AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene65386

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene65386.t1 MTR_6g051425 36.296 270 166 5 4 271 24 289 2.93e-49 176
MS.gene65386.t1 MTR_0402s0040 38.372 172 102 2 1 172 30 197 4.22e-30 125
MS.gene65386.t1 MTR_1g070355 31.224 237 157 5 2 238 79 309 6.98e-30 125
MS.gene65386.t1 MTR_4g035820 28.933 356 216 14 3 331 81 426 2.70e-27 118
MS.gene65386.t1 MTR_7g446520 32.567 261 148 7 1 260 92 325 5.35e-27 113
MS.gene65386.t1 MTR_0558s0020 26.744 258 170 5 3 244 42 296 3.03e-26 110
MS.gene65386.t1 MTR_3g006370 51.456 103 47 2 1 103 54 153 1.39e-24 103
MS.gene65386.t1 MTR_7g446480 34.270 178 113 2 76 252 140 314 7.93e-24 103
MS.gene65386.t1 MTR_2g098920 54.369 103 42 3 2 104 85 182 9.55e-24 101
MS.gene65386.t1 MTR_7g446510 32.701 211 126 4 46 252 131 329 9.76e-24 103
MS.gene65386.t1 MTR_4g067290 52.427 103 44 3 2 104 61 158 1.40e-23 100
MS.gene65386.t1 MTR_4g067290 52.427 103 44 3 2 104 61 158 1.45e-23 100
MS.gene65386.t1 MTR_4g067290 52.427 103 44 3 2 104 79 176 1.92e-23 100
MS.gene65386.t1 MTR_4g067290 52.427 103 44 3 2 104 81 178 1.95e-23 100
MS.gene65386.t1 MTR_4g067290 52.427 103 44 3 2 104 81 178 2.00e-23 100
MS.gene65386.t1 MTR_4g067290 52.427 103 44 3 2 104 121 218 3.93e-23 100
MS.gene65386.t1 MTR_2g098880 43.519 108 59 2 1 108 65 170 7.21e-23 99.0
MS.gene65386.t1 MTR_5g076070 27.273 231 160 5 3 232 59 282 9.04e-23 99.4
MS.gene65386.t1 MTR_2g098880 43.519 108 59 2 1 108 77 182 9.79e-23 99.0
MS.gene65386.t1 MTR_1g008290 34.459 148 89 4 51 197 4 144 6.86e-22 92.8
MS.gene65386.t1 MTR_8g446020 30.286 175 118 2 71 244 85 256 2.71e-21 94.4
MS.gene65386.t1 MTR_5g015480 41.667 120 67 2 1 120 60 176 2.45e-19 89.0
MS.gene65386.t1 MTR_6g090505 25.108 231 158 4 42 260 20 247 7.72e-19 89.4
MS.gene65386.t1 MTR_1g083640 25.877 228 150 5 3 214 57 281 1.29e-17 84.3
MS.gene65386.t1 MTR_6g022070 25.000 208 142 3 298 496 1 203 1.02e-16 82.4
MS.gene65386.t1 MTR_1g019850 33.083 133 79 2 1 133 74 196 1.02e-16 80.5
MS.gene65386.t1 MTR_2g070590 37.255 102 61 1 1 102 21 119 1.11e-16 77.0
MS.gene65386.t1 MTR_7g074790 31.176 170 94 2 1 170 14 160 2.09e-16 79.7
MS.gene65386.t1 MTR_6g017200 36.842 95 57 1 1 95 62 153 1.24e-14 72.4
MS.gene65386.t1 MTR_0853s0010 30.657 137 84 3 1 133 29 158 2.70e-14 71.6
MS.gene65386.t1 MTR_5g039760 27.835 194 111 5 1 193 14 179 3.71e-14 72.0
MS.gene65386.t1 MTR_3g450850 25.105 239 165 5 3 232 53 286 4.37e-14 74.7
MS.gene65386.t1 MTR_1g013060 25.616 203 146 3 3 202 30 230 1.19e-13 71.6
MS.gene65386.t1 MTR_7g113010 37.607 117 56 3 1 117 461 560 1.76e-13 74.3
MS.gene65386.t1 MTR_6g022080 27.273 154 108 3 3 155 91 241 2.00e-13 71.2
MS.gene65386.t1 MTR_7g028855 36.154 130 81 2 1 130 124 251 4.48e-13 72.4
MS.gene65386.t1 MTR_1g057920 38.202 89 52 1 1 89 38 123 9.18e-13 65.9
MS.gene65386.t1 MTR_2g101460 40.517 116 63 3 3 116 51 162 1.71e-12 67.4
MS.gene65386.t1 MTR_2g101460 41.071 112 60 3 3 112 61 168 2.30e-12 67.4
MS.gene65386.t1 MTR_8g465780 33.333 96 63 1 382 476 8 103 2.38e-11 63.5
MS.gene65386.t1 MTR_2g014100 25.000 196 131 4 3 182 50 245 5.97e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene65386.t1 AT4G38180 75.242 723 168 3 1 723 77 788 0.0 1132
MS.gene65386.t1 AT2G27110 46.117 631 300 9 1 630 53 644 0.0 579
MS.gene65386.t1 AT2G27110 46.117 631 300 9 1 630 53 644 0.0 579
MS.gene65386.t1 AT4G38170 48.540 548 261 5 175 721 18 545 0.0 548
MS.gene65386.t1 AT2G27110 52.778 468 213 3 163 630 40 499 2.03e-178 526
MS.gene65386.t1 AT4G15090 35.791 651 402 9 1 649 55 691 1.46e-145 446
MS.gene65386.t1 AT4G15090 35.791 651 402 9 1 649 55 691 1.46e-145 446
MS.gene65386.t1 AT4G15090 35.791 651 402 9 1 649 55 691 1.46e-145 446
MS.gene65386.t1 AT4G15090 35.791 651 402 9 1 649 55 691 1.46e-145 446
MS.gene65386.t1 AT4G15090 35.791 651 402 9 1 649 55 691 1.46e-145 446
MS.gene65386.t1 AT3G22170 35.000 640 361 9 1 624 74 674 4.98e-138 427
MS.gene65386.t1 AT3G22170 35.000 640 361 9 1 624 74 674 4.98e-138 427
MS.gene65386.t1 AT1G76320 36.943 628 361 12 1 622 1 599 1.32e-134 412
MS.gene65386.t1 AT1G76320 36.943 628 361 12 1 622 1 599 7.36e-134 412
MS.gene65386.t1 AT1G76320 36.943 628 361 12 1 622 1 599 7.36e-134 412
MS.gene65386.t1 AT1G76320 36.943 628 361 12 1 622 1 599 9.19e-134 412
MS.gene65386.t1 AT5G18960 36.960 625 335 12 1 621 215 784 1.02e-131 409
MS.gene65386.t1 AT5G18960 41.176 102 43 3 1 102 47 131 5.44e-15 79.3
MS.gene65386.t1 AT5G18960 36.960 625 335 12 1 621 215 784 1.02e-131 409
MS.gene65386.t1 AT5G18960 41.176 102 43 3 1 102 47 131 5.44e-15 79.3
MS.gene65386.t1 AT3G06250 36.699 624 335 13 1 621 194 760 1.54e-130 405
MS.gene65386.t1 AT3G06250 40.196 102 44 3 1 102 32 116 1.86e-14 77.8
MS.gene65386.t1 AT3G06250 36.699 624 335 13 1 621 194 760 1.54e-130 405
MS.gene65386.t1 AT3G06250 40.196 102 44 3 1 102 32 116 1.86e-14 77.8
MS.gene65386.t1 AT3G06250 36.699 624 335 13 1 621 194 760 1.54e-130 405
MS.gene65386.t1 AT3G06250 40.196 102 44 3 1 102 32 116 1.86e-14 77.8
MS.gene65386.t1 AT4G19990 34.961 635 350 15 2 620 26 613 1.35e-116 368
MS.gene65386.t1 AT4G19990 34.961 635 350 15 2 620 26 613 1.46e-116 368
MS.gene65386.t1 AT4G19990 34.961 635 350 15 2 620 26 613 1.46e-116 368
MS.gene65386.t1 AT4G19990 34.961 635 350 15 2 620 40 627 1.99e-116 368
MS.gene65386.t1 AT4G19990 34.961 635 350 15 2 620 26 613 4.04e-116 367
MS.gene65386.t1 AT4G19990 34.961 635 350 15 2 620 26 613 4.04e-116 367
MS.gene65386.t1 AT2G32250 33.118 619 359 8 1 619 42 605 2.79e-114 362
MS.gene65386.t1 AT2G32250 33.603 619 356 8 1 619 1 564 7.32e-114 361
MS.gene65386.t1 AT2G32250 33.603 619 356 8 1 619 1 564 7.42e-114 361
MS.gene65386.t1 AT2G32250 33.118 619 359 8 1 619 42 605 1.14e-113 362
MS.gene65386.t1 AT2G32250 33.118 619 359 8 1 619 42 605 1.14e-113 362
MS.gene65386.t1 AT2G32250 33.118 619 359 8 1 619 42 605 1.64e-113 362
MS.gene65386.t1 AT2G32250 33.118 619 359 8 1 619 42 605 1.64e-113 362
MS.gene65386.t1 AT2G32250 33.118 619 359 8 1 619 42 605 1.64e-113 362
MS.gene65386.t1 AT4G19990 33.777 601 335 15 36 620 3 556 6.03e-104 333
MS.gene65386.t1 AT1G52520 31.522 644 395 18 1 628 89 702 2.88e-94 308
MS.gene65386.t1 AT1G80010 30.368 652 402 17 1 627 99 723 1.28e-89 296
MS.gene65386.t1 AT1G10240 29.366 647 417 17 3 639 54 670 1.16e-83 279
MS.gene65386.t1 AT1G10240 29.366 647 417 17 3 639 54 670 1.16e-83 279
MS.gene65386.t1 AT5G28530 31.379 580 357 15 3 561 61 620 6.18e-75 256
MS.gene65386.t1 AT5G28530 31.379 580 353 16 3 561 61 616 1.27e-74 255
MS.gene65386.t1 AT5G28530 31.379 580 353 16 3 561 61 616 1.27e-74 255
MS.gene65386.t1 AT5G28530 28.471 569 325 16 3 561 61 557 1.41e-52 192
MS.gene65386.t1 AT5G28530 28.471 569 321 17 3 561 61 553 1.94e-52 192
MS.gene65386.t1 AT3G59470 54.369 103 42 3 2 104 75 172 1.43e-26 109
MS.gene65386.t1 AT3G59470 54.369 103 42 3 2 104 75 172 1.43e-26 109
MS.gene65386.t1 AT3G59470 54.369 103 42 3 2 104 87 184 2.02e-26 109
MS.gene65386.t1 AT2G43280 50.450 111 50 3 3 111 28 135 3.00e-25 104
MS.gene65386.t1 AT3G07500 50.962 104 47 2 1 104 37 136 1.86e-24 102
MS.gene65386.t1 AT2G43280 48.039 102 48 3 12 111 2 100 4.50e-21 91.3
MS.gene65386.t1 AT4G12850 42.157 102 52 2 1 102 15 109 2.59e-18 82.4
MS.gene65386.t1 AT4G12850 42.157 102 52 2 1 102 15 109 4.59e-18 82.0
