AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene65704

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene65704.t1 MTR_5g057990 97.732 926 21 0 1 926 1 926 0.0 1873
MS.gene65704.t1 MTR_1g110980 80.155 902 173 3 26 926 28 924 0.0 1536
MS.gene65704.t1 MTR_1g111000 75.825 939 212 5 1 926 1 937 0.0 1485
MS.gene65704.t1 MTR_3g096870 29.167 720 385 20 188 859 217 859 1.56e-81 283
MS.gene65704.t1 MTR_5g026610 30.078 645 377 15 178 816 81 657 7.44e-75 264
MS.gene65704.t1 MTR_5g026610 30.200 649 371 18 178 816 144 720 1.18e-74 265
MS.gene65704.t1 MTR_5g026610 30.200 649 371 18 178 816 81 657 1.55e-74 265
MS.gene65704.t1 MTR_5g026610 30.200 649 371 18 178 816 144 720 2.32e-74 265
MS.gene65704.t1 MTR_5g026610 30.200 649 371 18 178 816 184 760 7.55e-74 264
MS.gene65704.t1 MTR_5g026610 31.535 482 264 12 339 816 2 421 1.95e-58 214
MS.gene65704.t1 MTR_6g014900 64.706 51 18 0 639 689 82 132 1.84e-15 74.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene65704.t1 AT1G68560 74.917 901 215 4 27 926 23 913 0.0 1440
MS.gene65704.t1 AT3G45940 64.744 919 252 9 11 926 4 853 0.0 1224
MS.gene65704.t1 AT5G11720 45.200 927 456 15 15 925 11 901 0.0 810
MS.gene65704.t1 AT5G63840 29.239 749 421 18 148 859 189 865 1.76e-85 294
MS.gene65704.t1 AT5G63840 29.239 749 421 18 148 859 216 892 2.07e-85 295
MS.gene65704.t1 AT3G23640 34.168 559 278 17 271 818 169 648 4.64e-83 289
MS.gene65704.t1 AT3G23640 34.168 559 278 17 271 818 169 648 4.64e-83 289
MS.gene65704.t1 AT3G23640 34.168 559 278 17 271 818 238 717 5.55e-83 290

Find 243 sgRNAs with CRISPR-Local

Find 387 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACATGTGCTTCGTAGTTTA+AGG 0.126958 5.2:-48986887 None:intergenic
TATTGATTCTATTTCTGTTT+TGG 0.157975 5.2:+48987437 MS.gene65704:CDS
CCTAAAGATGCTTCTTTATA+TGG 0.159072 5.2:+48983309 MS.gene65704:CDS
CTTTGCAATGACATGGAAAA+TGG 0.161209 5.2:+48987638 MS.gene65704:CDS
AATCTTAATGCTGATTTATA+TGG 0.165923 5.2:+48983417 MS.gene65704:CDS
CCGTTTCCAAGCTTCATTTC+TGG 0.183467 5.2:-48987312 None:intergenic
AAGGAACATGGGAGAATTTA+AGG 0.193751 5.2:+48986611 MS.gene65704:CDS
ACCCCTGATGGTGCCCTTAT+TGG 0.202977 5.2:+48982619 MS.gene65704:CDS
TTTGCATGATCTCTTGAAAA+TGG 0.216652 5.2:-48986763 None:intergenic
TCTTTGACTTATAAGGTTAT+TGG 0.219457 5.2:+48983546 MS.gene65704:CDS
AATATCAGGGCCATAGATTT+TGG 0.228691 5.2:-48982665 None:intergenic
ATGTTGAATTTCGGTATATT+TGG 0.235345 5.2:+48986649 MS.gene65704:CDS
AGGAACTTCTTTGACTTATA+AGG 0.239990 5.2:+48983539 MS.gene65704:CDS
TCAGTTGTATATAAAGTATA+AGG 0.253421 5.2:-48983381 None:intergenic
GACCAGCTGCTATGCCTTAC+TGG 0.265994 5.2:+48983646 MS.gene65704:CDS
GTCATTATTGACCCTGGAAT+TGG 0.270891 5.2:+48986013 MS.gene65704:CDS
CTAGAAATGCTTTAGGTATA+AGG 0.284843 5.2:+48986839 MS.gene65704:CDS
TTCAAGAAGTTTAGAAGCTT+TGG 0.286291 5.2:-48985959 None:intergenic
GAAGCTTCAAATTTCTGTTC+TGG 0.290500 5.2:+48986244 MS.gene65704:CDS
TTGAAAACAAGTGAACTAAA+TGG 0.291574 5.2:-48983255 None:intergenic
TCCTCAAACGCCAACAAAAT+TGG 0.295399 5.2:+48982565 MS.gene65704:CDS
AATGGTGGTGGTTGTTCTCT+TGG 0.296023 5.2:-48983072 None:intergenic
ATTCGGACATATAGTGTTCT+TGG 0.296071 5.2:-48986281 None:intergenic
GCTATGCCTTACTGGGCTTT+TGG 0.297185 5.2:+48983654 MS.gene65704:CDS
AGATGCTTCTTTATATGGTT+TGG 0.298662 5.2:+48983314 MS.gene65704:CDS
AACCTAAGAAGGGGAATATC+AGG 0.302044 5.2:-48982679 None:intergenic
TTCTTGGCTCAAGTGTGGCC+AGG 0.306836 5.2:+48986109 MS.gene65704:CDS
GTGGACCATGATAAAATAAA+AGG 0.308001 5.2:-48986541 None:intergenic
GTACGAAGGTGAACCTTTCT+TGG 0.313386 5.2:+48986093 MS.gene65704:CDS
TTTCCTAAGGTTTGTGGTAA+TGG 0.313549 5.2:-48983090 None:intergenic
