Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05995.t1 | XP_013447087.1 | 93.7 | 431 | 11 | 2 | 1 | 431 | 1 | 415 | 4.10E-180 | 641 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05995.t1 | Q38897 | 52.0 | 333 | 107 | 4 | 152 | 431 | 105 | 437 | 1.6e-68 | 261.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05995.t1 | A0A072TUA6 | 93.7 | 431 | 11 | 2 | 1 | 431 | 1 | 415 | 2.9e-180 | 641.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049656 | MS.gene05995 | 0.800132 | 1.66E-48 | -1.69E-46 |
| MS.gene049657 | MS.gene05995 | 0.814742 | 1.32E-51 | -1.69E-46 |
| MS.gene050170 | MS.gene05995 | 0.827302 | 1.69E-54 | -1.69E-46 |
| MS.gene051838 | MS.gene05995 | 0.822778 | 1.97E-53 | -1.69E-46 |
| MS.gene052486 | MS.gene05995 | 0.80352 | 3.35E-49 | -1.69E-46 |
| MS.gene053633 | MS.gene05995 | 0.821956 | 3.06E-53 | -1.69E-46 |
| MS.gene05589 | MS.gene05995 | 0.801762 | 7.73E-49 | -1.69E-46 |
| MS.gene056166 | MS.gene05995 | 0.808561 | 2.91E-50 | -1.69E-46 |
| MS.gene056387 | MS.gene05995 | 0.801261 | 9.79E-49 | -1.69E-46 |
| MS.gene058157 | MS.gene05995 | 0.824191 | 9.23E-54 | -1.69E-46 |
| MS.gene05995 | MS.gene05996 | 0.940051 | 4.51E-100 | -1.69E-46 |
| MS.gene05995 | MS.gene06000 | 0.808892 | 2.48E-50 | -1.69E-46 |
| MS.gene05995 | MS.gene060187 | -0.807388 | 5.18E-50 | -1.69E-46 |
| MS.gene05995 | MS.gene060872 | -0.801537 | 8.59E-49 | -1.69E-46 |
| MS.gene05995 | MS.gene060982 | 0.804665 | 1.94E-49 | -1.69E-46 |
| MS.gene05995 | MS.gene061887 | 0.823612 | 1.26E-53 | -1.69E-46 |
| MS.gene05995 | MS.gene062621 | 0.825856 | 3.73E-54 | -1.69E-46 |
| MS.gene05995 | MS.gene064062 | -0.835497 | 1.62E-56 | -1.69E-46 |
| MS.gene05995 | MS.gene064294 | 0.808657 | 2.78E-50 | -1.69E-46 |
| MS.gene05995 | MS.gene064396 | 0.803463 | 3.44E-49 | -1.69E-46 |
| MS.gene05995 | MS.gene064707 | 0.801986 | 6.95E-49 | -1.69E-46 |
| MS.gene05995 | MS.gene065360 | 0.828348 | 9.45E-55 | -1.69E-46 |
| MS.gene05995 | MS.gene065540 | 0.805091 | 1.58E-49 | -1.69E-46 |
| MS.gene05995 | MS.gene065675 | 0.824587 | 7.45E-54 | -1.69E-46 |
| MS.gene05995 | MS.gene066003 | 0.805535 | 1.27E-49 | -1.69E-46 |
| MS.gene05995 | MS.gene066030 | 0.828396 | 9.20E-55 | -1.69E-46 |
| MS.gene05995 | MS.gene066534 | -0.813868 | 2.06E-51 | -1.69E-46 |
| MS.gene05995 | MS.gene067713 | 0.823878 | 1.09E-53 | -1.69E-46 |
| MS.gene05995 | MS.gene068138 | 0.809633 | 1.72E-50 | -1.69E-46 |
| MS.gene05995 | MS.gene069855 | 0.810432 | 1.16E-50 | -1.69E-46 |
| MS.gene05995 | MS.gene070955 | 0.811308 | 7.47E-51 | -1.69E-46 |
| MS.gene05995 | MS.gene072303 | 0.841033 | 6.07E-58 | -1.69E-46 |
| MS.gene05995 | MS.gene072847 | 0.807263 | 5.51E-50 | -1.69E-46 |
| MS.gene05995 | MS.gene073118 | 0.825953 | 3.54E-54 | -1.69E-46 |
| MS.gene05995 | MS.gene07329 | 0.829064 | 6.34E-55 | -1.69E-46 |
| MS.gene05995 | MS.gene07636 | 0.817533 | 3.14E-52 | -1.69E-46 |
| MS.gene05995 | MS.gene08253 | 0.814724 | 1.33E-51 | -1.69E-46 |
| MS.gene05995 | MS.gene08254 | 0.828119 | 1.07E-54 | -1.69E-46 |
| MS.gene05995 | MS.gene08588 | 0.820687 | 6.01E-53 | -1.69E-46 |
| MS.gene05995 | MS.gene09022 | -0.863927 | 1.75E-64 | -1.69E-46 |
| MS.gene05995 | MS.gene09053 | 0.826396 | 2.78E-54 | -1.69E-46 |
| MS.gene05995 | MS.gene09193 | 0.81125 | 7.69E-51 | -1.69E-46 |
| MS.gene05995 | MS.gene09795 | 0.824645 | 7.22E-54 | -1.69E-46 |
| MS.gene05995 | MS.gene09797 | 0.819424 | 1.17E-52 | -1.69E-46 |
| MS.gene05995 | MS.gene09865 | 0.827382 | 1.61E-54 | -1.69E-46 |
| MS.gene05995 | MS.gene20878 | 0.814472 | 1.51E-51 | -1.69E-46 |
| MS.gene05995 | MS.gene21150 | 0.806686 | 7.29E-50 | -1.69E-46 |
| MS.gene05995 | MS.gene22475 | 0.810163 | 1.32E-50 | -1.69E-46 |
| MS.gene05995 | MS.gene24562 | 0.81323 | 2.84E-51 | -1.69E-46 |
| MS.gene05995 | MS.gene24857 | 0.808515 | 2.98E-50 | -1.69E-46 |
| MS.gene05995 | MS.gene25726 | -0.80209 | 6.62E-49 | -1.69E-46 |
| MS.gene05995 | MS.gene26532 | -0.805224 | 1.48E-49 | -1.69E-46 |
