Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65363.t1 | XP_003612352.1 | 89.2 | 461 | 44 | 4 | 1 | 461 | 1 | 455 | 6.80E-234 | 819.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65363.t1 | Q9BQ67 | 43.2 | 451 | 216 | 10 | 16 | 455 | 19 | 440 | 5.9e-85 | 316.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65363.t1 | G7K171 | 89.2 | 461 | 44 | 4 | 1 | 461 | 1 | 455 | 4.9e-234 | 819.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene07852 | MS.gene65363 | PPI |
| MS.gene53345 | MS.gene65363 | PPI |
| MS.gene26959 | MS.gene65363 | PPI |
| MS.gene011268 | MS.gene65363 | PPI |
| MS.gene053297 | MS.gene65363 | PPI |
| MS.gene052717 | MS.gene65363 | PPI |
| MS.gene65363 | MS.gene24284 | PPI |
| MS.gene27317 | MS.gene65363 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65363.t1 | MTR_5g024090 | 89.588 | 461 | 42 | 4 | 1 | 461 | 1 | 455 | 0.0 | 790 |
| MS.gene65363.t1 | MTR_8g080700 | 78.158 | 467 | 89 | 6 | 1 | 461 | 1 | 460 | 0.0 | 698 |
| MS.gene65363.t1 | MTR_4g096880 | 27.660 | 423 | 241 | 14 | 47 | 456 | 29 | 399 | 7.48e-35 | 135 |
| MS.gene65363.t1 | MTR_4g073080 | 30.820 | 305 | 170 | 11 | 152 | 451 | 109 | 377 | 2.87e-28 | 116 |
| MS.gene65363.t1 | MTR_2g039250 | 28.615 | 325 | 188 | 10 | 150 | 451 | 151 | 454 | 1.41e-26 | 112 |
| MS.gene65363.t1 | MTR_2g100090 | 26.706 | 337 | 189 | 14 | 150 | 451 | 110 | 423 | 3.80e-22 | 99.4 |
| MS.gene65363.t1 | MTR_2g016160 | 27.513 | 189 | 116 | 6 | 211 | 395 | 99 | 270 | 9.90e-13 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65363.t1 | AT2G19540 | 63.758 | 447 | 152 | 5 | 18 | 461 | 20 | 459 | 0.0 | 558 |
| MS.gene65363.t1 | AT5G58230 | 31.034 | 377 | 217 | 14 | 92 | 456 | 54 | 399 | 9.10e-39 | 145 |
| MS.gene65363.t1 | AT2G16780 | 30.421 | 309 | 183 | 9 | 147 | 451 | 105 | 385 | 4.88e-34 | 132 |
| MS.gene65363.t1 | AT4G35050 | 25.701 | 428 | 261 | 13 | 31 | 451 | 9 | 386 | 7.06e-34 | 132 |
| MS.gene65363.t1 | AT2G19520 | 26.380 | 326 | 197 | 9 | 150 | 451 | 157 | 463 | 2.56e-24 | 105 |
| MS.gene65363.t1 | AT4G29730 | 25.378 | 331 | 194 | 8 | 150 | 451 | 137 | 443 | 1.54e-21 | 97.4 |
| MS.gene65363.t1 | AT4G29730 | 25.000 | 312 | 182 | 7 | 150 | 433 | 137 | 424 | 2.97e-21 | 96.3 |
| MS.gene65363.t1 | AT4G29730 | 25.000 | 312 | 182 | 7 | 150 | 433 | 137 | 424 | 2.97e-21 | 96.3 |
| MS.gene65363.t1 | AT1G29260 | 26.455 | 189 | 118 | 6 | 211 | 395 | 98 | 269 | 7.16e-12 | 66.6 |
| MS.gene65363.t1 | AT4G34460 | 25.946 | 185 | 127 | 4 | 210 | 391 | 146 | 323 | 8.85e-12 | 67.0 |
| MS.gene65363.t1 | AT4G34460 | 25.946 | 185 | 127 | 4 | 210 | 391 | 146 | 323 | 8.99e-12 | 66.6 |
| MS.gene65363.t1 | AT4G34460 | 25.946 | 185 | 127 | 4 | 210 | 391 | 141 | 318 | 9.11e-12 | 67.0 |
| MS.gene65363.t1 | AT4G34460 | 25.946 | 185 | 127 | 4 | 210 | 391 | 84 | 261 | 1.11e-11 | 66.2 |
| MS.gene65363.t1 | AT5G13480 | 27.381 | 168 | 105 | 5 | 233 | 400 | 209 | 359 | 1.14e-11 | 67.4 |
| MS.gene65363.t1 | AT5G13480 | 27.381 | 168 | 105 | 5 | 233 | 400 | 221 | 371 | 1.15e-11 | 67.4 |
| MS.gene65363.t1 | AT5G13480 | 27.381 | 168 | 105 | 5 | 233 | 400 | 209 | 359 | 1.27e-11 | 67.4 |
| MS.gene65363.t1 | AT5G13480 | 27.381 | 168 | 105 | 5 | 233 | 400 | 232 | 382 | 1.31e-11 | 67.4 |
| MS.gene65363.t1 | AT3G63460 | 22.727 | 242 | 148 | 9 | 217 | 452 | 121 | 329 | 2.00e-11 | 67.0 |
| MS.gene65363.t1 | AT3G63460 | 22.727 | 242 | 148 | 9 | 217 | 452 | 121 | 329 | 2.02e-11 | 67.0 |
| MS.gene65363.t1 | AT3G63460 | 22.727 | 242 | 148 | 9 | 217 | 452 | 121 | 329 | 2.10e-11 | 67.0 |
Find 119 sgRNAs with CRISPR-Local
Find 301 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTAAAGTATCTAATATTTC+TGG | 0.117527 | 5.2:+15026546 | MS.gene65363:CDS |
| GGGTGCCAGTGCAGTTCTTT+AGG | 0.168274 | 5.2:-15030244 | None:intergenic |
| TTTAGACGCCAGTAGTTTAT+TGG | 0.214383 | 5.2:+15029224 | MS.gene65363:CDS |
| ATTGACCAAACTCCCTTTAC+TGG | 0.228674 | 5.2:+15028795 | MS.gene65363:CDS |
| ATATTGGATGGCCTTGTCTT+AGG | 0.248468 | 5.2:+15025969 | MS.gene65363:CDS |
| ACTATCATTCCAGGAATCTT+TGG | 0.249677 | 5.2:-15030265 | None:intergenic |
| GGTGCCAGTGCAGTTCTTTA+GGG | 0.253031 | 5.2:-15030243 | None:intergenic |
| AAACCTTCTTGGAATTCTAT+TGG | 0.254653 | 5.2:+15026519 | MS.gene65363:CDS |
| CTCCCCATGATGCACATATA+TGG | 0.259643 | 5.2:-15026853 | None:intergenic |
| TGGATAAAAGCATTGCAATA+TGG | 0.294456 | 5.2:+15029025 | MS.gene65363:CDS |
| TTCTTCAGTGCCACAGCTTC+CGG | 0.301659 | 5.2:+15025856 | MS.gene65363:CDS |
| AACCTTCTTGGAATTCTATT+GGG | 0.322573 | 5.2:+15026520 | MS.gene65363:CDS |
| CCCAGGCTGAGAAACCTTCT+TGG | 0.327782 | 5.2:+15026508 | MS.gene65363:intron |
| TTGCAGAGTCACCAGTTTCA+TGG | 0.337894 | 5.2:-15026596 | None:intergenic |
| AGTTGGGGAGGCAGATCTTC+AGG | 0.338811 | 5.2:-15030005 | None:intergenic |
| CACTGGCACCCAAAGATTCC+TGG | 0.354543 | 5.2:+15030256 | MS.gene65363:CDS |
| AATGAAGGAAAGCTTATATC+TGG | 0.359427 | 5.2:+15028611 | MS.gene65363:CDS |
| TCACCAGTTTCATGGTTGTT+AGG | 0.362574 | 5.2:-15026588 | None:intergenic |
| CCAGGTTGCCACACTTTAAC+CGG | 0.362889 | 5.2:-15025875 | None:intergenic |
| CCAAGGAGTTGATGTAGTTC+AGG | 0.372282 | 5.2:+15028529 | MS.gene65363:CDS |
| AAGATGAAGAAGGTGTTGTC+GGG | 0.385596 | 5.2:+15026655 | MS.gene65363:CDS |
| ACTACTGGCGTCTAAACTAT+TGG | 0.386386 | 5.2:-15029217 | None:intergenic |
| TCCACACACAGTGTACTTCA+TGG | 0.396819 | 5.2:+15026122 | MS.gene65363:CDS |