TGGATCTCATCCTATGTATA+TGG 0.322901 5.2:+48983437 MS.gene65704:CDS
GATGCTTCTTTATATGGTTT+GGG 0.323794 5.2:+48983315 MS.gene65704:CDS
GTGGTTGTTCTCTTGGGATA+AGG 0.326394 5.2:-48983065 None:intergenic
GTTGGTACAGTTTACTTGAT+TGG 0.328413 5.2:+48987067 MS.gene65704:CDS
CTAGATGGAAAACCACTAAT+TGG 0.329562 5.2:+48987498 MS.gene65704:CDS
ACCCACCAAGATACCGTCTT+TGG 0.334922 5.2:-48986160 None:intergenic
CCTTACAAGATAAACGCTTC+TGG 0.335424 5.2:+48986373 MS.gene65704:CDS
GCCCTGATATTCCCCTTCTT+AGG 0.339169 5.2:+48982677 MS.gene65704:CDS
TTTGGACGAGGGTAGTTCTT+TGG 0.339509 5.2:-48985941 None:intergenic
AACAAGGAGGTGTGAAAGTT+TGG 0.339571 5.2:+48987370 MS.gene65704:CDS
GATCAATATACTACTTTGAT+TGG 0.341640 5.2:+48983621 MS.gene65704:CDS
CATGAACTCGTACCTGTTGA+TGG 0.343544 5.2:+48986202 MS.gene65704:CDS
ACCAGGATGGATATGTTGTT+TGG 0.344386 5.2:+48986312 MS.gene65704:CDS
TCATTATTGACCCTGGAATT+GGG 0.345196 5.2:+48986014 MS.gene65704:CDS
CCAGAAGCGTTTATCTTGTA+AGG 0.347793 5.2:-48986373 None:intergenic
ATGGTCCACTTATGTTGGTT+CGG 0.349305 5.2:+48986555 MS.gene65704:CDS
ATATCCACAATGTTGAATTT+CGG 0.352326 5.2:+48986640 MS.gene65704:CDS
GCAACTCACAAGGGTCTTCT+TGG 0.356281 5.2:+48986502 MS.gene65704:CDS
AACCAGAAAACCAAAATCTA+TGG 0.362540 5.2:+48982655 MS.gene65704:CDS
AGGATCGTCCCATCTTGTTT+TGG 0.363147 5.2:-48986350 None:intergenic
CATAGTTCTTCGGTTGGTTG+TGG 0.364369 5.2:-48986709 None:intergenic
TACTTCTGAACATGTGCATT+TGG 0.366445 5.2:+48987542 MS.gene65704:CDS
GTCTTTGGATTGAGAAAATC+AGG 0.367465 5.2:-48986145 None:intergenic
TATGATGCTCATAGTATCTA+TGG 0.368905 5.2:+48986463 MS.gene65704:CDS
CCATATAAAGAAGCATCTTT+AGG 0.369600 5.2:-48983309 None:intergenic
TTGTTGAAATCTCAAGATAT+TGG 0.372770 5.2:-48983281 None:intergenic
CTTGAGTTAACCCCAATTCC+AGG 0.372791 5.2:-48986025 None:intergenic
TGGTCCACTTATGTTGGTTC+GGG 0.375714 5.2:+48986556 MS.gene65704:CDS
TAAGTTGAAGGAGACCAATA+AGG 0.376052 5.2:-48982633 None:intergenic
ATTGAAGTCTCAGAGTATTC+AGG 0.384713 5.2:+48983129 MS.gene65704:CDS
GATATCCCCATCTGCATTGA+TGG 0.387246 5.2:-48985802 None:intergenic
GAATACTCTGAGACTTCAAT+AGG 0.388415 5.2:-48983126 None:intergenic
CCGAAGAACTATGCAATAGA+TGG 0.393300 5.2:+48986719 MS.gene65704:CDS
CTGTTATGTGTACTCTTAAA+CGG 0.393847 5.2:-48983008 None:intergenic
CCATCTATTGCATAGTTCTT+CGG 0.395072 5.2:-48986719 None:intergenic
ATGGTGGTGGTTGTTCTCTT+GGG 0.398455 5.2:-48983071 None:intergenic
CTCCTTCTGATGCGCCTGCC+GGG 0.400586 5.2:-48987251 None:intergenic
CACACTCATTGTAACATTCC+CGG 0.403974 5.2:+48987233 MS.gene65704:CDS
TAGTTTAAGGTGTAAAGATA+TGG 0.405653 5.2:-48986874 None:intergenic
TCTTGGCTCAAGTGTGGCCA+GGG 0.408740 5.2:+48986110 MS.gene65704:CDS
AGTTGAAGTTGAGTTGAAAA+GGG 0.409807 5.2:-48983223 None:intergenic
AAGTTGAAGTTGAGTTGAAA+AGG 0.411882 5.2:-48983224 None:intergenic
AAGGGTCTTCTTGGACTTGA+AGG 0.413047 5.2:+48986511 MS.gene65704:CDS
AAATTCCGCTCGATGTGATC+TGG 0.413564 5.2:+48985873 MS.gene65704:CDS
ACACCTGACAAGCCAATTAG+TGG 0.413630 5.2:-48987510 None:intergenic
TCTCCTTCTGATGCGCCTGC+CGG 0.414253 5.2:-48987252 None:intergenic
CAATCTGCTAGAAATGCTTT+AGG 0.418336 5.2:+48986832 MS.gene65704:CDS
TCAATCCAAAGACGGTATCT+TGG 0.419549 5.2:+48986155 MS.gene65704:CDS
AGGGTAGTTCTTTGGATTCA+AGG 0.420050 5.2:-48985933 None:intergenic
TGGAACTTTCCTAAGGTTTG+TGG 0.421087 5.2:-48983096 None:intergenic
ATTGGTAAAGCTCTTGTCTC+GGG 0.427587 5.2:-48986795 None:intergenic
AAGTTATGGTGTATACCAAC+GGG 0.427828 5.2:+48986045 MS.gene65704:CDS
TTCTTGGACTTGAAGGGAAA+AGG 0.429863 5.2:+48986518 MS.gene65704:CDS
ATCAATCCACCTTGCTGCAT+TGG 0.432382 5.2:-48987183 None:intergenic
GTGGCTTCACTTGAGCTAGA+TGG 0.432743 5.2:+48987483 MS.gene65704:CDS