MS.gene65386.t1 AT4G12850 42.157 102 52 2 1 102 15 109 6.99e-18 82.8

Find 160 sgRNAs with CRISPR-Local

Find 422 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGTTCCCACCGGCAAATTTC+TGG 0.095237 5.2:-83992554 MS.gene65386:CDS
CAAAGAAGAAATTAGGATTT+TGG 0.123283 5.2:+83992327 None:intergenic
ACCTTTATCAACAAATTTAA+AGG 0.150987 5.2:+83991110 None:intergenic
TCATGTATATACTTACTATT+TGG 0.183092 5.2:-83991172 MS.gene65386:CDS
TTACCCTTTGCTCCCTTTAC+TGG 0.199899 5.2:-83992167 MS.gene65386:CDS
ACATATCATGTAGCTAAATT+TGG 0.219908 5.2:-83991405 MS.gene65386:CDS
CATGGTCAACCTGTTCTCTT+TGG 0.223496 5.2:-83992134 MS.gene65386:CDS
TGAACAGCAAAGAAGAAATT+AGG 0.236435 5.2:+83992320 None:intergenic
CCTTCTTTGCAGACATATTC+TGG 0.237940 5.2:-83991298 MS.gene65386:CDS
TTTGCAACATCATAAGTTTC+AGG 0.247657 5.2:+83991078 None:intergenic
GCCTTTAAATTTGTTGATAA+AGG 0.252707 5.2:-83991111 MS.gene65386:CDS
AACCCTAATTGACACTTTAC+AGG 0.254986 5.2:-83992522 MS.gene65386:CDS
TGAAACTCGGCTTCAAAGTT+TGG 0.256048 5.2:+83991888 None:intergenic
CAGCCTGTAAAGTGTCAATT+AGG 0.264947 5.2:+83992519 None:intergenic
TTGCAAACTGACGTTGCTTT+TGG 0.278488 5.2:+83991206 None:intergenic
TAATATCTTGCAGGATGATA+TGG 0.290977 5.2:-83986991 MS.gene65386:intron
AATTTCTTCTTTGCTGTTCA+AGG 0.292471 5.2:-83992317 MS.gene65386:CDS
CACTTTACAGGCTGCTGGTA+TGG 0.294110 5.2:-83992510 MS.gene65386:CDS
TCTGCCAAGTGGATCGTATC+TGG 0.294800 5.2:-83992632 MS.gene65386:CDS
CTTAAAGAACTGATTTAAAC+TGG 0.329541 5.2:+83991641 None:intergenic
GCGTTTGATCTCTCTGTCTT+TGG 0.332960 5.2:+83992715 None:intergenic
AAGCAATACATTCCGCTTGC+AGG 0.336808 5.2:-83991770 MS.gene65386:CDS
TTGACGAATTTGAGTCTTGC+TGG 0.341126 5.2:-83991839 MS.gene65386:CDS
GTGTAATTCAACCTTGCCTT+GGG 0.343488 5.2:+83992245 None:intergenic
CAGAAACGGTGACGAGTGTC+TGG 0.344341 5.2:+83991969 None:intergenic
CTCCCCATCATCCTCAGCTT+TGG 0.350878 5.2:+83991434 None:intergenic
TACATTCCGCTTGCAGGCAC+TGG 0.358152 5.2:-83991764 MS.gene65386:CDS
AGCATGAACTCTTACTTTGA+TGG 0.369267 5.2:-83991681 MS.gene65386:CDS
TTGCAGATCCAGAAATTTGC+CGG 0.376547 5.2:+83992546 None:intergenic
GGAGATGGGGTCCTCAATAC+TGG 0.377437 5.2:+83991546 None:intergenic
AAACTGAAGCTTCCTTTGTC+TGG 0.378773 5.2:-83992091 MS.gene65386:CDS
GCTTTACTGAGGTTGATTGT+AGG 0.379314 5.2:-83992430 MS.gene65386:CDS
ACATGGCTTACCGCCATGTC+TGG 0.388564 5.2:-83992059 MS.gene65386:CDS
ACACTACTTACCGCTCTAAC+AGG 0.393642 5.2:-83992196 MS.gene65386:CDS
GAAACTCGGCTTCAAAGTTT+GGG 0.402169 5.2:+83991889 None:intergenic
CGGCTTCAAAGTTTGGGAAC+TGG 0.404355 5.2:+83991895 None:intergenic
TCTGCACTCATCAAAGAGTA+TGG 0.412149 5.2:-83992470 MS.gene65386:CDS
GGTTGGCACGCTAACATTCA+TGG 0.415317 5.2:-83991460 MS.gene65386:CDS
GCTTGCCTCTCCATCGGAGA+TGG 0.422404 5.2:+83991531 None:intergenic
ATGAGCTTGAGTGTGCAAAT+AGG 0.424341 5.2:-83986944 MS.gene65386:CDS
AGAATCGTGATCAGTGGTTA+TGG 0.425259 5.2:+83992022 None:intergenic
CTTGCCTCTCCATCGGAGAT+GGG 0.427432 5.2:+83991532 None:intergenic
GGCCTGAAAACTCAAACATT+TGG 0.440126 5.2:+83991319 None:intergenic
CCATCAGCAATGGGAAGGTT+AGG 0.443830 5.2:-83990993 MS.gene65386:CDS
CGAAGGCAGTGAACCTGATC+GGG 0.445748 5.2:+83992575 None:intergenic
CCAGAATATGTCTGCAAAGA+AGG 0.449302 5.2:+83991298 None:intergenic
CCAACCCTTGTGACTGTTCG+TGG 0.450668 5.2:+83992692 None:intergenic
CGAACTTGTTCCACCCGATC+AGG 0.450679 5.2:-83992588 MS.gene65386:CDS
CACTCGATTCCAAGAGGAGT+TGG 0.457309 5.2:-83991481 MS.gene65386:CDS
TAATTACACTAGTGGCTGTC+AGG 0.463053 5.2:-83990941 MS.gene65386:CDS
AGCCTGTAAAGTGTCAATTA+GGG 0.465989 5.2:+83992520 None:intergenic
GCGTGCCAACCAACTCCTCT+TGG 0.469006 5.2:+83991472 None:intergenic
TTGCAACATCATAAGTTTCA+GGG 0.472255 5.2:+83991079 None:intergenic
GGCTGTCAGGATGAAAGCTT+GGG 0.472435 5.2:-83990928 MS.gene65386:CDS
AATGTGTCTCGCAAATATAC+AGG 0.473103 5.2:+83991738 None:intergenic
GCATCCAAAGCTGAGGATGA+TGG 0.473156 5.2:-83991438 MS.gene65386:CDS
TGGCTGTCAGGATGAAAGCT+TGG 0.476969 5.2:-83990929 MS.gene65386:CDS
ACTTTACAGGCTGCTGGTAT+GGG 0.477051 5.2:-83992509 MS.gene65386:CDS
AAAGCACAACCAAAGAGAAC+AGG 0.481412 5.2:+83992125 None:intergenic
AGATATGCCACTTGCAGAAA+CGG 0.486193 5.2:+83991955 None:intergenic
CATCCAAAGCTGAGGATGAT+GGG 0.487357 5.2:-83991437 MS.gene65386:CDS
CCTAACCTTCCCATTGCTGA+TGG 0.492796 5.2:+83990993 None:intergenic
TATAATGAGATGGAAGAGTA+AGG 0.493011 5.2:+83991253 None:intergenic
TGATGGTTTACACCAGTAAA+GGG 0.493735 5.2:+83992155 None:intergenic
TGAATACTTTGCCAGTATTG+AGG 0.495207 5.2:-83991557 MS.gene65386:CDS
TTCACTGCCTTCGTTCCCAC+CGG 0.499535 5.2:-83992565 MS.gene65386:CDS
CGAGTCTGAAGAGGCTGCTA+AGG 0.500073 5.2:-83992879 MS.gene65386:CDS
ATGATCTCAGGGACAATGAA+TGG 0.501996 5.2:-83991797 MS.gene65386:CDS
CTCGTCACCGTTTCTGCAAG+TGG 0.503151 5.2:-83991962 MS.gene65386:CDS
AATTCCTATGCTCGTCGTGT+TGG 0.505166 5.2:-83992848 MS.gene65386:CDS
TAAGCATATCACGAAACTTA+CGG 0.506729 5.2:-83986967 MS.gene65386:CDS
ATGATGGTTTACACCAGTAA+AGG 0.513575 5.2:+83992154 None:intergenic
AGTGTAATTCAACCTTGCCT+TGG 0.518295 5.2:+83992244 None:intergenic
CTCATTATATACTCAAACGC+TGG 0.519018 5.2:-83991239 MS.gene65386:CDS
GAGACAATTCGTTTGTGCTA+AGG 0.519061 5.2:-83992768 MS.gene65386:CDS
AGCCCAGAAAACATTGGTGA+TGG 0.521427 5.2:+83992271 None:intergenic
AAATGTGAGACAACTTCTCC+TGG 0.528603 5.2:+83991922 None:intergenic
GGAGAACTCCCATCAGCAAT+GGG 0.531715 5.2:-83991002 MS.gene65386:CDS
ATTGACACTTTACAGGCTGC+TGG 0.532057 5.2:-83992515 MS.gene65386:CDS
GTTAGAGTTGTCAGTAAAGG+TGG 0.534829 5.2:-83986862 MS.gene65386:CDS
AGAGAACAGGTTGACCATGA+TGG 0.535460 5.2:+83992138 None:intergenic
CAATTCGTTTGTGCTAAGGA+AGG 0.537258 5.2:-83992764 MS.gene65386:CDS
GAAACCAACACGACGAGCAT+AGG 0.538449 5.2:+83992844 None:intergenic
ACGAAGGCAGTGAACCTGAT+CGG 0.539597 5.2:+83992574 None:intergenic
TATGGTGGTATCAGCAAGGT+TGG 0.539841 5.2:-83992452 MS.gene65386:CDS
CAAGTTAGAGTTGTCAGTAA+AGG 0.539938 5.2:-83986865 MS.gene65386:CDS
TCTGGGCTGACCCCAAGGCA+AGG 0.540324 5.2:-83992256 MS.gene65386:CDS
GATCAGTGGTTATGGAGAGT+GGG 0.543305 5.2:+83992030 None:intergenic
TCTCGTCGTTCTCGCCGCGA+CGG 0.544434 5.2:-83992803 MS.gene65386:CDS
GGGAGAACTCCCATCAGCAA+TGG 0.547438 5.2:-83991003 MS.gene65386:CDS
AATCGCCATAAAAGTTTACA+AGG 0.550036 5.2:-83992392 MS.gene65386:CDS
TGATCAGTGGTTATGGAGAG+TGG 0.550534 5.2:+83992029 None:intergenic
ACACCAGTAAAGGGAGCAAA+GGG 0.551736 5.2:+83992164 None:intergenic
ATAGGAAATGTGAAATGTAC+CGG 0.556375 5.2:-83986926 MS.gene65386:CDS
GTTAACACATTTGTGAAACT+CGG 0.558202 5.2:+83991875 None:intergenic
TCGGATGCTTGCCTCTCCAT+CGG 0.558570 5.2:+83991525 None:intergenic
AATTCGTTTGTGCTAAGGAA+GGG 0.559501 5.2:-83992763 MS.gene65386:CDS
GCGCAGGTAATGCGAAAGGA+GGG 0.559887 5.2:-83991024 MS.gene65386:CDS
GCTATCACTTCGCTGAGTGA+TGG 0.562682 5.2:+83991701 None:intergenic
CGATTCCAAGAGGAGTTGGT+TGG 0.567024 5.2:-83991477 MS.gene65386:CDS
GCATATCTTTAAGCAATGCC+AGG 0.569808 5.2:-83991940 MS.gene65386:CDS
TACACCAGTAAAGGGAGCAA+AGG 0.570161 5.2:+83992163 None:intergenic
ATCAGTGGTTATGGAGAGTG+GGG 0.575873 5.2:+83992031 None:intergenic
CTAACCTTCCCATTGCTGAT+GGG 0.576542 5.2:+83990994 None:intergenic
AAATTTGCCGGTGGGAACGA+AGG 0.578586 5.2:+83992558 None:intergenic
GCCCAGAAAACATTGGTGAT+GGG 0.579481 5.2:+83992272 None:intergenic
TGCACGATTCTTCTGCCAAG+TGG 0.580316 5.2:-83992643 MS.gene65386:CDS
ACATTCCGCTTGCAGGCACT+GGG 0.581089 5.2:-83991763 MS.gene65386:CDS
ATTGAGGACCCCATCTCCGA+TGG 0.581233 5.2:-83991541 MS.gene65386:CDS