| CTATCATTCCAGGAATCTTT+GGG | 0.398142 | 5.2:-15030264 | None:intergenic |
| GTGCCTAACAACCATGAAAC+TGG | 0.401542 | 5.2:+15026585 | MS.gene65363:CDS |
| CAGGAGCCCGTACTTGTCCT+TGG | 0.404216 | 5.2:-15029986 | None:intergenic |
| TCCCCATGATGCACATATAT+GGG | 0.405787 | 5.2:-15026852 | None:intergenic |
| CTGGTGAATAAATAATAGTT+GGG | 0.415023 | 5.2:-15030021 | None:intergenic |
| TCATGATCTCAGATCGCTTA+AGG | 0.424334 | 5.2:+15029278 | MS.gene65363:CDS |
| GGATAAAAGCATTGCAATAT+GGG | 0.425531 | 5.2:+15029026 | MS.gene65363:CDS |
| GTAAAGTATCTAATATTTCT+GGG | 0.426041 | 5.2:+15026547 | MS.gene65363:CDS |
| CCTGGTGAATAAATAATAGT+TGG | 0.428338 | 5.2:-15030022 | None:intergenic |
| GCCAGTAGTTTATTGGCATC+TGG | 0.429779 | 5.2:+15029231 | MS.gene65363:CDS |
| TTTGTGGCATGGAGCGTATC+CGG | 0.429972 | 5.2:-15026826 | None:intergenic |
| CTCAAATGTTTGAAGGCATA+AGG | 0.430805 | 5.2:-15030315 | None:intergenic |
| CTCATGAAGGTTGTATCAAC+CGG | 0.432321 | 5.2:+15026807 | MS.gene65363:CDS |
| TATGTCCAGTAAAGGGAGTT+TGG | 0.438747 | 5.2:-15028800 | None:intergenic |
| AACTCCCTTTACTGGACATA+CGG | 0.442897 | 5.2:+15028803 | MS.gene65363:CDS |
| GCAGTAGATACTATCATTCC+AGG | 0.447643 | 5.2:-15030274 | None:intergenic |
| TGTAGAAAGGGACGAGGAAG+AGG | 0.460518 | 5.2:+15029941 | MS.gene65363:CDS |
| AATCCTTTGCCATAGAATAT+GGG | 0.473001 | 5.2:+15029911 | MS.gene65363:intron |
| TTGGCATCTGGTAGTGATGA+TGG | 0.473663 | 5.2:+15029243 | MS.gene65363:CDS |
| GAGGAAGTTGCCTGCAAAGT+AGG | 0.474817 | 5.2:-15026681 | None:intergenic |
| GAAGATGAAGAAGGTGTTGT+CGG | 0.483253 | 5.2:+15026654 | MS.gene65363:CDS |
| GCCCCATATATGTGCATCAT+GGG | 0.490939 | 5.2:+15026850 | MS.gene65363:CDS |
| TTTGTTTGCTTCTTGTTCTG+TGG | 0.493928 | 5.2:+15029005 | MS.gene65363:CDS |
| TGGATGTGATCGGATGCTTA+TGG | 0.494883 | 5.2:-15029705 | None:intergenic |
| CCTCGTCCCTTTCTACAGAT+AGG | 0.495464 | 5.2:-15029935 | None:intergenic |
| ATGAAGGTTATGCTATAGAC+TGG | 0.497227 | 5.2:+15028579 | MS.gene65363:CDS |
| CCAACTATTATTTATTCACC+AGG | 0.500322 | 5.2:+15030022 | MS.gene65363:CDS |
| CCGGTTAAAGTGTGGCAACC+TGG | 0.505159 | 5.2:+15025875 | MS.gene65363:CDS |
| TCTTCCAACTTGTCCACACC+AGG | 0.505184 | 5.2:-15025893 | None:intergenic |
| GGGTGCTCTCAAATGTTTGA+AGG | 0.507205 | 5.2:-15030322 | None:intergenic |
| TGAATGTATTGTCATGGAAC+AGG | 0.507712 | 5.2:+15029103 | MS.gene65363:CDS |
| CAATATGGGATACTCGTTGT+AGG | 0.507873 | 5.2:+15029040 | MS.gene65363:CDS |
| CACACAGTGTACTTCATGGC+AGG | 0.508453 | 5.2:+15026126 | MS.gene65363:CDS |
| ACAGAAATGCAAGGTGTCCA+AGG | 0.509506 | 5.2:+15028512 | MS.gene65363:CDS |
| CTAGAAACCAAGGACAAGTA+CGG | 0.511843 | 5.2:+15029979 | MS.gene65363:CDS |
| TATGGGACCTATCTGTAGAA+AGG | 0.512379 | 5.2:+15029928 | MS.gene65363:CDS |
| CAATAATAATATTTATCTGT+GGG | 0.519586 | 5.2:+15028746 | MS.gene65363:CDS |
| TGTGCATCATGGGGAGACTC+TGG | 0.522901 | 5.2:+15026860 | MS.gene65363:CDS |
| CCTGAACTACATCAACTCCT+TGG | 0.523733 | 5.2:-15028529 | None:intergenic |
| AGCCCCATATATGTGCATCA+TGG | 0.524674 | 5.2:+15026849 | MS.gene65363:CDS |
| GCAAACAAATTCTCCTCTGT+AGG | 0.525480 | 5.2:-15028991 | None:intergenic |
| GACTGGAGTCGTCAGAATGA+AGG | 0.526073 | 5.2:+15028596 | MS.gene65363:CDS |
| GATATTGTTCAAGACACCTC+AGG | 0.534595 | 5.2:+15026081 | MS.gene65363:CDS |
| CTACCCGTATGTCCAGTAAA+GGG | 0.534623 | 5.2:-15028807 | None:intergenic |
| ATGGGACCTATCTGTAGAAA+GGG | 0.534636 | 5.2:+15029929 | MS.gene65363:CDS |
| ACCAGATGCCAATAAACTAC+TGG | 0.537920 | 5.2:-15029232 | None:intergenic |
| GGGAGACTCTGGTCATGTGC+AGG | 0.540008 | 5.2:+15026871 | MS.gene65363:CDS |
| TTCTGGGAAGACACGTGAGC+CGG | 0.540677 | 5.2:+15026563 | MS.gene65363:CDS |
| GTTTCATGGTTGTTAGGCAC+CGG | 0.541099 | 5.2:-15026582 | None:intergenic |
| ACTACCCGTATGTCCAGTAA+AGG | 0.541370 | 5.2:-15028808 | None:intergenic |
| ATAGTATCTACTGCATCAGA+TGG | 0.552548 | 5.2:+15030283 | MS.gene65363:CDS |
| GCGAAAGAAGAAGCATTGAC+TGG | 0.554097 | 5.2:-15029739 | None:intergenic |
| GCAATAATAATATTTATCTG+TGG | 0.554630 | 5.2:+15028745 | MS.gene65363:CDS |
| CAAACAAATTCTCCTCTGTA+GGG | 0.564185 | 5.2:-15028990 | None:intergenic |
| TGAAGAGAGTTGTAAGCAGA+AGG | 0.566080 | 5.2:-15025938 | None:intergenic |
| TTCCATGTTGCAGCAGATGT+AGG | 0.568203 | 5.2:-15028771 | None:intergenic |
| ATCCCAATAGAATTCCAAGA+AGG | 0.572795 | 5.2:-15026522 | None:intergenic |
| GATGATAGTGAAGATGAAGA+AGG | 0.575436 | 5.2:+15026645 | MS.gene65363:CDS |
| GTTCGCACCTACAGTTGCGG+AGG | 0.578131 | 5.2:+15026780 | MS.gene65363:intron |
| TGAAACTGGTGACTCTGCAA+TGG | 0.580008 | 5.2:+15026599 | MS.gene65363:CDS |
| AGCCTACATCTGCTGCAACA+TGG | 0.586634 | 5.2:+15028769 | MS.gene65363:CDS |
| GTACTTCATGGCAGGGACAC+AGG | 0.587280 | 5.2:+15026134 | MS.gene65363:CDS |
| ATTGACTGGATTCCACTCAA+TGG | 0.589690 | 5.2:-15029725 | None:intergenic |
| TAGAAACCAAGGACAAGTAC+GGG | 0.590218 | 5.2:+15029980 | MS.gene65363:CDS |
| TTGCGGAGGGTAACTCATGA+AGG | 0.591600 | 5.2:+15026794 | MS.gene65363:CDS |
| TAAAGTGTGGCAACCTGGTG+TGG | 0.592539 | 5.2:+15025880 | MS.gene65363:CDS |
| TGAATAAATAATAGTTGGGG+AGG | 0.598369 | 5.2:-15030017 | None:intergenic |
| GCAACCTGGTGTGGACAAGT+TGG | 0.600154 | 5.2:+15025889 | MS.gene65363:CDS |
| AGAAAGGGACGAGGAAGAGG+AGG | 0.601145 | 5.2:+15029944 | MS.gene65363:CDS |
| CTGATGTGAATGTATTGTCA+TGG | 0.604527 | 5.2:+15029097 | MS.gene65363:CDS |
| TGGCATCTGGTAGTGATGAT+GGG | 0.604805 | 5.2:+15029244 | MS.gene65363:CDS |