CAGATGCAAACAAGCAAAGA+TGG 0.439003 5.2:+48983028 MS.gene65704:CDS
TATATGGATCTGAGAAATAA+TGG 0.439740 5.2:+48983453 MS.gene65704:CDS
AAGAAAAGTGGTCTTGCAAT+TGG 0.440362 5.2:-48986919 None:intergenic
TCTCTTGGGATAAGGTTGTA+TGG 0.443474 5.2:-48983057 None:intergenic
TTGACTTATAAGGTTATTGG+TGG 0.444386 5.2:+48983549 MS.gene65704:CDS
TTCGGACATATAGTGTTCTT+GGG 0.445889 5.2:-48986280 None:intergenic
AAACCACTAATTGGCTTGTC+AGG 0.446974 5.2:+48987507 MS.gene65704:CDS
GCAAGGTGGATTGATCTCTA+AGG 0.447708 5.2:+48987191 MS.gene65704:CDS
AGACCAATAAGGGCACCATC+AGG 0.448219 5.2:-48982622 None:intergenic
ATTGGGGTTAACTCAAGTTA+TGG 0.450159 5.2:+48986031 MS.gene65704:CDS
ACTCCAAGACACCGTTATAG+TGG 0.450821 5.2:-48986441 None:intergenic
TGAAAACAAGTGAACTAAAT+GGG 0.454745 5.2:-48983254 None:intergenic
ACTATATGTCCGAATGGAAC+AGG 0.457926 5.2:+48986289 MS.gene65704:CDS
AACTACGAAGCACATGTTAG+TGG 0.458451 5.2:+48986892 MS.gene65704:CDS
CATAGAAATGCTAAACTGTA+AGG 0.458722 5.2:-48982490 None:intergenic
ACCATCAGGGGTTTCTTCAA+TGG 0.458833 5.2:-48982608 None:intergenic
TTGGGATTGGATGGAAGTGT+TGG 0.460068 5.2:+48987456 MS.gene65704:CDS
TCAGGAAAGTTTACCGCCCC+TGG 0.460512 5.2:-48986127 None:intergenic
TTGCATGATCTCTTGAAAAT+GGG 0.465416 5.2:-48986762 None:intergenic
ATAGTTCTTCGGTTGGTTGT+GGG 0.467268 5.2:-48986708 None:intergenic
TCGTACCTGTTGATGGCCTA+TGG 0.468111 5.2:+48986209 MS.gene65704:CDS
CTGGAACGACGATGATCATA+TGG 0.474710 5.2:+48985892 MS.gene65704:CDS
CGTTGTTTCCTCCCGGTAGT+TGG 0.476352 5.2:+48987049 MS.gene65704:CDS
ACTCACACCATCACATCAAC+AGG 0.478651 5.2:+48987090 MS.gene65704:CDS
CGGTATATTTGGTGTTCCAA+TGG 0.480390 5.2:+48986660 MS.gene65704:CDS
TCGTAACATTTGGTGTAAGA+TGG 0.482559 5.2:-48986949 None:intergenic
CCATGTTCCTTGATTGTCAC+CGG 0.482726 5.2:-48986599 None:intergenic
TATATTTGGTGTTCCAATGG+TGG 0.488042 5.2:+48986663 MS.gene65704:CDS
CATCCTGGTCCTGTTCCATT+CGG 0.492605 5.2:-48986298 None:intergenic
TCAATCCATAGGCCATCAAC+AGG 0.494568 5.2:-48986214 None:intergenic
CTATTGCATAGTTCTTCGGT+TGG 0.495596 5.2:-48986715 None:intergenic
CTTCAGATGAAAATAGAAGA+AGG 0.497979 5.2:-48982534 None:intergenic
TTTCTCAGATCCATATACAT+AGG 0.497998 5.2:-48983447 None:intergenic
TTTGCAATGACATGGAAAAT+GGG 0.500725 5.2:+48987639 MS.gene65704:CDS
ACTTAGCATAGAACCTAAGA+AGG 0.505923 5.2:-48982690 None:intergenic
AAGTAAACTGTACCAACTAC+CGG 0.513439 5.2:-48987061 None:intergenic
ATATTTGGTGTTCCAATGGT+GGG 0.513486 5.2:+48986664 MS.gene65704:CDS
TTATCATGGTCCACTTATGT+TGG 0.514222 5.2:+48986550 MS.gene65704:CDS
GTACTTGATGAAAACATCGT+TGG 0.516123 5.2:-48986074 None:intergenic
GAACTTCCAGAAATGAAGCT+TGG 0.516701 5.2:+48987306 MS.gene65704:CDS
CAGTTGTATATAAAGTATAA+GGG 0.516738 5.2:-48983380 None:intergenic
GGCTCAAGTGTGGCCAGGGG+CGG 0.518577 5.2:+48986114 MS.gene65704:CDS
ACCAATAAGGGCACCATCAG+GGG 0.519110 5.2:-48982620 None:intergenic
GAGACAAGAGCTTTACCAAT+GGG 0.520375 5.2:+48986798 MS.gene65704:CDS
CCAGAAATGAAGCTTGGAAA+CGG 0.521555 5.2:+48987312 MS.gene65704:CDS
CAGGATTCCATCAATGCAGA+TGG 0.521721 5.2:+48985795 MS.gene65704:intron
GTTATAGTGGGTTGCACTAG+TGG 0.522996 5.2:-48986428 None:intergenic
AATACTCTGAGACTTCAATA+GGG 0.523308 5.2:-48983125 None:intergenic
AACCTTTCTTGGCTCAAGTG+TGG 0.523753 5.2:+48986104 MS.gene65704:CDS
ATCCAAAGACGGTATCTTGG+TGG 0.524403 5.2:+48986158 MS.gene65704:CDS
CATTGGACCGGTGACAATCA+AGG 0.524939 5.2:+48986592 MS.gene65704:CDS
GATGGGAAAGTAAAGAAAAG+TGG 0.526154 5.2:-48986931 None:intergenic
TTTGCCCGAACCAACATAAG+TGG 0.526839 5.2:-48986560 None:intergenic
ATCATACCAAAAGCCCAGTA+AGG 0.526889 5.2:-48983660 None:intergenic
TCAGTCAAAAGAAAATCAAA+TGG 0.527251 5.2:+48983195 MS.gene65704:CDS