CCACGAACAGTCACAAGGGT+TGG 0.582221 5.2:-83992692 MS.gene65386:CDS
ATCATATCTGTCTAAAAGTG+TGG 0.585384 5.2:+83991815 None:intergenic
TTTACTGGTGTAAACCATCA+TGG 0.586662 5.2:-83992152 MS.gene65386:CDS
TGCAACATCATAAGTTTCAG+GGG 0.590648 5.2:+83991080 None:intergenic
CTTCAAAGTTTGGGAACTGG+AGG 0.598863 5.2:+83991898 None:intergenic
AGATGGAAGAGTAAGGACAT+TGG 0.600676 5.2:+83991260 None:intergenic
CGTTTGAGTATATAATGAGA+TGG 0.602082 5.2:+83991243 None:intergenic
CGCAGGTAATGCGAAAGGAG+GGG 0.602168 5.2:-83991023 MS.gene65386:CDS
AACTCCCATCAGCAATGGGA+AGG 0.604290 5.2:-83990998 MS.gene65386:CDS
AAACAGAGAGCAAGTTAGAC+CGG 0.606350 5.2:+83986907 None:intergenic
CAACCCTTGTGACTGTTCGT+GGG 0.608141 5.2:+83992693 None:intergenic
TGCGCAGGTAATGCGAAAGG+AGG 0.609788 5.2:-83991025 MS.gene65386:CDS
TTGCCTCTCCATCGGAGATG+GGG 0.612305 5.2:+83991533 None:intergenic
CAGATCCAGAAATTTGCCGG+TGG 0.612578 5.2:+83992549 None:intergenic
TTTAGACAGATATGATCTCA+GGG 0.617719 5.2:-83991808 MS.gene65386:CDS
AACGCCCACGAACAGTCACA+AGG 0.617810 5.2:-83992697 MS.gene65386:CDS
AATCATGCTAATTACACTAG+TGG 0.620695 5.2:-83990949 MS.gene65386:CDS
ATCCAAAGCTGAGGATGATG+GGG 0.622295 5.2:-83991436 MS.gene65386:CDS
AGATCCAGAAATTTGCCGGT+GGG 0.622920 5.2:+83992550 None:intergenic
TATGGAATTCGAGTCTGAAG+AGG 0.624053 5.2:-83992888 MS.gene65386:CDS
CTTGGGAGAGCATATGAATG+AGG 0.624492 5.2:-83990911 MS.gene65386:intron
CAAATTTAAAGGCTTCATGT+CGG 0.625446 5.2:+83991121 None:intergenic
CAGCAAGGTTGGCTTTACTG+AGG 0.625913 5.2:-83992441 MS.gene65386:CDS
CAGTGGTTATGGAGAGTGGG+GGG 0.627461 5.2:+83992033 None:intergenic
TGTGTTGAAAAGCCAGACAA+AGG 0.628839 5.2:+83992079 None:intergenic
GGACCCCATCTCCGATGGAG+AGG 0.629360 5.2:-83991536 MS.gene65386:CDS
ATTAAGATAAGCATGAAAGA+CGG 0.631649 5.2:-83986834 MS.gene65386:CDS
AGGCAGTGAACCTGATCGGG+TGG 0.632274 5.2:+83992578 None:intergenic
AGGTACCCAGTGCCTGCAAG+CGG 0.638903 5.2:+83991758 None:intergenic
CAAAGCTGAGGATGATGGGG+AGG 0.640907 5.2:-83991433 MS.gene65386:CDS
GGGGTCAGCCCAGAAAACAT+TGG 0.643984 5.2:+83992265 None:intergenic
AGAAACGGTGACGAGTGTCT+GGG 0.645500 5.2:+83991970 None:intergenic
TGGGAATACTTGCATTATAG+CGG 0.646366 5.2:+83991989 None:intergenic
TGAAACTTATGATGTTGCAA+AGG 0.650987 5.2:-83991076 MS.gene65386:CDS
AGCATGAAAGACGGCCTCTG+AGG 0.655501 5.2:-83986825 None:intergenic
TTGATTGTAGGAATTACATG+AGG 0.657971 5.2:-83992418 MS.gene65386:CDS
AGTTGCGCAGGTAATGCGAA+AGG 0.657991 5.2:-83991028 MS.gene65386:CDS
AATGACAGAATCGTGATCAG+TGG 0.660094 5.2:+83992016 None:intergenic
TCATGTAGCTAAATTTGGAG+AGG 0.661413 5.2:-83991400 MS.gene65386:CDS
TCAGTGGTTATGGAGAGTGG+GGG 0.663708 5.2:+83992032 None:intergenic
ATTCATGGCATCCAAAGCTG+AGG 0.668434 5.2:-83991445 MS.gene65386:CDS
GAAGCCAGATACGATCCACT+TGG 0.669193 5.2:+83992628 None:intergenic
TCAAGGTGATCTTGATGACG+AGG 0.673752 5.2:-83992300 MS.gene65386:CDS
AGAGTATGGTGGTATCAGCA+AGG 0.675333 5.2:-83992456 MS.gene65386:CDS
GTAATCGATACCTGTTAGAG+CGG 0.683465 5.2:+83992186 None:intergenic
GCACTCATCAAAGAGTATGG+TGG 0.683994 5.2:-83992467 MS.gene65386:CDS
CAATGAGAAAGAAGTAAGAG+CGG 0.684122 5.2:-83991592 MS.gene65386:CDS
TGTAATTCAACCTTGCCTTG+GGG 0.693919 5.2:+83992246 None:intergenic
ACGCCCACGAACAGTCACAA+GGG 0.715179 5.2:-83992696 MS.gene65386:CDS
TCTGAATGATAGCTCCGTCG+CGG 0.754566 5.2:+83992789 None:intergenic
AGTGCAGACATAATTCTGCG+AGG 0.756220 5.2:+83992485 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATAAAAAAAAAAAAAAA+TGG + chr5.2:83991861-83991880 None:intergenic 0.0%
!!! ATTTTTTTTTTTTTTTATAT+TGG - chr5.2:83991860-83991879 MS.gene65386:CDS 0.0%
!! ATTAGAAGAAAAAAAAAAAT+AGG + chr5.2:83991192-83991211 None:intergenic 10.0%
!! TTAGAAGAAAAAAAAAAATA+GGG + chr5.2:83991191-83991210 None:intergenic 10.0%
!!! AAATTTTTTTTTACATCAAT+TGG - chr5.2:83989652-83989671 MS.gene65386:intron 10.0%
!!! ATTACTTTTAAATGATATTT+TGG + chr5.2:83991294-83991313 None:intergenic 10.0%
!! AAAACCATATAATTCTAATT+TGG + chr5.2:83990381-83990400 None:intergenic 15.0%
!! AAACCATATAATTCTAATTT+GGG + chr5.2:83990380-83990399 None:intergenic 15.0%
!! AATGTTGAATAATAATGATA+TGG - chr5.2:83992486-83992505 MS.gene65386:CDS 15.0%
!! ATAGCTTATTATATTTAACT+AGG - chr5.2:83992225-83992244 MS.gene65386:CDS 15.0%
!! ATTGTATCAAAATCAATATT+TGG + chr5.2:83989620-83989639 None:intergenic 15.0%
!! TATGATGATTATATATTAGT+AGG + chr5.2:83989327-83989346 None:intergenic 15.0%
!!! ACATTTTGTGTTTTAATATT+GGG - chr5.2:83990540-83990559 MS.gene65386:intron 15.0%
!!! ATATACCAATAAAACTATTT+TGG + chr5.2:83992026-83992045 None:intergenic 15.0%
!!! ATATGGTTTTGAATTAATTA+AGG - chr5.2:83990391-83990410 MS.gene65386:intron 15.0%
!!! ATTTTATTTGTACATATTCA+GGG - chr5.2:83989533-83989552 MS.gene65386:intron 15.0%
!!! GTTTTTTTTTTTTGTTACAA+CGG - chr5.2:83992123-83992142 MS.gene65386:CDS 15.0%
!!! TATACCAATAAAACTATTTT+GGG + chr5.2:83992025-83992044 None:intergenic 15.0%
!!! TTTTGTCTAATAGATTATAT+CGG - chr5.2:83992631-83992650 MS.gene65386:CDS 15.0%
!! AAAAATGTTGAGTATTTGAA+CGG - chr5.2:83992093-83992112 MS.gene65386:CDS 20.0%
!! AAGTAATGTGAACTAATATT+TGG - chr5.2:83991307-83991326 MS.gene65386:CDS 20.0%
!! ACCTTTATCAACAAATTTAA+AGG + chr5.2:83988607-83988626 None:intergenic 20.0%
!! TAAGAAAATAAATCAGATTG+AGG + chr5.2:83991099-83991118 None:intergenic 20.0%
!! TAAGGAATTTATCTTTCAAA+AGG + chr5.2:83989854-83989873 None:intergenic 20.0%
!! TCATGTATATACTTACTATT+TGG - chr5.2:83988542-83988561 MS.gene65386:intron 20.0%
!! TTAATTTAATACCCATTGAT+TGG - chr5.2:83991506-83991525 MS.gene65386:CDS 20.0%
!!! AAAGAAGAAATTAGGATTTT+GGG + chr5.2:83987389-83987408 None:intergenic 20.0%
!!! AATCTGATTTATTTTCTTAC+TGG - chr5.2:83991100-83991119 MS.gene65386:CDS 20.0%
!!! AATGTTGTTAATGATGTTTT+TGG + chr5.2:83990926-83990945 None:intergenic 20.0%
!!! ACGTTTTAAAAAAATTCACT+AGG + chr5.2:83991941-83991960 None:intergenic 20.0%
!!! ATCTGATTTATTTTCTTACT+GGG - chr5.2:83991101-83991120 MS.gene65386:CDS 20.0%
!!! CACATTTTGTGTTTTAATAT+TGG - chr5.2:83990539-83990558 MS.gene65386:intron 20.0%
!!! CATTTTATTTGTACATATTC+AGG - chr5.2:83989532-83989551 MS.gene65386:intron 20.0%
!!! TTAGTTTTCTTTTTTCTCTT+AGG - chr5.2:83990296-83990315 MS.gene65386:intron 20.0%
!!! TTTTATTTGTACATATTCAG+GGG - chr5.2:83989534-83989553 MS.gene65386:intron 20.0%
! AATAATGATATGGAAAGAGA+GGG - chr5.2:83992496-83992515 MS.gene65386:CDS 25.0%
! ACATATCATGTAGCTAAATT+TGG - chr5.2:83988309-83988328 MS.gene65386:intron 25.0%
! AGAATATTATGATAGATGAG+TGG + chr5.2:83991249-83991268 None:intergenic 25.0%
! ATTAAGATAAGCATGAAAGA+CGG - chr5.2:83992880-83992899 MS.gene65386:CDS 25.0%
! CTTAATATCTAATATCTTGC+AGG - chr5.2:83992714-83992733 MS.gene65386:CDS 25.0%
! TAATAATGATATGGAAAGAG+AGG - chr5.2:83992495-83992514 MS.gene65386:CDS 25.0%
! TCACCCAAATTAGAATTATA+TGG - chr5.2:83990374-83990393 MS.gene65386:intron 25.0%
! TGGAAAGAATAACTCTATAA+AGG + chr5.2:83991458-83991477 None:intergenic 25.0%
!! AAATTAGGGTTAGTGTAAAT+TGG - chr5.2:83991824-83991843 MS.gene65386:CDS 25.0%
!! AATTAGGGTTAGTGTAAATT+GGG - chr5.2:83991825-83991844 MS.gene65386:CDS 25.0%
!! AATTTTTCTTGTGTAAAGCT+CGG + chr5.2:83988211-83988230 None:intergenic 25.0%
!! ATATTTTTCTTTATGCCCTA+AGG + chr5.2:83990460-83990479 None:intergenic 25.0%
!! CAAAGAAGAAATTAGGATTT+TGG + chr5.2:83987390-83987409 None:intergenic 25.0%
!! CATTTTACAAATGTATGCTT+CGG + chr5.2:83991357-83991376 None:intergenic 25.0%