| CACACTTTAACCGGAAGCTG+TGG | 0.608669 | 5.2:-15025866 | None:intergenic |
| TTACGTGAGCTGATTATCAG+AGG | 0.612783 | 5.2:-15029770 | None:intergenic |
| AATACCCTAAAGAACTGCAC+TGG | 0.613846 | 5.2:+15030239 | MS.gene65363:CDS |
| CACAGCTTCCGGTTAAAGTG+TGG | 0.618649 | 5.2:+15025867 | MS.gene65363:CDS |
| ACTCCCTTTACTGGACATAC+GGG | 0.621217 | 5.2:+15028804 | MS.gene65363:CDS |
| CCTATCTGTAGAAAGGGACG+AGG | 0.621911 | 5.2:+15029935 | MS.gene65363:CDS |
| CCCCATGATGCACATATATG+GGG | 0.623982 | 5.2:-15026851 | None:intergenic |
| TGTGCTATAAAAGTCAACAT+TGG | 0.624729 | 5.2:-15029069 | None:intergenic |
| ATCCGATCACATCCATTGAG+TGG | 0.636743 | 5.2:+15029713 | MS.gene65363:CDS |
| TATGGGATACTCGTTGTAGG+AGG | 0.638598 | 5.2:+15029043 | MS.gene65363:CDS |
| AGATGAAGAAGGTGTTGTCG+GGG | 0.641716 | 5.2:+15026656 | MS.gene65363:CDS |
| ACACAGTGTACTTCATGGCA+GGG | 0.642672 | 5.2:+15026127 | MS.gene65363:CDS |
| ATAGGAAGGGAAAGATCATG+TGG | 0.643718 | 5.2:+15029666 | MS.gene65363:intron |
| GCCATGAAGTACACTGTGTG+TGG | 0.644972 | 5.2:-15026123 | None:intergenic |
| TTCCACTCAATGGATGTGAT+CGG | 0.647949 | 5.2:-15029715 | None:intergenic |
| CCTGCAGTGGAGCCCTACAG+AGG | 0.652615 | 5.2:+15028978 | MS.gene65363:intron |
| TTCGCACCTACAGTTGCGGA+GGG | 0.656554 | 5.2:+15026781 | MS.gene65363:intron |
| GATGAAGAAGGTGTTGTCGG+GGG | 0.660596 | 5.2:+15026657 | MS.gene65363:CDS |
| TGGTGAATAAATAATAGTTG+GGG | 0.664659 | 5.2:-15030020 | None:intergenic |
| GAATTTATAGCTAGAAACCA+AGG | 0.672979 | 5.2:+15029969 | MS.gene65363:CDS |
| CCCCATATATGTGCATCATG+GGG | 0.675644 | 5.2:+15026851 | MS.gene65363:CDS |
| CTAGCAGAGACAGAAATGCA+AGG | 0.682289 | 5.2:+15028503 | MS.gene65363:CDS |
| TGACTCTGCAATGGATAGTG+AGG | 0.687260 | 5.2:+15026608 | MS.gene65363:CDS |
| TATGGAAATTACCTAAGACA+AGG | 0.706154 | 5.2:-15025980 | None:intergenic |
| TAGTGAGGACAGTGACAGTG+AGG | 0.744988 | 5.2:+15026623 | MS.gene65363:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGCAAAAAATTAAATCATA+AGG | - | chr5.2:15026910-15026929 | None:intergenic | 15.0% |
| !! | CAATAATAATATTTATCTGT+GGG | + | chr5.2:15028746-15028765 | MS.gene65363:CDS | 15.0% |
| !! | GTTATGTTAAAATCAAATAT+AGG | - | chr5.2:15027152-15027171 | None:intergenic | 15.0% |
| !! | TCATCTTTAATAAATAACAA+AGG | - | chr5.2:15029623-15029642 | None:intergenic | 15.0% |
| !!! | TACTTTAAAAAATGCATTAA+TGG | - | chr5.2:15029506-15029525 | None:intergenic | 15.0% |
| !!! | TTAAATTATGAACAACTTTT+TGG | - | chr5.2:15027356-15027375 | None:intergenic | 15.0% |
| !!! | TTATACAAAAGTATATGAAT+CGG | - | chr5.2:15028424-15028443 | None:intergenic | 15.0% |
| !! | AAAGGTAATGATAAAGAAAA+AGG | - | chr5.2:15029872-15029891 | None:intergenic | 20.0% |
| !! | AAGCAAAAAATAATATACCT+TGG | - | chr5.2:15025736-15025755 | None:intergenic | 20.0% |
| !! | AAGGTAATGATAAAGAAAAA+GGG | - | chr5.2:15029871-15029890 | None:intergenic | 20.0% |
| !! | ACCTTAACTAAGTAAATATT+CGG | + | chr5.2:15027266-15027285 | MS.gene65363:intron | 20.0% |
| !! | AGTTGATCTTACTAATAATT+TGG | + | chr5.2:15026753-15026772 | MS.gene65363:intron | 20.0% |
| !! | CTTCATATATGATAAAAATG+AGG | + | chr5.2:15028257-15028276 | MS.gene65363:intron | 20.0% |
| !! | GCAATAATAATATTTATCTG+TGG | + | chr5.2:15028745-15028764 | MS.gene65363:CDS | 20.0% |
| !! | TAATAAAAACTCAAATGAAG+AGG | - | chr5.2:15026703-15026722 | None:intergenic | 20.0% |
| !!! | ATTTCATTTAACTTGAAACA+GGG | + | chr5.2:15030211-15030230 | MS.gene65363:intron | 20.0% |
| !!! | ATTTTGATTCTAATGAGTTA+AGG | + | chr5.2:15027861-15027880 | MS.gene65363:intron | 20.0% |
| !!! | CAAAACTTTTAAAAATCCAA+AGG | - | chr5.2:15029890-15029909 | None:intergenic | 20.0% |
| !!! | GCTAAAATTTAAGAATTTTC+AGG | - | chr5.2:15028322-15028341 | None:intergenic | 20.0% |
| !!! | GTAAAGTATCTAATATTTCT+GGG | + | chr5.2:15026547-15026566 | MS.gene65363:CDS | 20.0% |
| !!! | TATTGATACAAGTTCTAAAA+GGG | - | chr5.2:15027195-15027214 | None:intergenic | 20.0% |
| !!! | TATTTCATTTAACTTGAAAC+AGG | + | chr5.2:15030210-15030229 | MS.gene65363:intron | 20.0% |
| !!! | TCAAAATGACAAAATCTTTT+TGG | - | chr5.2:15027848-15027867 | None:intergenic | 20.0% |
| !!! | TGATTTAATTTTTTGCTTTG+TGG | + | chr5.2:15026912-15026931 | MS.gene65363:intron | 20.0% |
| !!! | TGTAAAGTATCTAATATTTC+TGG | + | chr5.2:15026546-15026565 | MS.gene65363:CDS | 20.0% |
| !!! | TTATTGATACAAGTTCTAAA+AGG | - | chr5.2:15027196-15027215 | None:intergenic | 20.0% |
| !!! | TTCAAGTTAAATGAAATAAG+AGG | - | chr5.2:15030208-15030227 | None:intergenic | 20.0% |
| !!! | TTTTTCTTTATCATTACCTT+TGG | + | chr5.2:15029871-15029890 | MS.gene65363:intron | 20.0% |
| ! | AAGTAATGAATTTGTAGATC+TGG | + | chr5.2:15028456-15028475 | MS.gene65363:intron | 25.0% |
| ! | AAGTTTAAGCACAAAAATGA+AGG | + | chr5.2:15028563-15028582 | MS.gene65363:CDS | 25.0% |
| ! | AATAACAAAGGCAAAATAGT+TGG | - | chr5.2:15029611-15029630 | None:intergenic | 25.0% |
| ! | AATATGTTGTTAGGACATAA+GGG | - | chr5.2:15029388-15029407 | None:intergenic | 25.0% |
| ! | ACCGAATATTTACTTAGTTA+AGG | - | chr5.2:15027270-15027289 | None:intergenic | 25.0% |
| ! | ACTATTCATTACCAATCAAA+TGG | + | chr5.2:15026225-15026244 | MS.gene65363:intron | 25.0% |
| ! | ACTTAATATGTTGAGAAAAG+TGG | - | chr5.2:15030058-15030077 | None:intergenic | 25.0% |
| ! | AGTAATGAATTTGTAGATCT+GGG | + | chr5.2:15028457-15028476 | MS.gene65363:intron | 25.0% |
| ! | ATAAGGGAAAAAGAATAATC+AGG | - | chr5.2:15029372-15029391 | None:intergenic | 25.0% |
