Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene64895.t1 | XP_013453593.1 | 90.6 | 948 | 89 | 0 | 1 | 948 | 1 | 948 | 0.00E+00 | 1692.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene64895.t1 | Q84W41 | 57.5 | 910 | 373 | 5 | 5 | 913 | 3 | 899 | 0.0e+00 | 1076.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene64895.t1 | G7K195 | 90.6 | 948 | 89 | 0 | 1 | 948 | 33 | 980 | 0.0e+00 | 1692.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene053873 | MS.gene64895 | 0.814924 | 1.20E-51 | -1.69E-46 |
MS.gene054486 | MS.gene64895 | 0.823711 | 1.20E-53 | -1.69E-46 |
MS.gene055486 | MS.gene64895 | 0.81806 | 2.39E-52 | -1.69E-46 |
MS.gene05995 | MS.gene64895 | 0.807661 | 4.53E-50 | -1.69E-46 |
MS.gene060485 | MS.gene64895 | 0.807567 | 4.75E-50 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene64895 | MS.gene28682 | PPI |
MS.gene64895 | MS.gene052584 | PPI |
MS.gene64895 | MS.gene052582 | PPI |
MS.gene64895 | MS.gene32229 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene64895.t1 | MTR_5g024350 | 96.097 | 948 | 37 | 0 | 1 | 948 | 33 | 980 | 0.0 | 1861 |
MS.gene64895.t1 | MTR_5g024350 | 96.097 | 948 | 37 | 0 | 1 | 948 | 1 | 948 | 0.0 | 1857 |
MS.gene64895.t1 | MTR_8g073210 | 71.521 | 927 | 261 | 2 | 1 | 926 | 1 | 925 | 0.0 | 1397 |
MS.gene64895.t1 | MTR_3g115910 | 56.718 | 908 | 372 | 8 | 4 | 909 | 8 | 896 | 0.0 | 1065 |
MS.gene64895.t1 | MTR_3g115910 | 56.718 | 908 | 372 | 8 | 4 | 909 | 53 | 941 | 0.0 | 1065 |
MS.gene64895.t1 | MTR_8g073490 | 55.700 | 921 | 389 | 10 | 1 | 911 | 1 | 912 | 0.0 | 1028 |
MS.gene64895.t1 | MTR_8g073210 | 70.859 | 652 | 189 | 1 | 1 | 651 | 1 | 652 | 0.0 | 981 |
MS.gene64895.t1 | MTR_8g073210 | 71.136 | 634 | 182 | 1 | 1 | 633 | 1 | 634 | 0.0 | 960 |
MS.gene64895.t1 | MTR_2g088450 | 52.737 | 895 | 403 | 7 | 26 | 907 | 32 | 919 | 0.0 | 960 |
MS.gene64895.t1 | MTR_3g115910 | 58.483 | 778 | 309 | 5 | 4 | 779 | 8 | 773 | 0.0 | 939 |
MS.gene64895.t1 | MTR_2g088450 | 53.828 | 836 | 367 | 6 | 85 | 907 | 25 | 854 | 0.0 | 919 |
MS.gene64895.t1 | MTR_2g088450 | 54.172 | 827 | 360 | 6 | 94 | 907 | 1 | 821 | 0.0 | 915 |
MS.gene64895.t1 | MTR_2g088430 | 44.205 | 880 | 479 | 7 | 25 | 897 | 24 | 898 | 0.0 | 813 |
MS.gene64895.t1 | MTR_8g073210 | 70.425 | 541 | 159 | 1 | 1 | 540 | 1 | 541 | 0.0 | 810 |
MS.gene64895.t1 | MTR_2g088450 | 54.247 | 671 | 298 | 3 | 26 | 694 | 32 | 695 | 0.0 | 744 |
MS.gene64895.t1 | MTR_3g115910 | 54.091 | 660 | 285 | 6 | 4 | 661 | 53 | 696 | 0.0 | 733 |
MS.gene64895.t1 | MTR_3g115910 | 54.091 | 660 | 285 | 6 | 4 | 661 | 8 | 651 | 0.0 | 733 |
MS.gene64895.t1 | MTR_2g088450 | 51.935 | 620 | 289 | 3 | 26 | 643 | 32 | 644 | 0.0 | 666 |
MS.gene64895.t1 | MTR_2g088450 | 53.986 | 552 | 246 | 2 | 94 | 643 | 1 | 546 | 0.0 | 620 |
MS.gene64895.t1 | MTR_2g088450 | 53.102 | 548 | 249 | 2 | 94 | 639 | 1 | 542 | 0.0 | 603 |
MS.gene64895.t1 | MTR_3g105610 | 33.446 | 891 | 543 | 21 | 1 | 863 | 13 | 881 | 3.88e-150 | 470 |
MS.gene64895.t1 | MTR_3g105595 | 35.871 | 775 | 467 | 18 | 108 | 863 | 1 | 764 | 4.63e-147 | 458 |
MS.gene64895.t1 | MTR_4g087925 | 31.243 | 893 | 530 | 26 | 5 | 872 | 19 | 852 | 2.25e-117 | 381 |
MS.gene64895.t1 | MTR_2g015270 | 28.497 | 965 | 584 | 30 | 1 | 929 | 11 | 905 | 8.89e-104 | 347 |
MS.gene64895.t1 | MTR_2g015280 | 27.146 | 862 | 533 | 25 | 27 | 867 | 32 | 819 | 3.63e-86 | 297 |
MS.gene64895.t1 | MTR_2g015310 | 27.483 | 866 | 530 | 26 | 34 | 874 | 41 | 833 | 5.73e-85 | 293 |
MS.gene64895.t1 | MTR_2g015290 | 26.986 | 856 | 527 | 25 | 27 | 855 | 33 | 817 | 1.74e-81 | 284 |
MS.gene64895.t1 | MTR_5g059920 | 28.425 | 876 | 526 | 28 | 28 | 862 | 36 | 851 | 2.89e-81 | 283 |
MS.gene64895.t1 | MTR_0018s0240 | 28.302 | 795 | 454 | 25 | 100 | 862 | 49 | 759 | 5.41e-78 | 272 |
MS.gene64895.t1 | MTR_2g015260 | 27.696 | 751 | 449 | 22 | 208 | 943 | 32 | 703 | 2.48e-74 | 259 |
MS.gene64895.t1 | MTR_5g059900 | 27.736 | 804 | 482 | 25 | 94 | 862 | 3 | 742 | 2.84e-72 | 254 |
MS.gene64895.t1 | MTR_5g059920 | 29.020 | 796 | 468 | 28 | 28 | 789 | 36 | 768 | 3.55e-71 | 251 |
MS.gene64895.t1 | MTR_0018s0230 | 31.884 | 483 | 296 | 13 | 396 | 862 | 270 | 735 | 1.59e-64 | 233 |
MS.gene64895.t1 | MTR_0018s0230 | 33.095 | 420 | 255 | 11 | 396 | 807 | 270 | 671 | 4.79e-55 | 203 |
MS.gene64895.t1 | MTR_6g045087 | 32.000 | 400 | 250 | 10 | 472 | 851 | 40 | 437 | 7.01e-49 | 181 |
MS.gene64895.t1 | MTR_5g060330 | 26.208 | 538 | 319 | 19 | 99 | 606 | 10 | 499 | 9.60e-29 | 123 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene64895.t1 | AT3G51480 | 57.473 | 910 | 373 | 5 | 5 | 913 | 3 | 899 | 0.0 | 1110 |
MS.gene64895.t1 | AT3G51480 | 57.473 | 910 | 373 | 5 | 5 | 913 | 3 | 899 | 0.0 | 1110 |
MS.gene64895.t1 | AT1G42540 | 56.369 | 942 | 383 | 11 | 1 | 931 | 1 | 925 | 0.0 | 1078 |
MS.gene64895.t1 | AT1G42540 | 56.369 | 942 | 383 | 11 | 1 | 931 | 1 | 925 | 0.0 | 1078 |
MS.gene64895.t1 | AT1G42540 | 56.369 | 942 | 383 | 11 | 1 | 931 | 1 | 925 | 0.0 | 1078 |
MS.gene64895.t1 | AT3G51480 | 58.831 | 821 | 325 | 4 | 94 | 913 | 1 | 809 | 0.0 | 1027 |
MS.gene64895.t1 | AT4G35290 | 52.928 | 922 | 408 | 10 | 5 | 914 | 3 | 910 | 0.0 | 991 |
MS.gene64895.t1 | AT4G35290 | 52.928 | 922 | 408 | 10 | 5 | 914 | 3 | 910 | 0.0 | 991 |
MS.gene64895.t1 | AT4G35290 | 52.928 | 922 | 408 | 10 | 5 | 914 | 3 | 910 | 0.0 | 991 |
MS.gene64895.t1 | AT4G35290 | 52.928 | 922 | 408 | 10 | 5 | 914 | 3 | 910 | 0.0 | 991 |
MS.gene64895.t1 | AT4G35290 | 52.928 | 922 | 408 | 10 | 5 | 914 | 3 | 910 | 0.0 | 991 |
MS.gene64895.t1 | AT3G51480 | 58.194 | 775 | 311 | 4 | 5 | 779 | 3 | 764 | 0.0 | 960 |
MS.gene64895.t1 | AT2G17260 | 53.407 | 910 | 402 | 12 | 5 | 904 | 7 | 904 | 0.0 | 959 |
MS.gene64895.t1 | AT1G05200 | 52.327 | 881 | 402 | 6 | 28 | 897 | 57 | 930 | 0.0 | 936 |
MS.gene64895.t1 | AT1G05200 | 52.327 | 881 | 402 | 6 | 28 | 897 | 57 | 930 | 0.0 | 936 |
MS.gene64895.t1 | AT1G05200 | 52.327 | 881 | 402 | 6 | 28 | 897 | 57 | 930 | 0.0 | 936 |
MS.gene64895.t1 | AT2G32390 | 50.171 | 877 | 425 | 5 | 32 | 897 | 48 | 923 | 0.0 | 887 |
MS.gene64895.t1 | AT4G35290 | 54.534 | 783 | 334 | 8 | 5 | 779 | 3 | 771 | 0.0 | 865 |
MS.gene64895.t1 | AT2G32390 | 50.978 | 818 | 390 | 4 | 91 | 897 | 4 | 821 | 0.0 | 844 |
MS.gene64895.t1 | AT2G32390 | 50.796 | 817 | 391 | 4 | 92 | 897 | 49 | 865 | 0.0 | 842 |
MS.gene64895.t1 | AT1G05200 | 54.449 | 753 | 335 | 3 | 28 | 779 | 57 | 802 | 0.0 | 837 |
MS.gene64895.t1 | AT1G05200 | 54.449 | 753 | 335 | 3 | 28 | 779 | 57 | 802 | 0.0 | 837 |
