None:intergenic | 40.0% | |
| TGAATGTCTTGTCATGGAAC+AGG | + | chr5.3:13970508-13970527 | MS.gene64879:CDS | 40.0% | |
| TGGATGTGATTGGATGCTTA+TGG | - | chr5.3:13971099-13971118 | None:intergenic | 40.0% | |
| TTAGCAGCAGCTAAGGTTAA+AGG | + | chr5.3:13969709-13969728 | MS.gene64879:intron | 40.0% | |
| TTCCACTCAATGGATGTGAT+TGG | - | chr5.3:13971109-13971128 | None:intergenic | 40.0% | |
| TTTCCAACGTGAAGCCTTTA+TGG | - | chr5.3:13968929-13968948 | None:intergenic | 40.0% | |
| ! | CTCTTTTCAGCAAACTGTAC+TGG | + | chr5.3:13968979-13968998 | MS.gene64879:intron | 40.0% |
| ! | GAATGTTGTGATTTTGCCAC+TGG | + | chr5.3:13969015-13969034 | MS.gene64879:intron | 40.0% |
| ! | GTTGAAGGAAGGCTTTTATC+TGG | + | chr5.3:13969993-13970012 | MS.gene64879:CDS | 40.0% |
| ! | TTTCAGCAAACTGTACTGGT+TGG | + | chr5.3:13968983-13969002 | MS.gene64879:intron | 40.0% |
| !! | AAGATGAAGAAGGTGTTGTC+GGG | + | chr5.3:13968002-13968021 | MS.gene64879:CDS | 40.0% |
| !! | ATATTGGATGGCCTTGTCTT+AGG | + | chr5.3:13967342-13967361 | MS.gene64879:CDS | 40.0% |
| !! | GAAGATGAAGAAGGTGTTGT+CGG | + | chr5.3:13968001-13968020 | MS.gene64879:CDS | 40.0% |
| !!! | CGTTTGGGATTTGTTTTGGT+TGG | + | chr5.3:13969201-13969220 | MS.gene64879:intron | 40.0% |
| AAGCAGCGAAAGAAGAAGCT+TGG | - | chr5.3:13971138-13971157 | None:intergenic | 45.0% | |
| ACACAGTGTACTTCATGGCA+GGG | + | chr5.3:13967500-13967519 | MS.gene64879:CDS | 45.0% | |
| ACTACCCGTATGTCCAGTAA+AGG | - | chr5.3:13970215-13970234 | None:intergenic | 45.0% | |
| ACTCCCTTTACTGGACATAC+GGG | + | chr5.3:13970208-13970227 | MS.gene64879:CDS | 45.0% | |
| AGAGTTTGGAAGTGGAACTG+AGG | + | chr5.3:13969175-13969194 | MS.gene64879:intron | 45.0% | |
| AGCCCCATATATGTGCATCA+TGG | + | chr5.3:13968202-13968221 | MS.gene64879:CDS | 45.0% | |
| AGGCTTCACGTTGGAAATAG+GGG | + | chr5.3:13968932-13968951 | MS.gene64879:intron | 45.0% | |
| ATAGTACCAATGCTGCACAC+AGG | - | chr5.3:13968576-13968595 | None:intergenic | 45.0% | |
| ATAGTATCCACTGCAGCAGA+TGG | + | chr5.3:13971674-13971693 | MS.gene64879:CDS | 45.0% | |
| CAGATAGGTCCCATATTCTG+TGG | - | chr5.3:13971315-13971334 | None:intergenic | 45.0% | |
| CAGGATCATGAATCAGACCA+TGG | - | chr5.3:13969491-13969510 | None:intergenic | 45.0% | |
| CATGAATCAGACCATGGGAT+CGG | - | chr5.3:13969485-13969504 | None:intergenic | 45.0% | |
| CCCCATATATGTGCATCATG+GGG | + | chr5.3:13968204-13968223 | MS.gene64879:CDS | 45.0% | |
| CCCCATGATGCACATATATG+GGG | - | chr5.3:13968207-13968226 | None:intergenic | 45.0% | |
| CCTGAACTACATCAACTCCT+TGG | - | chr5.3:13969914-13969933 | None:intergenic | 45.0% | |