| ! | ATTAATGGTACTTGATTCAA+AGG | - | chr5.2:15029491-15029510 | None:intergenic | 25.0% |
| ! | ATTTCAAAGATTAACTTACG+AGG | - | chr5.2:15028039-15028058 | None:intergenic | 25.0% |
| ! | CAACATGAAGAGATATATAA+TGG | - | chr5.2:15029169-15029188 | None:intergenic | 25.0% |
| ! | CAGAAATTAAACAAAACGTA+TGG | - | chr5.2:15026001-15026020 | None:intergenic | 25.0% |
| ! | CATATATGAAGAAATATACC+TGG | - | chr5.2:15028248-15028267 | None:intergenic | 25.0% |
| ! | CTGGTGAATAAATAATAGTT+GGG | - | chr5.2:15030024-15030043 | None:intergenic | 25.0% |
| ! | TAATATGTTGTTAGGACATA+AGG | - | chr5.2:15029389-15029408 | None:intergenic | 25.0% |
| ! | TCAACTTAAATTTATCTGAG+AGG | + | chr5.2:15029414-15029433 | MS.gene65363:intron | 25.0% |
| ! | TGCTTTAGTTATGTCATATT+TGG | + | chr5.2:15029337-15029356 | MS.gene65363:intron | 25.0% |
| ! | TGGTGAATAAATAATAGTTG+GGG | - | chr5.2:15030023-15030042 | None:intergenic | 25.0% |
| !! | ATAAAGCCTTAAAACTTGTT+AGG | - | chr5.2:15029844-15029863 | None:intergenic | 25.0% |
| !! | ATGTGTTGTTATAAACCAAA+AGG | - | chr5.2:15027054-15027073 | None:intergenic | 25.0% |
| !! | CAAATTCCTAACAAGTTTTA+AGG | + | chr5.2:15029835-15029854 | MS.gene65363:intron | 25.0% |
| !! | TGATGATGTAATATGTTGTT+AGG | - | chr5.2:15029397-15029416 | None:intergenic | 25.0% |
| !!! | AAATGCATTATTTTGTGGAT+AGG | + | chr5.2:15029648-15029667 | MS.gene65363:intron | 25.0% |
| !!! | AATATACCTTGGTCTTTTTT+TGG | - | chr5.2:15025725-15025744 | None:intergenic | 25.0% |
| !!! | CGACTTTATTGTTTTAGTTA+CGG | + | chr5.2:15027949-15027968 | MS.gene65363:intron | 25.0% |
| !!! | GAATTTTCAGGAATTTCAAT+AGG | - | chr5.2:15028310-15028329 | None:intergenic | 25.0% |
| !!! | GAGAATTTTTTGTCCTTTAA+TGG | + | chr5.2:15026292-15026311 | MS.gene65363:intron | 25.0% |
| !!! | GTTACAAGTTTGATTTGATA+TGG | + | chr5.2:15028212-15028231 | MS.gene65363:intron | 25.0% |
| !!! | TAACTAGCTTTGAATTTTGT+CGG | - | chr5.2:15028196-15028215 | None:intergenic | 25.0% |
| !!! | TAATAAGTGCTGACAAAATA+TGG | - | chr5.2:15027703-15027722 | None:intergenic | 25.0% |
| !!! | TATAATGGAAATTGAGTTGA+CGG | - | chr5.2:15029154-15029173 | None:intergenic | 25.0% |
| !!! | TGAACCAAGTTATTTCTATT+GGG | + | chr5.2:15027516-15027535 | MS.gene65363:intron | 25.0% |
| !!! | TGTGAAAATGCATTATTTTG+TGG | + | chr5.2:15029643-15029662 | MS.gene65363:intron | 25.0% |
| !!! | TTAAATTTTAGCAGTAGCTA+AGG | + | chr5.2:15028330-15028349 | MS.gene65363:intron | 25.0% |
| !!! | TTGAACCAAGTTATTTCTAT+TGG | + | chr5.2:15027515-15027534 | MS.gene65363:intron | 25.0% |
| AAACCTTCTTGGAATTCTAT+TGG | + | chr5.2:15026519-15026538 | MS.gene65363:CDS | 30.0% | |
| AAAGCGAGTATTTAAGAGTT+TGG | + | chr5.2:15027771-15027790 | MS.gene65363:intron | 30.0% | |
| AAAGCTAGAATAACATGACT+AGG | - | chr5.2:15026431-15026450 | None:intergenic | 30.0% | |
| AAAGCTCAAAAGTCCATTAA+AGG | - | chr5.2:15026308-15026327 | None:intergenic | 30.0% | |
| AACAAAAGCTACATATGAAG+AGG | - | chr5.2:15028918-15028937 | None:intergenic | 30.0% | |
| AACCTTCTTGGAATTCTATT+GGG | + | chr5.2:15026520-15026539 | MS.gene65363:CDS | 30.0% | |
| AACTCTGATTATGTTAGTGT+AGG | + | chr5.2:15027385-15027404 | MS.gene65363:intron | 30.0% | |
| AATCATTCAACATCTGTCAA+AGG | - | chr5.2:15027735-15027754 | None:intergenic | 30.0% | |
| AATCCTTTGCCATAGAATAT+GGG | + | chr5.2:15029911-15029930 | MS.gene65363:intron | 30.0% | |
| AATGAAGGAAAGCTTATATC+TGG | + | chr5.2:15028611-15028630 | MS.gene65363:CDS | 30.0% | |
| AGACACTAATTGTGAAACAT+AGG | + | chr5.2:15027993-15028012 | MS.gene65363:intron | 30.0% | |
| AGGATACAACAATGAGATAA+TGG | - | chr5.2:15029450-15029469 | None:intergenic | 30.0% | |
| AGTATTTAAGAGTTTGGAAG+TGG | + | chr5.2:15027777-15027796 | MS.gene65363:intron | 30.0% | |
| AGTTCAAAGGTTCCAAATAA+TGG | - | chr5.2:15027418-15027437 | None:intergenic | 30.0% | |
| ATAAGCCGAAAACAATTTCT+AGG | - | chr5.2:15030185-15030204 | None:intergenic | 30.0% | |
| ATCAAAACCAGAAGAAAACA+AGG | - | chr5.2:15028874-15028893 | None:intergenic | 30.0% | |
| ATCTAGCAGAATACCATAAA+GGG | + | chr5.2:15027566-15027585 | MS.gene65363:intron | 30.0% | |
| ATGTTGATCTTCATGTTTGA+AGG | + | chr5.2:15028717-15028736 | MS.gene65363:intron | 30.0% | |
| ATTATCTTACCAACGTATGT+AGG | - | chr5.2:15028135-15028154 | None:intergenic | 30.0% | |
| CATTGTGCAAATTTATATCC+GGG | + | chr5.2:15025808-15025827 | MS.gene65363:intron | 30.0% | |
| CCAACTATTATTTATTCACC+AGG | + | chr5.2:15030022-15030041 | MS.gene65363:CDS | 30.0% | |
| CCTGGTGAATAAATAATAGT+TGG | - | chr5.2:15030025-15030044 | None:intergenic | 30.0% | |
| CTGCATTTCTATAACATGTT+GGG | + | chr5.2:15028159-15028178 | MS.gene65363:intron | 30.0% | |
| GAATTTATAGCTAGAAACCA+AGG | + | chr5.2:15029969-15029988 | MS.gene65363:CDS | 30.0% | |
| GAATTTGACAAACAATTCGA+TGG | - | chr5.2:15029822-15029841 | None:intergenic | 30.0% | |
| GACACTAATTGTGAAACATA+GGG | + | chr5.2:15027994-15028013 | MS.gene65363:intron | 30.0% | |
| GATACTACAAAAGAGTTCAA+AGG | - | chr5.2:15027431-15027450 | None:intergenic | 30.0% | |
| GCATTGTGCAAATTTATATC+CGG | + | chr5.2:15025807-15025826 | MS.gene65363:intron | 30.0% | |
| TAATCCTTTGCCATAGAATA+TGG | + | chr5.2:15029910-15029929 | MS.gene65363:intron | 30.0% | |
| TATGGAAATTACCTAAGACA+AGG | - | chr5.2:15025983-15026002 | None:intergenic | 30.0% | |
| TCTGCATTTCTATAACATGT+TGG | + | chr5.2:15028158-15028177 | MS.gene65363:intron | 30.0% | |