MS.gene64895.t1 | AT2G32400 | 43.581 | 888 | 478 | 10 | 25 | 902 | 24 | 898 | 0.0 | 750 |
MS.gene64895.t1 | AT1G42540 | 55.470 | 649 | 272 | 8 | 1 | 643 | 1 | 638 | 0.0 | 736 |
MS.gene64895.t1 | AT2G32390 | 51.369 | 621 | 301 | 1 | 32 | 652 | 48 | 667 | 0.0 | 677 |
MS.gene64895.t1 | AT1G05200 | 52.496 | 621 | 288 | 2 | 28 | 648 | 57 | 670 | 0.0 | 671 |
MS.gene64895.t1 | AT2G32390 | 50.485 | 618 | 305 | 1 | 32 | 649 | 48 | 664 | 0.0 | 664 |
MS.gene64895.t1 | AT2G32390 | 50.485 | 618 | 305 | 1 | 32 | 649 | 48 | 664 | 0.0 | 664 |
MS.gene64895.t1 | AT1G05200 | 52.059 | 607 | 284 | 2 | 28 | 634 | 57 | 656 | 0.0 | 649 |
MS.gene64895.t1 | AT2G32390 | 49.917 | 603 | 301 | 1 | 32 | 634 | 48 | 649 | 0.0 | 639 |
MS.gene64895.t1 | AT5G27100 | 33.222 | 897 | 534 | 23 | 6 | 873 | 8 | 868 | 4.70e-153 | 475 |
MS.gene64895.t1 | AT5G11180 | 34.109 | 859 | 537 | 16 | 32 | 879 | 36 | 876 | 3.42e-152 | 474 |
MS.gene64895.t1 | AT2G29100 | 34.812 | 879 | 527 | 22 | 32 | 900 | 32 | 874 | 7.35e-151 | 470 |
MS.gene64895.t1 | AT2G29100 | 34.812 | 879 | 527 | 22 | 32 | 900 | 30 | 872 | 9.29e-151 | 470 |
MS.gene64895.t1 | AT5G11210 | 34.112 | 856 | 518 | 19 | 68 | 905 | 14 | 841 | 1.83e-150 | 467 |
MS.gene64895.t1 | AT5G11210 | 34.217 | 830 | 502 | 17 | 93 | 905 | 15 | 817 | 3.91e-150 | 465 |
MS.gene64895.t1 | AT5G11210 | 32.772 | 891 | 554 | 18 | 32 | 905 | 37 | 899 | 6.09e-150 | 467 |
MS.gene64895.t1 | AT2G29110 | 35.103 | 829 | 504 | 16 | 32 | 852 | 33 | 835 | 1.81e-149 | 467 |
MS.gene64895.t1 | AT2G29110 | 35.103 | 829 | 504 | 16 | 32 | 852 | 34 | 836 | 2.05e-149 | 467 |
MS.gene64895.t1 | AT2G29120 | 32.751 | 916 | 558 | 24 | 32 | 933 | 39 | 910 | 9.44e-149 | 465 |
MS.gene64895.t1 | AT2G24720 | 34.837 | 798 | 481 | 17 | 32 | 815 | 32 | 804 | 4.02e-147 | 460 |
MS.gene64895.t1 | AT4G31710 | 34.022 | 823 | 472 | 21 | 30 | 817 | 7 | 793 | 1.19e-141 | 445 |
MS.gene64895.t1 | AT4G31710 | 33.496 | 821 | 472 | 20 | 30 | 817 | 30 | 809 | 3.52e-139 | 439 |
MS.gene64895.t1 | AT5G11210 | 36.261 | 706 | 408 | 15 | 90 | 779 | 20 | 699 | 6.83e-139 | 432 |
MS.gene64895.t1 | AT5G11210 | 34.293 | 764 | 459 | 16 | 32 | 779 | 37 | 773 | 3.23e-138 | 433 |
MS.gene64895.t1 | AT5G11210 | 34.293 | 764 | 459 | 16 | 32 | 779 | 37 | 773 | 3.23e-138 | 433 |
MS.gene64895.t1 | AT5G11210 | 36.131 | 703 | 407 | 15 | 93 | 779 | 15 | 691 | 3.69e-138 | 430 |
MS.gene64895.t1 | AT5G11210 | 34.293 | 764 | 459 | 16 | 32 | 779 | 37 | 773 | 5.88e-138 | 432 |
MS.gene64895.t1 | AT5G11210 | 36.131 | 703 | 407 | 15 | 93 | 779 | 15 | 691 | 6.42e-138 | 429 |
MS.gene64895.t1 | AT5G11210 | 36.131 | 703 | 407 | 15 | 93 | 779 | 15 | 691 | 6.42e-138 | 429 |
MS.gene64895.t1 | AT2G24710 | 32.089 | 857 | 543 | 17 | 43 | 882 | 42 | 876 | 2.70e-137 | 433 |
MS.gene64895.t1 | AT2G24710 | 32.089 | 857 | 543 | 17 | 43 | 882 | 66 | 900 | 3.79e-137 | 434 |
MS.gene64895.t1 | AT2G24710 | 33.244 | 746 | 470 | 13 | 43 | 779 | 66 | 792 | 1.82e-129 | 410 |
MS.gene64895.t1 | AT5G11180 | 31.002 | 858 | 504 | 18 | 32 | 879 | 36 | 815 | 1.29e-116 | 379 |
MS.gene64895.t1 | AT3G07520 | 27.972 | 858 | 530 | 23 | 32 | 864 | 46 | 840 | 4.94e-94 | 317 |
MS.gene64895.t1 | AT5G48400 | 28.402 | 845 | 519 | 24 | 32 | 859 | 40 | 815 | 1.99e-91 | 310 |
MS.gene64895.t1 | AT5G48410 | 27.509 | 847 | 539 | 23 | 32 | 869 | 42 | 822 | 1.71e-88 | 301 |
MS.gene64895.t1 | AT5G48400 | 28.889 | 765 | 460 | 23 | 32 | 779 | 40 | 737 | 2.24e-85 | 290 |
MS.gene64895.t1 | AT5G48410 | 28.269 | 757 | 470 | 22 | 32 | 779 | 42 | 734 | 8.96e-84 | 286 |
MS.gene64895.t1 | AT3G04110 | 26.268 | 887 | 547 | 24 | 6 | 870 | 4 | 805 | 1.13e-80 | 279 |
MS.gene64895.t1 | AT5G48410 | 26.196 | 836 | 515 | 23 | 32 | 858 | 42 | 784 | 1.00e-74 | 263 |
MS.gene64895.t1 | AT3G04110 | 28.198 | 688 | 425 | 18 | 6 | 683 | 4 | 632 | 7.77e-74 | 259 |
MS.gene64895.t1 | AT5G48410 | 26.077 | 836 | 512 | 24 | 32 | 858 | 42 | 780 | 1.49e-71 | 254 |
MS.gene64895.t1 | AT5G11210 | 34.694 | 392 | 242 | 7 | 522 | 905 | 6 | 391 | 2.91e-68 | 234 |
MS.gene64895.t1 | AT3G04110 | 24.803 | 887 | 532 | 24 | 6 | 870 | 4 | 777 | 1.01e-67 | 242 |
Find 198 sgRNAs with CRISPR-Local
Find 284 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGTTTGGAATGAATTGTTTC+TGG | 0.166017 | 5.3:-14156525 | None:intergenic |
TAAGCTTTCAATGCCTTTAA+TGG | 0.174089 | 5.3:-14157899 | None:intergenic |
TGGAACTGTAGTTTGGATTT+TGG | 0.188541 | 5.3:+14157138 | MS.gene64895:CDS |
CTGAGCATCATAATCTTTAT+TGG | 0.204930 | 5.3:-14158813 | None:intergenic |
TCGCAACACTAAACACTTTC+GGG | 0.205231 | 5.3:-14155942 | None:intergenic |
TACAAATCCCCAGCCGTTTC+TGG | 0.207905 | 5.3:-14158160 | None:intergenic |
AACCACATCCTTGGTGTAAA+TGG | 0.226841 | 5.3:-14157088 | None:intergenic |
GGCTTCTGAGCTGTGTTTCC+AGG | 0.230286 | 5.3:-14156594 | None:intergenic |
TTGGTCTTGCCGAGAATATT+TGG | 0.235404 | 5.3:-14155129 | None:intergenic |
GGCATTGAAAGCTTAGTAAT+TGG | 0.241024 | 5.3:+14157907 | MS.gene64895:CDS |
AAAGAAAGTTTGTTTCTAAA+TGG | 0.241296 | 5.3:+14156118 | MS.gene64895:CDS |
CCATATGGAATAAACTTATA+AGG | 0.245835 | 5.3:-14156780 | None:intergenic |
ACTTGTTCACTTCCACAATT+AGG | 0.259020 | 5.3:-14158863 | None:intergenic |
CCTTATAAGTTTATTCCATA+TGG | 0.280340 | 5.3:+14156780 | MS.gene64895:CDS |
GCTCCAATATTTACAATATC+AGG | 0.286846 | 5.3:-14155027 | None:intergenic |
AACTATTTAATCCAAGATAT+TGG | 0.289008 | 5.3:+14157970 | MS.gene64895:CDS |
CCTGAAGTTATTGCCTGGTT+TGG | 0.296388 | 5.3:-14156541 | None:intergenic |
CCGATCAAAGAGAAAGAAAA+TGG | 0.305618 | 5.3:+14158742 | MS.gene64895:CDS |
AAGCTTTCAATGCCTTTAAT+GGG | 0.306277 | 5.3:-14157898 | None:intergenic |
TTCGCAACACTAAACACTTT+CGG | 0.306463 | 5.3:-14155943 | None:intergenic |
ATCTCCTCTGCAGTTGCTTC+GGG | 0.310294 | 5.3:-14155847 | None:intergenic |
AGGCCTGATATTGTAAATAT+TGG | 0.310296 | 5.3:+14155024 | MS.gene64895:CDS |
CATCAACCATGGTTAAAGTT+TGG | 0.314545 | 5.3:+14154935 | None:intergenic |
AGACACAATGTGGCAATAAT+TGG | 0.321739 | 5.3:+14155523 | MS.gene64895:CDS |
CAAGTTGAAGCTCTCTCTTC+AGG | 0.325134 | 5.3:+14155149 | MS.gene64895:CDS |
TGAGATTCTGCAACGCTTCT+CGG | 0.332145 | 5.3:-14155806 | None:intergenic |
CATGGTTAAAGTTTGGCTAT+TGG | 0.335807 | 5.3:+14154942 | None:intergenic |
ATTGTCTACCATTTGCAAAA+TGG | 0.336897 | 5.3:-14158429 | None:intergenic |
AAATGCTATTCCATGTGATT+TGG | 0.338197 | 5.3:+14156571 | MS.gene64895:CDS |
TATCTCCTCTGCAGTTGCTT+CGG | 0.342196 | 5.3:-14155848 | None:intergenic |
CTAGTTTCTGTCTCCCTAAC+AGG | 0.342346 | 5.3:-14157046 | None:intergenic |
TATTAGTTGGAACTGTAGTT+TGG | 0.343379 | 5.3:+14157131 | MS.gene64895:CDS |