!! CTTAAAGAACTGATTTAAAC+TGG + chr5.2:83988076-83988095 None:intergenic 25.0%
!! TATTTTTCTTTATGCCCTAA+GGG + chr5.2:83990459-83990478 None:intergenic 25.0%
!! TTTCATTGATTGAACAAAGT+TGG - chr5.2:83989828-83989847 MS.gene65386:intron 25.0%
!!! AGGTTGAATTACACTTTTTT+CGG - chr5.2:83987478-83987497 MS.gene65386:intron 25.0%
!!! GCCTTTAAATTTGTTGATAA+AGG - chr5.2:83988603-83988622 MS.gene65386:intron 25.0%
!!! TACTCCCAAAATAGTTTTAT+TGG - chr5.2:83992018-83992037 MS.gene65386:CDS 25.0%
!!! TCATCTTTTAAGAACCAAAT+TGG - chr5.2:83989765-83989784 MS.gene65386:intron 25.0%
AATCATGCTAATTACACTAG+TGG - chr5.2:83988765-83988784 MS.gene65386:intron 30.0%
AATCGCCATAAAAGTTTACA+AGG - chr5.2:83987322-83987341 MS.gene65386:intron 30.0%
AATCGTGAATTATGTGACTA+TGG - chr5.2:83992352-83992371 MS.gene65386:CDS 30.0%
ACAAGACTCATAACTCAAAA+TGG + chr5.2:83989401-83989420 None:intergenic 30.0%
ACATAGTAACATAATTCGCT+GGG - chr5.2:83991541-83991560 MS.gene65386:CDS 30.0%
ACATCAAAATGTGAAGTTCT+TGG + chr5.2:83990227-83990246 None:intergenic 30.0%
ATACTTCAGTGACTTAGAAA+TGG + chr5.2:83990870-83990889 None:intergenic 30.0%
ATAGCACTCAACAAAAATGA+AGG + chr5.2:83989277-83989296 None:intergenic 30.0%
ATAGGAAATGTGAAATGTAC+CGG - chr5.2:83992788-83992807 MS.gene65386:CDS 30.0%
ATATGGAGACAAGAAAAAAC+AGG - chr5.2:83990696-83990715 MS.gene65386:intron 30.0%
ATCATATCTGTCTAAAAGTG+TGG + chr5.2:83987902-83987921 None:intergenic 30.0%
ATGAGGAAGATGATGAAATT+AGG - chr5.2:83991809-83991828 MS.gene65386:CDS 30.0%
ATGTTTAGCAATTCAGCATT+GGG + chr5.2:83991902-83991921 None:intergenic 30.0%
CAAATTTAAAGGCTTCATGT+CGG + chr5.2:83988596-83988615 None:intergenic 30.0%
CAACAAAAATGAAGGTCAAA+GGG + chr5.2:83989269-83989288 None:intergenic 30.0%
CAACTTTATTGGAAGAATGA+TGG + chr5.2:83989055-83989074 None:intergenic 30.0%
CAGTTAGAACCTTAATGTTT+GGG - chr5.2:83990066-83990085 MS.gene65386:intron 30.0%
CCAAACTATTAAAAGAGGTT+TGG + chr5.2:83991054-83991073 None:intergenic 30.0%
CGTTTGAGTATATAATGAGA+TGG + chr5.2:83988474-83988493 None:intergenic 30.0%
GATCGAACTTATCATCAATT+AGG - chr5.2:83989718-83989737 MS.gene65386:intron 30.0%
GCACTGAAATTCAACTTTAT+TGG + chr5.2:83989066-83989085 None:intergenic 30.0%
GGTTAAAAACAACCGTAAAA+TGG + chr5.2:83988837-83988856 None:intergenic 30.0%
GTTAACACATTTGTGAAACT+CGG + chr5.2:83987842-83987861 None:intergenic 30.0%
TAAAACCATAGACATGTAGA+AGG + chr5.2:83989361-83989380 None:intergenic 30.0%
TAAGCATATCACGAAACTTA+CGG - chr5.2:83992747-83992766 MS.gene65386:CDS 30.0%
TAATATCTTGCAGGATGATA+TGG - chr5.2:83992723-83992742 MS.gene65386:CDS 30.0%
TATAATGAGATGGAAGAGTA+AGG + chr5.2:83988464-83988483 None:intergenic 30.0%
TATATCTCTATTCTCTAGCA+TGG + chr5.2:83988914-83988933 None:intergenic 30.0%
TATGGAGACAAGAAAAAACA+GGG - chr5.2:83990697-83990716 MS.gene65386:intron 30.0%
TATGTTTAGCAATTCAGCAT+TGG + chr5.2:83991903-83991922 None:intergenic 30.0%
TCAACAAAAATGAAGGTCAA+AGG + chr5.2:83989270-83989289 None:intergenic 30.0%
TCAAGCCAAACTATTAAAAG+AGG + chr5.2:83991059-83991078 None:intergenic 30.0%
TCAGACAATATCCAATCAAT+GGG + chr5.2:83991520-83991539 None:intergenic 30.0%
TCAGTTAGAACCTTAATGTT+TGG - chr5.2:83990065-83990084 MS.gene65386:intron 30.0%
TGAAACTTATGATGTTGCAA+AGG - chr5.2:83988638-83988657 MS.gene65386:intron 30.0%
TGAACAGCAAAGAAGAAATT+AGG + chr5.2:83987397-83987416 None:intergenic 30.0%
TGAGGAAGATGATGAAATTA+GGG - chr5.2:83991810-83991829 MS.gene65386:CDS 30.0%
TTGATTGTAGGAATTACATG+AGG - chr5.2:83987296-83987315 MS.gene65386:intron 30.0%
TTGCAACATCATAAGTTTCA+GGG + chr5.2:83988638-83988657 None:intergenic 30.0%
TTTAGACAGATATGATCTCA+GGG - chr5.2:83987906-83987925 MS.gene65386:intron 30.0%
TTTGCAACATCATAAGTTTC+AGG + chr5.2:83988639-83988658 None:intergenic 30.0%
! ACAAATGCACAAAATTTTGG+TGG - chr5.2:83990658-83990677 MS.gene65386:intron 30.0%
! AGCACAAATGCACAAAATTT+TGG - chr5.2:83990655-83990674 MS.gene65386:intron 30.0%
! ATTTGCAATGTTTTTCCCTT+AGG - chr5.2:83990441-83990460 MS.gene65386:intron 30.0%
! ATTTTGTTCTTACGTGCATT+TGG - chr5.2:83992457-83992476 MS.gene65386:CDS 30.0%
! CCAAACCTCTTTTAATAGTT+TGG - chr5.2:83991051-83991070 MS.gene65386:CDS 30.0%
! GTTCTACATTCTTTTCTACT+AGG - chr5.2:83991159-83991178 MS.gene65386:CDS 30.0%
! TTTGCAATGTTTTTCCCTTA+GGG - chr5.2:83990442-83990461 MS.gene65386:intron 30.0%
! TTTTAGACAGATATGATCTC+AGG - chr5.2:83987905-83987924 MS.gene65386:intron 30.0%
! TTTTATGTTCTCCGTTAACT+CGG - chr5.2:83990181-83990200 MS.gene65386:intron 30.0%
!! AATTTCTTCTTTGCTGTTCA+AGG - chr5.2:83987397-83987416 MS.gene65386:intron 30.0%
!!! ATATTTGTGAAAGCGCTTTT+TGG + chr5.2:83992437-83992456 None:intergenic 30.0%
!!! ATTTGACACTGCTGTTTTTT+GGG + chr5.2:83990895-83990914 None:intergenic 30.0%
!!! GTTTGGCTTGAAGTTTTATT+TGG - chr5.2:83991068-83991087 MS.gene65386:CDS 30.0%
AAAATGTGAAGTTCTTGGTC+AGG + chr5.2:83990222-83990241 None:intergenic 35.0%
AAATGTGAAGTTCTTGGTCA+GGG + chr5.2:83990221-83990240 None:intergenic 35.0%
AACCCTAATTGACACTTTAC+AGG - chr5.2:83987192-83987211 MS.gene65386:intron 35.0%
AAGTTCGTTAGAGGGAAAAA+TGG - chr5.2:83989947-83989966 MS.gene65386:intron 35.0%
AAGTTGAATTTCAGTGCACA+AGG - chr5.2:83989069-83989088 MS.gene65386:intron 35.0%
AATCTTCACCAAATAGCTTG+CGG - chr5.2:83988946-83988965 MS.gene65386:intron 35.0%
AATGTGTCTCGCAAATATAC+AGG + chr5.2:83987979-83987998 None:intergenic 35.0%
AATTCGTTTGTGCTAAGGAA+GGG - chr5.2:83986951-83986970 MS.gene65386:CDS 35.0%
AGAAAATGTGCAATTCCAGA+TGG - chr5.2:83990023-83990042 MS.gene65386:intron 35.0%
AGCATGAACTCTTACTTTGA+TGG - chr5.2:83988033-83988052 MS.gene65386:intron 35.0%
AGTGTAAATTGGGCTTATCT+GGG - chr5.2:83991835-83991854 MS.gene65386:CDS 35.0%
AGTTCGTTAGAGGGAAAAAT+GGG - chr5.2:83989948-83989967 MS.gene65386:intron 35.0%
ATGATAAGTTCGATCTTCAG+AGG + chr5.2:83989713-83989732 None:intergenic 35.0%
ATGATGGTTTACACCAGTAA+AGG + chr5.2:83987563-83987582 None:intergenic 35.0%
ATGGAGACAAGAAAAAACAG+GGG - chr5.2:83990698-83990717 MS.gene65386:intron 35.0%
ATTAAGGATGCATACTGTGT+TGG - chr5.2:83990407-83990426 MS.gene65386:intron 35.0%
CAAGTTAGAGTTGTCAGTAA+AGG - chr5.2:83992849-83992868 MS.gene65386:CDS 35.0%
CAATGAGAAAGAAGTAAGAG+CGG - chr5.2:83988122-83988141 MS.gene65386:intron 35.0%
CACATAGTAACATAATTCGC+TGG - chr5.2:83991540-83991559 MS.gene65386:CDS 35.0%
CTCATTATATACTCAAACGC+TGG - chr5.2:83988475-83988494 MS.gene65386:intron 35.0%
CTTACCTTGAGAGCTAAAAA+GGG + chr5.2:83989217-83989236 None:intergenic 35.0%
CTTTATTGGAAGAATGATGG+TGG + chr5.2:83989052-83989071 None:intergenic 35.0%
GAAGAAACAGAAACTGGATT+TGG - chr5.2:83991768-83991787 MS.gene65386:CDS 35.0%
GACACGCAGAATATATTAGA+AGG + chr5.2:83992527-83992546 None:intergenic 35.0%
GACTCATAACTCAAAATGGT+TGG + chr5.2:83989397-83989416 None:intergenic 35.0%
GCTTGAAGTACACATCAATT+TGG - chr5.2:83989674-83989693 MS.gene65386:intron 35.0%
GTCAGACAATATCCAATCAA+TGG + chr5.2:83991521-83991540 None:intergenic 35.0%
GTGGTTATGCAAGACAATAT+AGG + chr5.2:83991230-83991249 None:intergenic 35.0%
GTGTTGAATGAGTGTTTCAT+AGG + chr5.2:83989464-83989483 None:intergenic 35.0%
TACTTTCAGTTGTACAGCTT+AGG - chr5.2:83989176-83989195 MS.gene65386:intron 35.0%
TAGTGTAAATTGGGCTTATC+TGG - chr5.2:83991834-83991853 MS.gene65386:CDS 35.0%
TCATGTAGCTAAATTTGGAG+AGG - chr5.2:83988314-83988333 MS.gene65386:intron 35.0%
TGAATACTTTGCCAGTATTG+AGG - chr5.2:83988157-83988176 MS.gene65386:intron 35.0%