| MS.gene05995 | MS.gene27876 | 0.802725 | 4.90E-49 | -1.69E-46 |
| MS.gene05995 | MS.gene28334 | 0.800741 | 1.25E-48 | -1.69E-46 |
| MS.gene05995 | MS.gene29014 | 0.804425 | 2.17E-49 | -1.69E-46 |
| MS.gene05995 | MS.gene29028 | 0.828026 | 1.13E-54 | -1.69E-46 |
| MS.gene05995 | MS.gene29115 | 0.828598 | 8.22E-55 | -1.69E-46 |
| MS.gene05995 | MS.gene30217 | -0.813047 | 3.12E-51 | -1.69E-46 |
| MS.gene05995 | MS.gene30743 | 0.841793 | 3.83E-58 | -1.69E-46 |
| MS.gene05995 | MS.gene31105 | 0.835699 | 1.44E-56 | -1.69E-46 |
| MS.gene05995 | MS.gene31106 | 0.821889 | 3.18E-53 | -1.69E-46 |
| MS.gene05995 | MS.gene32677 | 0.853996 | 1.65E-61 | -1.69E-46 |
| MS.gene05995 | MS.gene33017 | 0.807985 | 3.87E-50 | -1.69E-46 |
| MS.gene05995 | MS.gene33309 | 0.822444 | 2.36E-53 | -1.69E-46 |
| MS.gene05995 | MS.gene34038 | 0.819503 | 1.12E-52 | -1.69E-46 |
| MS.gene05995 | MS.gene34092 | 0.804404 | 2.20E-49 | -1.69E-46 |
| MS.gene05995 | MS.gene34171 | 0.804777 | 1.84E-49 | -1.69E-46 |
| MS.gene05995 | MS.gene34383 | 0.812399 | 4.32E-51 | -1.69E-46 |
| MS.gene05995 | MS.gene35338 | 0.820311 | 7.34E-53 | -1.69E-46 |
| MS.gene05995 | MS.gene36337 | 0.803238 | 3.84E-49 | -1.69E-46 |
| MS.gene05995 | MS.gene40110 | 0.82155 | 3.80E-53 | -1.69E-46 |
| MS.gene05995 | MS.gene42301 | 0.807147 | 5.83E-50 | -1.69E-46 |
| MS.gene05995 | MS.gene42835 | -0.813529 | 2.44E-51 | -1.69E-46 |
| MS.gene05995 | MS.gene44305 | 0.801649 | 8.15E-49 | -1.69E-46 |
| MS.gene05995 | MS.gene44440 | 0.814423 | 1.55E-51 | -1.69E-46 |
| MS.gene05995 | MS.gene44639 | 0.833295 | 5.79E-56 | -1.69E-46 |
| MS.gene05995 | MS.gene46880 | 0.803588 | 3.25E-49 | -1.69E-46 |
| MS.gene05995 | MS.gene47843 | 0.815152 | 1.07E-51 | -1.69E-46 |
| MS.gene05995 | MS.gene47989 | 0.800678 | 1.29E-48 | -1.69E-46 |
| MS.gene05995 | MS.gene48584 | 0.816238 | 6.13E-52 | -1.69E-46 |
| MS.gene05995 | MS.gene48646 | 0.808011 | 3.82E-50 | -1.69E-46 |
| MS.gene05995 | MS.gene48648 | 0.801673 | 8.06E-49 | -1.69E-46 |
| MS.gene05995 | MS.gene48649 | 0.801368 | 9.31E-49 | -1.69E-46 |
| MS.gene05995 | MS.gene50638 | 0.838062 | 3.59E-57 | -1.69E-46 |
| MS.gene05995 | MS.gene51887 | 0.808694 | 2.73E-50 | -1.69E-46 |
| MS.gene05995 | MS.gene52739 | 0.831817 | 1.35E-55 | -1.69E-46 |
| MS.gene05995 | MS.gene52976 | 0.817584 | 3.06E-52 | -1.69E-46 |
| MS.gene05995 | MS.gene54068 | 0.832948 | 7.06E-56 | -1.69E-46 |
| MS.gene05995 | MS.gene54413 | 0.82437 | 8.37E-54 | -1.69E-46 |
| MS.gene05995 | MS.gene55657 | 0.806501 | 7.98E-50 | -1.69E-46 |
| MS.gene05995 | MS.gene55726 | 0.975534 | 3.96E-140 | -1.69E-46 |
| MS.gene05995 | MS.gene55727 | 0.843658 | 1.22E-58 | -1.69E-46 |
| MS.gene05995 | MS.gene55731 | 0.808453 | 3.07E-50 | -1.69E-46 |
| MS.gene05995 | MS.gene55771 | -0.847809 | 9.14E-60 | -1.69E-46 |
| MS.gene05995 | MS.gene56598 | 0.80386 | 2.85E-49 | -1.69E-46 |
| MS.gene05995 | MS.gene57239 | 0.814463 | 1.52E-51 | -1.69E-46 |
| MS.gene05995 | MS.gene57264 | 0.807306 | 5.39E-50 | -1.69E-46 |
| MS.gene05995 | MS.gene57602 | 0.813593 | 2.37E-51 | -1.69E-46 |
| MS.gene05995 | MS.gene58165 | 0.800696 | 1.28E-48 | -1.69E-46 |
| MS.gene05995 | MS.gene61145 | 0.801565 | 8.48E-49 | -1.69E-46 |
| MS.gene05995 | MS.gene61919 | 0.80588 | 1.08E-49 | -1.69E-46 |
| MS.gene05995 | MS.gene62191 | 0.818773 | 1.65E-52 | -1.69E-46 |
| MS.gene05995 | MS.gene63486 | 0.804564 | 2.03E-49 | -1.69E-46 |
| MS.gene05995 | MS.gene63749 | -0.810133 | 1.34E-50 | -1.69E-46 |
| MS.gene05995 | MS.gene63751 | -0.848064 | 7.77E-60 | -1.69E-46 |
| MS.gene05995 | MS.gene64286 | 0.805663 | 1.20E-49 | -1.69E-46 |
| MS.gene05995 | MS.gene64895 | 0.807661 | 4.53E-50 | -1.69E-46 |
| MS.gene05995 | MS.gene65336 | 0.852887 | 3.44E-61 | -1.69E-46 |
| MS.gene05995 | MS.gene65516 | -0.803997 | 2.67E-49 | -1.69E-46 |
| MS.gene05995 | MS.gene65675 | 0.814436 | 1.54E-51 | -1.69E-46 |
| MS.gene05995 | MS.gene66304 | -0.841571 | 4.38E-58 | -1.69E-46 |