CAGCCATCTCCACGCATAAC+TGG | 0.344607 | 5.3:+14158833 | MS.gene64895:CDS |
ACGATCCTGAGCTAGGGTTT+TGG | 0.345127 | 5.3:-14158664 | None:intergenic |
ATCATCAATGTGGTTGGAAC+CGG | 0.347020 | 5.3:+14156450 | MS.gene64895:CDS |
TAGTGGTAGTAGCACCTGTT+AGG | 0.348845 | 5.3:+14157032 | MS.gene64895:CDS |
ACTAAACCAGACTCAATATA+TGG | 0.349812 | 5.3:-14157013 | None:intergenic |
GTCGTTGTGTGCTACTTATA+TGG | 0.356677 | 5.3:+14157797 | MS.gene64895:CDS |
TTTAGTGTTGCGAAGAATCT+TGG | 0.359196 | 5.3:+14155952 | MS.gene64895:CDS |
AGTAGTTCACGCCAACACTA+TGG | 0.359304 | 5.3:+14155915 | MS.gene64895:CDS |
AGTGCTCTAGCAGCTTCTTC+AGG | 0.368684 | 5.3:-14158027 | None:intergenic |
GTCTAATCACTCTGGATTAT+CGG | 0.372751 | 5.3:+14156494 | MS.gene64895:CDS |
AGCTCAGAAGCCTCGCGGTT+GGG | 0.374479 | 5.3:+14156605 | MS.gene64895:CDS |
TGGTGTAAATGGAGCCAAAA+AGG | 0.374511 | 5.3:-14157077 | None:intergenic |
GAAAATACAGTGAGCACATT+TGG | 0.377522 | 5.3:+14157775 | MS.gene64895:CDS |
GCAGACCTTGTTGACTACTA+TGG | 0.377656 | 5.3:+14155706 | MS.gene64895:CDS |
CTTGAGAAGGGTCCTCAAAA+TGG | 0.382532 | 5.3:+14158048 | MS.gene64895:CDS |
ACTCACGGAAATACCGATAA+TGG | 0.387132 | 5.3:+14156150 | MS.gene64895:CDS |
CTTATAAGTTTATTCCATAT+GGG | 0.389021 | 5.3:+14156781 | MS.gene64895:CDS |
CGGTGTAAATTTACTATTGT+AGG | 0.389253 | 5.3:+14158126 | MS.gene64895:CDS |
CAGGAAGATTCTAAATATAG+AGG | 0.393980 | 5.3:+14155168 | MS.gene64895:CDS |
CTTAATAGCCTTCCATTGTT+CGG | 0.398580 | 5.3:-14156633 | None:intergenic |
GGTCTCGGAGGATCGGTTAT+TGG | 0.400571 | 5.3:+14156472 | MS.gene64895:CDS |
AATGGAAGGCTATTAAGAAT+TGG | 0.401016 | 5.3:+14156639 | MS.gene64895:CDS |
GATAACAAATGTGCTAGTTC+AGG | 0.402634 | 5.3:+14155867 | MS.gene64895:CDS |
ACTCAGCCATATATTGAGTC+TGG | 0.404527 | 5.3:+14157007 | MS.gene64895:CDS |
CTCTCCCTGAAGTTATTGCC+TGG | 0.405725 | 5.3:-14156546 | None:intergenic |
CCAAACCAGGCAATAACTTC+AGG | 0.406252 | 5.3:+14156541 | MS.gene64895:CDS |
ATAATCTTTATTGGAGATGA+TGG | 0.413687 | 5.3:-14158804 | None:intergenic |
AGGAACGGAATTGGTGCATT+AGG | 0.414414 | 5.3:+14155772 | MS.gene64895:CDS |
ACTCATCAATACCAATATCT+TGG | 0.416136 | 5.3:-14157981 | None:intergenic |
TACAAAGGATTCATGACAAA+TGG | 0.421966 | 5.3:+14158459 | MS.gene64895:CDS |
CGGACAAGCTCGGTGTTACT+AGG | 0.423128 | 5.3:-14156819 | None:intergenic |
GGCTTCTCTTCAACTGTGGC+TGG | 0.425877 | 5.3:+14154985 | MS.gene64895:CDS |
CATATGGAATAAACTTATAA+GGG | 0.429868 | 5.3:-14156779 | None:intergenic |
TTTGCAAAATGGCAGTTGAT+AGG | 0.431842 | 5.3:-14158418 | None:intergenic |
TGGCGGTAACTAACGCCTAT+TGG | 0.432370 | 5.3:-14156666 | None:intergenic |
AATCATTTGAGAATGTGATT+TGG | 0.434174 | 5.3:-14156263 | None:intergenic |
GTAATTGGCAAAGAACCAAT+TGG | 0.435302 | 5.3:+14157922 | MS.gene64895:CDS |
GATCTGTGGATCAGCATGTT+TGG | 0.435879 | 5.3:+14158565 | MS.gene64895:CDS |
GTATACATTGATGATGATAA+TGG | 0.436911 | 5.3:+14155748 | MS.gene64895:CDS |
AACTTATAAGGGACAGCATA+AGG | 0.436939 | 5.3:-14156768 | None:intergenic |
TGACAAGTTCTGATAAAGAA+TGG | 0.437045 | 5.3:-14155655 | None:intergenic |
CTGGTACTTGCGAGACAAAT+TGG | 0.437291 | 5.3:-14156686 | None:intergenic |
CGCGTGCTGTCAACACTCCT+TGG | 0.443293 | 5.3:-14156071 | None:intergenic |
ATATATTGAGTCTGGTTTAG+TGG | 0.447740 | 5.3:+14157015 | MS.gene64895:CDS |
TGCGGTCGACGATGTAAATT+CGG | 0.449520 | 5.3:+14155104 | MS.gene64895:CDS |
AAGTCCAAGAGGGCCATTAT+CGG | 0.451799 | 5.3:-14156163 | None:intergenic |
ATTGCTAATGGTGAGTCTCT+TGG | 0.452500 | 5.3:-14158392 | None:intergenic |
CAATTTGTCTCGCAAGTACC+AGG | 0.453271 | 5.3:+14156687 | MS.gene64895:CDS |
AAGGGACAGCATAAGGCAAT+AGG | 0.454426 | 5.3:-14156761 | None:intergenic |
TCACAGCGATCTTTATCAAA+TGG | 0.455581 | 5.3:+14155675 | MS.gene64895:CDS |
GGAGACAGAAACTAGTGCTT+TGG | 0.456942 | 5.3:+14157054 | MS.gene64895:CDS |
AATCTTGGAATGATGGGAAC+TGG | 0.458661 | 5.3:+14155967 | MS.gene64895:CDS |
GAACCTTGAGTGTAACCAAT+TGG | 0.458763 | 5.3:-14157937 | None:intergenic |
CTGAAGAGAGAGCTTCAACT+TGG | 0.460309 | 5.3:-14155148 | None:intergenic |
TTGTTCTTACCATCCCCATA+TGG | 0.461876 | 5.3:-14156795 | None:intergenic |
TTAAGAATTGGAGTACCAAT+AGG | 0.462054 | 5.3:+14156651 | MS.gene64895:CDS |
AATACCGATAATGGCCCTCT+TGG | 0.465354 | 5.3:+14156159 | MS.gene64895:CDS |
AACCCTAGCTCAGGATCGTC+GGG | 0.470053 | 5.3:+14158668 | MS.gene64895:CDS |
ACTGGTTCTGTTCCTAATTG+TGG | 0.470541 | 5.3:+14158851 | MS.gene64895:CDS |
CTATTCCATGTGATTTGGCC+TGG | 0.474979 | 5.3:+14156576 | MS.gene64895:CDS |
ACGCGTGCACACACCAGATT+CGG | 0.475897 | 5.3:+14156089 | MS.gene64895:CDS |
CCAGGCACAGATACATTTCA+AGG | 0.476169 | 5.3:+14156705 | MS.gene64895:CDS |
CTTGTCCGTCTGATAACAAC+TGG | 0.476371 | 5.3:+14156834 | MS.gene64895:CDS |
ATGTGGTTGGAACCGGGTCT+CGG | 0.476531 | 5.3:+14156457 | MS.gene64895:CDS |
TGCAAGGAAGATGTCGATAT+AGG | 0.479803 | 5.3:-14158100 | None:intergenic |
GCAGTTGCTTCGGGTCTCAC+AGG | 0.488039 | 5.3:-14155838 | None:intergenic |
GACAAGTTCTGATAAAGAAT+GGG | 0.488714 | 5.3:-14155654 | None:intergenic |
GTAGTTCACGCCAACACTAT+GGG | 0.489805 | 5.3:+14155916 | MS.gene64895:CDS |
ACATTGATGATTTCATATGT+AGG | 0.491964 | 5.3:-14156438 | None:intergenic |
GGTCAAGAGTTCACCAGAAA+CGG | 0.492133 | 5.3:+14158147 | MS.gene64895:CDS |
TGATGGGAACTGGTTATGTA+TGG | 0.493409 | 5.3:+14155977 | MS.gene64895:CDS |
TGGGAATTGAAGTGAAGAAA+GGG | 0.497041 | 5.3:-14155635 | None:intergenic |
CTCCATTTACACCAAGGATG+TGG | 0.498261 | 5.3:+14157086 | MS.gene64895:CDS |
AGCTGCTAGAGCACTTGAGA+AGG | 0.498564 | 5.3:+14158035 | MS.gene64895:CDS |
AAAGCTGAAAATGAGATAAG+AGG | 0.499953 | 5.3:-14155604 | None:intergenic |
AAACCCGACGATCCTGAGCT+AGG | 0.500062 | 5.3:-14158671 | None:intergenic |
GATAATGGAAGGAACGGAAT+TGG | 0.500398 | 5.3:+14155763 | MS.gene64895:CDS |
TAAATTTACACCGGCTTGCA+AGG | 0.500407 | 5.3:-14158116 | None:intergenic |
AATTCGGATCCAAATATTCT+CGG | 0.501823 | 5.3:+14155120 | MS.gene64895:CDS |
ATCTCTTATAGAGGTAGTGA+GGG | 0.507274 | 5.3:+14158770 | MS.gene64895:CDS |
GTTGATAGGTCAATTGCTAA+TGG | 0.508345 | 5.3:-14158404 | None:intergenic |
AAGAGTTCACCAGAAACGGC+TGG | 0.511076 | 5.3:+14158151 | MS.gene64895:CDS |
AGTGGTAGTAGCACCTGTTA+GGG | 0.511309 | 5.3:+14157033 | MS.gene64895:CDS |
CCTTGAAATGTATCTGTGCC+TGG | 0.511367 | 5.3:-14156705 | None:intergenic |
CTCTACTAATATACTTCATA+CGG | 0.511636 | 5.3:+14158591 | MS.gene64895:CDS |
TATGAAATCATCAATGTGGT+TGG | 0.513116 | 5.3:+14156444 | MS.gene64895:CDS |
TGCGAAGAATCTTGGAATGA+TGG | 0.515559 | 5.3:+14155960 | MS.gene64895:CDS |
ATGGGAATTGAAGTGAAGAA+AGG | 0.515929 | 5.3:-14155636 | None:intergenic |