| CTACCCGTATGTCCAGTAAA+GGG | - | chr5.3:13970214-13970233 | None:intergenic | 45.0% | |
| CTAGAACCCAAGGACAAGTA+AGG | + | chr5.3:13971371-13971390 | MS.gene64879:CDS | 45.0% | |
| CTCCCCATGATGCACATATA+TGG | - | chr5.3:13968209-13968228 | None:intergenic | 45.0% | |
| GAGTCACCAGTTTCATGGTT+AGG | - | chr5.3:13967941-13967960 | None:intergenic | 45.0% | |
| GAGTTTGGAAGTGGAACTGA+GGG | + | chr5.3:13969176-13969195 | MS.gene64879:intron | 45.0% | |
| GCAGTGGATACTATCATTCC+AGG | - | chr5.3:13971668-13971687 | None:intergenic | 45.0% | |
| GCCCCATATATGTGCATCAT+GGG | + | chr5.3:13968203-13968222 | MS.gene64879:CDS | 45.0% | |
| TATGGGATACTCGTTGTAGG+AGG | + | chr5.3:13970448-13970467 | MS.gene64879:CDS | 45.0% | |
| TCCACACACAGTGTACTTCA+TGG | + | chr5.3:13967495-13967514 | MS.gene64879:CDS | 45.0% | |
| TGAAACTGGTGACTCTGCAA+TGG | + | chr5.3:13967946-13967965 | MS.gene64879:CDS | 45.0% | |
| TGACTCTGCAATGGATAGTG+AGG | + | chr5.3:13967955-13967974 | MS.gene64879:CDS | 45.0% | |
| TTCCATGTTGCAGCAGATGT+AGG | - | chr5.3:13970178-13970197 | None:intergenic | 45.0% | |
| TTGCAGAGTCACCAGTTTCA+TGG | - | chr5.3:13967946-13967965 | None:intergenic | 45.0% | |
| TTTCCCTTCTGACATGTCCA+TGG | + | chr5.3:13970705-13970724 | MS.gene64879:intron | 45.0% | |
| TTTGTTCGCACCTACAGTTG+CGG | + | chr5.3:13968130-13968149 | MS.gene64879:intron | 45.0% | |
| ! | GCACATATATGGGGCTTTTG+TGG | - | chr5.3:13968198-13968217 | None:intergenic | 45.0% |
| ! | TATATGGGGCTTTTGTGGCA+TGG | - | chr5.3:13968193-13968212 | None:intergenic | 45.0% |
| ! | TGGCATCTGGTAGTGATGAT+GGG | + | chr5.3:13970635-13970654 | MS.gene64879:CDS | 45.0% |
| ! | TTGGCATCTGGTAGTGATGA+TGG | + | chr5.3:13970634-13970653 | MS.gene64879:CDS | 45.0% |
| !! | AGATGAAGAAGGTGTTGTCG+GGG | + | chr5.3:13968003-13968022 | MS.gene64879:CDS | 45.0% |
| !! | CCAAGGAGTTGATGTAGTTC+AGG | + | chr5.3:13969911-13969930 | MS.gene64879:CDS | 45.0% |
| !! | GGCTCGTTTGGGATTTGTTT+TGG | + | chr5.3:13969197-13969216 | MS.gene64879:intron | 45.0% |
| AAGAAGGTTTCTCAGCCTGG+GGG | - | chr5.3:13967859-13967878 | None:intergenic | 50.0% | |
| AGCACCATGGACATGTCAGA+AGG | - | chr5.3:13970712-13970731 | None:intergenic | 50.0% | |
| AGCCTACATCTGCTGCAACA+TGG | + | chr5.3:13970173-13970192 | MS.gene64879:CDS | 50.0% | |
| AGGAGCCCTTACTTGTCCTT+GGG | - | chr5.3:13971380-13971399 | None:intergenic | 50.0% | |
| AGGTCAATGTTCCGATCCCA+TGG | + | chr5.3:13969471-13969490 | MS.gene64879:intron | 50.0% | |
| CAAGAAGGTTTCTCAGCCTG+GGG | - | chr5.3:13967860-13967879 | None:intergenic | 50.0% | |