| MS.gene05995 | MS.gene68529 | 0.829025 | 6.48E-55 | -1.69E-46 |
| MS.gene05995 | MS.gene68722 | -0.802715 | 4.92E-49 | -1.69E-46 |
| MS.gene05995 | MS.gene68980 | 0.857053 | 2.12E-62 | -1.69E-46 |
| MS.gene05995 | MS.gene69450 | 0.805457 | 1.32E-49 | -1.69E-46 |
| MS.gene05995 | MS.gene69607 | -0.809403 | 1.93E-50 | -1.69E-46 |
| MS.gene05995 | MS.gene69749 | 0.812057 | 5.13E-51 | -1.69E-46 |
| MS.gene05995 | MS.gene70491 | -0.831618 | 1.51E-55 | -1.69E-46 |
| MS.gene05995 | MS.gene71420 | 0.828628 | 8.09E-55 | -1.69E-46 |
| MS.gene05995 | MS.gene71651 | 0.800152 | 1.65E-48 | -1.69E-46 |
| MS.gene05995 | MS.gene71697 | 0.802454 | 5.57E-49 | -1.69E-46 |
| MS.gene05995 | MS.gene72055 | 0.813935 | 1.99E-51 | -1.69E-46 |
| MS.gene05995 | MS.gene72111 | -0.851647 | 7.74E-61 | -1.69E-46 |
| MS.gene05995 | MS.gene72786 | 0.825675 | 4.12E-54 | -1.69E-46 |
| MS.gene05995 | MS.gene72916 | 0.811333 | 7.38E-51 | -1.69E-46 |
| MS.gene05995 | MS.gene73493 | 0.80036 | 1.50E-48 | -1.69E-46 |
| MS.gene05995 | MS.gene73544 | 0.805049 | 1.61E-49 | -1.69E-46 |
| MS.gene05995 | MS.gene73545 | 0.815575 | 8.62E-52 | -1.69E-46 |
| MS.gene05995 | MS.gene73893 | -0.804142 | 2.49E-49 | -1.69E-46 |
| MS.gene05995 | MS.gene74575 | 0.80165 | 8.15E-49 | -1.69E-46 |
| MS.gene05995 | MS.gene76521 | 0.808963 | 2.39E-50 | -1.69E-46 |
| MS.gene05995 | MS.gene78325 | -0.814086 | 1.84E-51 | -1.69E-46 |
| MS.gene05995 | MS.gene78396 | 0.83617 | 1.09E-56 | -1.69E-46 |
| MS.gene05995 | MS.gene79284 | 0.81199 | 5.31E-51 | -1.69E-46 |
| MS.gene05995 | MS.gene80210 | 0.846845 | 1.68E-59 | -1.69E-46 |
| MS.gene05995 | MS.gene82917 | 0.801833 | 7.47E-49 | -1.69E-46 |
| MS.gene05995 | MS.gene83251 | 0.805293 | 1.43E-49 | -1.69E-46 |
| MS.gene05995 | MS.gene85136 | 0.816142 | 6.44E-52 | -1.69E-46 |
| MS.gene05995 | MS.gene86071 | 0.807401 | 5.15E-50 | -1.69E-46 |
| MS.gene05995 | MS.gene86293 | 0.834966 | 2.21E-56 | -1.69E-46 |
| MS.gene05995 | MS.gene86294 | 0.805239 | 1.47E-49 | -1.69E-46 |
| MS.gene05995 | MS.gene86540 | 0.812925 | 3.32E-51 | -1.69E-46 |
| MS.gene05995 | MS.gene87473 | 0.806699 | 7.25E-50 | -1.69E-46 |
| MS.gene05995 | MS.gene88640 | 0.821213 | 4.55E-53 | -1.69E-46 |
| MS.gene05995 | MS.gene89722 | 0.807042 | 6.13E-50 | -1.69E-46 |
| MS.gene05995 | MS.gene91075 | -0.837787 | 4.23E-57 | -1.69E-46 |
| MS.gene05995 | MS.gene91156 | 0.818536 | 1.86E-52 | -1.69E-46 |
| MS.gene05995 | MS.gene91597 | 0.821368 | 4.19E-53 | -1.69E-46 |
| MS.gene05995 | MS.gene92636 | 0.800562 | 1.36E-48 | -1.69E-46 |
| MS.gene05995 | MS.gene93738 | 0.830743 | 2.47E-55 | -1.69E-46 |
| MS.gene05995 | MS.gene94628 | 0.824456 | 7.99E-54 | -1.69E-46 |
| MS.gene05995 | MS.gene96194 | -0.856865 | 2.41E-62 | -1.69E-46 |
| MS.gene05995 | MS.gene97656 | 0.833699 | 4.59E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05995.t1 | MTR_8g098815 | 94.907 | 432 | 6 | 3 | 1 | 432 | 1 | 416 | 0.0 | 839 |
| MS.gene05995.t1 | MTR_5g018860 | 55.118 | 254 | 96 | 3 | 190 | 432 | 325 | 571 | 2.18e-83 | 271 |
| MS.gene05995.t1 | MTR_8g078480 | 54.074 | 270 | 98 | 4 | 189 | 432 | 354 | 623 | 1.64e-80 | 265 |
| MS.gene05995.t1 | MTR_1g057790 | 47.177 | 248 | 102 | 3 | 201 | 433 | 161 | 394 | 9.13e-65 | 219 |
| MS.gene05995.t1 | MTR_1g023050 | 48.374 | 246 | 97 | 5 | 204 | 433 | 173 | 404 | 1.30e-64 | 219 |
| MS.gene05995.t1 | MTR_3g112300 | 43.580 | 257 | 106 | 6 | 194 | 432 | 157 | 392 | 1.05e-60 | 202 |
| MS.gene05995.t1 | MTR_3g112300 | 43.411 | 258 | 107 | 6 | 194 | 433 | 157 | 393 | 1.30e-59 | 203 |
| MS.gene05995.t1 | MTR_3g112300 | 43.411 | 258 | 107 | 6 | 194 | 433 | 157 | 393 | 2.33e-59 | 204 |
| MS.gene05995.t1 | MTR_7g106320 | 46.254 | 307 | 141 | 7 | 138 | 433 | 113 | 406 | 4.61e-59 | 204 |
| MS.gene05995.t1 | MTR_4g051532 | 49.356 | 233 | 111 | 3 | 205 | 433 | 221 | 450 | 4.08e-56 | 197 |
| MS.gene05995.t1 | MTR_3g112300 | 41.949 | 236 | 98 | 6 | 194 | 411 | 157 | 371 | 1.60e-50 | 175 |