GTTAACATGACAGGTGTGAC+AGG | 0.520717 | 5.3:+14156378 | MS.gene64895:CDS |
GGAACCGGGTCTCGGAGGAT+CGG | 0.535259 | 5.3:+14156465 | MS.gene64895:CDS |
GGTTATTGGTCTAATCACTC+TGG | 0.537000 | 5.3:+14156486 | MS.gene64895:CDS |
GAACCAGTTATGCGTGGAGA+TGG | 0.540357 | 5.3:-14158836 | None:intergenic |
AGAGTTCACCAGAAACGGCT+GGG | 0.541125 | 5.3:+14158152 | MS.gene64895:CDS |
CAATGGCTTCTCTTCAACTG+TGG | 0.542234 | 5.3:+14154981 | MS.gene64895:CDS |
GAACCAATTGGTTACACTCA+AGG | 0.542568 | 5.3:+14157934 | MS.gene64895:CDS |
AACCCGACGATCCTGAGCTA+GGG | 0.542874 | 5.3:-14158670 | None:intergenic |
CCTGACCAAAACCCTAGCTC+AGG | 0.544007 | 5.3:+14158659 | MS.gene64895:CDS |
AAGTTTATTCCATATGGGGA+TGG | 0.544461 | 5.3:+14156786 | MS.gene64895:CDS |
CAGGAATTTGACGGTGCAGT+AGG | 0.544564 | 5.3:+14156941 | MS.gene64895:intron |
ATGGAGAGAATCTCTTATAG+AGG | 0.548030 | 5.3:+14158761 | MS.gene64895:CDS |
CAAACCAGGCAATAACTTCA+GGG | 0.551751 | 5.3:+14156542 | MS.gene64895:CDS |
AAACCCTAGCTCAGGATCGT+CGG | 0.552997 | 5.3:+14158667 | MS.gene64895:CDS |
GCTGCTAGAGCACTTGAGAA+GGG | 0.555149 | 5.3:+14158036 | MS.gene64895:CDS |
TGGGGACTGTATGTGATCTG+TGG | 0.555651 | 5.3:+14158551 | MS.gene64895:CDS |
AATCTCTTATAGAGGTAGTG+AGG | 0.556154 | 5.3:+14158769 | MS.gene64895:CDS |
CAGCTCAGAAGCCTCGCGGT+TGG | 0.558518 | 5.3:+14156604 | MS.gene64895:CDS |
ACCTTGTTGACTACTATGGA+TGG | 0.559074 | 5.3:+14155710 | MS.gene64895:CDS |
TTATAAGTTTATTCCATATG+GGG | 0.559101 | 5.3:+14156782 | MS.gene64895:CDS |
ATTTATGAAGTTAACATGAC+AGG | 0.559107 | 5.3:+14156369 | MS.gene64895:CDS |
TGAGCTGTTACAGAACTATG+AGG | 0.559881 | 5.3:-14155547 | None:intergenic |
TCATCAATGTGGTTGGAACC+GGG | 0.562645 | 5.3:+14156451 | MS.gene64895:CDS |
TCCATTGCCATCTGATGCAA+TGG | 0.562987 | 5.3:+14156041 | MS.gene64895:CDS |
GATGATGATAATGGAAGGAA+CGG | 0.567888 | 5.3:+14155757 | MS.gene64895:CDS |
AGCTTTCAATGCCTTTAATG+GGG | 0.571429 | 5.3:-14157897 | None:intergenic |
GCTGTGACAAACCACATCCT+TGG | 0.572660 | 5.3:-14157097 | None:intergenic |
TGTTTCCAGGCCAAATCACA+TGG | 0.575127 | 5.3:-14156581 | None:intergenic |
GCTCTAATGATTCTCTGCAA+TGG | 0.576486 | 5.3:+14154964 | MS.gene64895:CDS |
GATGCATTGAACATCTTCGA+TGG | 0.577411 | 5.3:+14156324 | MS.gene64895:CDS |
ATATTGGTATTGATGAGTCT+AGG | 0.579574 | 5.3:+14157986 | MS.gene64895:CDS |
TCGACATCTTCCTTGCAAGC+CGG | 0.580299 | 5.3:+14158106 | MS.gene64895:CDS |
AATAGCAGAAAGAAAAGCAG+TGG | 0.580483 | 5.3:-14156004 | None:intergenic |
ATATCATCCATTGCATCAGA+TGG | 0.582487 | 5.3:-14156048 | None:intergenic |
CTGGCATTCATAATACATCA+AGG | 0.584689 | 5.3:+14155004 | MS.gene64895:CDS |
GCGAAGAATCTTGGAATGAT+GGG | 0.585664 | 5.3:+14155961 | MS.gene64895:CDS |
CAATAGCCAAACTTTAACCA+TGG | 0.590621 | 5.3:-14154941 | None:intergenic |
AACAAATGTGCTAGTTCAGG+TGG | 0.591116 | 5.3:+14155870 | MS.gene64895:CDS |
TCCATTGCATCAGATGGCAA+TGG | 0.602552 | 5.3:-14156042 | None:intergenic |
AAATGGCAAAACTTGACTCA+CGG | 0.603058 | 5.3:+14156135 | MS.gene64895:CDS |
AGTAGAGCTTGTTTAACACA+AGG | 0.608489 | 5.3:+14158488 | MS.gene64895:CDS |
ATTGAAGTGAAGAAAGGGTA+GGG | 0.610945 | 5.3:-14155630 | None:intergenic |
AGGGTGAATGATGAATTTAG+AGG | 0.611358 | 5.3:+14157166 | MS.gene64895:CDS |
TGTTATCAGACGGACAAGCT+CGG | 0.614402 | 5.3:-14156829 | None:intergenic |
GAGTTCACCAGAAACGGCTG+GGG | 0.618854 | 5.3:+14158153 | MS.gene64895:CDS |
ATCTTTATTGGAGATGATGG+AGG | 0.618940 | 5.3:-14158801 | None:intergenic |
ATAACCGATCCTCCGAGACC+CGG | 0.622653 | 5.3:-14156469 | None:intergenic |
AATTGAAGTGAAGAAAGGGT+AGG | 0.623429 | 5.3:-14155631 | None:intergenic |
TCACACCAGTTGTTATCAGA+CGG | 0.627621 | 5.3:-14156839 | None:intergenic |
GCTTTCAATGCCTTTAATGG+GGG | 0.630168 | 5.3:-14157896 | None:intergenic |
CTACAATAGTAAATTTACAC+CGG | 0.630833 | 5.3:-14158125 | None:intergenic |
ACATTGATGATGATAATGGA+AGG | 0.631961 | 5.3:+14155752 | MS.gene64895:CDS |
TAGACAATGGGGACTTACAA+AGG | 0.633097 | 5.3:+14158444 | MS.gene64895:CDS |
TCTTATAGAGGTAGTGAGGG+AGG | 0.636380 | 5.3:+14158773 | MS.gene64895:CDS |
TTTCATATGTAGGATTAACA+AGG | 0.639032 | 5.3:-14156428 | None:intergenic |
GTACTTGCGAGACAAATTGG+CGG | 0.642717 | 5.3:-14156683 | None:intergenic |
GCATTGAACATCTTCGATGG+AGG | 0.646368 | 5.3:+14156327 | MS.gene64895:CDS |
TTGGAATGAATTGTTTCTGG+AGG | 0.646837 | 5.3:-14156522 | None:intergenic |
TCCATCCATAGTAGTCAACA+AGG | 0.646917 | 5.3:-14155711 | None:intergenic |
GATGCAATGGATGATATCCA+AGG | 0.647811 | 5.3:+14156054 | MS.gene64895:CDS |
GAGCTGTTACAGAACTATGA+GGG | 0.647851 | 5.3:-14155546 | None:intergenic |
GTATATCAAGCACCGCTCAG+AGG | 0.649063 | 5.3:+14158625 | MS.gene64895:CDS |
ATGGAGGAAACACATTGCGT+AGG | 0.650471 | 5.3:+14156343 | MS.gene64895:CDS |
TAGTTCACGCCAACACTATG+GGG | 0.654856 | 5.3:+14155917 | MS.gene64895:CDS |
GAAACAATTCATTCCAAACC+AGG | 0.659152 | 5.3:+14156528 | MS.gene64895:CDS |
GGAACAGAACCAGTTATGCG+TGG | 0.659697 | 5.3:-14158842 | None:intergenic |
GAGACCCGAAGCAACTGCAG+AGG | 0.663454 | 5.3:+14155843 | MS.gene64895:CDS |
TTTGCAAATGGTAGACAATG+GGG | 0.667655 | 5.3:+14158433 | MS.gene64895:CDS |
TACATATGAAATCATCAATG+TGG | 0.671358 | 5.3:+14156440 | MS.gene64895:CDS |
AGTTCACGCCAACACTATGG+GGG | 0.676435 | 5.3:+14155918 | MS.gene64895:CDS |
GAGAAGGGTCCTCAAAATGG+CGG | 0.676519 | 5.3:+14158051 | MS.gene64895:CDS |
TGGTTGGAACCGGGTCTCGG+AGG | 0.677436 | 5.3:+14156460 | MS.gene64895:CDS |
AAGAAAGCTGTTGAACTGTG+AGG | 0.698394 | 5.3:-14157873 | None:intergenic |
GGTCATGGCTAGACACAATG+TGG | 0.699792 | 5.3:+14155513 | MS.gene64895:CDS |
GTTCACGCCAACACTATGGG+GGG | 0.717244 | 5.3:+14155919 | MS.gene64895:CDS |
AACACAGCTCAGAAGCCTCG+CGG | 0.732843 | 5.3:+14156600 | MS.gene64895:CDS |
TCAAAGTTATCTACACTACG+TGG | 0.734230 | 5.3:+14156285 | MS.gene64895:CDS |
GAGAATCAAGTTCCTCTGAG+CGG | 0.762406 | 5.3:-14158637 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AAATTGATTTTAACATGTTT+AGG | + | chr5.3:14157364-14157383 | MS.gene64895:intron | 15.0% |
!!! | TCACATTAATTCTTTTAAAT+TGG | - | chr5.3:14158230-14158249 | None:intergenic | 15.0% |
!!! | TGGAATTTTATTAATTTCAT+GGG | + | chr5.3:14158278-14158297 | MS.gene64895:intron | 15.0% |
!!! | TTTAAGTCAAATCTTTTTTA+TGG | - | chr5.3:14155378-14155397 | None:intergenic | 15.0% |
!! | AACTATTTAATCCAAGATAT+TGG | + | chr5.3:14157970-14157989 | MS.gene64895:CDS | 20.0% |
!! | CATATGGAATAAACTTATAA+GGG | - | chr5.3:14156782-14156801 | None:intergenic | 20.0% |
!! | CTTATAAGTTTATTCCATAT+GGG | + | chr5.3:14156781-14156800 | MS.gene64895:CDS | 20.0% |
!! | GTTTAAAAAAGGTTCAATAT+TGG | - | chr5.3:14157264-14157283 | None:intergenic | 20.0% |