| CACACAGTGTACTTCATGGC+AGG | + | chr5.3:13967499-13967518 | MS.gene64879:CDS | 50.0% | |
| CACACTTTAACCGGAAGCTG+TGG | - | chr5.3:13967242-13967261 | None:intergenic | 50.0% | |
| CACAGCTTCCGGTTAAAGTG+TGG | + | chr5.3:13967240-13967259 | MS.gene64879:CDS | 50.0% | |
| CACTTCGTTTCTTCGAGTCC+CGG | - | chr5.3:13967202-13967221 | None:intergenic | 50.0% | |
| CCAAGAAGGTTTCTCAGCCT+GGG | - | chr5.3:13967861-13967880 | None:intergenic | 50.0% | |
| CCAGGTTGCCACACTTTAAC+CGG | - | chr5.3:13967251-13967270 | None:intergenic | 50.0% | |
| CCAGTTTCATGGTTAGGCAC+CGG | - | chr5.3:13967935-13967954 | None:intergenic | 50.0% | |
| CCTATCTGTAGAAAGGGACG+AGG | + | chr5.3:13971327-13971346 | MS.gene64879:CDS | 50.0% | |
| CCTCGTCCCTTTCTACAGAT+AGG | - | chr5.3:13971330-13971349 | None:intergenic | 50.0% | |
| CTAGCAGAGACAGAAACGGA+AGG | + | chr5.3:13969885-13969904 | MS.gene64879:CDS | 50.0% | |
| GACTGGGATCCTCATGTTGA+AGG | + | chr5.3:13969978-13969997 | MS.gene64879:CDS | 50.0% | |
| GAGGAAGTTGCCTGCAAAGT+AGG | - | chr5.3:13968031-13968050 | None:intergenic | 50.0% | |
| GCACCATGGACATGTCAGAA+GGG | - | chr5.3:13970711-13970730 | None:intergenic | 50.0% | |
| GCCATGAAGTACACTGTGTG+TGG | - | chr5.3:13967499-13967518 | None:intergenic | 50.0% | |
| GGACATGAGCTCTCATCTCA+AGG | + | chr5.3:13969860-13969879 | MS.gene64879:CDS | 50.0% | |
| GGCTTCACGTTGGAAATAGG+GGG | + | chr5.3:13968933-13968952 | MS.gene64879:intron | 50.0% | |
| GGGATCCTCATGTTGAAGGA+AGG | + | chr5.3:13969982-13970001 | MS.gene64879:CDS | 50.0% | |
| GGTCCCATATTCTGTGGCAA+AGG | - | chr5.3:13971309-13971328 | None:intergenic | 50.0% | |
| GGTGCCAGTGCAGTTCTTTA+GGG | - | chr5.3:13971637-13971656 | None:intergenic | 50.0% | |
| GTTGAATCCATCTGCTGCAG+TGG | - | chr5.3:13971684-13971703 | None:intergenic | 50.0% | |
| TAAAGTGTGGCAACCTGGTG+TGG | + | chr5.3:13967253-13967272 | MS.gene64879:CDS | 50.0% | |
| TAGTGAGGACAGTGACAGTG+AGG | + | chr5.3:13967970-13967989 | MS.gene64879:CDS | 50.0% | |
| TCCAAGAAGGTTTCTCAGCC+TGG | - | chr5.3:13967862-13967881 | None:intergenic | 50.0% | |
| TCTTCCAACTTGTCCACACC+AGG | - | chr5.3:13967269-13967288 | None:intergenic | 50.0% | |
| TGTAGAAAGGGACGAGGAAG+AGG | + | chr5.3:13971333-13971352 | MS.gene64879:CDS | 50.0% | |
| TTCACGTTGGAAATAGGGGG+AGG | + | chr5.3:13968936-13968955 | MS.gene64879:intron | 50.0% | |
| TTCTTCAGTGCCACAGCTTC+CGG | + | chr5.3:13967229-13967248 | MS.gene64879:CDS | 50.0% | |
| TTGCGGAGGGTAACTCATGA+AGG | + | chr5.3:13968147-13968166 | MS.gene64879:CDS | 50.0% | |
| TTGGCGTGGATTCCACTCAA+TGG | - | chr5.3:13971119-13971138 | None:intergenic | 50.0% | |