| MS.gene05995.t1 | MTR_4g019450 | 42.276 | 246 | 94 | 6 | 201 | 432 | 196 | 407 | 8.82e-48 | 172 |
| MS.gene05995.t1 | MTR_7g065050 | 42.308 | 234 | 117 | 5 | 201 | 433 | 137 | 353 | 3.15e-47 | 170 |
| MS.gene05995.t1 | MTR_3g112290 | 40.496 | 242 | 123 | 7 | 201 | 432 | 165 | 395 | 1.92e-44 | 160 |
| MS.gene05995.t1 | MTR_2g095050 | 41.393 | 244 | 126 | 5 | 201 | 432 | 248 | 486 | 2.18e-44 | 164 |
| MS.gene05995.t1 | MTR_1g016490 | 36.810 | 163 | 94 | 4 | 270 | 432 | 318 | 471 | 3.14e-26 | 111 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05995.t1 | AT5G41410 | 45.209 | 407 | 143 | 11 | 100 | 432 | 38 | 438 | 7.71e-88 | 279 |
| MS.gene05995.t1 | AT4G36870 | 55.230 | 239 | 95 | 3 | 201 | 432 | 312 | 545 | 3.04e-80 | 258 |
| MS.gene05995.t1 | AT4G36870 | 55.462 | 238 | 94 | 3 | 201 | 431 | 312 | 544 | 6.21e-80 | 258 |
| MS.gene05995.t1 | AT2G23760 | 53.782 | 238 | 107 | 1 | 198 | 432 | 234 | 471 | 4.16e-79 | 257 |
| MS.gene05995.t1 | AT2G23760 | 53.782 | 238 | 107 | 1 | 198 | 432 | 234 | 471 | 4.16e-79 | 257 |
| MS.gene05995.t1 | AT2G23760 | 53.782 | 238 | 107 | 1 | 198 | 432 | 234 | 471 | 4.16e-79 | 257 |
| MS.gene05995.t1 | AT4G36870 | 55.230 | 239 | 95 | 3 | 201 | 432 | 312 | 545 | 1.90e-78 | 258 |
| MS.gene05995.t1 | AT4G36870 | 55.230 | 239 | 95 | 3 | 201 | 432 | 312 | 545 | 1.90e-78 | 258 |
| MS.gene05995.t1 | AT2G23760 | 44.138 | 290 | 107 | 2 | 198 | 432 | 234 | 523 | 7.69e-69 | 231 |
| MS.gene05995.t1 | AT4G34610 | 46.595 | 279 | 132 | 3 | 162 | 433 | 94 | 362 | 1.23e-65 | 219 |
| MS.gene05995.t1 | AT4G34610 | 46.595 | 279 | 132 | 3 | 162 | 433 | 94 | 362 | 1.23e-65 | 219 |
| MS.gene05995.t1 | AT4G34610 | 46.595 | 279 | 132 | 3 | 162 | 433 | 94 | 362 | 1.23e-65 | 219 |
| MS.gene05995.t1 | AT4G34610 | 46.595 | 279 | 132 | 3 | 162 | 433 | 94 | 362 | 1.23e-65 | 219 |
| MS.gene05995.t1 | AT1G19700 | 49.569 | 232 | 113 | 3 | 205 | 433 | 169 | 399 | 4.42e-64 | 215 |
| MS.gene05995.t1 | AT1G19700 | 49.569 | 232 | 113 | 3 | 205 | 433 | 169 | 399 | 4.42e-64 | 215 |
| MS.gene05995.t1 | AT1G19700 | 49.569 | 232 | 113 | 3 | 205 | 433 | 169 | 399 | 4.42e-64 | 215 |
| MS.gene05995.t1 | AT1G19700 | 49.569 | 232 | 113 | 3 | 205 | 433 | 169 | 399 | 4.42e-64 | 215 |
| MS.gene05995.t1 | AT1G19700 | 49.569 | 232 | 113 | 3 | 205 | 433 | 169 | 399 | 4.42e-64 | 215 |
| MS.gene05995.t1 | AT1G75410 | 49.573 | 234 | 103 | 5 | 205 | 433 | 171 | 394 | 5.29e-64 | 211 |
| MS.gene05995.t1 | AT2G16400 | 49.785 | 233 | 102 | 4 | 202 | 433 | 115 | 333 | 3.26e-63 | 211 |
| MS.gene05995.t1 | AT1G75410 | 49.351 | 231 | 108 | 4 | 205 | 433 | 171 | 394 | 4.61e-63 | 212 |
| MS.gene05995.t1 | AT1G75410 | 49.351 | 231 | 108 | 4 | 205 | 433 | 171 | 394 | 4.61e-63 | 212 |
| MS.gene05995.t1 | AT2G35940 | 49.402 | 251 | 99 | 6 | 202 | 432 | 190 | 432 | 1.18e-62 | 214 |
| MS.gene05995.t1 | AT2G35940 | 49.402 | 251 | 99 | 6 | 202 | 432 | 190 | 432 | 1.18e-62 | 214 |
| MS.gene05995.t1 | AT2G35940 | 49.402 | 251 | 99 | 6 | 202 | 432 | 190 | 432 | 1.18e-62 | 214 |
| MS.gene05995.t1 | AT1G75430 | 42.781 | 187 | 97 | 3 | 255 | 432 | 64 | 249 | 3.43e-45 | 159 |
| MS.gene05995.t1 | AT2G27220 | 38.496 | 226 | 107 | 4 | 207 | 432 | 82 | 275 | 6.66e-43 | 156 |
| MS.gene05995.t1 | AT2G27220 | 38.496 | 226 | 107 | 4 | 207 | 432 | 82 | 275 | 6.66e-43 | 156 |
| MS.gene05995.t1 | AT5G02030 | 40.664 | 241 | 119 | 5 | 201 | 432 | 170 | 395 | 1.50e-41 | 155 |
| MS.gene05995.t1 | AT2G27990 | 38.489 | 278 | 136 | 7 | 162 | 432 | 222 | 471 | 2.74e-41 | 154 |
| MS.gene05995.t1 | AT2G27220 | 35.656 | 244 | 107 | 5 | 207 | 432 | 82 | 293 | 4.87e-39 | 146 |
| MS.gene05995.t1 | AT1G75430 | 41.566 | 166 | 87 | 3 | 255 | 411 | 64 | 228 | 1.05e-35 | 133 |
| MS.gene05995.t1 | AT2G27990 | 36.187 | 257 | 129 | 7 | 162 | 411 | 222 | 450 | 1.41e-31 | 125 |
| MS.gene05995.t1 | AT4G32980 | 31.897 | 232 | 145 | 4 | 201 | 432 | 201 | 419 | 1.22e-26 | 112 |