AAGGTTTGTGGTAATGGTGG+TGG 0.529787 5.2:-48983084 None:intergenic
TCAACCACATTCAAAGGAGT+TGG 0.530165 5.2:-48983600 None:intergenic
CCACCATTACCACAAACCTT+AGG 0.531410 5.2:+48983087 MS.gene65704:CDS
GCCCAGTAAGGCATAGCAGC+TGG 0.532810 5.2:-48983648 None:intergenic
CGTAACATTTGGTGTAAGAT+GGG 0.532862 5.2:-48986948 None:intergenic
GGTAAATTTGCATTAGACAA+AGG 0.533539 5.2:+48987408 MS.gene65704:CDS
AAGTTGAAGGAGACCAATAA+GGG 0.534621 5.2:-48982632 None:intergenic
TGTCCGAATGGAACAGGACC+AGG 0.534970 5.2:+48986295 MS.gene65704:CDS
AGTGCTGACGTCGTAACATT+TGG 0.536417 5.2:-48986959 None:intergenic
CATTATTGACCCTGGAATTG+GGG 0.536616 5.2:+48986015 MS.gene65704:CDS
TACATTGTCATTATTGACCC+TGG 0.538902 5.2:+48986007 MS.gene65704:CDS
ACCAGCTGCTATGCCTTACT+GGG 0.538936 5.2:+48983647 MS.gene65704:CDS
CATTGGTAAAGCTCTTGTCT+CGG 0.540126 5.2:-48986796 None:intergenic
GTTGTTGAATAGTAATGGAA+TGG 0.541632 5.2:+48983503 MS.gene65704:CDS
GGCCACACTTGAGCCAAGAA+AGG 0.543319 5.2:-48986106 None:intergenic
AAATATGCTGCACATTGGAC+CGG 0.543658 5.2:+48986580 MS.gene65704:CDS
AGGGTCTTCTTGGACTTGAA+GGG 0.546238 5.2:+48986512 MS.gene65704:CDS
ATCAGTTGTTGAAGATGTTG+TGG 0.549536 5.2:+48985832 MS.gene65704:CDS
AAGACCCTTGTGAGTTGCGA+CGG 0.550455 5.2:-48986497 None:intergenic
TTCCCGGCAGGCGCATCAGA+AGG 0.550812 5.2:+48987249 MS.gene65704:CDS
GTGAAAGCGTTGTTTCCTCC+CGG 0.551187 5.2:+48987042 MS.gene65704:CDS
TATTGATCAACCACATTCAA+AGG 0.551213 5.2:-48983606 None:intergenic
TGGACCAACTCCTTTGAATG+TGG 0.552956 5.2:+48983596 MS.gene65704:CDS
AGAACATCACCAAAACAAGA+TGG 0.554704 5.2:+48986341 MS.gene65704:CDS
TTCAGATGAAAATAGAAGAA+GGG 0.555350 5.2:-48982533 None:intergenic
ACTAGTGCAACCCACTATAA+CGG 0.556439 5.2:+48986430 MS.gene65704:CDS
ATATCTCCGGTGCTCGAACA+AGG 0.557999 5.2:+48987009 MS.gene65704:CDS
GACCAATAAGGGCACCATCA+GGG 0.558124 5.2:-48982621 None:intergenic
CCTAAGGTTTGTGGTAATGG+TGG 0.558277 5.2:-48983087 None:intergenic
CCGGTGACAATCAAGGAACA+TGG 0.558617 5.2:+48986599 MS.gene65704:CDS
AAGCAGTCTCATGATATCTC+CGG 0.562483 5.2:+48986996 MS.gene65704:CDS
GCAATCCGTCGCAACTCACA+AGG 0.563418 5.2:+48986492 MS.gene65704:CDS
AGATGCAAACAAGCAAAGAT+GGG 0.564971 5.2:+48983029 MS.gene65704:CDS
TCTGGAATACAAGCTCCAAT+CGG 0.565528 5.2:+48986391 MS.gene65704:CDS
TTGAGTTAACCCCAATTCCA+GGG 0.565541 5.2:-48986024 None:intergenic
TGCAATAGATGGATTGAAGT+TGG 0.569941 5.2:+48986730 MS.gene65704:CDS
CATATGTCAGAACCCACCAT+TGG 0.570826 5.2:-48986676 None:intergenic
GGATGGAAGTGTTGGAGCAG+TGG 0.570985 5.2:+48987464 MS.gene65704:CDS
TCCAAACAACATATCCATCC+TGG 0.573951 5.2:-48986313 None:intergenic
TGAACATTGACCACATGAAG+AGG 0.574774 5.2:-48987138 None:intergenic
AAGTTTAGAAGCTTTGGACG+AGG 0.575396 5.2:-48985953 None:intergenic
CTTCATTCATGTCAATCCAT+AGG 0.576343 5.2:-48986225 None:intergenic
AGGATTCCATCAATGCAGAT+GGG 0.583052 5.2:+48985796 MS.gene65704:intron
AACCCACTATAACGGTGTCT+TGG 0.585133 5.2:+48986438 MS.gene65704:CDS
CGGGCAAATATGCTGCACAT+TGG 0.585282 5.2:+48986575 MS.gene65704:CDS
CTTGGCTCAAGTGTGGCCAG+GGG 0.588583 5.2:+48986111 MS.gene65704:CDS
CAAGTTATGGTGTATACCAA+CGG 0.591282 5.2:+48986044 MS.gene65704:CDS
CTTAGCATAGAACCTAAGAA+GGG 0.592875 5.2:-48982689 None:intergenic
GCATCAGAAGGAGATGCTAA+AGG 0.595910 5.2:+48987261 MS.gene65704:CDS
AGTTTAGAAGCTTTGGACGA+GGG 0.596956 5.2:-48985952 None:intergenic
TTGAACAAGATACACAGCAT+TGG 0.600111 5.2:+48985977 MS.gene65704:CDS
CTCATTGTAACATTCCCGGC+AGG 0.600210 5.2:+48987237 MS.gene65704:CDS
CATTTGGAAGGTGAAGGAAA+TGG 0.600808 5.2:+48987558 MS.gene65704:CDS
TCCAAAGACGGTATCTTGGT+GGG 0.601129 5.2:+48986159 MS.gene65704:CDS
TCTGAACATGTGCATTTGGA+AGG 0.603305 5.2:+48987546 MS.gene65704:CDS