!! | TTAAAACTAAAATTCACGTT+TGG | - | chr5.3:14157449-14157468 | None:intergenic | 20.0% |
!! | TTATAAGTTTATTCCATATG+GGG | + | chr5.3:14156782-14156801 | MS.gene64895:CDS | 20.0% |
!!! | AAAGAAAGTTTGTTTCTAAA+TGG | + | chr5.3:14156118-14156137 | MS.gene64895:CDS | 20.0% |
!!! | AAATCTTTTTTATGGTCTAA+AGG | - | chr5.3:14155370-14155389 | None:intergenic | 20.0% |
!!! | AACAAATGGTTACTATTTTT+TGG | + | chr5.3:14157200-14157219 | MS.gene64895:CDS | 20.0% |
!!! | ATAAGCGTAAATTTTTTACA+TGG | - | chr5.3:14155443-14155462 | None:intergenic | 20.0% |
!!! | ATAGTAACCATTTGTTTTTT+AGG | - | chr5.3:14157196-14157215 | None:intergenic | 20.0% |
!!! | ATCATGTCAATAATCTTTTA+TGG | + | chr5.3:14156864-14156883 | MS.gene64895:intron | 20.0% |
!!! | CTGGAATTTTATTAATTTCA+TGG | + | chr5.3:14158277-14158296 | MS.gene64895:intron | 20.0% |
!!! | GGTTCTGAATAAATTTATTT+TGG | - | chr5.3:14157543-14157562 | None:intergenic | 20.0% |
!!! | TGATTTTTGAATTTTCATAC+AGG | + | chr5.3:14156922-14156941 | MS.gene64895:intron | 20.0% |
!!! | TTGATGCATTTTTTAAACAA+GGG | + | chr5.3:14156238-14156257 | MS.gene64895:CDS | 20.0% |
! | AATCATTTGAGAATGTGATT+TGG | - | chr5.3:14156266-14156285 | None:intergenic | 25.0% |
! | AATGAAACTTGATTACTCAA+AGG | - | chr5.3:14157736-14157755 | None:intergenic | 25.0% |
! | ACAATTTCTTGCAACAAAAT+TGG | + | chr5.3:14158204-14158223 | MS.gene64895:intron | 25.0% |
! | ATAATCTTTATTGGAGATGA+TGG | - | chr5.3:14158807-14158826 | None:intergenic | 25.0% |
! | ATTTATGAAGTTAACATGAC+AGG | + | chr5.3:14156369-14156388 | MS.gene64895:CDS | 25.0% |
! | CCATATGGAATAAACTTATA+AGG | - | chr5.3:14156783-14156802 | None:intergenic | 25.0% |
! | CCTTATAAGTTTATTCCATA+TGG | + | chr5.3:14156780-14156799 | MS.gene64895:CDS | 25.0% |
! | CTACAATAGTAAATTTACAC+CGG | - | chr5.3:14158128-14158147 | None:intergenic | 25.0% |
! | CTCTACTAATATACTTCATA+CGG | + | chr5.3:14158591-14158610 | MS.gene64895:CDS | 25.0% |
! | TAACTTGAAGTTGAGATTAA+AGG | + | chr5.3:14157414-14157433 | MS.gene64895:intron | 25.0% |
! | TAATGCATGCAATATTTATG+TGG | + | chr5.3:14157298-14157317 | MS.gene64895:intron | 25.0% |
! | TACATATGAAATCATCAATG+TGG | + | chr5.3:14156440-14156459 | MS.gene64895:CDS | 25.0% |
! | TACTACAACAAGAACAAAAA+TGG | + | chr5.3:14156976-14156995 | MS.gene64895:CDS | 25.0% |
! | TTTCATATGTAGGATTAACA+AGG | - | chr5.3:14156431-14156450 | None:intergenic | 25.0% |
!! | ACATTGATGATTTCATATGT+AGG | - | chr5.3:14156441-14156460 | None:intergenic | 25.0% |
!! | ACTCAAACTAAAAAGCTTTT+GGG | + | chr5.3:14158532-14158551 | MS.gene64895:CDS | 25.0% |
!! | ATTTTCATACAGGAATTTGA+CGG | + | chr5.3:14156932-14156951 | MS.gene64895:intron | 25.0% |
!! | CAATAATCTTTTATGGAGTT+TGG | + | chr5.3:14156871-14156890 | MS.gene64895:intron | 25.0% |
!! | TATGTAATATACAGTTTTGC+AGG | + | chr5.3:14155492-14155511 | MS.gene64895:intron | 25.0% |
!! | TTTTCTTTCAATACTAGTGT+TGG | + | chr5.3:14155054-14155073 | MS.gene64895:CDS | 25.0% |
!!! | CTTGATGCATTTTTTAAACA+AGG | + | chr5.3:14156237-14156256 | MS.gene64895:CDS | 25.0% |
!!! | GTATACATTGATGATGATAA+TGG | + | chr5.3:14155748-14155767 | MS.gene64895:CDS | 25.0% |
!!! | TGAATAACAATTTTAGAGTC+TGG | - | chr5.3:14158329-14158348 | None:intergenic | 25.0% |
AAAGCTGAAAATGAGATAAG+AGG | - | chr5.3:14155607-14155626 | None:intergenic | 30.0% | |
AAATGCTATTCCATGTGATT+TGG | + | chr5.3:14156571-14156590 | MS.gene64895:CDS | 30.0% | |
AAGCTTTCAATGCCTTTAAT+GGG | - | chr5.3:14157901-14157920 | None:intergenic | 30.0% | |
AATGGAAGGCTATTAAGAAT+TGG | + | chr5.3:14156639-14156658 | MS.gene64895:CDS | 30.0% | |
AATTCGGATCCAAATATTCT+CGG | + | chr5.3:14155120-14155139 | MS.gene64895:CDS | 30.0% | |
ACAAAAAACTAAGTCCAAGA+GGG | - | chr5.3:14156176-14156195 | None:intergenic | 30.0% | |
ACTAAACCAGACTCAATATA+TGG | - | chr5.3:14157016-14157035 | None:intergenic | 30.0% | |
ACTCATCAATACCAATATCT+TGG | - | chr5.3:14157984-14158003 | None:intergenic | 30.0% | |
AGGCCTGATATTGTAAATAT+TGG | + | chr5.3:14155024-14155043 | MS.gene64895:CDS | 30.0% | |
ATAAAATTCCAGAATCATGC+TGG | - | chr5.3:14158269-14158288 | None:intergenic | 30.0% | |
ATGTCATAGAAGACAAGAAT+TGG | - | chr5.3:14157690-14157709 | None:intergenic | 30.0% | |
ATTGCATGCATTATTAGCAT+TGG | - | chr5.3:14157291-14157310 | None:intergenic | 30.0% | |
ATTGTCTACCATTTGCAAAA+TGG | - | chr5.3:14158432-14158451 | None:intergenic | 30.0% | |
CAGGAAGATTCTAAATATAG+AGG | + | chr5.3:14155168-14155187 | MS.gene64895:CDS | 30.0% | |
CGGTGTAAATTTACTATTGT+AGG | + | chr5.3:14158126-14158145 | MS.gene64895:CDS | 30.0% | |
CTGAGCATCATAATCTTTAT+TGG | - | chr5.3:14158816-14158835 | None:intergenic | 30.0% | |
CTTGTCTTCTATGACATATA+TGG | + | chr5.3:14157693-14157712 | MS.gene64895:intron | 30.0% | |
GCTCCAATATTTACAATATC+AGG | - | chr5.3:14155030-14155049 | None:intergenic | 30.0% | |
TAAGCTTTCAATGCCTTTAA+TGG | - | chr5.3:14157902-14157921 | None:intergenic | 30.0% | |
TACAAAGGATTCATGACAAA+TGG | + | chr5.3:14158459-14158478 | MS.gene64895:CDS | 30.0% | |
TACAACAAGAACAAAAATGG+TGG | + | chr5.3:14156979-14156998 | MS.gene64895:CDS | 30.0% | |
TATGAAATCATCAATGTGGT+TGG | + | chr5.3:14156444-14156463 | MS.gene64895:CDS | 30.0% | |
TATTAGTTGGAACTGTAGTT+TGG | + | chr5.3:14157131-14157150 | MS.gene64895:CDS | 30.0% | |
TCAAACACACACTAATATCA+AGG | + | chr5.3:14157583-14157602 | MS.gene64895:intron | 30.0% | |
TTGTTTGTGTTGTATTTGAC+AGG | + | chr5.3:14157626-14157645 | MS.gene64895:intron | 30.0% | |
! | ATATATTGAGTCTGGTTTAG+TGG | + | chr5.3:14157015-14157034 | MS.gene64895:CDS | 30.0% |
! | ATTTTATCCACACTATGTAG+GGG | + | chr5.3:14157753-14157772 | MS.gene64895:intron | 30.0% |
! | ATTTTGCAAATGGTAGACAA+TGG | + | chr5.3:14158431-14158450 | MS.gene64895:CDS | 30.0% |
! | CATTTTATCCACACTATGTA+GGG | + | chr5.3:14157752-14157771 | MS.gene64895:intron | 30.0% |
! | CCATTTTCTTTCTCTTTGAT+CGG | - | chr5.3:14158745-14158764 | None:intergenic | 30.0% |
! | CTCAAACTAAAAAGCTTTTG+GGG | + | chr5.3:14158533-14158552 | MS.gene64895:CDS | 30.0% |
! | GACAAGTTCTGATAAAGAAT+GGG | - | chr5.3:14155657-14155676 | None:intergenic | 30.0% |
! | GACTCAAACTAAAAAGCTTT+TGG | + | chr5.3:14158531-14158550 | MS.gene64895:CDS | 30.0% |
! | TCATTTTATCCACACTATGT+AGG | + | chr5.3:14157751-14157770 | MS.gene64895:intron | 30.0% |
! | TGACAAGTTCTGATAAAGAA+TGG | - | chr5.3:14155658-14155677 | None:intergenic | 30.0% |
! | TTAAGAATTGGAGTACCAAT+AGG | + | chr5.3:14156651-14156670 | MS.gene64895:CDS | 30.0% |
! | TTTTGCAAATGGTAGACAAT+GGG | + | chr5.3:14158432-14158451 | MS.gene64895:CDS | 30.0% |