| MS.gene05995.t1 | AT4G32980 | 31.897 | 232 | 145 | 4 | 201 | 432 | 201 | 419 | 1.22e-26 | 112 |
Find 68 sgRNAs with CRISPR-Local
Find 108 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGACGTTGATAAGCATATTT+TGG | 0.179512 | 4.1:-5487154 | MS.gene05995:CDS |
| AACGTTCTGTTTCAATTCTC+AGG | 0.263185 | 4.1:-5487769 | MS.gene05995:CDS |
| CTGTTTCAATTCTCAGGGCT+TGG | 0.264891 | 4.1:-5487763 | MS.gene05995:CDS |
| GTTTCACCCTTTGTTGTTCC+AGG | 0.285076 | 4.1:+5487896 | None:intergenic |
| TCAGCAAACCCTTCCTCTAT+TGG | 0.320628 | 4.1:-5488814 | MS.gene05995:CDS |
| TTTGTTGTTCCAGGTGCAAC+AGG | 0.331439 | 4.1:+5487905 | None:intergenic |
| TGCGAAAGTTTATTCAGCTT+TGG | 0.371886 | 4.1:-5488020 | MS.gene05995:CDS |
| TTTGAAGCTGTAGCTGGAAA+TGG | 0.404194 | 4.1:-5488046 | MS.gene05995:CDS |
| ATAATATTTAGGTTGATAGA+AGG | 0.409270 | 4.1:-5488111 | MS.gene05995:intron |
| AGTTCAACAATAAGCAAAGT+TGG | 0.410232 | 4.1:-5488609 | MS.gene05995:CDS |
| AAGATGTTGTTGATGTTGTT+TGG | 0.412598 | 4.1:+5489176 | None:intergenic |
| TGAAATCTTGATGTTGTTGT+TGG | 0.430842 | 4.1:+5489019 | None:intergenic |
| GTAGTGAGATTAAACATCTC+TGG | 0.433803 | 4.1:+5489222 | None:intergenic |
| GGCTTCTTGAGAGACCGGTT+TGG | 0.434607 | 4.1:+5487127 | None:intergenic |
| TGGATTTGTGTTTGAATCGT+TGG | 0.441048 | 4.1:+5489261 | None:intergenic |
| ATATGCTTATCAACGTCGCT+TGG | 0.454930 | 4.1:+5487159 | None:intergenic |
| AATCATCATTTACAAGATCA+AGG | 0.456108 | 4.1:-5488760 | MS.gene05995:CDS |
| TCATCATTTGAAGCTGTAGC+TGG | 0.459401 | 4.1:-5488052 | MS.gene05995:CDS |
| GAGATGTTTAATCTCACTAC+AGG | 0.460320 | 4.1:-5489219 | MS.gene05995:CDS |
| TTCTTGAGAGACCGGTTTGG+CGG | 0.471377 | 4.1:+5487130 | None:intergenic |
| ATGTGGAAAACAAATTTCTC+AGG | 0.472948 | 4.1:-5489111 | MS.gene05995:CDS |
| GTTCAACAATAAGCAAAGTT+GGG | 0.473195 | 4.1:-5488608 | MS.gene05995:CDS |
| TCTTGAGAGACCGGTTTGGC+GGG | 0.473357 | 4.1:+5487131 | None:intergenic |
| TGCCTGGCTTCTTGAGAGAC+CGG | 0.474444 | 4.1:+5487122 | None:intergenic |
| TATGCTTATCAACGTCGCTT+GGG | 0.485472 | 4.1:+5487160 | None:intergenic |
| AGAATTGAAACAGAACGTTC+AGG | 0.492761 | 4.1:+5487773 | None:intergenic |
| AAAAGATTGTAAACCAATAG+AGG | 0.498080 | 4.1:+5488801 | None:intergenic |
| ACTACAGGGATGGAGATGAT+AGG | 0.502219 | 4.1:-5489204 | MS.gene05995:CDS |
| TCATTGAGAAGTTCTTGTGC+TGG | 0.509475 | 4.1:+5488694 | None:intergenic |
| CTGGATCCGACACAAAGCCT+TGG | 0.517070 | 4.1:+5489241 | None:intergenic |
| ACGTTCTGTTTCAATTCTCA+GGG | 0.517994 | 4.1:-5487768 | MS.gene05995:CDS |
| TTACAAGATCAAGGGTATCA+AGG | 0.518553 | 4.1:-5488751 | MS.gene05995:CDS |
| TCAAACAACAAGAAAAGCAA+TGG | 0.524152 | 4.1:-5487939 | MS.gene05995:CDS |
| ACATGATGGAAACACATCCT+TGG | 0.528940 | 4.1:-5487814 | MS.gene05995:CDS |
| ATAATATACCTCTTCTAGCA+TGG | 0.533662 | 4.1:+5488486 | None:intergenic |
| AACCGGTCTCTCAAGAAGCC+AGG | 0.535546 | 4.1:-5487124 | MS.gene05995:CDS |
| GTTGCACCTGGAACAACAAA+GGG | 0.538924 | 4.1:-5487902 | MS.gene05995:CDS |
| CAAACAACAAGAAAAGCAAT+GGG | 0.541294 | 4.1:-5487938 | MS.gene05995:CDS |
| GATTGTAAACCAATAGAGGA+AGG | 0.551563 | 4.1:+5488805 | None:intergenic |
| AGCACTATTGTAATCAAATG+AGG | 0.555931 | 4.1:-5488084 | MS.gene05995:CDS |
| GGTCTTTCATTACCTTCACA+AGG | 0.569310 | 4.1:+5488865 | None:intergenic |
| ATTTCAACAAATCAACATGA+TGG | 0.573334 | 4.1:-5487828 | MS.gene05995:CDS |
| TGTTGCACCTGGAACAACAA+AGG | 0.574394 | 4.1:-5487903 | MS.gene05995:CDS |
| GTTTAATCTCACTACAGGGA+TGG | 0.583583 | 4.1:-5489214 | MS.gene05995:CDS |
| GAAGATGACAAAACATCAAG+TGG | 0.589082 | 4.1:-5489300 | MS.gene05995:CDS |
| GCTCCTTTCCATGCTAGAAG+AGG | 0.590546 | 4.1:-5488494 | MS.gene05995:intron |
| AAACTAAGTCAACAACATGT+TGG | 0.592199 | 4.1:-5489087 | MS.gene05995:CDS |
| ATCATCATTTACAAGATCAA+GGG | 0.598993 | 4.1:-5488759 | MS.gene05995:CDS |
| ATTGTAAACCAATAGAGGAA+GGG | 0.599402 | 4.1:+5488806 | None:intergenic |
| ATACCTCTTCTAGCATGGAA+AGG | 0.599613 | 4.1:+5488491 | None:intergenic |