| TGAATAAATAATAGTTGGGG+AGG | - | chr5.2:15030020-15030039 | None:intergenic | 30.0% | |
| TGTGCTATAAAAGTCAACAT+TGG | - | chr5.2:15029072-15029091 | None:intergenic | 30.0% | |
| TGTGTGTATTCATCGTTTAT+AGG | + | chr5.2:15026173-15026192 | MS.gene65363:intron | 30.0% | |
| TGTTGATCTTCATGTTTGAA+GGG | + | chr5.2:15028718-15028737 | MS.gene65363:intron | 30.0% | |
| TTATAACAACACATGTCAGT+TGG | + | chr5.2:15027060-15027079 | MS.gene65363:intron | 30.0% | |
| TTCTGTTCAACGATTATTGT+GGG | + | chr5.2:15027118-15027137 | MS.gene65363:intron | 30.0% | |
| TTTCACAATTAGTGTCTTCA+TGG | - | chr5.2:15027990-15028009 | None:intergenic | 30.0% | |
| ! | AAAAGTGGATTCAAATTACC+TGG | - | chr5.2:15030043-15030062 | None:intergenic | 30.0% |
| ! | ACAATCCTAAGTATTGCAAT+TGG | + | chr5.2:15028282-15028301 | MS.gene65363:intron | 30.0% |
| ! | CACTAATAATGATTGCCTTT+TGG | + | chr5.2:15027036-15027055 | MS.gene65363:intron | 30.0% |
| ! | GATAGTTAGCTACATGATTT+TGG | + | chr5.2:15027924-15027943 | MS.gene65363:intron | 30.0% |
| ! | TCATGCCTAGAAATTGTTTT+CGG | + | chr5.2:15030177-15030196 | MS.gene65363:intron | 30.0% |
| ! | TGTTTTGTAGACGAATATCT+AGG | + | chr5.2:15026270-15026289 | MS.gene65363:intron | 30.0% |
| ! | TTGTGCTTAAACTTTTGTAG+TGG | - | chr5.2:15028557-15028576 | None:intergenic | 30.0% |
| !! | CATTATTTTGTGGATAGGAA+GGG | + | chr5.2:15029653-15029672 | MS.gene65363:intron | 30.0% |
| !! | GGATAAAAGCATTGCAATAT+GGG | + | chr5.2:15029026-15029045 | MS.gene65363:CDS | 30.0% |
| !! | TAGCGAGTTATTTTCTGAAT+TGG | + | chr5.2:15027300-15027319 | MS.gene65363:intron | 30.0% |
| !! | TGGATAAAAGCATTGCAATA+TGG | + | chr5.2:15029025-15029044 | MS.gene65363:CDS | 30.0% |
| !!! | GGTATTATTGCATTGACTTT+TGG | + | chr5.2:15029124-15029143 | MS.gene65363:intron | 30.0% |
| AAAGCTACATATGAAGAGGT+TGG | - | chr5.2:15028914-15028933 | None:intergenic | 35.0% | |
| AACAAAGGCAAAATAGTTGG+CGG | - | chr5.2:15029608-15029627 | None:intergenic | 35.0% | |
| AAGTACTTCCATATGCACTA+GGG | + | chr5.2:15029521-15029540 | MS.gene65363:intron | 35.0% | |
| AATATGGTACATATAGCCAG+TGG | - | chr5.2:15027687-15027706 | None:intergenic | 35.0% | |
| ACTATCATTCCAGGAATCTT+TGG | - | chr5.2:15030268-15030287 | None:intergenic | 35.0% | |
| AGAGGGAGGATACTATTAAA+GGG | + | chr5.2:15027603-15027622 | MS.gene65363:intron | 35.0% | |
| AGGTTCCAATTGCAATACTT+AGG | - | chr5.2:15028290-15028309 | None:intergenic | 35.0% | |
| ATACCATAAAGGGTTCACTT+TGG | + | chr5.2:15027576-15027595 | MS.gene65363:intron | 35.0% | |
| ATAGTATCTACTGCATCAGA+TGG | + | chr5.2:15030283-15030302 | MS.gene65363:CDS | 35.0% | |
| ATCCCAATAGAATTCCAAGA+AGG | - | chr5.2:15026525-15026544 | None:intergenic | 35.0% | |
| ATGAAGGTTATGCTATAGAC+TGG | + | chr5.2:15028579-15028598 | MS.gene65363:CDS | 35.0% | |
| ATTAGTACTTCACAGCATGT+AGG | - | chr5.2:15027462-15027481 | None:intergenic | 35.0% | |
| CAAACAAATTCTCCTCTGTA+GGG | - | chr5.2:15028993-15029012 | None:intergenic | 35.0% | |
| CACAATGCCACAAAAATTAG+AGG | - | chr5.2:15025795-15025814 | None:intergenic | 35.0% | |
| CACTAGCATGTCTTTATATC+TGG | + | chr5.2:15028671-15028690 | MS.gene65363:intron | 35.0% | |
| CCAACCCAATAGAAATAACT+TGG | - | chr5.2:15027523-15027542 | None:intergenic | 35.0% | |
| CTATCATTCCAGGAATCTTT+GGG | - | chr5.2:15030267-15030286 | None:intergenic | 35.0% | |
| CTGATGTGAATGTATTGTCA+TGG | + | chr5.2:15029097-15029116 | MS.gene65363:CDS | 35.0% | |
| CTGGTTATCAAAGAGATATG+AGG | + | chr5.2:15028690-15028709 | MS.gene65363:intron | 35.0% | |
| GATCTAGCAGAATACCATAA+AGG | + | chr5.2:15027565-15027584 | MS.gene65363:intron | 35.0% | |
| GTAGGAAATGAGCCATTATT+TGG | + | chr5.2:15027403-15027422 | MS.gene65363:intron | 35.0% | |
| GTTCTGTTCAACGATTATTG+TGG | + | chr5.2:15027117-15027136 | MS.gene65363:intron | 35.0% | |
| GTTGATCTTCATGTTTGAAG+GGG | + | chr5.2:15028719-15028738 | MS.gene65363:intron | 35.0% | |
| TACCATAAAGGGTTCACTTT+GGG | + | chr5.2:15027577-15027596 | MS.gene65363:intron | 35.0% | |
| TAGAGGGAGGATACTATTAA+AGG | + | chr5.2:15027602-15027621 | MS.gene65363:intron | 35.0% | |
| TCTAATGAGTTAAGGTGTGT+TGG | + | chr5.2:15027869-15027888 | MS.gene65363:intron | 35.0% | |
| TGAATGTATTGTCATGGAAC+AGG | + | chr5.2:15029103-15029122 | MS.gene65363:CDS | 35.0% | |
| TGATATGGTAAACATTGTCC+AGG | + | chr5.2:15028227-15028246 | MS.gene65363:intron | 35.0% | |
| TGTACTTCAGTGTACTGAAT+AGG | + | chr5.2:15029190-15029209 | MS.gene65363:intron | 35.0% | |
| TGTCTCATGATTCAACTTAG+AGG | + | chr5.2:15026197-15026216 | MS.gene65363:intron | 35.0% | |
| TTACTGTTGCACCATTTGAT+TGG | - | chr5.2:15026239-15026258 | None:intergenic | 35.0% | |
| TTAGCACTACAACAGTTACA+TGG | + | chr5.2:15028075-15028094 | MS.gene65363:intron | 35.0% | |
| TTAGCAGTAGCTAAGGTTAA+GGG | + | chr5.2:15028337-15028356 | MS.gene65363:intron | 35.0% | |
| TTTAGACGCCAGTAGTTTAT+TGG | + | chr5.2:15029224-15029243 | MS.gene65363:CDS | 35.0% | |
| TTTAGCAGTAGCTAAGGTTA+AGG | + | chr5.2:15028336-15028355 | MS.gene65363:intron | 35.0% | |
| TTTGTTTGCTTCTTGTTCTG+TGG | + | chr5.2:15029005-15029024 | MS.gene65363:CDS | 35.0% | |
| ! | AAAGTACTTCCATATGCACT+AGG | + | chr5.2:15029520-15029539 | MS.gene65363:intron | 35.0% |
| ! | ATGACATAACTAAAGCACCA+TGG | - | chr5.2:15029334-15029353 | None:intergenic | 35.0% |
| ! | GATGATAGTGAAGATGAAGA+AGG | + | chr5.2:15026645-15026664 | MS.gene65363:CDS | 35.0% |