GAACATCACCAAAACAAGAT+GGG 0.603407 5.2:+48986342 MS.gene65704:CDS
AACGCCAACAAAATTGGTCA+AGG 0.607751 5.2:+48982571 MS.gene65704:CDS
ACCTAAGAAGGGGAATATCA+GGG 0.608020 5.2:-48982678 None:intergenic
TGTTGTGGATAGTTACAAGA+AGG 0.610027 5.2:+48985847 MS.gene65704:CDS
TATACCGAAATTCAACATTG+TGG 0.611148 5.2:-48986644 None:intergenic
CTATATGCTAGTGTCAAACA+AGG 0.612842 5.2:+48987354 MS.gene65704:CDS
TATAAAGTATAAGGGTCACT+AGG 0.618071 5.2:-48983372 None:intergenic
ACTTGATGCACCTCTTCATG+TGG 0.619411 5.2:+48987128 MS.gene65704:CDS
CTCCAAGACACCGTTATAGT+GGG 0.622378 5.2:-48986440 None:intergenic
ATTGAGCTACTGAATCCCAT+TGG 0.625853 5.2:-48986813 None:intergenic
TTGGTAAAGCTCTTGTCTCG+GGG 0.625940 5.2:-48986794 None:intergenic
GAAGCGTTTATCTTGTAAGG+AGG 0.630030 5.2:-48986370 None:intergenic
CGAGACAAGAGCTTTACCAA+TGG 0.630428 5.2:+48986797 MS.gene65704:CDS
AGTTTGGTCAGAAGTTCAAG+AGG 0.635859 5.2:+48987386 MS.gene65704:CDS
AGTTCCGCCTGTTGATGTGA+TGG 0.636334 5.2:-48987097 None:intergenic
ATGGATCTGAGAAATAATGG+TGG 0.637533 5.2:+48983456 MS.gene65704:CDS
TACAATGAGTGTGAAGGGTG+TGG 0.638401 5.2:-48987223 None:intergenic
AAGAACACTATATGTCCGAA+TGG 0.638548 5.2:+48986283 MS.gene65704:CDS
AGAGGGTTGAGCATTCCTGT+TGG 0.649091 5.2:+48987609 MS.gene65704:CDS
ACTGTGATGGTAGCTTTGAG+AGG 0.649524 5.2:+48987591 MS.gene65704:CDS
AGTAAACTGTACCAACTACC+GGG 0.652982 5.2:-48987060 None:intergenic
CATCGTTGGCTAAACCCCGT+TGG 0.653162 5.2:-48986060 None:intergenic
GTTTGGTCAGAAGTTCAAGA+GGG 0.655783 5.2:+48987387 MS.gene65704:CDS
CGGTGACAATCAAGGAACAT+GGG 0.656912 5.2:+48986600 MS.gene65704:CDS
CGAATGGAACAGGACCAGGA+TGG 0.660202 5.2:+48986299 MS.gene65704:CDS
GGATATAATTTAATCCCATG+TGG 0.661446 5.2:-48983351 None:intergenic
CAATCCGTCGCAACTCACAA+GGG 0.662202 5.2:+48986493 MS.gene65704:CDS
CTGTGATGGTAGCTTTGAGA+GGG 0.662336 5.2:+48987592 MS.gene65704:CDS
GAATGTTACAATGAGTGTGA+AGG 0.662580 5.2:-48987229 None:intergenic
TTAGCATAGAACCTAAGAAG+GGG 0.663933 5.2:-48982688 None:intergenic
ATGGTGGGTTCTGACATATG+TGG 0.665102 5.2:+48986679 MS.gene65704:CDS
AACGACGATGATCATATGGA+CGG 0.669594 5.2:+48985896 MS.gene65704:CDS
AATGTTACAATGAGTGTGAA+GGG 0.670552 5.2:-48987228 None:intergenic
GGAGAGAATACACAACCACA+TGG 0.676026 5.2:+48983336 MS.gene65704:CDS
CAGGTACGAGTTCATGAAAG+CGG 0.680059 5.2:-48986195 None:intergenic
TCGTTCCAGATCACATCGAG+CGG 0.689132 5.2:-48985878 None:intergenic
CACACCATCACATCAACAGG+CGG 0.689960 5.2:+48987093 MS.gene65704:CDS
GGATTCCATCAATGCAGATG+GGG 0.692287 5.2:+48985797 MS.gene65704:intron
ACAATTCTACCAATGCAGCA+AGG 0.692934 5.2:+48987174 MS.gene65704:CDS
ATTCTACCAATGCAGCAAGG+TGG 0.698787 5.2:+48987177 MS.gene65704:CDS
TCCATTGAAGAAACCCCTGA+TGG 0.700898 5.2:+48982607 MS.gene65704:CDS
TGGTGAAAGTAAGACTGTGA+TGG 0.700931 5.2:+48987578 MS.gene65704:CDS
GTACGAGTTCATGAAAGCGG+CGG 0.706293 5.2:-48986192 None:intergenic
GAGAGAATACACAACCACAT+GGG 0.709781 5.2:+48983337 MS.gene65704:CDS
CATGTGCATTTGGAAGGTGA+AGG 0.717327 5.2:+48987552 MS.gene65704:CDS
TATGCTAGTGTCAAACAAGG+AGG 0.726500 5.2:+48987357 MS.gene65704:CDS
AAACTGTACCAACTACCGGG+AGG 0.768178 5.2:-48987057 None:intergenic
AGTTATGGTGTATACCAACG+GGG 0.790411 5.2:+48986046 MS.gene65704:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATTGTTAATAAGAATATA+AGG - chr5.2:48985283-48985302 None:intergenic 10.0%
!!! GAAAAAAATCTATATATTTT+TGG - chr5.2:48984474-48984493 None:intergenic 10.0%
!! AAATGTTAAAAATGTTATCA+CGG - chr5.2:48984418-48984437 None:intergenic 15.0%
!! ATTTGTCAATTATATGAAAA+AGG + chr5.2:48985658-48985677 MS.gene65704:intron 15.0%
!! TAAAAACAAAATATCAATCA+TGG + chr5.2:48984346-48984365 MS.gene65704:intron 15.0%
!! TTTATAATTGAAAATACTGA+TGG + chr5.2:48985210-48985229 MS.gene65704:intron 15.0%