| TTGTTGTTCCAGGTGCAACA+GGG | 0.600884 | 4.1:+5487906 | None:intergenic |
| GAGAGTGAAAGTCCTTGACT+TGG | 0.606569 | 4.1:+5488844 | None:intergenic |
| ATTCATCATCTTCACATCAG+TGG | 0.610423 | 4.1:-5488924 | MS.gene05995:CDS |
| GTCTTTCATTACCTTCACAA+GGG | 0.619695 | 4.1:+5488866 | None:intergenic |
| ACACAACAAACTCTGTCATG+TGG | 0.622405 | 4.1:-5489128 | MS.gene05995:CDS |
| AGACCACGTTGAGGTCTCCA+AGG | 0.624695 | 4.1:+5487797 | None:intergenic |
| CAACAAAGGGTGAAACACCT+AGG | 0.627180 | 4.1:-5487889 | MS.gene05995:CDS |
| GATGACAAAACATCAAGTGG+TGG | 0.632307 | 4.1:-5489297 | MS.gene05995:CDS |
| ACGATTCAAACACAAATCCA+AGG | 0.635087 | 4.1:-5489258 | MS.gene05995:CDS |
| TGGGAAGATGATAACAACAA+TGG | 0.648007 | 4.1:-5488589 | MS.gene05995:CDS |
| GGTAATGAAAGACCAAGTCA+AGG | 0.652296 | 4.1:-5488856 | MS.gene05995:CDS |
| ACAAATCCAAGGCTTTGTGT+CGG | 0.652705 | 4.1:-5489247 | MS.gene05995:CDS |
| GAAGATGATAACAACAATGG+TGG | 0.654808 | 4.1:-5488586 | MS.gene05995:CDS |
| TGATCAGAATCTAAACAACA+TGG | 0.698586 | 4.1:-5488974 | MS.gene05995:CDS |
| AGATGTTTAATCTCACTACA+GGG | 0.700473 | 4.1:-5489218 | MS.gene05995:CDS |
| CAATTCAACAAACTCTACAG+AGG | 0.717090 | 4.1:+5488534 | None:intergenic |
| CATCCTTGGAGACCTCAACG+TGG | 0.740668 | 4.1:-5487800 | MS.gene05995:CDS |
| CGTTCAGGAAGACCACGTTG+AGG | 0.743992 | 4.1:+5487788 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTGTGTATAATAATATTT+AGG | - | chr4.1:5488315-5488334 | MS.gene05995:intron | 10.0% |
| !! | ATGAAGAAAAAAAAGAATTA+CGG | + | chr4.1:5488721-5488740 | None:intergenic | 15.0% |
| !! | CAAAAAATAAAAACAACTAT+TGG | - | chr4.1:5488857-5488876 | MS.gene05995:CDS | 15.0% |
| !! | TTATGACTTGAAATAAATTA+AGG | + | chr4.1:5488049-5488068 | None:intergenic | 15.0% |
| !!! | GTTGTTTTTATTTTTTGAAA+TGG | + | chr4.1:5488854-5488873 | None:intergenic | 15.0% |
| !!! | TACTTCTTTTTATTTTTATG+TGG | - | chr4.1:5489103-5489122 | MS.gene05995:CDS | 15.0% |
| !! | TAAATAATTCTTCCTTTGTA+GGG | - | chr4.1:5489129-5489148 | MS.gene05995:CDS | 20.0% |
| !! | TACAAAGGAAGAATTATTTA+AGG | + | chr4.1:5489129-5489148 | None:intergenic | 20.0% |
| !! | TTAAAAAGTTTCAATTGTCA+CGG | + | chr4.1:5488186-5488205 | None:intergenic | 20.0% |
| !! | TTAAATAATTCTTCCTTTGT+AGG | - | chr4.1:5489128-5489147 | MS.gene05995:CDS | 20.0% |
| !! | TTCTAATTCTATTAGAAGTA+AGG | - | chr4.1:5488792-5488811 | MS.gene05995:CDS | 20.0% |
| !!! | AGTTTTCATCTTTATTTCTA+TGG | - | chr4.1:5488243-5488262 | MS.gene05995:intron | 20.0% |
| !!! | ATAATATTTAGGTTGATAGA+AGG | - | chr4.1:5488326-5488345 | MS.gene05995:intron | 20.0% |
| !!! | ATGATAGAAATTTTCATTCA+TGG | + | chr4.1:5487396-5487415 | None:intergenic | 20.0% |
| !!! | TGAAAACTAACAGTTTTTAT+TGG | + | chr4.1:5488231-5488250 | None:intergenic | 20.0% |
| ! | AAAAGATTGTAAACCAATAG+AGG | + | chr4.1:5487639-5487658 | None:intergenic | 25.0% |
| ! | AATCATCATTTACAAGATCA+AGG | - | chr4.1:5487677-5487696 | MS.gene05995:intron | 25.0% |
| ! | AATTAATATATGACCTTGTG+TGG | + | chr4.1:5489218-5489237 | None:intergenic | 25.0% |
| ! | ACAACATACATATGAAAAGA+TGG | + | chr4.1:5489014-5489033 | None:intergenic | 25.0% |
| ! | ATCATCATTTACAAGATCAA+GGG | - | chr4.1:5487678-5487697 | MS.gene05995:intron | 25.0% |
| ! | ATTTCAACAAATCAACATGA+TGG | - | chr4.1:5488609-5488628 | MS.gene05995:CDS | 25.0% |
| ! | GAAACTAACAAAAAATGCTT+AGG | + | chr4.1:5488971-5488990 | None:intergenic | 25.0% |
| ! | TAAAAAGTTTCAATTGTCAC+GGG | + | chr4.1:5488185-5488204 | None:intergenic | 25.0% |
| ! | TATTGGTAAGAAAAGGAAAA+AGG | + | chr4.1:5488214-5488233 | None:intergenic | 25.0% |
| !! | AATCAAAGACTCTTAACTTT+TGG | - | chr4.1:5488067-5488086 | MS.gene05995:CDS | 25.0% |
| !! | CAGTTTTTATTGGTAAGAAA+AGG | + | chr4.1:5488221-5488240 | None:intergenic | 25.0% |
| !!! | ATTTTAGGTGTTTGAAAGAT+GGG | - | chr4.1:5488461-5488480 | MS.gene05995:intron | 25.0% |
| !!! | TTTCATCTTTATTTCTATGG+TGG | - | chr4.1:5488246-5488265 | MS.gene05995:intron | 25.0% |