| ! | GGTACAGAAAGAAAAGTACA+AGG | - | chr5.2:15029470-15029489 | None:intergenic | 35.0% |
| ! | GTGAACACCTCTAATTTTTG+TGG | + | chr5.2:15025785-15025804 | MS.gene65363:intron | 35.0% |
| ! | TCTCTTCACGCTTTTCATAT+TGG | + | chr5.2:15025953-15025972 | MS.gene65363:CDS | 35.0% |
| ! | TTCACGCTTTTCATATTGGA+TGG | + | chr5.2:15025957-15025976 | MS.gene65363:CDS | 35.0% |
| ! | TTCTTTTCGAAATATGCCTG+AGG | - | chr5.2:15026100-15026119 | None:intergenic | 35.0% |
| !! | AGTTATTTCTATTGGGTTGG+AGG | + | chr5.2:15027523-15027542 | MS.gene65363:intron | 35.0% |
| !! | CCAAGTTATTTCTATTGGGT+TGG | + | chr5.2:15027520-15027539 | MS.gene65363:intron | 35.0% |
| !! | GCATTATTTTGTGGATAGGA+AGG | + | chr5.2:15029652-15029671 | MS.gene65363:intron | 35.0% |
| !! | GTTATTTCTATTGGGTTGGA+GGG | + | chr5.2:15027524-15027543 | MS.gene65363:intron | 35.0% |
| !!! | AGTAGAACCTTGTTTTCTTC+TGG | + | chr5.2:15028864-15028883 | MS.gene65363:intron | 35.0% |
| AACTCCCTTTACTGGACATA+CGG | + | chr5.2:15028803-15028822 | MS.gene65363:CDS | 40.0% | |
| AATACCCTAAAGAACTGCAC+TGG | + | chr5.2:15030239-15030258 | MS.gene65363:CDS | 40.0% | |
| ACAAAGGCAAAATAGTTGGC+GGG | - | chr5.2:15029607-15029626 | None:intergenic | 40.0% | |
| ACATCGCCAAAAAAAGACCA+AGG | + | chr5.2:15025716-15025735 | MS.gene65363:CDS | 40.0% | |
| ACCAGATGCCAATAAACTAC+TGG | - | chr5.2:15029235-15029254 | None:intergenic | 40.0% | |
| ACTACTGGCGTCTAAACTAT+TGG | - | chr5.2:15029220-15029239 | None:intergenic | 40.0% | |
| AGAACTATCATGGCATGAAC+TGG | + | chr5.2:15029546-15029565 | MS.gene65363:intron | 40.0% | |
| AGGATCACGAATCAGATTGT+GGG | - | chr5.2:15028115-15028134 | None:intergenic | 40.0% | |
| AGTACTTCCATATGCACTAG+GGG | + | chr5.2:15029522-15029541 | MS.gene65363:intron | 40.0% | |
| ATAGGAAGGGAAAGATCATG+TGG | + | chr5.2:15029666-15029685 | MS.gene65363:intron | 40.0% | |
| ATGGGACCTATCTGTAGAAA+GGG | + | chr5.2:15029929-15029948 | MS.gene65363:CDS | 40.0% | |
| ATTCGTGATCCTACATACGT+TGG | + | chr5.2:15028123-15028142 | MS.gene65363:intron | 40.0% | |
| ATTGACCAAACTCCCTTTAC+TGG | + | chr5.2:15028795-15028814 | MS.gene65363:CDS | 40.0% | |
| ATTGACTGGATTCCACTCAA+TGG | - | chr5.2:15029728-15029747 | None:intergenic | 40.0% | |
| CAATATGGGATACTCGTTGT+AGG | + | chr5.2:15029040-15029059 | MS.gene65363:CDS | 40.0% | |
| CAGATAGGTCCCATATTCTA+TGG | - | chr5.2:15029923-15029942 | None:intergenic | 40.0% | |
| CTAGAAACCAAGGACAAGTA+CGG | + | chr5.2:15029979-15029998 | MS.gene65363:CDS | 40.0% | |
| CTCATGAAGGTTGTATCAAC+CGG | + | chr5.2:15026807-15026826 | MS.gene65363:CDS | 40.0% | |
| GATATTGTTCAAGACACCTC+AGG | + | chr5.2:15026081-15026100 | MS.gene65363:CDS | 40.0% | |
| GCAAACAAATTCTCCTCTGT+AGG | - | chr5.2:15028994-15029013 | None:intergenic | 40.0% | |
| GCAGTAGATACTATCATTCC+AGG | - | chr5.2:15030277-15030296 | None:intergenic | 40.0% | |
| TAGAAACCAAGGACAAGTAC+GGG | + | chr5.2:15029980-15029999 | MS.gene65363:CDS | 40.0% | |
| TAGGATCACGAATCAGATTG+TGG | - | chr5.2:15028116-15028135 | None:intergenic | 40.0% | |
| TATGGGACCTATCTGTAGAA+AGG | + | chr5.2:15029928-15029947 | MS.gene65363:CDS | 40.0% | |
| TATGTCCAGTAAAGGGAGTT+TGG | - | chr5.2:15028803-15028822 | None:intergenic | 40.0% | |
| TCACCAGTTTCATGGTTGTT+AGG | - | chr5.2:15026591-15026610 | None:intergenic | 40.0% | |
| TCATGATCTCAGATCGCTTA+AGG | + | chr5.2:15029278-15029297 | MS.gene65363:CDS | 40.0% | |
| TCCCCATGATGCACATATAT+GGG | - | chr5.2:15026855-15026874 | None:intergenic | 40.0% | |
| TGAAGAGAGTTGTAAGCAGA+AGG | - | chr5.2:15025941-15025960 | None:intergenic | 40.0% | |
| TGTAGTGCTAAACATGCTGT+GGG | - | chr5.2:15028066-15028085 | None:intergenic | 40.0% | |
| TTACGTGAGCTGATTATCAG+AGG | - | chr5.2:15029773-15029792 | None:intergenic | 40.0% | |
| TTCAACGATTATTGTGGGAC+AGG | + | chr5.2:15027123-15027142 | MS.gene65363:intron | 40.0% | |
| TTCCACTCAATGGATGTGAT+CGG | - | chr5.2:15029718-15029737 | None:intergenic | 40.0% | |
| TTCCCAAAGTGAACCCTTTA+TGG | - | chr5.2:15027582-15027601 | None:intergenic | 40.0% | |
| TTGTAGTGCTAAACATGCTG+TGG | - | chr5.2:15028067-15028086 | None:intergenic | 40.0% | |
| ! | CTCTTTTCAGCAAACTGTAC+TGG | + | chr5.2:15027632-15027651 | MS.gene65363:intron | 40.0% |
| ! | GAATGTTGTGATTTTGCCAC+TGG | + | chr5.2:15027668-15027687 | MS.gene65363:intron | 40.0% |
| ! | TAACTAAAGCACCATGGACA+TGG | - | chr5.2:15029328-15029347 | None:intergenic | 40.0% |
| ! | TTTCAGCAAACTGTACTGGT+TGG | + | chr5.2:15027636-15027655 | MS.gene65363:intron | 40.0% |
| !! | AAGATGAAGAAGGTGTTGTC+GGG | + | chr5.2:15026655-15026674 | MS.gene65363:CDS | 40.0% |
| !! | ATATTGGATGGCCTTGTCTT+AGG | + | chr5.2:15025969-15025988 | MS.gene65363:CDS | 40.0% |
| !! | GAAGATGAAGAAGGTGTTGT+CGG | + | chr5.2:15026654-15026673 | MS.gene65363:CDS | 40.0% |
| !! | GGCTCGTTTGGGATTTATTT+TGG | + | chr5.2:15027807-15027826 | MS.gene65363:intron | 40.0% |
| AATAGTTGGCGGGAAGAACT+CGG | - | chr5.2:15029597-15029616 | None:intergenic | 45.0% | |
| ACACAGTGTACTTCATGGCA+GGG | + | chr5.2:15026127-15026146 | MS.gene65363:CDS | 45.0% | |
| ACTACCCGTATGTCCAGTAA+AGG | - | chr5.2:15028811-15028830 | None:intergenic | 45.0% | |
| ACTCCCTTTACTGGACATAC+GGG | + | chr5.2:15028804-15028823 | MS.gene65363:CDS | 45.0% | |
| AGAGTTTGGAAGTGGAACTG+AGG | + | chr5.2:15027785-15027804 | MS.gene65363:intron | 45.0% | |
| AGCCCCATATATGTGCATCA+TGG | + | chr5.2:15026849-15026868 | MS.gene65363:CDS | 45.0% | |