!!! ATAACATTTTTAACATTTTG+TGG + chr5.2:48984420-48984439 MS.gene65704:intron 15.0%
!!! TACTTTTTTCACATTATTAT+CGG - chr5.2:48982834-48982853 None:intergenic 15.0%
!!! TGTTTTGTTAGATTAAATAA+AGG + chr5.2:48983779-48983798 MS.gene65704:intron 15.0%
!!! TTTGATTCTTTTATAAAGTT+TGG + chr5.2:48984658-48984677 MS.gene65704:intron 15.0%
!! AAAAAATAACTATGAGTCAT+TGG - chr5.2:48984606-48984625 None:intergenic 20.0%
!! AATGGTTAAATGATAAACTT+TGG + chr5.2:48983845-48983864 MS.gene65704:intron 20.0%
!! ATAAAGTTACAGAAAATCTA+AGG - chr5.2:48985615-48985634 None:intergenic 20.0%
!! ATTTACTCTCATATATTACT+TGG - chr5.2:48984184-48984203 None:intergenic 20.0%
!! CAGTTGTATATAAAGTATAA+GGG - chr5.2:48983383-48983402 None:intergenic 20.0%
!! GTCTAACATATAATTATCAA+CGG - chr5.2:48983971-48983990 None:intergenic 20.0%
!! TATATTACTGAAAAAGAACA+AGG - chr5.2:48984068-48984087 None:intergenic 20.0%
!! TATTCTTACTATTGTTATAC+AGG + chr5.2:48985776-48985795 MS.gene65704:intron 20.0%
!! TCAGTTGTATATAAAGTATA+AGG - chr5.2:48983384-48983403 None:intergenic 20.0%
!! TCCAAAAATAATTAATCAGT+TGG + chr5.2:48984280-48984299 MS.gene65704:intron 20.0%
!!! AAGAACTAAATGTGTTTTTT+AGG - chr5.2:48982720-48982739 None:intergenic 20.0%
!!! AATCTTAATGCTGATTTATA+TGG + chr5.2:48983417-48983436 MS.gene65704:CDS 20.0%
!!! AATGACTCATAGTTATTTTT+TGG + chr5.2:48984605-48984624 MS.gene65704:intron 20.0%
!!! AATTTTACACATAAACACAA+TGG - chr5.2:48985142-48985161 None:intergenic 20.0%
!!! ACCAACTGATTAATTATTTT+TGG - chr5.2:48984284-48984303 None:intergenic 20.0%
!!! ATGACTCATAGTTATTTTTT+GGG + chr5.2:48984606-48984625 MS.gene65704:intron 20.0%
!!! ATTGATTCTATTTCTGTTTT+GGG + chr5.2:48987438-48987457 MS.gene65704:CDS 20.0%
!!! TAGGTAATTGAATACTTTTT+TGG + chr5.2:48984770-48984789 MS.gene65704:intron 20.0%
!!! TATTGATTCTATTTCTGTTT+TGG + chr5.2:48987437-48987456 MS.gene65704:CDS 20.0%
! AACTATAAAGCAATACATGT+GGG + chr5.2:48984911-48984930 MS.gene65704:intron 25.0%
! ACCTGTATATTAATGTATGA+TGG + chr5.2:48984629-48984648 MS.gene65704:intron 25.0%
! AGTAATAATGAAAAACGTGT+AGG - chr5.2:48984961-48984980 None:intergenic 25.0%
! ATAGGTACAATTAACAACAT+TGG - chr5.2:48982960-48982979 None:intergenic 25.0%
! ATAGTTGCATTTCAAAAAGT+TGG - chr5.2:48984897-48984916 None:intergenic 25.0%
! ATATCCACAATGTTGAATTT+CGG + chr5.2:48986640-48986659 MS.gene65704:CDS 25.0%
! ATCATTTCACACACAAAATA+TGG + chr5.2:48984808-48984827 MS.gene65704:intron 25.0%
! ATGTTGAATTTCGGTATATT+TGG + chr5.2:48986649-48986668 MS.gene65704:CDS 25.0%
! CCTGTATATTAATGTATGAT+GGG + chr5.2:48984630-48984649 MS.gene65704:intron 25.0%
! CTGTATATTAATGTATGATG+GGG + chr5.2:48984631-48984650 MS.gene65704:intron 25.0%
! GATCAATATACTACTTTGAT+TGG + chr5.2:48983621-48983640 MS.gene65704:CDS 25.0%
! TAAATATAAGCTTCCTTTGT+TGG + chr5.2:48985080-48985099 MS.gene65704:intron 25.0%
! TAATGTAATCTAACATGTCA+TGG + chr5.2:48982861-48982880 MS.gene65704:intron 25.0%
! TATATGGATCTGAGAAATAA+TGG + chr5.2:48983453-48983472 MS.gene65704:CDS 25.0%
! TCAGTCAAAAGAAAATCAAA+TGG + chr5.2:48983195-48983214 MS.gene65704:CDS 25.0%
! TGAAAACAAGTGAACTAAAT+GGG - chr5.2:48983257-48983276 None:intergenic 25.0%
! TGTATATTAATGTATGATGG+GGG + chr5.2:48984632-48984651 MS.gene65704:intron 25.0%
! TGTCAAATACTAATTATGGT+AGG - chr5.2:48985355-48985374 None:intergenic 25.0%
! TTCAGATGAAAATAGAAGAA+GGG - chr5.2:48982536-48982555 None:intergenic 25.0%
! TTGAAAACAAGTGAACTAAA+TGG - chr5.2:48983258-48983277 None:intergenic 25.0%
! TTGTTGAAATCTCAAGATAT+TGG - chr5.2:48983284-48983303 None:intergenic 25.0%
!! AACCTTTATGCTAAAGTTTT+GGG + chr5.2:48984862-48984881 MS.gene65704:intron 25.0%