TGATGGTTTACACCAGTAAA+GGG + chr5.2:83987562-83987581 None:intergenic 35.0%
TGCAACATCATAAGTTTCAG+GGG + chr5.2:83988637-83988656 None:intergenic 35.0%
TGCTAACCACTTTATCATAG+AGG + chr5.2:83989007-83989026 None:intergenic 35.0%
TGGGAATACTTGCATTATAG+CGG + chr5.2:83987728-83987747 None:intergenic 35.0%
TTAAGGATGCATACTGTGTT+GGG - chr5.2:83990408-83990427 MS.gene65386:intron 35.0%
TTAGAGCCTCTATGATAAAG+TGG - chr5.2:83988998-83989017 MS.gene65386:intron 35.0%
TTCCTTATCCATTATCCCTT+AGG - chr5.2:83989867-83989886 MS.gene65386:intron 35.0%
TTCTCTGTACCCAAACATTA+AGG + chr5.2:83990078-83990097 None:intergenic 35.0%
TTTACTGGTGTAAACCATCA+TGG - chr5.2:83987562-83987581 MS.gene65386:intron 35.0%
! AAGAAATGAGAGAAAGCACA+TGG + chr5.2:83992586-83992605 None:intergenic 35.0%
! AATTTTCACTCGATTCCAAG+AGG - chr5.2:83988227-83988246 MS.gene65386:intron 35.0%
! AGAAATGAGAGAAAGCACAT+GGG + chr5.2:83992585-83992604 None:intergenic 35.0%
! AGCCTGTAAAGTGTCAATTA+GGG + chr5.2:83987197-83987216 None:intergenic 35.0%
! ATGTGGTATGTTGTGGATTT+TGG - chr5.2:83990599-83990618 MS.gene65386:intron 35.0%
! GAGGTCAGAATTCCATTTTA+CGG - chr5.2:83988822-83988841 MS.gene65386:intron 35.0%
! GAGTAACTAGCTTCTCAATT+GGG + chr5.2:83989513-83989532 None:intergenic 35.0%
! GTTTTTAACCTGTTCTACGA+TGG - chr5.2:83988847-83988866 MS.gene65386:intron 35.0%
! TAAGCACATCATGATGATGA+TGG + chr5.2:83991478-83991497 None:intergenic 35.0%
! TGAGTAACTAGCTTCTCAAT+TGG + chr5.2:83989514-83989533 None:intergenic 35.0%
! TGATCTAAGATAACTCCATC+TGG + chr5.2:83990041-83990060 None:intergenic 35.0%
! TGTCGCCTTGTAAACTTTTA+TGG + chr5.2:83987330-83987349 None:intergenic 35.0%
! TTTTCTTGCTTTACTGAAGC+TGG - chr5.2:83991403-83991422 MS.gene65386:CDS 35.0%
!! ACTGAATTGACTTGTAGATG+TGG - chr5.2:83990582-83990601 MS.gene65386:intron 35.0%
!! GTGCATTTTGACAGATAAAG+AGG + chr5.2:83987056-83987075 None:intergenic 35.0%
!! TGCCAAATGTTTGAGTTTTC+AGG - chr5.2:83988393-83988412 MS.gene65386:intron 35.0%
!!! CATTTGACACTGCTGTTTTT+TGG + chr5.2:83990896-83990915 None:intergenic 35.0%
AAAAAACAGGGGTTCCACTT+TGG - chr5.2:83990709-83990728 MS.gene65386:intron 40.0%
AAACAGAAACTGGATTTGGC+TGG - chr5.2:83991772-83991791 MS.gene65386:CDS 40.0%
AAACAGAGAGCAAGTTAGAC+CGG + chr5.2:83992810-83992829 None:intergenic 40.0%
AAACCTTTGGACTTGATGTG+TGG + chr5.2:83989116-83989135 None:intergenic 40.0%
AAACTGAAGCTTCCTTTGTC+TGG - chr5.2:83987623-83987642 MS.gene65386:intron 40.0%
AAAGCACAACCAAAGAGAAC+AGG + chr5.2:83987592-83987611 None:intergenic 40.0%
AAATGTGAGACAACTTCTCC+TGG + chr5.2:83987795-83987814 None:intergenic 40.0%
AACTCACCTCTACTATCCAT+TGG + chr5.2:83989924-83989943 None:intergenic 40.0%
AATAGCCCAATGGATAGTAG+AGG - chr5.2:83989915-83989934 MS.gene65386:intron 40.0%
AATGACAGAATCGTGATCAG+TGG + chr5.2:83987701-83987720 None:intergenic 40.0%
AATGGATAGTAGAGGTGAGT+TGG - chr5.2:83989923-83989942 MS.gene65386:intron 40.0%
AATGTGAAGTTCTTGGTCAG+GGG + chr5.2:83990220-83990239 None:intergenic 40.0%
ACATAATTCACGATTCGTCC+TGG + chr5.2:83992347-83992366 None:intergenic 40.0%
ACTCACCTCTACTATCCATT+GGG + chr5.2:83989923-83989942 None:intergenic 40.0%
AGAAGAACATGAGAAGAGAG+TGG - chr5.2:83991740-83991759 MS.gene65386:CDS 40.0%
AGAATCGTGATCAGTGGTTA+TGG + chr5.2:83987695-83987714 None:intergenic 40.0%
AGAATGTAGAACCTCGTCTT+TGG + chr5.2:83991151-83991170 None:intergenic 40.0%
AGATGGAAGAGTAAGGACAT+TGG + chr5.2:83988457-83988476 None:intergenic 40.0%
AGTGATAGGAACCGAGTTAA+CGG + chr5.2:83990195-83990214 None:intergenic 40.0%
AGTGTAATTCAACCTTGCCT+TGG + chr5.2:83987473-83987492 None:intergenic 40.0%
ATAACATGCCATCGTAGAAC+AGG + chr5.2:83988858-83988877 None:intergenic 40.0%
ATCTCAGTGCACTACCAATT+TGG + chr5.2:83989782-83989801 None:intergenic 40.0%
ATCTCTATTCTCTAGCATGG+TGG + chr5.2:83988911-83988930 None:intergenic 40.0%
ATGAGCTTGAGTGTGCAAAT+AGG - chr5.2:83992770-83992789 MS.gene65386:CDS 40.0%
ATGATCTCAGGGACAATGAA+TGG - chr5.2:83987917-83987936 MS.gene65386:intron 40.0%
CAATTCGTTTGTGCTAAGGA+AGG - chr5.2:83986950-83986969 MS.gene65386:CDS 40.0%
CACGCTACATCAGAAGAATT+CGG + chr5.2:83992304-83992323 None:intergenic 40.0%
CCAGAATATGTCTGCAAAGA+AGG + chr5.2:83988419-83988438 None:intergenic 40.0%
CCATAAAGAGAATAGCCCAA+TGG - chr5.2:83989905-83989924 MS.gene65386:intron 40.0%
CCATTGGGCTATTCTCTTTA+TGG + chr5.2:83989908-83989927 None:intergenic 40.0%
CCTTACCTTGAGAGCTAAAA+AGG + chr5.2:83989218-83989237 None:intergenic 40.0%
CCTTCTTTGCAGACATATTC+TGG - chr5.2:83988416-83988435 MS.gene65386:intron 40.0%
CTCGTTTATACGGATACTCA+CGG + chr5.2:83991667-83991686 None:intergenic 40.0%
CTTGTAGATGTGGTATGTTG+TGG - chr5.2:83990592-83990611 MS.gene65386:intron 40.0%
GAAACTCGGCTTCAAAGTTT+GGG + chr5.2:83987828-83987847 None:intergenic 40.0%
GACTATGGTCTGATAGTTGT+TGG - chr5.2:83992367-83992386 MS.gene65386:CDS 40.0%
GAGACAATTCGTTTGTGCTA+AGG - chr5.2:83986946-83986965 MS.gene65386:CDS 40.0%
GAGAGTGAAGAAACAGAAAC+TGG - chr5.2:83991762-83991781 MS.gene65386:CDS 40.0%
GCATATCTTTAAGCAATGCC+AGG - chr5.2:83987774-83987793 MS.gene65386:intron 40.0%
GGAAAAATGGGAAACACATG+TGG - chr5.2:83989960-83989979 MS.gene65386:intron 40.0%
GGCAACAATTCAGTGTGATA+TGG - chr5.2:83990679-83990698 MS.gene65386:intron 40.0%
GGCCTGAAAACTCAAACATT+TGG + chr5.2:83988398-83988417 None:intergenic 40.0%
GTAATCGATACCTGTTAGAG+CGG + chr5.2:83987531-83987550 None:intergenic 40.0%
GTGTAATTCAACCTTGCCTT+GGG + chr5.2:83987472-83987491 None:intergenic 40.0%
GTTAGAGTTGTCAGTAAAGG+TGG - chr5.2:83992852-83992871 MS.gene65386:CDS 40.0%
TAATTACACTAGTGGCTGTC+AGG - chr5.2:83988773-83988792 MS.gene65386:intron 40.0%
TCTGCACTCATCAAAGAGTA+TGG - chr5.2:83987244-83987263 MS.gene65386:intron 40.0%
TGAAACTCGGCTTCAAAGTT+TGG + chr5.2:83987829-83987848 None:intergenic 40.0%
TGTAATTCAACCTTGCCTTG+GGG + chr5.2:83987471-83987490 None:intergenic 40.0%
TGTGTCCTTCTACATGTCTA+TGG - chr5.2:83989353-83989372 MS.gene65386:intron 40.0%
TGTGTTGAAAAGCCAGACAA+AGG + chr5.2:83987638-83987657 None:intergenic 40.0%
TTCTTACGTGCATTTGGTTG+AGG - chr5.2:83992463-83992482 MS.gene65386:CDS 40.0%
TTGACGAATTTGAGTCTTGC+TGG - chr5.2:83987875-83987894 MS.gene65386:intron 40.0%
TTGCAGATCCAGAAATTTGC+CGG + chr5.2:83987171-83987190 None:intergenic 40.0%
! AGATATGCCACTTGCAGAAA+CGG + chr5.2:83987762-83987781 None:intergenic 40.0%
! ATCCCATCACCAATGTTTTC+TGG - chr5.2:83987440-83987459 MS.gene65386:intron 40.0%
! CAGCCTGTAAAGTGTCAATT+AGG + chr5.2:83987198-83987217 None:intergenic 40.0%
! CATCAAGTCCAAAGGTTTTG+TGG - chr5.2:83989118-83989137 MS.gene65386:intron 40.0%
! GAAATGAGAGAAAGCACATG+GGG + chr5.2:83992584-83992603 None:intergenic 40.0%
! GCTTTACTGAGGTTGATTGT+AGG - chr5.2:83987284-83987303 MS.gene65386:intron 40.0%
! TCCCATCACCAATGTTTTCT+GGG - chr5.2:83987441-83987460 MS.gene65386:intron 40.0%
!! GACCTAAGGGATAATGGATA+AGG + chr5.2:83989872-83989891 None:intergenic 40.0%
!! TCCAAAGGTTTTGTGGATGA+GGG - chr5.2:83989125-83989144 MS.gene65386:intron 40.0%
!! TGACTTAGAAATGGTGCCAT+TGG + chr5.2:83990861-83990880 None:intergenic 40.0%
!! TTCCACTTTGGTGCCATTAA+TGG - chr5.2:83990721-83990740 MS.gene65386:intron 40.0%
!! TTCTCTAGCATGGTGGATTA+AGG + chr5.2:83988904-83988923 None:intergenic 40.0%
!! TTGCAAACTGACGTTGCTTT+TGG + chr5.2:83988511-83988530 None:intergenic 40.0%
!!! CCTTTTTAGCTCTCAAGGTA+AGG - chr5.2:83989215-83989234 MS.gene65386:intron 40.0%