| AAAAAGTTTCAATTGTCACG+GGG | + | chr4.1:5488184-5488203 | None:intergenic | 30.0% | |
| AAACTAAGTCAACAACATGT+TGG | - | chr4.1:5487350-5487369 | MS.gene05995:intron | 30.0% | |
| AAGATGTTGTTGATGTTGTT+TGG | + | chr4.1:5487264-5487283 | None:intergenic | 30.0% | |
| AGATGTTTAATCTCACTACA+GGG | - | chr4.1:5487219-5487238 | MS.gene05995:intron | 30.0% | |
| AGCACTATTGTAATCAAATG+AGG | - | chr4.1:5488353-5488372 | MS.gene05995:intron | 30.0% | |
| AGTTCAACAATAAGCAAAGT+TGG | - | chr4.1:5487828-5487847 | MS.gene05995:CDS | 30.0% | |
| ATAATATACCTCTTCTAGCA+TGG | + | chr4.1:5487954-5487973 | None:intergenic | 30.0% | |
| ATGAAAAGATGGAATCTGAA+TGG | + | chr4.1:5489003-5489022 | None:intergenic | 30.0% | |
| ATGTGGAAAACAAATTTCTC+AGG | - | chr4.1:5487326-5487345 | MS.gene05995:intron | 30.0% | |
| ATTGTAAACCAATAGAGGAA+GGG | + | chr4.1:5487634-5487653 | None:intergenic | 30.0% | |
| CAAACAACAAGAAAAGCAAT+GGG | - | chr4.1:5488499-5488518 | MS.gene05995:CDS | 30.0% | |
| GTTCAACAATAAGCAAAGTT+GGG | - | chr4.1:5487829-5487848 | MS.gene05995:CDS | 30.0% | |
| TCAAACAACAAGAAAAGCAA+TGG | - | chr4.1:5488498-5488517 | MS.gene05995:CDS | 30.0% | |
| TGAAATCTTGATGTTGTTGT+TGG | + | chr4.1:5487421-5487440 | None:intergenic | 30.0% | |
| TGATCAGAATCTAAACAACA+TGG | - | chr4.1:5487463-5487482 | MS.gene05995:intron | 30.0% | |
| ! | AAGCTATGTCAAGACATTTT+AGG | - | chr4.1:5488446-5488465 | MS.gene05995:intron | 30.0% |
| ! | ATGAGATTGGTGTCTTAATT+TGG | - | chr4.1:5488102-5488121 | MS.gene05995:CDS | 30.0% |
| !! | ATGGTTTTTGAAGAAGAAGA+GGG | + | chr4.1:5487377-5487396 | None:intergenic | 30.0% |
| !! | CATTTTAGGTGTTTGAAAGA+TGG | - | chr4.1:5488460-5488479 | MS.gene05995:intron | 30.0% |
| !! | CTATCAAGTATTTTAAGCCT+AGG | + | chr4.1:5488568-5488587 | None:intergenic | 30.0% |
| AACGTTCTGTTTCAATTCTC+AGG | - | chr4.1:5488668-5488687 | MS.gene05995:CDS | 35.0% | |
| AACTATTGGCAGTTGTGTTA+TGG | - | chr4.1:5488871-5488890 | MS.gene05995:CDS | 35.0% | |
| AAGAAGAAATGACCCTACAA+AGG | + | chr4.1:5489144-5489163 | None:intergenic | 35.0% | |
| ACGATTCAAACACAAATCCA+AGG | - | chr4.1:5487179-5487198 | MS.gene05995:intron | 35.0% | |
| ACGTTCTGTTTCAATTCTCA+GGG | - | chr4.1:5488669-5488688 | MS.gene05995:CDS | 35.0% | |
| AGAATTGAAACAGAACGTTC+AGG | + | chr4.1:5488667-5488686 | None:intergenic | 35.0% | |
| ATTCATCATCTTCACATCAG+TGG | - | chr4.1:5487513-5487532 | MS.gene05995:intron | 35.0% | |
| CAATTCAACAAACTCTACAG+AGG | + | chr4.1:5487906-5487925 | None:intergenic | 35.0% | |
| GAAGATGACAAAACATCAAG+TGG | - | chr4.1:5487137-5487156 | MS.gene05995:CDS | 35.0% | |
| GAAGATGATAACAACAATGG+TGG | - | chr4.1:5487851-5487870 | MS.gene05995:CDS | 35.0% | |
| GAGATGTTTAATCTCACTAC+AGG | - | chr4.1:5487218-5487237 | MS.gene05995:intron | 35.0% | |
| GATTGTAAACCAATAGAGGA+AGG | + | chr4.1:5487635-5487654 | None:intergenic | 35.0% | |
| GTAGTGAGATTAAACATCTC+TGG | + | chr4.1:5487218-5487237 | None:intergenic | 35.0% | |
| GTCTTTCATTACCTTCACAA+GGG | + | chr4.1:5487574-5487593 | None:intergenic | 35.0% | |
| TGCGAAAGTTTATTCAGCTT+TGG | - | chr4.1:5488417-5488436 | MS.gene05995:intron | 35.0% | |
| TGGATTTGTGTTTGAATCGT+TGG | + | chr4.1:5487179-5487198 | None:intergenic | 35.0% | |
| TGGGAAGATGATAACAACAA+TGG | - | chr4.1:5487848-5487867 | MS.gene05995:CDS | 35.0% | |
| !! | CATGGTTTTTGAAGAAGAAG+AGG | + | chr4.1:5487378-5487397 | None:intergenic | 35.0% |
| !! | CGACGTTGATAAGCATATTT+TGG | - | chr4.1:5489283-5489302 | MS.gene05995:CDS | 35.0% |
| !! | GTTGAAGTAGTTGATGAGAT+TGG | - | chr4.1:5488089-5488108 | MS.gene05995:CDS | 35.0% |
| !! | TTACAAGATCAAGGGTATCA+AGG | - | chr4.1:5487686-5487705 | MS.gene05995:intron | 35.0% |
| ACACAACAAACTCTGTCATG+TGG | - | chr4.1:5487309-5487328 | MS.gene05995:intron | 40.0% | |
| ATACCTCTTCTAGCATGGAA+AGG | + | chr4.1:5487949-5487968 | None:intergenic | 40.0% | |
| ATATGCTTATCAACGTCGCT+TGG | + | chr4.1:5489281-5489300 | None:intergenic | 40.0% | |
| GATGACAAAACATCAAGTGG+TGG | - | chr4.1:5487140-5487159 | MS.gene05995:CDS | 40.0% | |