!! | AAAAATTGCTTTAGAAGCTG+CGG | + | chr5.3:14155086-14155105 | MS.gene64895:CDS | 30.0% |
!! | ACATTGATGATGATAATGGA+AGG | + | chr5.3:14155752-14155771 | MS.gene64895:CDS | 30.0% |
!! | ATATTGGTATTGATGAGTCT+AGG | + | chr5.3:14157986-14158005 | MS.gene64895:CDS | 30.0% |
!! | ATGCATTATTAGCATTGGTT+TGG | - | chr5.3:14157286-14157305 | None:intergenic | 30.0% |
!! | GCATTGGTTTGGTTTAAAAA+AGG | - | chr5.3:14157275-14157294 | None:intergenic | 30.0% |
!! | GCTCTCTTTTTCATATTAGT+TGG | + | chr5.3:14157118-14157137 | MS.gene64895:CDS | 30.0% |
!! | GGAGTTTGGATGTTTTATTA+TGG | + | chr5.3:14156885-14156904 | MS.gene64895:intron | 30.0% |
!!! | GTAACCATTTGTTTTTTAGG+TGG | - | chr5.3:14157193-14157212 | None:intergenic | 30.0% |
AAATGGCAAAACTTGACTCA+CGG | + | chr5.3:14156135-14156154 | MS.gene64895:CDS | 35.0% | |
AACTTATAAGGGACAGCATA+AGG | - | chr5.3:14156771-14156790 | None:intergenic | 35.0% | |
AAGTTTATTCCATATGGGGA+TGG | + | chr5.3:14156786-14156805 | MS.gene64895:CDS | 35.0% | |
AATAGCAGAAAGAAAAGCAG+TGG | - | chr5.3:14156007-14156026 | None:intergenic | 35.0% | |
AATCTCTTATAGAGGTAGTG+AGG | + | chr5.3:14158769-14158788 | MS.gene64895:CDS | 35.0% | |
AATTGAAGTGAAGAAAGGGT+AGG | - | chr5.3:14155634-14155653 | None:intergenic | 35.0% | |
ACTTGTTCACTTCCACAATT+AGG | - | chr5.3:14158866-14158885 | None:intergenic | 35.0% | |
AGACACAATGTGGCAATAAT+TGG | + | chr5.3:14155523-14155542 | MS.gene64895:CDS | 35.0% | |
AGCTTTCAATGCCTTTAATG+GGG | - | chr5.3:14157900-14157919 | None:intergenic | 35.0% | |
AGGACCACCTAAAAAACAAA+TGG | + | chr5.3:14157186-14157205 | MS.gene64895:CDS | 35.0% | |
AGGGTGAATGATGAATTTAG+AGG | + | chr5.3:14157166-14157185 | MS.gene64895:CDS | 35.0% | |
AGGTTCATCAACTCATGAAA+AGG | - | chr5.3:14155235-14155254 | None:intergenic | 35.0% | |
ATATCATCCATTGCATCAGA+TGG | - | chr5.3:14156051-14156070 | None:intergenic | 35.0% | |
ATCTCTTATAGAGGTAGTGA+GGG | + | chr5.3:14158770-14158789 | MS.gene64895:CDS | 35.0% | |
ATGGAGAGAATCTCTTATAG+AGG | + | chr5.3:14158761-14158780 | MS.gene64895:CDS | 35.0% | |
ATGGGAATTGAAGTGAAGAA+AGG | - | chr5.3:14155639-14155658 | None:intergenic | 35.0% | |
ATTCTACAACAAGCGGAAAT+TGG | - | chr5.3:14157564-14157583 | None:intergenic | 35.0% | |
ATTGAAGTGAAGAAAGGGTA+GGG | - | chr5.3:14155633-14155652 | None:intergenic | 35.0% | |
CCGATCAAAGAGAAAGAAAA+TGG | + | chr5.3:14158742-14158761 | MS.gene64895:CDS | 35.0% | |
CTGGCATTCATAATACATCA+AGG | + | chr5.3:14155004-14155023 | MS.gene64895:CDS | 35.0% | |
CTTAATAGCCTTCCATTGTT+CGG | - | chr5.3:14156636-14156655 | None:intergenic | 35.0% | |
GAAAATACAGTGAGCACATT+TGG | + | chr5.3:14157775-14157794 | MS.gene64895:CDS | 35.0% | |
GAAACAATTCATTCCAAACC+AGG | + | chr5.3:14156528-14156547 | MS.gene64895:CDS | 35.0% | |
GACAAAAAACTAAGTCCAAG+AGG | - | chr5.3:14156177-14156196 | None:intergenic | 35.0% | |
GATAACAAATGTGCTAGTTC+AGG | + | chr5.3:14155867-14155886 | MS.gene64895:CDS | 35.0% | |
GGTTCATCAACTCATGAAAA+GGG | - | chr5.3:14155234-14155253 | None:intergenic | 35.0% | |
GTAATTGGCAAAGAACCAAT+TGG | + | chr5.3:14157922-14157941 | MS.gene64895:CDS | 35.0% | |
GTCTAATCACTCTGGATTAT+CGG | + | chr5.3:14156494-14156513 | MS.gene64895:CDS | 35.0% | |
GTGTTTGATTCTACAACAAG+CGG | - | chr5.3:14157571-14157590 | None:intergenic | 35.0% | |
TCAAAGTTATCTACACTACG+TGG | + | chr5.3:14156285-14156304 | MS.gene64895:CDS | 35.0% | |
TCACAGCGATCTTTATCAAA+TGG | + | chr5.3:14155675-14155694 | MS.gene64895:CDS | 35.0% | |
TGCATGCAATATTTATGTGG+AGG | + | chr5.3:14157301-14157320 | MS.gene64895:intron | 35.0% | |
TGGGAATTGAAGTGAAGAAA+GGG | - | chr5.3:14155638-14155657 | None:intergenic | 35.0% | |
TTCGCAACACTAAACACTTT+CGG | - | chr5.3:14155946-14155965 | None:intergenic | 35.0% | |
TTGTAGGACTTCAGAGAATT+TGG | - | chr5.3:14158304-14158323 | None:intergenic | 35.0% | |
TTTAGTGTTGCGAAGAATCT+TGG | + | chr5.3:14155952-14155971 | MS.gene64895:CDS | 35.0% | |
TTTGCAAAATGGCAGTTGAT+AGG | - | chr5.3:14158421-14158440 | None:intergenic | 35.0% | |
TTTGCAAATGGTAGACAATG+GGG | + | chr5.3:14158433-14158452 | MS.gene64895:CDS | 35.0% | |
! | AGTAGAGCTTGTTTAACACA+AGG | + | chr5.3:14158488-14158507 | MS.gene64895:CDS | 35.0% |
! | ATATACAGTTTTGCAGGTCA+TGG | + | chr5.3:14155498-14155517 | MS.gene64895:intron | 35.0% |
! | ATCTTTATTGGAGATGATGG+AGG | - | chr5.3:14158804-14158823 | None:intergenic | 35.0% |
! | GGCATTGAAAGCTTAGTAAT+TGG | + | chr5.3:14157907-14157926 | MS.gene64895:CDS | 35.0% |
! | GGTTTGGAATGAATTGTTTC+TGG | - | chr5.3:14156528-14156547 | None:intergenic | 35.0% |
! | GTTCTTAATTGTGCTGTTCA+GGG | + | chr5.3:14158365-14158384 | MS.gene64895:intron | 35.0% |
! | GTTGATAGGTCAATTGCTAA+TGG | - | chr5.3:14158407-14158426 | None:intergenic | 35.0% |
! | TGGAACTGTAGTTTGGATTT+TGG | + | chr5.3:14157138-14157157 | MS.gene64895:CDS | 35.0% |
! | TGTTCTTAATTGTGCTGTTC+AGG | + | chr5.3:14158364-14158383 | MS.gene64895:intron | 35.0% |
! | TTTCTTTTAAGCTCCGAATC+TGG | - | chr5.3:14156105-14156124 | None:intergenic | 35.0% |
! | TTTTAGTACCAGCATGATTC+TGG | + | chr5.3:14158258-14158277 | MS.gene64895:intron | 35.0% |
!! | CTCTTCTTTTTCATCTGCAA+AGG | - | chr5.3:14158711-14158730 | None:intergenic | 35.0% |
!! | GATGATGATAATGGAAGGAA+CGG | + | chr5.3:14155757-14155776 | MS.gene64895:CDS | 35.0% |
!! | TTGGAATGAATTGTTTCTGG+AGG | - | chr5.3:14156525-14156544 | None:intergenic | 35.0% |
!!! | AGTTTGGATTTTGGAGCATA+GGG | + | chr5.3:14157147-14157166 | MS.gene64895:CDS | 35.0% |
!!! | ATCAACTGCCATTTTGCAAA+TGG | + | chr5.3:14158421-14158440 | MS.gene64895:CDS | 35.0% |
!!! | ATTTTAGAGTCTGGCATTGT+AGG | - | chr5.3:14158320-14158339 | None:intergenic | 35.0% |
!!! | TAGTTTGGATTTTGGAGCAT+AGG | + | chr5.3:14157146-14157165 | MS.gene64895:CDS | 35.0% |
AACAAATGTGCTAGTTCAGG+TGG | + | chr5.3:14155870-14155889 | MS.gene64895:CDS | 40.0% | |
AAGAAAGCTGTTGAACTGTG+AGG | - | chr5.3:14157876-14157895 | None:intergenic | 40.0% | |
ACTCACGGAAATACCGATAA+TGG | + | chr5.3:14156150-14156169 | MS.gene64895:CDS | 40.0% | |
ACTCAGCCATATATTGAGTC+TGG | + | chr5.3:14157007-14157026 | MS.gene64895:CDS | 40.0% | |
ATATTGGTGAGCCATGGAAA+AGG | - | chr5.3:14157248-14157267 | None:intergenic | 40.0% | |
ATCATCAATGTGGTTGGAAC+CGG | + | chr5.3:14156450-14156469 | MS.gene64895:CDS | 40.0% | |
ATTGCTAATGGTGAGTCTCT+TGG | - | chr5.3:14158395-14158414 | None:intergenic | 40.0% | |
CAAACCAGGCAATAACTTCA+GGG | + | chr5.3:14156542-14156561 | MS.gene64895:CDS | 40.0% | |
GAACCAATTGGTTACACTCA+AGG | + | chr5.3:14157934-14157953 | MS.gene64895:CDS | 40.0% | |