!!! CTCTGTTTTGAAAGCTGTTG+AGG - chr5.2:83992822-83992841 MS.gene65386:CDS 40.0%
!!! GGTAGTTTTGACTTGTGTGT+TGG - chr5.2:83989090-83989109 MS.gene65386:intron 40.0%
!!! TTGTCTGGCTTTTCAACACA+TGG - chr5.2:83987638-83987657 MS.gene65386:intron 40.0%
AAACTGGATTTGGCTGGTAG+CGG - chr5.2:83991778-83991797 MS.gene65386:CDS 45.0%
AAATTTCGCCACGAATTGGG+GGG + chr5.2:83991629-83991648 None:intergenic 45.0%
AAGCAATACATTCCGCTTGC+AGG - chr5.2:83987944-83987963 MS.gene65386:intron 45.0%
AATTCCTATGCTCGTCGTGT+TGG - chr5.2:83986866-83986885 MS.gene65386:CDS 45.0%
ACACCAGTAAAGGGAGCAAA+GGG + chr5.2:83987553-83987572 None:intergenic 45.0%
ACACTACTTACCGCTCTAAC+AGG - chr5.2:83987518-83987537 MS.gene65386:intron 45.0%
ACCCTATCAGAGAGACCTAA+GGG + chr5.2:83989885-83989904 None:intergenic 45.0%
ACTTTACAGGCTGCTGGTAT+GGG - chr5.2:83987205-83987224 MS.gene65386:intron 45.0%
AGAAGAATTCGGTACGCATG+GGG + chr5.2:83992293-83992312 None:intergenic 45.0%
AGAGTATGGTGGTATCAGCA+AGG - chr5.2:83987258-83987277 MS.gene65386:intron 45.0%
AGATCCAGAAATTTGCCGGT+GGG + chr5.2:83987167-83987186 None:intergenic 45.0%
AGCCCAGAAAACATTGGTGA+TGG + chr5.2:83987446-83987465 None:intergenic 45.0%
AGTGCAGACATAATTCTGCG+AGG + chr5.2:83987232-83987251 None:intergenic 45.0%
ATCAGTGGTTATGGAGAGTG+GGG + chr5.2:83987686-83987705 None:intergenic 45.0%
ATCCAAAGCTGAGGATGATG+GGG - chr5.2:83988278-83988297 MS.gene65386:intron 45.0%
ATCCCTTAGGTCTCTCTGAT+AGG - chr5.2:83989880-83989899 MS.gene65386:intron 45.0%
ATTCATGGCATCCAAAGCTG+AGG - chr5.2:83988269-83988288 MS.gene65386:intron 45.0%
ATTGACACTTTACAGGCTGC+TGG - chr5.2:83987199-83987218 MS.gene65386:intron 45.0%
CAAATTTCGCCACGAATTGG+GGG + chr5.2:83991630-83991649 None:intergenic 45.0%
CAGAAGAATTCGGTACGCAT+GGG + chr5.2:83992294-83992313 None:intergenic 45.0%
CAGAGAGACCTAAGGGATAA+TGG + chr5.2:83989878-83989897 None:intergenic 45.0%
CATCCAAAGCTGAGGATGAT+GGG - chr5.2:83988277-83988296 MS.gene65386:intron 45.0%
CATGGTCAACCTGTTCTCTT+TGG - chr5.2:83987580-83987599 MS.gene65386:intron 45.0%
CCAATTCGTGGCGAAATTTG+CGG - chr5.2:83991630-83991649 MS.gene65386:CDS 45.0%
CGCAAATTTCGCCACGAATT+GGG + chr5.2:83991632-83991651 None:intergenic 45.0%
CTAACCTTCCCATTGCTGAT+GGG + chr5.2:83988723-83988742 None:intergenic 45.0%
CTCTCCATCGCTCGTTTATA+CGG + chr5.2:83991677-83991696 None:intergenic 45.0%
CTTCAAAGTTTGGGAACTGG+AGG + chr5.2:83987819-83987838 None:intergenic 45.0%
CTTGAAACTGATCCCACGTT+GGG + chr5.2:83990973-83990992 None:intergenic 45.0%
GAGTTGGCAAGTTCGTTAGA+GGG - chr5.2:83989939-83989958 MS.gene65386:intron 45.0%
GATCAGTGGTTATGGAGAGT+GGG + chr5.2:83987687-83987706 None:intergenic 45.0%
GCAAATTTCGCCACGAATTG+GGG + chr5.2:83991631-83991650 None:intergenic 45.0%
GCGTTTGATCTCTCTGTCTT+TGG + chr5.2:83987002-83987021 None:intergenic 45.0%
GGGTACAGAGAAATGTCTCT+AGG - chr5.2:83990086-83990105 MS.gene65386:intron 45.0%
GTATCCGTATAAACGAGCGA+TGG - chr5.2:83991670-83991689 MS.gene65386:CDS 45.0%
TACACCAGTAAAGGGAGCAA+AGG + chr5.2:83987554-83987573 None:intergenic 45.0%
TATAGAGCTTCGGTACGCTT+CGG + chr5.2:83992269-83992288 None:intergenic 45.0%
TATGGTGGTATCAGCAAGGT+TGG - chr5.2:83987262-83987281 MS.gene65386:intron 45.0%
TCAGAAGAATTCGGTACGCA+TGG + chr5.2:83992295-83992314 None:intergenic 45.0%
TCCCTCATCCACAAAACCTT+TGG + chr5.2:83989129-83989148 None:intergenic 45.0%
TCCCTTAGGTCTCTCTGATA+GGG - chr5.2:83989881-83989900 MS.gene65386:intron 45.0%
TCCTAAGACCGCAAGCTATT+TGG + chr5.2:83988957-83988976 None:intergenic 45.0%
TGATCAGTGGTTATGGAGAG+TGG + chr5.2:83987688-83987707 None:intergenic 45.0%
TGCCATTAATGGCACCAAAG+TGG + chr5.2:83990726-83990745 None:intergenic 45.0%
TTACCCTTTGCTCCCTTTAC+TGG - chr5.2:83987547-83987566 MS.gene65386:intron 45.0%
! AAGGGAGAACTGTGAGTTGA+GGG - chr5.2:83991699-83991718 MS.gene65386:CDS 45.0%
! ACCAAATAGCTTGCGGTCTT+AGG - chr5.2:83988953-83988972 MS.gene65386:intron 45.0%
! AGAGAACAGGTTGACCATGA+TGG + chr5.2:83987579-83987598 None:intergenic 45.0%
! ATGCGTTTTCTTCCCAACGT+GGG - chr5.2:83990958-83990977 MS.gene65386:CDS 45.0%
! CTTGGGAGAGCATATGAATG+AGG - chr5.2:83988803-83988822 MS.gene65386:intron 45.0%
! GCACTCATCAAAGAGTATGG+TGG - chr5.2:83987247-83987266 MS.gene65386:intron 45.0%
! GCCCAGAAAACATTGGTGAT+GGG + chr5.2:83987445-83987464 None:intergenic 45.0%
! TCTCTAGGTGCTTTTGCTCT+GGG - chr5.2:83990101-83990120 MS.gene65386:intron 45.0%
! TGAGTTGGCAAGTTCGTTAG+AGG - chr5.2:83989938-83989957 MS.gene65386:intron 45.0%
!! ATGGAATTGGATGGTGCCAT+TGG + chr5.2:83990749-83990768 None:intergenic 45.0%
!! GTCCAAAGGTTTTGTGGATG+AGG - chr5.2:83989124-83989143 MS.gene65386:intron 45.0%
!! TCAAGGTGATCTTGATGACG+AGG - chr5.2:83987414-83987433 MS.gene65386:intron 45.0%
!!! CACACCCTTTTTAGCTCTCA+AGG - chr5.2:83989210-83989229 MS.gene65386:intron 45.0%
!!! CTTTTGCTCTGGGATTACAG+GGG - chr5.2:83990111-83990130 MS.gene65386:intron 45.0%
!!! GCTTTTGCTCTGGGATTACA+GGG - chr5.2:83990110-83990129 MS.gene65386:intron 45.0%
!!! TGCTTTTGCTCTGGGATTAC+AGG - chr5.2:83990109-83990128 MS.gene65386:intron 45.0%
!!! AATATCATAAATTTAAAATA+TGG + chr5.2:83992660-83992679 None:intergenic 5.0%
AAACGAGCGATGGAGAGTGA+AGG - chr5.2:83991680-83991699 MS.gene65386:CDS 50.0%
AAATTTGCCGGTGGGAACGA+AGG + chr5.2:83987159-83987178 None:intergenic 50.0%
AACGAGCGATGGAGAGTGAA+GGG - chr5.2:83991681-83991700 MS.gene65386:CDS 50.0%
AACTCCCATCAGCAATGGGA+AGG - chr5.2:83988716-83988735 MS.gene65386:intron 50.0%
ACGAAGGCAGTGAACCTGAT+CGG + chr5.2:83987143-83987162 None:intergenic 50.0%
AGAAACGGTGACGAGTGTCT+GGG + chr5.2:83987747-83987766 None:intergenic 50.0%
AGCTGCAAAAAGAGTTGCGC+AGG - chr5.2:83988674-83988693 MS.gene65386:intron 50.0%
AGTTGCGCAGGTAATGCGAA+AGG - chr5.2:83988686-83988705 MS.gene65386:intron 50.0%
CAACCCTTGTGACTGTTCGT+GGG + chr5.2:83987024-83987043 None:intergenic 50.0%
CACTCGATTCCAAGAGGAGT+TGG - chr5.2:83988233-83988252 MS.gene65386:intron 50.0%
CACTTTACAGGCTGCTGGTA+TGG - chr5.2:83987204-83987223 MS.gene65386:intron 50.0%
CAGATCCAGAAATTTGCCGG+TGG + chr5.2:83987168-83987187 None:intergenic 50.0%
CCAACGTGGGATCAGTTTCA+AGG - chr5.2:83990971-83990990 MS.gene65386:CDS 50.0%
CCATCAGCAATGGGAAGGTT+AGG - chr5.2:83988721-83988740 MS.gene65386:intron 50.0%
CCGCAAATTTCGCCACGAAT+TGG + chr5.2:83991633-83991652 None:intergenic 50.0%
CCTAACCTTCCCATTGCTGA+TGG + chr5.2:83988724-83988743 None:intergenic 50.0%
CCTTGAAACTGATCCCACGT+TGG + chr5.2:83990974-83990993 None:intergenic 50.0%
CGGCTTCAAAGTTTGGGAAC+TGG + chr5.2:83987822-83987841 None:intergenic 50.0%
GAAACACATGTGGCAGAGAG+TGG - chr5.2:83989970-83989989 MS.gene65386:intron 50.0%
GAAACCAACACGACGAGCAT+AGG + chr5.2:83986873-83986892 None:intergenic 50.0%
GAAGAATTCGGTACGCATGG+GGG + chr5.2:83992292-83992311 None:intergenic 50.0%
GAAGCCAGATACGATCCACT+TGG + chr5.2:83987089-83987108 None:intergenic 50.0%
GAAGGGAGAACTGTGAGTTG+AGG - chr5.2:83991698-83991717 MS.gene65386:CDS 50.0%
GACCCTATCAGAGAGACCTA+AGG + chr5.2:83989886-83989905 None:intergenic 50.0%
GATCTCTGCTATGGCACCAA+TGG - chr5.2:83990842-83990861 MS.gene65386:intron 50.0%
GCATCCAAAGCTGAGGATGA+TGG - chr5.2:83988276-83988295 MS.gene65386:intron 50.0%
GCTATCACTTCGCTGAGTGA+TGG + chr5.2:83988016-83988035 None:intergenic 50.0%
GCTCTCAAGGTAAGGCTAGT+TGG - chr5.2:83989223-83989242 MS.gene65386:intron 50.0%
GGAGAACTCCCATCAGCAAT+GGG - chr5.2:83988712-83988731 MS.gene65386:intron 50.0%