| GGTAATGAAAGACCAAGTCA+AGG | - | chr4.1:5487581-5487600 | MS.gene05995:intron | 40.0% | |
| GGTCTTTCATTACCTTCACA+AGG | + | chr4.1:5487575-5487594 | None:intergenic | 40.0% | |
| GTTTAATCTCACTACAGGGA+TGG | - | chr4.1:5487223-5487242 | MS.gene05995:intron | 40.0% | |
| TAATTCATACGTGCCACACA+AGG | - | chr4.1:5489202-5489221 | MS.gene05995:CDS | 40.0% | |
| TATGCTTATCAACGTCGCTT+GGG | + | chr4.1:5489280-5489299 | None:intergenic | 40.0% | |
| TCATTGAGAAGTTCTTGTGC+TGG | + | chr4.1:5487746-5487765 | None:intergenic | 40.0% | |
| ! | ACAAATCCAAGGCTTTGTGT+CGG | - | chr4.1:5487190-5487209 | MS.gene05995:intron | 40.0% |
| ! | ACATGATGGAAACACATCCT+TGG | - | chr4.1:5488623-5488642 | MS.gene05995:CDS | 40.0% |
| ! | AGATGTGTTTTCCCTTGTGA+AGG | - | chr4.1:5487560-5487579 | MS.gene05995:intron | 40.0% |
| ! | TCATCATTTGAAGCTGTAGC+TGG | - | chr4.1:5488385-5488404 | MS.gene05995:intron | 40.0% |
| ! | TTTGAAGCTGTAGCTGGAAA+TGG | - | chr4.1:5488391-5488410 | MS.gene05995:intron | 40.0% |
| ACTACAGGGATGGAGATGAT+AGG | - | chr4.1:5487233-5487252 | MS.gene05995:intron | 45.0% | |
| CAACAAAGGGTGAAACACCT+AGG | - | chr4.1:5488548-5488567 | MS.gene05995:CDS | 45.0% | |
| CTGTTTCAATTCTCAGGGCT+TGG | - | chr4.1:5488674-5488693 | MS.gene05995:CDS | 45.0% | |
| GAGAGTGAAAGTCCTTGACT+TGG | + | chr4.1:5487596-5487615 | None:intergenic | 45.0% | |
| GTTGCACCTGGAACAACAAA+GGG | - | chr4.1:5488535-5488554 | MS.gene05995:CDS | 45.0% | |
| TCAGCAAACCCTTCCTCTAT+TGG | - | chr4.1:5487623-5487642 | MS.gene05995:intron | 45.0% | |
| TGTTGCACCTGGAACAACAA+AGG | - | chr4.1:5488534-5488553 | MS.gene05995:CDS | 45.0% | |
| TTTCAATTGTCACGGGGTGA+AGG | + | chr4.1:5488178-5488197 | None:intergenic | 45.0% | |
| ! | TTGTTGTTCCAGGTGCAACA+GGG | + | chr4.1:5488534-5488553 | None:intergenic | 45.0% |
| !! | GTTTCACCCTTTGTTGTTCC+AGG | + | chr4.1:5488544-5488563 | None:intergenic | 45.0% |
| !! | TTTGTTGTTCCAGGTGCAAC+AGG | + | chr4.1:5488535-5488554 | None:intergenic | 45.0% |
| !!! | TTTTTTTGTATAATTTTTAT+AGG | - | chr4.1:5489252-5489271 | MS.gene05995:CDS | 5.0% |
| GAAAAAGACCCTGTTGCACC+TGG | - | chr4.1:5488523-5488542 | MS.gene05995:CDS | 50.0% | |
| GCTCCTTTCCATGCTAGAAG+AGG | - | chr4.1:5487943-5487962 | MS.gene05995:CDS | 50.0% | |
| !! | TTCTTGAGAGACCGGTTTGG+CGG | + | chr4.1:5489310-5489329 | None:intergenic | 50.0% |
| !!! | CATATTTTGGCCCGCCAAAC+CGG | - | chr4.1:5489296-5489315 | MS.gene05995:CDS | 50.0% |
| AACCGGTCTCTCAAGAAGCC+AGG | - | chr4.1:5489313-5489332 | MS.gene05995:CDS | 55.0% | |
| AGACCACGTTGAGGTCTCCA+AGG | + | chr4.1:5488643-5488662 | None:intergenic | 55.0% | |
| CATCCTTGGAGACCTCAACG+TGG | - | chr4.1:5488637-5488656 | MS.gene05995:CDS | 55.0% | |
| CGTTCAGGAAGACCACGTTG+AGG | + | chr4.1:5488652-5488671 | None:intergenic | 55.0% | |
| CTGGATCCGACACAAAGCCT+TGG | + | chr4.1:5487199-5487218 | None:intergenic | 55.0% | |
| GGCTTCTTGAGAGACCGGTT+TGG | + | chr4.1:5489313-5489332 | None:intergenic | 55.0% | |
| TGCCTGGCTTCTTGAGAGAC+CGG | + | chr4.1:5489318-5489337 | None:intergenic | 55.0% | |
| !! | TCTTGAGAGACCGGTTTGGC+GGG | + | chr4.1:5489309-5489328 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 5487116 | 5489343 | 5487116 | ID=MS.gene05995 |
| chr4.1 | mRNA | 5487116 | 5489343 | 5487116 | ID=MS.gene05995.t1;Parent=MS.gene05995 |
| chr4.1 | exon | 5488495 | 5489343 | 5488495 | ID=MS.gene05995.t1.exon1;Parent=MS.gene05995.t1 |
| chr4.1 | CDS | 5488495 | 5489343 | 5488495 | ID=cds.MS.gene05995.t1;Parent=MS.gene05995.t1 |
| chr4.1 | exon | 5487740 | 5488122 | 5487740 | ID=MS.gene05995.t1.exon2;Parent=MS.gene05995.t1 |
| chr4.1 | CDS | 5487740 | 5488122 | 5487740 | ID=cds.MS.gene05995.t1;Parent=MS.gene05995.t1 |
| chr4.1 | exon | 5487116 | 5487185 | 5487116 | ID=MS.gene05995.t1.exon3;Parent=MS.gene05995.t1 |
| chr4.1 | CDS | 5487116 | 5487185 | 5487116 | ID=cds.MS.gene05995.t1;Parent=MS.gene05995.t1 |
| Gene Sequence |
| Protein sequence |