| AGTTCTTCCCCTAGTGCATA+TGG | - | chr5.2:15029532-15029551 | None:intergenic | 45.0% | |
| ATAGTACCAATGCTGCACAC+AGG | - | chr5.2:15027228-15027247 | None:intergenic | 45.0% | |
| ATCCGATCACATCCATTGAG+TGG | + | chr5.2:15029713-15029732 | MS.gene65363:CDS | 45.0% | |
| CACGAATCAGATTGTGGGAT+CGG | - | chr5.2:15028110-15028129 | None:intergenic | 45.0% | |
| CACTAGGGGAAGAACTATCA+TGG | + | chr5.2:15029536-15029555 | MS.gene65363:intron | 45.0% | |
| CCCCATATATGTGCATCATG+GGG | + | chr5.2:15026851-15026870 | MS.gene65363:CDS | 45.0% | |
| CCCCATGATGCACATATATG+GGG | - | chr5.2:15026854-15026873 | None:intergenic | 45.0% | |
| CCTGAACTACATCAACTCCT+TGG | - | chr5.2:15028532-15028551 | None:intergenic | 45.0% | |
| CTACCCGTATGTCCAGTAAA+GGG | - | chr5.2:15028810-15028829 | None:intergenic | 45.0% | |
| CTAGCAGAGACAGAAATGCA+AGG | + | chr5.2:15028503-15028522 | MS.gene65363:CDS | 45.0% | |
| CTCCCCATGATGCACATATA+TGG | - | chr5.2:15026856-15026875 | None:intergenic | 45.0% | |
| GAGTTTGGAAGTGGAACTGA+GGG | + | chr5.2:15027786-15027805 | MS.gene65363:intron | 45.0% | |
| GCCAGTAGTTTATTGGCATC+TGG | + | chr5.2:15029231-15029250 | MS.gene65363:CDS | 45.0% | |
| GCCCCATATATGTGCATCAT+GGG | + | chr5.2:15026850-15026869 | MS.gene65363:CDS | 45.0% | |
| GGTCCCATATTCTATGGCAA+AGG | - | chr5.2:15029917-15029936 | None:intergenic | 45.0% | |
| GTGCCTAACAACCATGAAAC+TGG | + | chr5.2:15026585-15026604 | MS.gene65363:CDS | 45.0% | |
| GTTTCATGGTTGTTAGGCAC+CGG | - | chr5.2:15026585-15026604 | None:intergenic | 45.0% | |
| TATGGGATACTCGTTGTAGG+AGG | + | chr5.2:15029043-15029062 | MS.gene65363:CDS | 45.0% | |
| TCCACACACAGTGTACTTCA+TGG | + | chr5.2:15026122-15026141 | MS.gene65363:CDS | 45.0% | |
| TGAAACTGGTGACTCTGCAA+TGG | + | chr5.2:15026599-15026618 | MS.gene65363:CDS | 45.0% | |
| TGACTCTGCAATGGATAGTG+AGG | + | chr5.2:15026608-15026627 | MS.gene65363:CDS | 45.0% | |
| TGGATGTGATCGGATGCTTA+TGG | - | chr5.2:15029708-15029727 | None:intergenic | 45.0% | |
| TTCCATGTTGCAGCAGATGT+AGG | - | chr5.2:15028774-15028793 | None:intergenic | 45.0% | |
| TTGCAGAGTCACCAGTTTCA+TGG | - | chr5.2:15026599-15026618 | None:intergenic | 45.0% | |
| ! | ACAGAAATGCAAGGTGTCCA+AGG | + | chr5.2:15028512-15028531 | MS.gene65363:CDS | 45.0% |
| ! | AGGGTTCACTTTGGGAATAG+AGG | + | chr5.2:15027585-15027604 | MS.gene65363:intron | 45.0% |
| ! | GCACATATATGGGGCTTTTG+TGG | - | chr5.2:15026845-15026864 | None:intergenic | 45.0% |
| ! | GGGTTCACTTTGGGAATAGA+GGG | + | chr5.2:15027586-15027605 | MS.gene65363:intron | 45.0% |
| ! | TATATGGGGCTTTTGTGGCA+TGG | - | chr5.2:15026840-15026859 | None:intergenic | 45.0% |
| ! | TGGCATCTGGTAGTGATGAT+GGG | + | chr5.2:15029244-15029263 | MS.gene65363:CDS | 45.0% |
| ! | TTCACTTTGGGAATAGAGGG+AGG | + | chr5.2:15027589-15027608 | MS.gene65363:intron | 45.0% |
| ! | TTGGCATCTGGTAGTGATGA+TGG | + | chr5.2:15029243-15029262 | MS.gene65363:CDS | 45.0% |
| !! | AGATGAAGAAGGTGTTGTCG+GGG | + | chr5.2:15026656-15026675 | MS.gene65363:CDS | 45.0% |
| !! | CCAAGGAGTTGATGTAGTTC+AGG | + | chr5.2:15028529-15028548 | MS.gene65363:CDS | 45.0% |
| !! | GCGAAAGAAGAAGCATTGAC+TGG | - | chr5.2:15029742-15029761 | None:intergenic | 45.0% |
| AAGAAGGTTTCTCAGCCTGG+GGG | - | chr5.2:15026509-15026528 | None:intergenic | 50.0% | |
| AGCCTACATCTGCTGCAACA+TGG | + | chr5.2:15028769-15028788 | MS.gene65363:CDS | 50.0% | |
| CAAGAAGGTTTCTCAGCCTG+GGG | - | chr5.2:15026510-15026529 | None:intergenic | 50.0% | |
| CACACAGTGTACTTCATGGC+AGG | + | chr5.2:15026126-15026145 | MS.gene65363:CDS | 50.0% | |
| CACACTTTAACCGGAAGCTG+TGG | - | chr5.2:15025869-15025888 | None:intergenic | 50.0% | |
| CACAGCTTCCGGTTAAAGTG+TGG | + | chr5.2:15025867-15025886 | MS.gene65363:CDS | 50.0% | |
| CCAAGAAGGTTTCTCAGCCT+GGG | - | chr5.2:15026511-15026530 | None:intergenic | 50.0% | |
| CCAGGTTGCCACACTTTAAC+CGG | - | chr5.2:15025878-15025897 | None:intergenic | 50.0% | |
| CCTATCTGTAGAAAGGGACG+AGG | + | chr5.2:15029935-15029954 | MS.gene65363:CDS | 50.0% | |
| CCTCGTCCCTTTCTACAGAT+AGG | - | chr5.2:15029938-15029957 | None:intergenic | 50.0% | |
| CGTTCAATGAATCCCTGCAG+TGG | + | chr5.2:15028965-15028984 | MS.gene65363:intron | 50.0% | |
| GACTGGAGTCGTCAGAATGA+AGG | + | chr5.2:15028596-15028615 | MS.gene65363:CDS | 50.0% | |
| GAGGAAGTTGCCTGCAAAGT+AGG | - | chr5.2:15026684-15026703 | None:intergenic | 50.0% | |
| GCCATGAAGTACACTGTGTG+TGG | - | chr5.2:15026126-15026145 | None:intergenic | 50.0% | |
| GGTGCCAGTGCAGTTCTTTA+GGG | - | chr5.2:15030246-15030265 | None:intergenic | 50.0% | |
| TAAAGTGTGGCAACCTGGTG+TGG | + | chr5.2:15025880-15025899 | MS.gene65363:CDS | 50.0% | |
| TAGTGAGGACAGTGACAGTG+AGG | + | chr5.2:15026623-15026642 | MS.gene65363:CDS | 50.0% | |
| TCCAAGAAGGTTTCTCAGCC+TGG | - | chr5.2:15026512-15026531 | None:intergenic | 50.0% | |
| TCTGTTCGCACCTACAGTTG+CGG | + | chr5.2:15026777-15026796 | MS.gene65363:intron | 50.0% | |
| TCTTCCAACTTGTCCACACC+AGG | - | chr5.2:15025896-15025915 | None:intergenic | 50.0% | |
| TGTAGAAAGGGACGAGGAAG+AGG | + | chr5.2:15029941-15029960 | MS.gene65363:CDS | 50.0% | |
| TTCTTCAGTGCCACAGCTTC+CGG | + | chr5.2:15025856-15025875 | MS.gene65363:CDS | 50.0% | |
| TTGCGGAGGGTAACTCATGA+AGG | + | chr5.2:15026794-15026813 | MS.gene65363:CDS | 50.0% | |
| TTTGTGGCATGGAGCGTATC+CGG | - | chr5.2:15026829-15026848 | None:intergenic | 50.0% | |