GAACCTTGAGTGTAACCAAT+TGG | - | chr5.3:14157940-14157959 | None:intergenic | 40.0% | |
GAGCTGTTACAGAACTATGA+GGG | - | chr5.3:14155549-14155568 | None:intergenic | 40.0% | |
GATGCAATGGATGATATCCA+AGG | + | chr5.3:14156054-14156073 | MS.gene64895:CDS | 40.0% | |
GATGCATTGAACATCTTCGA+TGG | + | chr5.3:14156324-14156343 | MS.gene64895:CDS | 40.0% | |
GCGAAGAATCTTGGAATGAT+GGG | + | chr5.3:14155961-14155980 | MS.gene64895:CDS | 40.0% | |
GCTCTAATGATTCTCTGCAA+TGG | + | chr5.3:14154964-14154983 | MS.gene64895:CDS | 40.0% | |
GCTTTCAATGCCTTTAATGG+GGG | - | chr5.3:14157899-14157918 | None:intergenic | 40.0% | |
TAGACAATGGGGACTTACAA+AGG | + | chr5.3:14158444-14158463 | MS.gene64895:CDS | 40.0% | |
TATTGGTGAGCCATGGAAAA+GGG | - | chr5.3:14157247-14157266 | None:intergenic | 40.0% | |
TCACACCAGTTGTTATCAGA+CGG | - | chr5.3:14156842-14156861 | None:intergenic | 40.0% | |
TCCATCCATAGTAGTCAACA+AGG | - | chr5.3:14155714-14155733 | None:intergenic | 40.0% | |
TCGCAACACTAAACACTTTC+GGG | - | chr5.3:14155945-14155964 | None:intergenic | 40.0% | |
TGAGCTGTTACAGAACTATG+AGG | - | chr5.3:14155550-14155569 | None:intergenic | 40.0% | |
TGATGGGAACTGGTTATGTA+TGG | + | chr5.3:14155977-14155996 | MS.gene64895:CDS | 40.0% | |
TGCAAGGAAGATGTCGATAT+AGG | - | chr5.3:14158103-14158122 | None:intergenic | 40.0% | |
TGCAATTCTGTGAGAGGAAA+AGG | + | chr5.3:14157325-14157344 | MS.gene64895:intron | 40.0% | |
TGCGAAGAATCTTGGAATGA+TGG | + | chr5.3:14155960-14155979 | MS.gene64895:CDS | 40.0% | |
TGGTGTAAATGGAGCCAAAA+AGG | - | chr5.3:14157080-14157099 | None:intergenic | 40.0% | |
TTGTTCTTACCATCCCCATA+TGG | - | chr5.3:14156798-14156817 | None:intergenic | 40.0% | |
! | AACCACATCCTTGGTGTAAA+TGG | - | chr5.3:14157091-14157110 | None:intergenic | 40.0% |
! | AATCTTGGAATGATGGGAAC+TGG | + | chr5.3:14155967-14155986 | MS.gene64895:CDS | 40.0% |
! | ACCTTGTTGACTACTATGGA+TGG | + | chr5.3:14155710-14155729 | MS.gene64895:CDS | 40.0% |
! | GGTTATTGGTCTAATCACTC+TGG | + | chr5.3:14156486-14156505 | MS.gene64895:CDS | 40.0% |
! | GTATTTTCCCCTACATAGTG+TGG | - | chr5.3:14157763-14157782 | None:intergenic | 40.0% |
! | TATTATCTCCCCCTTTTCCA+TGG | + | chr5.3:14157234-14157253 | MS.gene64895:intron | 40.0% |
!! | AACTAGTGCTTTGGCCTTTT+TGG | + | chr5.3:14157063-14157082 | MS.gene64895:CDS | 40.0% |
!! | ACTGGTTCTGTTCCTAATTG+TGG | + | chr5.3:14158851-14158870 | MS.gene64895:CDS | 40.0% |
!! | AGGTTTTCTAAGCATTGCTG+AGG | + | chr5.3:14155188-14155207 | MS.gene64895:CDS | 40.0% |
!! | GATAATGGAAGGAACGGAAT+TGG | + | chr5.3:14155763-14155782 | MS.gene64895:CDS | 40.0% |
!! | GGTTTTCTAAGCATTGCTGA+GGG | + | chr5.3:14155189-14155208 | MS.gene64895:CDS | 40.0% |
!! | GTCGTTGTGTGCTACTTATA+TGG | + | chr5.3:14157797-14157816 | MS.gene64895:CDS | 40.0% |
!! | TAAATTTACACCGGCTTGCA+AGG | - | chr5.3:14158119-14158138 | None:intergenic | 40.0% |
!! | TTGGTCTTGCCGAGAATATT+TGG | - | chr5.3:14155132-14155151 | None:intergenic | 40.0% |
!!! | TTTTGGCTCCATTTACACCA+AGG | + | chr5.3:14157080-14157099 | MS.gene64895:CDS | 40.0% |
AAGGGACAGCATAAGGCAAT+AGG | - | chr5.3:14156764-14156783 | None:intergenic | 45.0% | |
AAGTCCAAGAGGGCCATTAT+CGG | - | chr5.3:14156166-14156185 | None:intergenic | 45.0% | |
AGGAACGGAATTGGTGCATT+AGG | + | chr5.3:14155772-14155791 | MS.gene64895:CDS | 45.0% | |
AGTAGTTCACGCCAACACTA+TGG | + | chr5.3:14155915-14155934 | MS.gene64895:CDS | 45.0% | |
AGTGGTAGTAGCACCTGTTA+GGG | + | chr5.3:14157033-14157052 | MS.gene64895:CDS | 45.0% | |
ATGGAGGAAACACATTGCGT+AGG | + | chr5.3:14156343-14156362 | MS.gene64895:CDS | 45.0% | |
ATTGGTGAGCCATGGAAAAG+GGG | - | chr5.3:14157246-14157265 | None:intergenic | 45.0% | |
CAATGGCTTCTCTTCAACTG+TGG | + | chr5.3:14154981-14155000 | MS.gene64895:CDS | 45.0% | |
CAATTTGTCTCGCAAGTACC+AGG | + | chr5.3:14156687-14156706 | MS.gene64895:CDS | 45.0% | |
CAGCTTTCTTCCCCCATTAA+AGG | + | chr5.3:14157886-14157905 | MS.gene64895:CDS | 45.0% | |
CCAAACCAGGCAATAACTTC+AGG | + | chr5.3:14156541-14156560 | MS.gene64895:CDS | 45.0% | |
CCAGGCACAGATACATTTCA+AGG | + | chr5.3:14156705-14156724 | MS.gene64895:CDS | 45.0% | |
CCTGAAGTTATTGCCTGGTT+TGG | - | chr5.3:14156544-14156563 | None:intergenic | 45.0% | |
CCTTGAAATGTATCTGTGCC+TGG | - | chr5.3:14156708-14156727 | None:intergenic | 45.0% | |
CTAGTTTCTGTCTCCCTAAC+AGG | - | chr5.3:14157049-14157068 | None:intergenic | 45.0% | |
CTCCATTTACACCAAGGATG+TGG | + | chr5.3:14157086-14157105 | MS.gene64895:CDS | 45.0% | |
CTGAAGAGAGAGCTTCAACT+TGG | - | chr5.3:14155151-14155170 | None:intergenic | 45.0% | |
CTGGTACTTGCGAGACAAAT+TGG | - | chr5.3:14156689-14156708 | None:intergenic | 45.0% | |
CTTGAGAAGGGTCCTCAAAA+TGG | + | chr5.3:14158048-14158067 | MS.gene64895:CDS | 45.0% | |
CTTGTCCGTCTGATAACAAC+TGG | + | chr5.3:14156834-14156853 | MS.gene64895:CDS | 45.0% | |
GAGAATCAAGTTCCTCTGAG+CGG | - | chr5.3:14158640-14158659 | None:intergenic | 45.0% | |
GATCTGTGGATCAGCATGTT+TGG | + | chr5.3:14158565-14158584 | MS.gene64895:CDS | 45.0% | |
GCATTGAACATCTTCGATGG+AGG | + | chr5.3:14156327-14156346 | MS.gene64895:CDS | 45.0% | |
GGAGACAGAAACTAGTGCTT+TGG | + | chr5.3:14157054-14157073 | MS.gene64895:CDS | 45.0% | |
GGTCAAGAGTTCACCAGAAA+CGG | + | chr5.3:14158147-14158166 | MS.gene64895:CDS | 45.0% | |
GGTTCAATATTGGTGAGCCA+TGG | - | chr5.3:14157254-14157273 | None:intergenic | 45.0% | |
GTACTTGCGAGACAAATTGG+CGG | - | chr5.3:14156686-14156705 | None:intergenic | 45.0% | |
GTAGTTCACGCCAACACTAT+GGG | + | chr5.3:14155916-14155935 | MS.gene64895:CDS | 45.0% | |
GTTAACATGACAGGTGTGAC+AGG | + | chr5.3:14156378-14156397 | MS.gene64895:CDS | 45.0% | |
TAGTGGTAGTAGCACCTGTT+AGG | + | chr5.3:14157032-14157051 | MS.gene64895:CDS | 45.0% | |
TAGTTCACGCCAACACTATG+GGG | + | chr5.3:14155917-14155936 | MS.gene64895:CDS | 45.0% | |
TATCTCCTCTGCAGTTGCTT+CGG | - | chr5.3:14155851-14155870 | None:intergenic | 45.0% | |
TCATCAATGTGGTTGGAACC+GGG | + | chr5.3:14156451-14156470 | MS.gene64895:CDS | 45.0% | |
TCCATTGCATCAGATGGCAA+TGG | - | chr5.3:14156045-14156064 | None:intergenic | 45.0% | |
TCCATTGCCATCTGATGCAA+TGG | + | chr5.3:14156041-14156060 | MS.gene64895:CDS | 45.0% | |
TCTTATAGAGGTAGTGAGGG+AGG | + | chr5.3:14158773-14158792 | MS.gene64895:CDS | 45.0% | |
TGAGATTCTGCAACGCTTCT+CGG | - | chr5.3:14155809-14155828 | None:intergenic | 45.0% | |
TGCGGTCGACGATGTAAATT+CGG | + | chr5.3:14155104-14155123 | MS.gene64895:CDS | 45.0% | |
TGTTATCAGACGGACAAGCT+CGG | - | chr5.3:14156832-14156851 | None:intergenic | 45.0% | |
TGTTTCCAGGCCAAATCACA+TGG | - | chr5.3:14156584-14156603 | None:intergenic | 45.0% | |