GGCTGTCAGGATGAAAGCTT+GGG - chr5.2:83988786-83988805 MS.gene65386:intron 50.0%
GGTTGGCACGCTAACATTCA+TGG - chr5.2:83988254-83988273 MS.gene65386:intron 50.0%
GTGTGTGTGATGTGTGTGTG+TGG + chr5.2:83990777-83990796 None:intergenic 50.0%
TACCTAACGCACCAAAGACG+AGG - chr5.2:83991137-83991156 MS.gene65386:CDS 50.0%
TCAGTGGTTATGGAGAGTGG+GGG + chr5.2:83987685-83987704 None:intergenic 50.0%
TCTGAATGATAGCTCCGTCG+CGG + chr5.2:83986928-83986947 None:intergenic 50.0%
TCTGCCAAGTGGATCGTATC+TGG - chr5.2:83987082-83987101 MS.gene65386:intron 50.0%
TGCACGATTCTTCTGCCAAG+TGG - chr5.2:83987071-83987090 MS.gene65386:intron 50.0%
TGGCCACACATCAAGTCCAA+AGG - chr5.2:83989110-83989129 MS.gene65386:intron 50.0%
TGGCTGTCAGGATGAAAGCT+TGG - chr5.2:83988785-83988804 MS.gene65386:intron 50.0%
TGTGTGATGTGTGTGTGTGG+TGG + chr5.2:83990774-83990793 None:intergenic 50.0%
TTCGCGGTACTTTCGCGTAT+TGG - chr5.2:83991601-83991620 MS.gene65386:CDS 50.0%
TTGACTAGCGAACCGCGAAT+TGG - chr5.2:83991564-83991583 MS.gene65386:CDS 50.0%
! AACCTCGTCTTTGGTGCGTT+AGG + chr5.2:83991142-83991161 None:intergenic 50.0%
! ATGTGTGTGTGTGGTGGAGA+TGG + chr5.2:83990768-83990787 None:intergenic 50.0%
! CGATTCCAAGAGGAGTTGGT+TGG - chr5.2:83988237-83988256 MS.gene65386:intron 50.0%
! GATGCGTTTTCTTCCCAACG+TGG - chr5.2:83990957-83990976 MS.gene65386:CDS 50.0%
! GTCTCTAGGTGCTTTTGCTC+TGG - chr5.2:83990100-83990119 MS.gene65386:intron 50.0%
! GTGGTGGAGATGGAATTGGA+TGG + chr5.2:83990758-83990777 None:intergenic 50.0%
! GTGTGTGGTGGAGATGGAAT+TGG + chr5.2:83990762-83990781 None:intergenic 50.0%
! TCGTCTTTGGTGCGTTAGGT+AGG + chr5.2:83991138-83991157 None:intergenic 50.0%
!! CAGCAAGGTTGGCTTTACTG+AGG - chr5.2:83987273-83987292 MS.gene65386:intron 50.0%
!! GGTGCCATTAATGGCACCAA+TGG - chr5.2:83990730-83990749 MS.gene65386:intron 50.0%
!! GGTGCCATTGGTGCCATTAA+TGG + chr5.2:83990737-83990756 None:intergenic 50.0%
!! TACGCGAAAGTACCGCGAAT+CGG + chr5.2:83991600-83991619 None:intergenic 50.0%
!! TATTGGTTCCCCCCAATTCG+TGG - chr5.2:83991618-83991637 MS.gene65386:CDS 50.0%
AACGCCCACGAACAGTCACA+AGG - chr5.2:83987017-83987036 MS.gene65386:intron 55.0%
AACGGCCAGGATCTCTGCTA+TGG - chr5.2:83990833-83990852 MS.gene65386:intron 55.0%
ACACATGTGGCAGAGAGTGG+TGG - chr5.2:83989973-83989992 MS.gene65386:intron 55.0%
ACATGGCTTACCGCCATGTC+TGG - chr5.2:83987655-83987674 MS.gene65386:intron 55.0%
ACATTCCGCTTGCAGGCACT+GGG - chr5.2:83987951-83987970 MS.gene65386:intron 55.0%
ACGCCCACGAACAGTCACAA+GGG - chr5.2:83987018-83987037 MS.gene65386:intron 55.0%
ATCACACACACATCCCCACG+CGG - chr5.2:83990797-83990816 MS.gene65386:intron 55.0%
ATCCTGGCCGTTGATGTGTG+TGG + chr5.2:83990825-83990844 None:intergenic 55.0%
ATTCGTCCTGGTACGCGGTA+CGG + chr5.2:83992335-83992354 None:intergenic 55.0%
ATTGAGGACCCCATCTCCGA+TGG - chr5.2:83988173-83988192 MS.gene65386:intron 55.0%
CACATGTGGCAGAGAGTGGT+GGG - chr5.2:83989974-83989993 MS.gene65386:intron 55.0%
CAGAAACGGTGACGAGTGTC+TGG + chr5.2:83987748-83987767 None:intergenic 55.0%
CAGTGGTTATGGAGAGTGGG+GGG + chr5.2:83987684-83987703 None:intergenic 55.0%
CCAACCCTTGTGACTGTTCG+TGG + chr5.2:83987025-83987044 None:intergenic 55.0%
CCACGAACAGTCACAAGGGT+TGG - chr5.2:83987022-83987041 MS.gene65386:intron 55.0%
CGAAGGCAGTGAACCTGATC+GGG + chr5.2:83987142-83987161 None:intergenic 55.0%
CGAGTCTGAAGAGGCTGCTA+AGG - chr5.2:83986835-83986854 MS.gene65386:CDS 55.0%
CGCAGGTAATGCGAAAGGAG+GGG - chr5.2:83988691-83988710 MS.gene65386:intron 55.0%
CGTTCCCACCGGCAAATTTC+TGG - chr5.2:83987160-83987179 MS.gene65386:intron 55.0%
CTCCCCATCATCCTCAGCTT+TGG + chr5.2:83988283-83988302 None:intergenic 55.0%
CTCGTCACCGTTTCTGCAAG+TGG - chr5.2:83987752-83987771 MS.gene65386:intron 55.0%
CTTGCCTCTCCATCGGAGAT+GGG + chr5.2:83988185-83988204 None:intergenic 55.0%
CTTGGTCAGGGGAGAGTGAT+AGG + chr5.2:83990209-83990228 None:intergenic 55.0%
GCGCAGGTAATGCGAAAGGA+GGG - chr5.2:83988690-83988709 MS.gene65386:intron 55.0%
GGAGATGGGGTCCTCAATAC+TGG + chr5.2:83988171-83988190 None:intergenic 55.0%
GGGAGAACTCCCATCAGCAA+TGG - chr5.2:83988711-83988730 MS.gene65386:intron 55.0%
GGGGTCAGCCCAGAAAACAT+TGG + chr5.2:83987452-83987471 None:intergenic 55.0%
TACATTCCGCTTGCAGGCAC+TGG - chr5.2:83987950-83987969 MS.gene65386:intron 55.0%
TCACGATTCGTCCTGGTACG+CGG + chr5.2:83992340-83992359 None:intergenic 55.0%
TCCTGGCCGTTGATGTGTGT+GGG + chr5.2:83990824-83990843 None:intergenic 55.0%
TCGGATGCTTGCCTCTCCAT+CGG + chr5.2:83988192-83988211 None:intergenic 55.0%
TGCGCAGGTAATGCGAAAGG+AGG - chr5.2:83988689-83988708 MS.gene65386:intron 55.0%
TGGTGCGTTAGGTAGGTGTG+TGG + chr5.2:83991131-83991150 None:intergenic 55.0%
TTCACTGCCTTCGTTCCCAC+CGG - chr5.2:83987149-83987168 MS.gene65386:intron 55.0%
TTGCCTCTCCATCGGAGATG+GGG + chr5.2:83988184-83988203 None:intergenic 55.0%
! CGAACTTGTTCCACCCGATC+AGG - chr5.2:83987126-83987145 MS.gene65386:intron 55.0%
! CGCATGGGGGTATAGAGCTT+CGG + chr5.2:83992279-83992298 None:intergenic 55.0%
! TCGGTACGCTTCGGTTCGTA+GGG + chr5.2:83992260-83992279 None:intergenic 55.0%
! TGTTTTCTGGGCTGACCCCA+AGG - chr5.2:83987453-83987472 MS.gene65386:intron 55.0%
! TTCGGTACGCTTCGGTTCGT+AGG + chr5.2:83992261-83992280 None:intergenic 55.0%
!! CAAAGCTGAGGATGATGGGG+AGG - chr5.2:83988281-83988300 MS.gene65386:intron 55.0%
!! TGGTAGCGGCTGTTAGGATG+AGG - chr5.2:83991792-83991811 MS.gene65386:CDS 55.0%
!! TGGTGCCATAGCAGAGATCC+TGG + chr5.2:83990841-83990860 None:intergenic 55.0%
!! TTTGGCTGGTAGCGGCTGTT+AGG - chr5.2:83991786-83991805 MS.gene65386:CDS 55.0%
ACCCACACACATCAACGGCC+AGG - chr5.2:83990820-83990839 MS.gene65386:intron 60.0%
AGGCAGTGAACCTGATCGGG+TGG + chr5.2:83987139-83987158 None:intergenic 60.0%
AGGTACCCAGTGCCTGCAAG+CGG + chr5.2:83987959-83987978 None:intergenic 60.0%
CGCGGACCCACACACATCAA+CGG - chr5.2:83990815-83990834 MS.gene65386:intron 60.0%
GCGTGCCAACCAACTCCTCT+TGG + chr5.2:83988245-83988264 None:intergenic 60.0%
GCTTGCCTCTCCATCGGAGA+TGG + chr5.2:83988186-83988205 None:intergenic 60.0%
TGATGTGTGTGGGTCCGCGT+GGG + chr5.2:83990814-83990833 None:intergenic 60.0%
TTCGTCCTGGTACGCGGTAC+GGG + chr5.2:83992334-83992353 None:intergenic 60.0%
TTGATGTGTGTGGGTCCGCG+TGG + chr5.2:83990815-83990834 None:intergenic 60.0%
!! GAACCGCGAATTGGTTCGCG+CGG - chr5.2:83991573-83991592 MS.gene65386:CDS 60.0%
GATGTGTGTGGGTCCGCGTG+GGG + chr5.2:83990813-83990832 None:intergenic 65.0%
GGACCCCATCTCCGATGGAG+AGG - chr5.2:83988178-83988197 MS.gene65386:intron 65.0%
GGTCCGCGCGAACCAATTCG+CGG + chr5.2:83991579-83991598 None:intergenic 65.0%
TCTCGTCGTTCTCGCCGCGA+CGG - chr5.2:83986911-83986930 MS.gene65386:CDS 65.0%
TCTGGGCTGACCCCAAGGCA+AGG - chr5.2:83987458-83987477 MS.gene65386:intron 65.0%
TGGTACGCGGTACGGGTTCG+CGG + chr5.2:83992327-83992346 None:intergenic 65.0%
!! GTGGCAGAGAGTGGTGGGTG+AGG - chr5.2:83989979-83989998 MS.gene65386:intron 65.0%
GCGAACCCGTACCGCGTACC+AGG - chr5.2:83992326-83992345 MS.gene65386:CDS 70.0%
!! GAGTGGGGGGCGTCCAGACA+TGG + chr5.2:83987671-83987690 None:intergenic 70.0%
!! GGTTCGCGCGGACCGATTCG+CGG - chr5.2:83991585-83991604 MS.gene65386:CDS 70.0%
!! TGGGGGGCGTCCAGACATGG+CGG + chr5.2:83987668-83987687 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr5.2 gene 83986827 83992909 83986827 ID=MS.gene65386
chr5.2 mRNA 83986827 83992909 83986827 ID=MS.gene65386.t1;Parent=MS.gene65386
chr5.2 exon 83990912 83992909 83990912 ID=MS.gene65386.t1.exon1;Parent=MS.gene65386.t1