| ! | CTAAAGCACCATGGACATGG+CGG | - | chr5.2:15029325-15029344 | None:intergenic | 50.0% |
| !! | GATGAAGAAGGTGTTGTCGG+GGG | + | chr5.2:15026657-15026676 | MS.gene65363:CDS | 50.0% |
| AGAAAGGGACGAGGAAGAGG+AGG | + | chr5.2:15029944-15029963 | MS.gene65363:CDS | 55.0% | |
| AGAAGGTTTCTCAGCCTGGG+GGG | - | chr5.2:15026508-15026527 | None:intergenic | 55.0% | |
| AGTGGAACTGAGGGCTCGTT+TGG | + | chr5.2:15027795-15027814 | MS.gene65363:intron | 55.0% | |
| AGTTGGGGAGGCAGATCTTC+AGG | - | chr5.2:15030008-15030027 | None:intergenic | 55.0% | |
| CACTGGCACCCAAAGATTCC+TGG | + | chr5.2:15030256-15030275 | MS.gene65363:CDS | 55.0% | |
| CCCAGGCTGAGAAACCTTCT+TGG | + | chr5.2:15026508-15026527 | MS.gene65363:intron | 55.0% | |
| CCGGTTAAAGTGTGGCAACC+TGG | + | chr5.2:15025875-15025894 | MS.gene65363:CDS | 55.0% | |
| CGCTTCGTTTCTTCGAGTCC+CGG | - | chr5.2:15025829-15025848 | None:intergenic | 55.0% | |
| GAGTTACCCTCCGCAACTGT+AGG | - | chr5.2:15026790-15026809 | None:intergenic | 55.0% | |
| GCAACCTGGTGTGGACAAGT+TGG | + | chr5.2:15025889-15025908 | MS.gene65363:CDS | 55.0% | |
| GGGTGCCAGTGCAGTTCTTT+AGG | - | chr5.2:15030247-15030266 | None:intergenic | 55.0% | |
| GTACTTCATGGCAGGGACAC+AGG | + | chr5.2:15026134-15026153 | MS.gene65363:CDS | 55.0% | |
| GTGGAACTGAGGGCTCGTTT+GGG | + | chr5.2:15027796-15027815 | MS.gene65363:intron | 55.0% | |
| GTGTGACCTGTGTGCAGCAT+TGG | + | chr5.2:15027219-15027238 | MS.gene65363:intron | 55.0% | |
| TGTGCATCATGGGGAGACTC+TGG | + | chr5.2:15026860-15026879 | MS.gene65363:CDS | 55.0% | |
| TTCGCACCTACAGTTGCGGA+GGG | + | chr5.2:15026781-15026800 | MS.gene65363:intron | 55.0% | |
| TTTCCCTTCCGCCATGTCCA+TGG | + | chr5.2:15029314-15029333 | MS.gene65363:intron | 55.0% | |
| ! | TTCTGGGAAGACACGTGAGC+CGG | + | chr5.2:15026563-15026582 | MS.gene65363:CDS | 55.0% |
| CAGGAGCCCGTACTTGTCCT+TGG | - | chr5.2:15029989-15030008 | None:intergenic | 60.0% | |
| CTCTGTAGGGCTCCACTGCA+GGG | - | chr5.2:15028980-15028999 | None:intergenic | 60.0% | |
| GGGAGACTCTGGTCATGTGC+AGG | + | chr5.2:15026871-15026890 | MS.gene65363:CDS | 60.0% | |
| GTTCGCACCTACAGTTGCGG+AGG | + | chr5.2:15026780-15026799 | MS.gene65363:intron | 60.0% | |
| TGATGTTGCATGTGCCCCCC+AGG | + | chr5.2:15026491-15026510 | MS.gene65363:intron | 60.0% | |
| TGTCGGGGGTCCTACTTTGC+AGG | + | chr5.2:15026671-15026690 | MS.gene65363:CDS | 60.0% | |
| ! | AGCACCATGGACATGGCGGA+AGG | - | chr5.2:15029321-15029340 | None:intergenic | 60.0% |
| ! | GCACCATGGACATGGCGGAA+GGG | - | chr5.2:15029320-15029339 | None:intergenic | 60.0% |
| CCTCTGTAGGGCTCCACTGC+AGG | - | chr5.2:15028981-15029000 | None:intergenic | 65.0% | |
| CCTGCAGTGGAGCCCTACAG+AGG | + | chr5.2:15028978-15028997 | MS.gene65363:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 15025699 | 15030336 | 15025699 | ID=MS.gene65363 |
| chr5.2 | mRNA | 15025699 | 15030336 | 15025699 | ID=MS.gene65363.t1;Parent=MS.gene65363 |
| chr5.2 | exon | 15025699 | 15025737 | 15025699 | ID=MS.gene65363.t1.exon1;Parent=MS.gene65363.t1 |
| chr5.2 | CDS | 15025699 | 15025737 | 15025699 | ID=cds.MS.gene65363.t1;Parent=MS.gene65363.t1 |
| chr5.2 | exon | 15025839 | 15025990 | 15025839 | ID=MS.gene65363.t1.exon2;Parent=MS.gene65363.t1 |
| chr5.2 | CDS | 15025839 | 15025990 | 15025839 | ID=cds.MS.gene65363.t1;Parent=MS.gene65363.t1 |
| chr5.2 | exon | 15026077 | 15026155 | 15026077 | ID=MS.gene65363.t1.exon3;Parent=MS.gene65363.t1 |
| chr5.2 | CDS | 15026077 | 15026155 | 15026077 | ID=cds.MS.gene65363.t1;Parent=MS.gene65363.t1 |
| chr5.2 | exon | 15026513 | 15026692 | 15026513 | ID=MS.gene65363.t1.exon4;Parent=MS.gene65363.t1 |
| chr5.2 | CDS | 15026513 | 15026692 | 15026513 | ID=cds.MS.gene65363.t1;Parent=MS.gene65363.t1 |
| chr5.2 | exon | 15026794 | 15026892 | 15026794 | ID=MS.gene65363.t1.exon5;Parent=MS.gene65363.t1 |
| chr5.2 | CDS | 15026794 | 15026892 | 15026794 | ID=cds.MS.gene65363.t1;Parent=MS.gene65363.t1 |
| chr5.2 | exon | 15028473 | 15028632 | 15028473 | ID=MS.gene65363.t1.exon6;Parent=MS.gene65363.t1 |
| chr5.2 | CDS | 15028473 | 15028632 | 15028473 | ID=cds.MS.gene65363.t1;Parent=MS.gene65363.t1 |
| chr5.2 | exon | 15028739 | 15028845 | 15028739 | ID=MS.gene65363.t1.exon7;Parent=MS.gene65363.t1 |
| chr5.2 | CDS | 15028739 | 15028845 | 15028739 | ID=cds.MS.gene65363.t1;Parent=MS.gene65363.t1 |
| chr5.2 | exon | 15028985 | 15029124 | 15028985 | ID=MS.gene65363.t1.exon8;Parent=MS.gene65363.t1 |
| chr5.2 | CDS | 15028985 | 15029124 | 15028985 | ID=cds.MS.gene65363.t1;Parent=MS.gene65363.t1 |
| chr5.2 | exon | 15029212 | 15029299 | 15029212 | ID=MS.gene65363.t1.exon9;Parent=MS.gene65363.t1 |
| chr5.2 | CDS | 15029212 | 15029299 | 15029212 | ID=cds.MS.gene65363.t1;Parent=MS.gene65363.t1 |
| chr5.2 | exon | 15029670 | 15029788 | 15029670 | ID=MS.gene65363.t1.exon10;Parent=MS.gene65363.t1 |
| chr5.2 | CDS | 15029670 | 15029788 | 15029670 | ID=cds.MS.gene65363.t1;Parent=MS.gene65363.t1 |
| chr5.2 | exon | 15029926 | 15030043 | 15029926 | ID=MS.gene65363.t1.exon11;Parent=MS.gene65363.t1 |
| chr5.2 | CDS | 15029926 | 15030043 | 15029926 | ID=cds.MS.gene65363.t1;Parent=MS.gene65363.t1 |
| chr5.2 | exon | 15030232 | 15030336 | 15030232 | ID=MS.gene65363.t1.exon12;Parent=MS.gene65363.t1 |
| chr5.2 | CDS | 15030232 | 15030336 | 15030232 | ID=cds.MS.gene65363.t1;Parent=MS.gene65363.t1 |
| Gene Sequence |
| Protein sequence |