| TTTGTGGCATGGAGCGTATC+CGG | - | chr5.3:13968182-13968201 | None:intergenic | 50.0% | |
| ! | GGCTCTAGCAGAGACAGAAA+CGG | + | chr5.3:13969881-13969900 | MS.gene64879:CDS | 50.0% |
| !! | ACAGAAACGGAAGGTGTCCA+AGG | + | chr5.3:13969894-13969913 | MS.gene64879:CDS | 50.0% |
| !! | GATGAAGAAGGTGTTGTCGG+GGG | + | chr5.3:13968004-13968023 | MS.gene64879:CDS | 50.0% |
| AGAAAGGGACGAGGAAGAGG+AGG | + | chr5.3:13971336-13971355 | MS.gene64879:CDS | 55.0% | |
| AGAAGGTTTCTCAGCCTGGG+GGG | - | chr5.3:13967858-13967877 | None:intergenic | 55.0% | |
| AGTGGAACTGAGGGCTCGTT+TGG | + | chr5.3:13969185-13969204 | MS.gene64879:intron | 55.0% | |
| AGTTGGGGAGGCAGATCTTC+AGG | - | chr5.3:13971400-13971419 | None:intergenic | 55.0% | |
| CAGGAGCCCTTACTTGTCCT+TGG | - | chr5.3:13971381-13971400 | None:intergenic | 55.0% | |
| CCCAGGCTGAGAAACCTTCT+TGG | + | chr5.3:13967858-13967877 | MS.gene64879:intron | 55.0% | |
| CCGGTGCCTAACCATGAAAC+TGG | + | chr5.3:13967932-13967951 | MS.gene64879:CDS | 55.0% | |
| CCGGTTAAAGTGTGGCAACC+TGG | + | chr5.3:13967248-13967267 | MS.gene64879:CDS | 55.0% | |
| GAGTTACCCTCCGCAACTGT+AGG | - | chr5.3:13968143-13968162 | None:intergenic | 55.0% | |
| GCAACCTGGTGTGGACAAGT+TGG | + | chr5.3:13967262-13967281 | MS.gene64879:CDS | 55.0% | |
| GCGAAAGAAGAAGCTTGGCG+TGG | - | chr5.3:13971133-13971152 | None:intergenic | 55.0% | |
| GTACTTCATGGCAGGGACAC+AGG | + | chr5.3:13967507-13967526 | MS.gene64879:CDS | 55.0% | |
| GTGGAACTGAGGGCTCGTTT+GGG | + | chr5.3:13969186-13969205 | MS.gene64879:intron | 55.0% | |
| GTGTGACCTGTGTGCAGCAT+TGG | + | chr5.3:13968567-13968586 | MS.gene64879:intron | 55.0% | |
| TGTGCATCATGGGGAGACTC+TGG | + | chr5.3:13968213-13968232 | MS.gene64879:CDS | 55.0% | |
| TTCGCACCTACAGTTGCGGA+GGG | + | chr5.3:13968134-13968153 | MS.gene64879:intron | 55.0% | |
| ! | CGGTGCCAGTGCAGTTCTTT+AGG | - | chr5.3:13971638-13971657 | None:intergenic | 55.0% |
| ! | TTCTGGGAAGACACGTGAGC+CGG | + | chr5.3:13967913-13967932 | MS.gene64879:CDS | 55.0% |
| GGGAGACTCTGGTCATGTGC+AGG | + | chr5.3:13968224-13968243 | MS.gene64879:CDS | 60.0% | |
| GTTCGCACCTACAGTTGCGG+AGG | + | chr5.3:13968133-13968152 | MS.gene64879:intron | 60.0% | |
| TGATGTTGCATGTGCCCCCC+AGG | + | chr5.3:13967841-13967860 | MS.gene64879:intron | 60.0% | |
| TGTCGGGGGTCCTACTTTGC+AGG | + | chr5.3:13968018-13968037 | MS.gene64879:CDS | 60.0% | |
| !! | CACTGGCACCGACAGATTCC+TGG | + | chr5.3:13971647-13971666 | MS.gene64879:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 13967072 | 13971727 | 13967072 | ID=MS.gene64879 |