! | AATACCGATAATGGCCCTCT+TGG | + | chr5.3:14156159-14156178 | MS.gene64895:CDS | 45.0% |
! | CAAGTTGAAGCTCTCTCTTC+AGG | + | chr5.3:14155149-14155168 | MS.gene64895:CDS | 45.0% |
! | CTATTCCATGTGATTTGGCC+TGG | + | chr5.3:14156576-14156595 | MS.gene64895:CDS | 45.0% |
! | GCAGACCTTGTTGACTACTA+TGG | + | chr5.3:14155706-14155725 | MS.gene64895:CDS | 45.0% |
! | GGGTTTTTCCGAACAATGGA+AGG | + | chr5.3:14156625-14156644 | MS.gene64895:CDS | 45.0% |
! | GGTTGGGTTTTTCCGAACAA+TGG | + | chr5.3:14156621-14156640 | MS.gene64895:CDS | 45.0% |
!! | AAAAAAATAAAAAATTTACA+AGG | - | chr5.3:14155255-14155274 | None:intergenic | 5.0% |
!!! | TTGTAAATTTTTTATTTTTT+TGG | + | chr5.3:14155254-14155273 | MS.gene64895:intron | 5.0% |
AAACCCTAGCTCAGGATCGT+CGG | + | chr5.3:14158667-14158686 | MS.gene64895:CDS | 50.0% | |
AAGAGTTCACCAGAAACGGC+TGG | + | chr5.3:14158151-14158170 | MS.gene64895:CDS | 50.0% | |
AGAGTTCACCAGAAACGGCT+GGG | + | chr5.3:14158152-14158171 | MS.gene64895:CDS | 50.0% | |
AGTGCTCTAGCAGCTTCTTC+AGG | - | chr5.3:14158030-14158049 | None:intergenic | 50.0% | |
AGTTCACGCCAACACTATGG+GGG | + | chr5.3:14155918-14155937 | MS.gene64895:CDS | 50.0% | |
ATCTCCTCTGCAGTTGCTTC+GGG | - | chr5.3:14155850-14155869 | None:intergenic | 50.0% | |
CAGGAATTTGACGGTGCAGT+AGG | + | chr5.3:14156941-14156960 | MS.gene64895:intron | 50.0% | |
CTCTCCCTGAAGTTATTGCC+TGG | - | chr5.3:14156549-14156568 | None:intergenic | 50.0% | |
GAACCAGTTATGCGTGGAGA+TGG | - | chr5.3:14158839-14158858 | None:intergenic | 50.0% | |
GAGAAGGGTCCTCAAAATGG+CGG | + | chr5.3:14158051-14158070 | MS.gene64895:CDS | 50.0% | |
GCTGTGACAAACCACATCCT+TGG | - | chr5.3:14157100-14157119 | None:intergenic | 50.0% | |
GGAACAGAACCAGTTATGCG+TGG | - | chr5.3:14158845-14158864 | None:intergenic | 50.0% | |
GGTCATGGCTAGACACAATG+TGG | + | chr5.3:14155513-14155532 | MS.gene64895:CDS | 50.0% | |
TACAAATCCCCAGCCGTTTC+TGG | - | chr5.3:14158163-14158182 | None:intergenic | 50.0% | |
TCGACATCTTCCTTGCAAGC+CGG | + | chr5.3:14158106-14158125 | MS.gene64895:CDS | 50.0% | |
TGGCGGTAACTAACGCCTAT+TGG | - | chr5.3:14156669-14156688 | None:intergenic | 50.0% | |
TGGGGACTGTATGTGATCTG+TGG | + | chr5.3:14158551-14158570 | MS.gene64895:CDS | 50.0% | |
TTGGTGAGCCATGGAAAAGG+GGG | - | chr5.3:14157245-14157264 | None:intergenic | 50.0% | |
! | ACGATCCTGAGCTAGGGTTT+TGG | - | chr5.3:14158667-14158686 | None:intergenic | 50.0% |
! | AGCTGCTAGAGCACTTGAGA+AGG | + | chr5.3:14158035-14158054 | MS.gene64895:CDS | 50.0% |
! | GCTGCTAGAGCACTTGAGAA+GGG | + | chr5.3:14158036-14158055 | MS.gene64895:CDS | 50.0% |
! | GTATATCAAGCACCGCTCAG+AGG | + | chr5.3:14158625-14158644 | MS.gene64895:CDS | 50.0% |
AAACCCGACGATCCTGAGCT+AGG | - | chr5.3:14158674-14158693 | None:intergenic | 55.0% | |
AACACAGCTCAGAAGCCTCG+CGG | + | chr5.3:14156600-14156619 | MS.gene64895:CDS | 55.0% | |
AACCCGACGATCCTGAGCTA+GGG | - | chr5.3:14158673-14158692 | None:intergenic | 55.0% | |
AACCCTAGCTCAGGATCGTC+GGG | + | chr5.3:14158668-14158687 | MS.gene64895:CDS | 55.0% | |
ACGCGTGCACACACCAGATT+CGG | + | chr5.3:14156089-14156108 | MS.gene64895:CDS | 55.0% | |
ATAACCGATCCTCCGAGACC+CGG | - | chr5.3:14156472-14156491 | None:intergenic | 55.0% | |
ATGTGGTTGGAACCGGGTCT+CGG | + | chr5.3:14156457-14156476 | MS.gene64895:CDS | 55.0% | |
CAGCCATCTCCACGCATAAC+TGG | + | chr5.3:14158833-14158852 | MS.gene64895:CDS | 55.0% | |
CCTGACCAAAACCCTAGCTC+AGG | + | chr5.3:14158659-14158678 | MS.gene64895:CDS | 55.0% | |
GAGTTCACCAGAAACGGCTG+GGG | + | chr5.3:14158153-14158172 | MS.gene64895:CDS | 55.0% | |
GGAGGCTGCAATTCTGTGAG+AGG | + | chr5.3:14157319-14157338 | MS.gene64895:intron | 55.0% | |
GGCTTCTCTTCAACTGTGGC+TGG | + | chr5.3:14154985-14155004 | MS.gene64895:CDS | 55.0% | |
GGCTTCTGAGCTGTGTTTCC+AGG | - | chr5.3:14156597-14156616 | None:intergenic | 55.0% | |
GGTCTCGGAGGATCGGTTAT+TGG | + | chr5.3:14156472-14156491 | MS.gene64895:CDS | 55.0% | |
GTTCACGCCAACACTATGGG+GGG | + | chr5.3:14155919-14155938 | MS.gene64895:CDS | 55.0% | |
TTCGGAAAAACCCAACCGCG+AGG | - | chr5.3:14156618-14156637 | None:intergenic | 55.0% | |
!! | CCTGAGCTAGGGTTTTGGTC+AGG | - | chr5.3:14158662-14158681 | None:intergenic | 55.0% |
!! | CGGACAAGCTCGGTGTTACT+AGG | - | chr5.3:14156822-14156841 | None:intergenic | 55.0% |
AGCTCAGAAGCCTCGCGGTT+GGG | + | chr5.3:14156605-14156624 | MS.gene64895:CDS | 60.0% | |
CGCGTGCTGTCAACACTCCT+TGG | - | chr5.3:14156074-14156093 | None:intergenic | 60.0% | |
GAGACCCGAAGCAACTGCAG+AGG | + | chr5.3:14155843-14155862 | MS.gene64895:CDS | 60.0% | |
GCAGTTGCTTCGGGTCTCAC+AGG | - | chr5.3:14155841-14155860 | None:intergenic | 60.0% | |
TTTCGGGCCCCCCATAGTGT+TGG | - | chr5.3:14155929-14155948 | None:intergenic | 60.0% | |
!! | GCAGCAACGCCGCCATTTTG+AGG | - | chr5.3:14158063-14158082 | None:intergenic | 60.0% |
CAGCTCAGAAGCCTCGCGGT+TGG | + | chr5.3:14156604-14156623 | MS.gene64895:CDS | 65.0% | |
GGAACCGGGTCTCGGAGGAT+CGG | + | chr5.3:14156465-14156484 | MS.gene64895:CDS | 65.0% | |
TGGTTGGAACCGGGTCTCGG+AGG | + | chr5.3:14156460-14156479 | MS.gene64895:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.3 | gene | 14154943 | 14158895 | 14154943 | ID=MS.gene64895 |
chr5.3 | mRNA | 14154943 | 14158895 | 14154943 | ID=MS.gene64895.t1;Parent=MS.gene64895 |
chr5.3 | exon | 14154943 | 14155210 | 14154943 | ID=MS.gene64895.t1.exon1;Parent=MS.gene64895.t1 |
chr5.3 | CDS | 14154943 | 14155210 | 14154943 | ID=cds.MS.gene64895.t1;Parent=MS.gene64895.t1 |
chr5.3 | exon | 14155506 | 14156857 | 14155506 | ID=MS.gene64895.t1.exon2;Parent=MS.gene64895.t1 |
chr5.3 | CDS | 14155506 | 14156857 | 14155506 | ID=cds.MS.gene64895.t1;Parent=MS.gene64895.t1 |
chr5.3 | exon | 14156944 | 14157221 | 14156944 | ID=MS.gene64895.t1.exon3;Parent=MS.gene64895.t1 |
chr5.3 | CDS | 14156944 | 14157221 | 14156944 | ID=cds.MS.gene64895.t1;Parent=MS.gene64895.t1 |
chr5.3 | exon | 14157648 | 14157679 | 14157648 | ID=MS.gene64895.t1.exon4;Parent=MS.gene64895.t1 |
chr5.3 | CDS | 14157648 | 14157679 | 14157648 | ID=cds.MS.gene64895.t1;Parent=MS.gene64895.t1 |
chr5.3 | exon | 14157773 | 14158179 | 14157773 | ID=MS.gene64895.t1.exon5;Parent=MS.gene64895.t1 |
chr5.3 | CDS | 14157773 | 14158179 | 14157773 | ID=cds.MS.gene64895.t1;Parent=MS.gene64895.t1 |
chr5.3 | exon | 14158386 | 14158895 | 14158386 | ID=MS.gene64895.t1.exon6;Parent=MS.gene64895.t1 |
chr5.3 | CDS | 14158386 | 14158895 | 14158386 | ID=cds.MS.gene64895.t1;Parent=MS.gene64895.t1 |
Gene Sequence |
Protein sequence |