chr5.2 CDS 83990912 83992909 83990912 ID=cds.MS.gene65386.t1;Parent=MS.gene65386.t1
chr5.2 exon 83986827 83987000 83986827 ID=MS.gene65386.t1.exon2;Parent=MS.gene65386.t1
chr5.2 CDS 83986827 83987000 83986827 ID=cds.MS.gene65386.t1;Parent=MS.gene65386.t1
Gene Sequence

>MS.gene65386

ATGGAATTCGAGTCTGAAGAGGCTGCTAAGGCTTTCTATAATTCCTATGCTCGTCGTGTTGGTTTCAGTACTCGAGTCAGTTCTTCTCGTCGTTCTCGCCGCGACGGAGCTATCATTCAGAGACAATTCGTTTGTGCTAAGGAAGGGTTTCGCAATTTGAACGAGAAACGTACCAAAGACAGAGAGATCAAACGCCCACGAACAGTCACAAGGGTTGGATGCAAAGCCTCTTTATCTGTCAAAATGCACGATTCTTCTGCCAAGTGGATCGTATCTGGCTTCGTCAGAGAACACAATCACGAACTTGTTCCACCCGATCAGGTTCACTGCCTTCGTTCCCACCGGCAAATTTCTGGATCTGCAAAAACCCTAATTGACACTTTACAGGCTGCTGGTATGGGTCCTCGCAGAATTATGTCTGCACTCATCAAAGAGTATGGTGGTATCAGCAAGGTTGGCTTTACTGAGGTTGATTGTAGGAATTACATGAGGAATAATCGCCATAAAAGTTTACAAGGCGACATTCAACTTGTTCTTGATTATTTGAGACAAATGCATGCCCAAAATCCTAATTTCTTCTTTGCTGTTCAAGGTGATCTTGATGACGAGGATCATCCCATCACCAATGTTTTCTGGGCTGACCCCAAGGCAAGGTTGAATTACACTTTTTTCGGAGATACTGTCACTTTTGACACTACTTACCGCTCTAACAGGTATCGATTACCCTTTGCTCCCTTTACTGGTGTAAACCATCATGGTCAACCTGTTCTCTTTGGTTGTGCTTTTCTAATTAATGAAACTGAAGCTTCCTTTGTCTGGCTTTTCAACACATGGCTTACCGCCATGTCTGGACGCCCCCCACTCTCCATAACCACTGATCACGATTCTGTCATTCAGTCCGCTATAATGCAAGTATTCCCAGACACTCGTCACCGTTTCTGCAAGTGGCATATCTTTAAGCAATGCCAGGAGAAGTTGTCTCACATTTTCCTCCAGTTCCCAAACTTTGAAGCCGAGTTTCACAAATGTGTTAACTTGACTGACTCAATTGACGAATTTGAGTCTTGCTGGTCCACACTTTTAGACAGATATGATCTCAGGGACAATGAATGGCTTCAAGCAATACATTCCGCTTGCAGGCACTGGGTACCTGTATATTTGCGAGACACATTCTTTGCAGAGATGTCCATCACTCAGCGAAGTGATAGCATGAACTCTTACTTTGATGGCTATGTGAATGCTTCAACCAGTTTAAATCAGTTCTTTAAGCTTTATGAGAAAACGCTTGAAAGTCGCAATGAGAAAGAAGTAAGAGCGGATTATGACACAATGAATACTTTGCCAGTATTGAGGACCCCATCTCCGATGGAGAGGCAAGCATCCGAGCTTTACACAAGAAAAATTTTCACTCGATTCCAAGAGGAGTTGGTTGGCACGCTAACATTCATGGCATCCAAAGCTGAGGATGATGGGGAGGTCATTACATATCATGTAGCTAAATTTGGAGAGGATCATAAAGCATACAATGTTAGATTCAATGTTTTAGAGATGAAAGCGACTTGCAGTTGCCAAATGTTTGAGTTTTCAGGCCTTCTTTGCAGACATATTCTGGCAGTATTTAGAGTTACCAATGTCCTTACTCTTCCATCTCATTATATACTCAAACGCTGGACAAAAAATGCCAAAAGCAACGTCAGTTTGCAAGAACATTCTTCTCATGTATATACTTACTATTTGGAATCTCATACAGTTAGATATAATACTCTCCGACATGAAGCCTTTAAATTTGTTGATAAAGGTGCAAGCTCCCCTGAAACTTATGATGTTGCAAAGGATGCTTTACAAGAAGCTGCAAAAAGAGTTGCGCAGGTAATGCGAAAGGAGGGGAGAACTCCCATCAGCAATGGGAAGGTTAGGAGTCACTTGCTGAATGATGAAAATCATGCTAATTACACTAGTGGCTGTCAGGATGAAAGCTTGGGAGAGCATATGAATGAGGTCAGAATTCCATTTTACGGTTGTTTTTAACCTGTTCTACGATGGCATGTTATATGTATTTTAAATGTATTTTACTCCTTAATCCACCATGCTAGAGAATAGAGATATAAAACTAACATTGAATCTTCACCAAATAGCTTGCGGTCTTAGGATAATTGAATCTTGAAATGATATTAGAGCCTCTATGATAAAGTGGTTAGCAGTTTGATACTTGTCAGTTGTCACCACCATCATTCTTCCAATAAAGTTGAATTTCAGTGCACAAGGTAGTTTTGACTTGTGTGTTGGCCACACATCAAGTCCAAAGGTTTTGTGGATGAGGGAATGTGCTAGAGATATAAAATCAATCTTTACTTTCAGTTGTACAGCTTAGGTTATTCAGCGACACACCCTTTTTAGCTCTCAAGGTAAGGCTAGTTGGCAATTGCTTCTCAATCTTAACCCTTTGACCTTCATTTTTGTTGAGTGCTATTGCATATGTTCTCTATATATTATAAGTCCTACTAATATATAATCATCATATGCTTTTGTGTCCTTCTACATGTCTATGGTTTTAATACTAAAATCTTCCAACCATTTTGAGTTATGAGTCTTGTGACTCAAAAGTATCTGCATGTTTGTTCAATTTGAGTAATACCTATGAAACACTCATTCAACACTTATTTATGCAATTTATAGTCTAAAACCCAATTGAGAAGCTAGTTACTCATTTTATTTGTACATATTCAGGGGAAGTTAAAGTAAACACGTAAGATATGTTTTTTTACATTATTTGTACGCATTTTATTTGCTCCAAATATTGATTTTGATACAATTTTTGTTGTAAAAAATTTTTTTTTACATCAATTGGCTTGAAGTACACATCAATTTGGAAGAAAATTTAATCCTCTGAAGATCGAACTTATCATCAATTAGGACTTAATTTACTTATTATTTTAAGTCATCTTTTAAGAACCAAATTGGTAGTGCACTGAGATTTTTAGAGAATAAAGTAACATCTTGATTTCATTGATTGAACAAAGTTGGCCTTTTGAAAGATAAATTCCTTATCCATTATCCCTTAGGTCTCTCTGATAGGGTCCATAAAGAGAATAGCCCAATGGATAGTAGAGGTGAGTTGGCAAGTTCGTTAGAGGGAAAAATGGGAAACACATGTGGCAGAGAGTGGTGGGTGAGGTGTGTGATCTATTTTGTTATAAGAAAATGTGCAATTCCAGATGGAGTTATCTTAGATCATTATTCAGTTAGAACCTTAATGTTTGGGTACAGAGAAATGTCTCTAGGTGCTTTTGCTCTGGGATTACAGGGGTTAATCTTCTGTAATGTAATATTTTCTTTTTCAATCAATAATACTAGTTTTATGTTCTCCGTTAACTCGGTTCCTATCACTCTCCCCTGACCAAGAACTTCACATTTTGATGTTTTAATCGTTACTTTACATAGATACATTACATGTGAATAAATTTAGTCATTAGTTTTCTTTTTTCTCTTAGGAATTTGTATTTCGTCAGTCTTGTTACTGCATTCAGTTGTCTGATGTTCGTTGTTTTCACCCAAATTAGAATTATATGGTTTTGAATTAATTAAGGATGCATACTGTGTTGGGTTTAGTTTTCATTTGCAATGTTTTTCCCTTAGGGCATAAAGAAAAATATTTGCATCATATATCATCTCAACATTTTATGATTCTGTTTTCATTAAAGCATTCTTTGAACACATTTTGTGTTTTAATATTGGGTTTTAAGCAATTAATGTTGACTGAATTGACTTGTAGATGTGGTATGTTGTGGATTTTGGTATTATCAACTAAGTTATGTTTACTGCATTGTAAGCACAAATGCACAAAATTTTGGTGGCAACAATTCAGTGTGATATGGAGACAAGAAAAAACAGGGGTTCCACTTTGGTGCCATTAATGGCACCAATGGCACCATCCAATTCCATCTCCACCACACACACACATCACACACACATCACACACACATCCCCACGCGGACCCACACACATCAACGGCCAGGATCTCTGCTATGGCACCAATGGCACCATTTCTAAGTCACTGAAGTATTTCCCAAAAAACAGCAGTGTCAAATGCTATAAACCAAAAACATCATTAACAACATTAATCATTAATCGATGCGTTTTCTTCCCAACGTGGGATCAGTTTCAAGGATCAAACAACGCATAATGTCTTGTTATAAATCACATTTAAAGAGAGACAATTTGACTCCAAACCTCTTTTAATAGTTTGGCTTGAAGTTTTATTTGGACTATCCTCAATCTGATTTATTTTCTTACTGGGCTTTCCACACACCTACCTAACGCACCAAAGACGAGGTTCTACATTCTTTTCTACTAGGAACTATCCCTATTTTTTTTTTTCTTCTAATGATTTTATTTCTAATCCTATATTGTCTTGCATAACCACTCATCTATCATAATATTCTTAGCTTTGAAACTGTTATAAATCCAAAATATCATTTAAAAGTAATGTGAACTAATATTTGGAATACGAATTTGTACTTGATTTAGCCGAAGCATACATTTGTAAAATGACATGAAGATTTACTTAAACATCTACTTTTCTTGCTTTACTGAAGCTGGATTTAGTATTGTTTAAGTACTCTATGATACCTTTATAGAGTTATTCTTTCCATCATCATCATGATGTGCTTAATTGTATATTAATTTAATACCCATTGATTGGATATTGTCTGACACATAGTAACATAATTCGCTGGGTTGACTAGCGAACCGCGAATTGGTTCGCGCGGACCGATTCGCGGTACTTTCGCGTATTGGTTCCCCCCAATTCGTGGCGAAATTTGCGGAAACAAGCGAACCGTGAGTATCCGTATAAACGAGCGATGGAGAGTGAAGGGAGAACTGTGAGTTGAGGGCGTTGTAGCATGAGAGTGAGAAGAACATGAGAAGAGAGTGGAGAGTGAAGAAACAGAAACTGGATTTGGCTGGTAGCGGCTGTTAGGATGAGGAAGATGATGAAATTAGGGTTAGTGTAAATTGGGCTTATCTGGGCCATTTTTTTTTTTTTTTATATTGGACTTTGCTAAATTTGACCCAATGCTGAATTGCTAAACATAATGTAATAAGTGTCGCCTAGTGAATTTTTTTAAAACGTAAACTCTCTTTTTTTTTTAACTAAAATACTTTTTCTTTTTTGTATCAAAACTATATATACTCCCAAAATAGTTTTATTGGTATATTAATAAAAAAATATTATTACTCATTATAAATTAATTTATTTAAATGTAAAAATGTTGAGTATTTGAACGGAAATAGTGTTTTTTTTTTTTGTTACAACGGAAATAGTGTTAGTACTAATAAATTTTAAGTTTTGTTTAAAAATTCTATTAAAAAAATACTCTTAGTTAAAACTTTATTGATAGCTTATTATATTTAACTAGGTATTATTAGCCCTACGAACCGAAGCGTACCGAAGCTCTATACCCCCATGCGTACCGAATTCTTCTGATGTAGCGTGCCGCGAACCCGTACCGCGTACCAGGACGAATCGTGAATTATGTGACTATGGTCTGATAGTTGTTGGAACAGAAGCATGTGATATTAGTGTTCTTTGTGAATTGCAATTAGCCAAAAAGCGCTTTCACAAATATATTTTGTTCTTACGTGCATTTGGTTGAGGAATGTTGAATAATAATGATATGGAAAGAGAGGGAACAACCTTCTAATATATTCTGCGTGTCTTTCATTTTTCTATTTTAGTAGATTTGTTATTCTCCCCATGTGCTTTCTCTCATTTCTTTCAAATGCTGTTTTCTTGAATTTTCTTTTGTCTAATAGATTATATCGGATACCATATTTTAAATTTATGATATTTCATACTCAAATATGCTTTTGTTTATCTGAATTACTTAATATCTAATATCTTGCAGGATGATATGGATAAGCATATCACGAAACTTACGGATGAGCTTGAGTGTGCAAATAGGAAATGTGAAATGTACCGGTCTAACTTGCTCTCTGTTTTGAAAGCTGTTGAGGATCACAAGTTAGAGTTGTCAGTAAAGGTGGAAAACATTAAGATAAGCATGAAAGACGGCCTCTGA
Protein sequence

>MS.gene65386.t1

MEFESEEAAKAFYNSYARRVGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNLNEKRTKDREIKRPRTVTRVGCKASLSVKMHDSSAKWIVSGFVREHNHELVPPDQVHCLRSHRQISGSAKTLIDTLQAAGMGPRRIMSALIKEYGGISKVGFTEVDCRNYMRNNRHKSLQGDIQLVLDYLRQMHAQNPNFFFAVQGDLDDEDHPITNVFWADPKARLNYTFFGDTVTFDTTYRSNRYRLPFAPFTGVNHHGQPVLFGCAFLINETEASFVWLFNTWLTAMSGRPPLSITTDHDSVIQSAIMQVFPDTRHRFCKWHIFKQCQEKLSHIFLQFPNFEAEFHKCVNLTDSIDEFESCWSTLLDRYDLRDNEWLQAIHSACRHWVPVYLRDTFFAEMSITQRSDSMNSYFDGYVNASTSLNQFFKLYEKTLESRNEKEVRADYDTMNTLPVLRTPSPMERQASELYTRKIFTRFQEELVGTLTFMASKAEDDGEVITYHVAKFGEDHKAYNVRFNVLEMKATCSCQMFEFSGLLCRHILAVFRVTNVLTLPSHYILKRWTKNAKSNVSLQEHSSHVYTYYLESHTVRYNTLRHEAFKFVDKGASSPETYDVAKDALQEAAKRVAQVMRKEGRTPISNGKVRSHLLNDENHANYTSGCQDESLGEHMNEDDMDKHITKLTDELECANRKCEMYRSNLLSVLKAVEDHKLELSVKVENIKISMKDGL