| chr5.3 | mRNA | 13967072 | 13971727 | 13967072 | ID=MS.gene64879.t1;Parent=MS.gene64879 |
| chr5.3 | exon | 13967072 | 13967110 | 13967072 | ID=MS.gene64879.t1.exon1;Parent=MS.gene64879.t1 |
| chr5.3 | CDS | 13967072 | 13967110 | 13967072 | ID=cds.MS.gene64879.t1;Parent=MS.gene64879.t1 |
| chr5.3 | exon | 13967212 | 13967363 | 13967212 | ID=MS.gene64879.t1.exon2;Parent=MS.gene64879.t1 |
| chr5.3 | CDS | 13967212 | 13967363 | 13967212 | ID=cds.MS.gene64879.t1;Parent=MS.gene64879.t1 |
| chr5.3 | exon | 13967450 | 13967528 | 13967450 | ID=MS.gene64879.t1.exon3;Parent=MS.gene64879.t1 |
| chr5.3 | CDS | 13967450 | 13967528 | 13967450 | ID=cds.MS.gene64879.t1;Parent=MS.gene64879.t1 |
| chr5.3 | exon | 13967863 | 13968039 | 13967863 | ID=MS.gene64879.t1.exon4;Parent=MS.gene64879.t1 |
| chr5.3 | CDS | 13967863 | 13968039 | 13967863 | ID=cds.MS.gene64879.t1;Parent=MS.gene64879.t1 |
| chr5.3 | exon | 13968147 | 13968245 | 13968147 | ID=MS.gene64879.t1.exon5;Parent=MS.gene64879.t1 |
| chr5.3 | CDS | 13968147 | 13968245 | 13968147 | ID=cds.MS.gene64879.t1;Parent=MS.gene64879.t1 |
| chr5.3 | exon | 13969855 | 13970014 | 13969855 | ID=MS.gene64879.t1.exon6;Parent=MS.gene64879.t1 |
| chr5.3 | CDS | 13969855 | 13970014 | 13969855 | ID=cds.MS.gene64879.t1;Parent=MS.gene64879.t1 |
| chr5.3 | exon | 13970143 | 13970249 | 13970143 | ID=MS.gene64879.t1.exon7;Parent=MS.gene64879.t1 |
| chr5.3 | CDS | 13970143 | 13970249 | 13970143 | ID=cds.MS.gene64879.t1;Parent=MS.gene64879.t1 |
| chr5.3 | exon | 13970390 | 13970529 | 13970390 | ID=MS.gene64879.t1.exon8;Parent=MS.gene64879.t1 |
| chr5.3 | CDS | 13970390 | 13970529 | 13970390 | ID=cds.MS.gene64879.t1;Parent=MS.gene64879.t1 |
| chr5.3 | exon | 13970612 | 13970690 | 13970612 | ID=MS.gene64879.t1.exon9;Parent=MS.gene64879.t1 |
| chr5.3 | CDS | 13970612 | 13970690 | 13970612 | ID=cds.MS.gene64879.t1;Parent=MS.gene64879.t1 |
| chr5.3 | exon | 13971067 | 13971179 | 13971067 | ID=MS.gene64879.t1.exon10;Parent=MS.gene64879.t1 |
| chr5.3 | CDS | 13971067 | 13971179 | 13971067 | ID=cds.MS.gene64879.t1;Parent=MS.gene64879.t1 |
| chr5.3 | exon | 13971318 | 13971435 | 13971318 | ID=MS.gene64879.t1.exon11;Parent=MS.gene64879.t1 |
| chr5.3 | CDS | 13971318 | 13971435 | 13971318 | ID=cds.MS.gene64879.t1;Parent=MS.gene64879.t1 |
| chr5.3 | exon | 13971623 | 13971727 | 13971623 | ID=MS.gene64879.t1.exon12;Parent=MS.gene64879.t1 |
| chr5.3 | CDS | 13971623 | 13971727 | 13971623 | ID=cds.MS.gene64879.t1;Parent=MS.gene64879.t1 |
| Gene Sequence |
| Protein sequence |