!! AGGACAAATTTAGAATAAAG+AGG - chr5.2:48984217-48984236 None:intergenic 25.0%
!! AGTAACACTTTTGCAAAAAT+TGG + chr5.2:48983807-48983826 MS.gene65704:intron 25.0%
!! GATATCATCAAAATCTTTTC+TGG + chr5.2:48984725-48984744 MS.gene65704:intron 25.0%
!! GTAACACTTTTGCAAAAATT+GGG + chr5.2:48983808-48983827 MS.gene65704:intron 25.0%
!! TAACACTTTTGCAAAAATTG+GGG + chr5.2:48983809-48983828 MS.gene65704:intron 25.0%
!! TAGTTTAAGGTGTAAAGATA+TGG - chr5.2:48986877-48986896 None:intergenic 25.0%
!! TCTTTGACTTATAAGGTTAT+TGG + chr5.2:48983546-48983565 MS.gene65704:CDS 25.0%
!! TTATCATGAGAGAATTTTCA+TGG + chr5.2:48984558-48984577 MS.gene65704:intron 25.0%
!! TTTTCACATTATTATCGGTA+TGG - chr5.2:48982829-48982848 None:intergenic 25.0%
!!! AAAGGCCTTTTATTTTATCA+TGG + chr5.2:48986536-48986555 MS.gene65704:CDS 25.0%
!!! AAGTTTGTTCTGCATTTTTT+AGG + chr5.2:48984378-48984397 MS.gene65704:intron 25.0%
!!! ATAATTAATCAGTTGGTAGA+TGG + chr5.2:48984287-48984306 MS.gene65704:intron 25.0%
!!! CATTTTTTAGGATTCATGTA+AGG + chr5.2:48984390-48984409 MS.gene65704:intron 25.0%
!!! GTTTTGTTGTTGAATAGTAA+TGG + chr5.2:48983498-48983517 MS.gene65704:CDS 25.0%
!!! TAATTAATCAGTTGGTAGAT+GGG + chr5.2:48984288-48984307 MS.gene65704:intron 25.0%
!!! TATTTTTGGATGTAGTTGAA+AGG - chr5.2:48984270-48984289 None:intergenic 25.0%
!!! TTCTTTTTTTTAGATGTGTG+TGG + chr5.2:48982735-48982754 MS.gene65704:intron 25.0%
!!! TTTGATTTTTACTTCTTCTC+TGG + chr5.2:48983576-48983595 MS.gene65704:CDS 25.0%
!!! TTTTGACTGAGAAACTAAAT+GGG - chr5.2:48983185-48983204 None:intergenic 25.0%
AACCAGAAAACCAAAATCTA+TGG + chr5.2:48982655-48982674 MS.gene65704:CDS 30.0%
AATGTTACAATGAGTGTGAA+GGG - chr5.2:48987231-48987250 None:intergenic 30.0%
AATTTAATGGAGGAGAAAGA+TGG + chr5.2:48985467-48985486 MS.gene65704:intron 30.0%
ACACAATCATAGATCTGAAA+AGG - chr5.2:48984514-48984533 None:intergenic 30.0%
AGATGCTTCTTTATATGGTT+TGG + chr5.2:48983314-48983333 MS.gene65704:CDS 30.0%
ATCAATCAATCACTAACATG+TGG + chr5.2:48985115-48985134 MS.gene65704:intron 30.0%
ATCATGCTTCAAATGCAAAA+AGG + chr5.2:48985704-48985723 MS.gene65704:intron 30.0%
ATGTAAGAATTAGTTGTTGC+AGG + chr5.2:48984131-48984150 MS.gene65704:intron 30.0%
ATGTCATGGTTGTATCATAT+CGG + chr5.2:48982875-48982894 MS.gene65704:intron 30.0%
CAACTATAAAGCAATACATG+TGG + chr5.2:48984910-48984929 MS.gene65704:intron 30.0%
CATACAATCAAGTAAACATG+AGG + chr5.2:48985490-48985509 MS.gene65704:intron 30.0%
CATAGAAATGCTAAACTGTA+AGG - chr5.2:48982493-48982512 None:intergenic 30.0%
CCCATCATACATTAATATAC+AGG - chr5.2:48984633-48984652 None:intergenic 30.0%
CCTAAAGATGCTTCTTTATA+TGG + chr5.2:48983309-48983328 MS.gene65704:CDS 30.0%
CTGTTATGTGTACTCTTAAA+CGG - chr5.2:48983011-48983030 None:intergenic 30.0%
CTTCAGATGAAAATAGAAGA+AGG - chr5.2:48982537-48982556 None:intergenic 30.0%
GACATTAAAAATCTTCCACA+TGG - chr5.2:48985057-48985076 None:intergenic 30.0%
GATGCTTCTTTATATGGTTT+GGG + chr5.2:48983315-48983334 MS.gene65704:CDS 30.0%
GGATATAATTTAATCCCATG+TGG - chr5.2:48983354-48983373 None:intergenic 30.0%
GGTAAATTTGCATTAGACAA+AGG + chr5.2:48987408-48987427 MS.gene65704:CDS 30.0%
GTAAAAACTTTGCAATGACA+TGG + chr5.2:48987631-48987650 MS.gene65704:CDS 30.0%
GTGGACCATGATAAAATAAA+AGG - chr5.2:48986544-48986563 None:intergenic 30.0%
TAAATATAACCTCACTCCTT+AGG - chr5.2:48984999-48985018 None:intergenic 30.0%
TATAAAGTATAAGGGTCACT+AGG - chr5.2:48983375-48983394 None:intergenic 30.0%
TATACCGAAATTCAACATTG+TGG - chr5.2:48986647-48986666 None:intergenic 30.0%
TATATTACTTGGTCTGAACT+CGG - chr5.2:48984173-48984192 None:intergenic 30.0%
TATGATGCTCATAGTATCTA+TGG + chr5.2:48986463-48986482 MS.gene65704:CDS 30.0%
TATTGATCAACCACATTCAA+AGG - chr5.2:48983609-48983628 None:intergenic 30.0%
TCATGCTTCAAATGCAAAAA+GGG + chr5.2:48985705-48985724 MS.gene65704:intron 30.0%
TCTATGATTGTGTAATACAG+TGG + chr5.2:48984521-48984540 MS.gene65704:intron 30.0%
TCTTTCTCCTCCATTAAATT+AGG - chr5.2:48985467-48985486 None:intergenic 30.0%
TGAAATGATATCATTCCATG+TGG - chr5.2:48984797-48984816 None:intergenic 30.0%
TTAAAAATCTTCCACATGGT+TGG - chr5.2:48985053-48985072 None:intergenic 30.0%
TTCAAGAAGTTTAGAAGCTT+TGG - chr5.2:48985962-48985981 None:intergenic 30.0%
TTGACTTATAAGGTTATTGG+TGG + chr5.2:48983549-48983568 MS.gene65704:CDS 30.0%
TTTCTCAGATCCATATACAT+AGG - chr5.2:48983450-48983469 None:intergenic 30.0%
TTTGCAATGACATGGAAAAT+GGG + chr5.2:48987639-48987658 MS.gene65704:CDS 30.0%
! AGGAACTTCTTTGACTTATA+AGG + chr5.2:48983539-48983558 MS.gene65704:CDS 30.0%
! AGTTCTTTTATCAAAGCTTC+AGG - chr5.2:48985733-48985752 None:intergenic 30.0%
! ATTGCAAAGTTTTTACCAAC+AGG - chr5.2:48987627-48987646 None:intergenic 30.0%
! CAACCTTTATGCTAAAGTTT+TGG + chr5.2:48984861-48984880 MS.gene65704:intron 30.0%
! CTAGAAATGCTTTAGGTATA+AGG + chr5.2:48986839-48986858 MS.gene65704:CDS 30.0%
! GGAATGGATGTGTTTTATAA+AGG + chr5.2:48983519-48983538 MS.gene65704:CDS 30.0%
! GGAGTGTCAAATACTAATTA+TGG - chr5.2:48985359-48985378 None:intergenic 30.0%
! GTTGTTGAATAGTAATGGAA+TGG + chr5.2:48983503-48983522 MS.gene65704:CDS 30.0%
! GTTTTTATTATTTGTGCCAG+CGG - chr5.2:48984333-48984352 None:intergenic 30.0%
! TCTTTCTATTTTGCTACCTA+AGG + chr5.2:48984980-48984999 MS.gene65704:intron 30.0%
! TGATTTTCTCAATCCAAAGA+CGG + chr5.2:48986147-48986166 MS.gene65704:CDS 30.0%
! TTTTTATTATTTGTGCCAGC+GGG - chr5.2:48984332-48984351 None:intergenic 30.0%
!! AAGTTGAAGTTGAGTTGAAA+AGG - chr5.2:48983227-48983246 None:intergenic 30.0%
!! AATACTCTGAGACTTCAATA+GGG - chr5.2:48983128-48983147 None:intergenic 30.0%
!! AGTTGAAGTTGAGTTGAAAA+GGG - chr5.2:48983226-48983245 None:intergenic 30.0%
!! CCATATAAAGAAGCATCTTT+AGG - chr5.2:48983312-48983331 None:intergenic 30.0%
!! CTTTTGACTGAGAAACTAAA+TGG - chr5.2:48983186-48983205 None:intergenic 30.0%
!!! TGTACCTATTTGTTTTTTGC+AGG + chr5.2:48982971-48982990 MS.gene65704:intron 30.0%
!!! TTCTATTTCTGTTTTGGGAT+TGG + chr5.2:48987443-48987462 MS.gene65704:CDS 30.0%
AACATGTGCTTCGTAGTTTA+AGG - chr5.2:48986890-48986909 None:intergenic 35.0%
AAGAACACTATATGTCCGAA+TGG + chr5.2:48986283-48986302 MS.gene65704:CDS 35.0%
AAGGAACATGGGAGAATTTA+AGG + chr5.2:48986611-48986630 MS.gene65704:CDS 35.0%
AAGTAAACTGTACCAACTAC+CGG - chr5.2:48987064-48987083 None:intergenic 35.0%
AAGTTATGGTGTATACCAAC+GGG + chr5.2:48986045-48986064 MS.gene65704:CDS 35.0%
AAGTTGAAGGAGACCAATAA+GGG - chr5.2:48982635-48982654 None:intergenic 35.0%
ACTTAGCATAGAACCTAAGA+AGG - chr5.2:48982693-48982712 None:intergenic 35.0%
AGAACATCACCAAAACAAGA+TGG + chr5.2:48986341-48986360 MS.gene65704:CDS 35.0%
AGATGCAAACAAGCAAAGAT+GGG + chr5.2:48983029-48983048 MS.gene65704:CDS 35.0%
ATATTACTTGGTCTGAACTC+GGG - chr5.2:48984172-48984191 None:intergenic 35.0%
ATCAGTTGTTGAAGATGTTG+TGG + chr5.2:48985832-48985851 MS.gene65704:CDS 35.0%
ATGGATCTGAGAAATAATGG+TGG + chr5.2:48983456-48983475 MS.gene65704:CDS 35.0%
ATTCGGACATATAGTGTTCT+TGG - chr5.2:48986284-48986303 None:intergenic 35.0%
ATTGGGGTTAACTCAAGTTA+TGG + chr5.2:48986031-48986050 MS.gene65704:CDS 35.0%
CAAGTTATGGTGTATACCAA+CGG + chr5.2:48986044-48986063 MS.gene65704:CDS 35.0%
CAATCTGCTAGAAATGCTTT+AGG + chr5.2:48986832-48986851 MS.gene65704:CDS 35.0%
CATGCCTGCAAAAAACAAAT+AGG - chr5.2:48982978-48982997 None:intergenic 35.0%
CCATCTATTGCATAGTTCTT+CGG - chr5.2:48986722-48986741 None:intergenic 35.0%
CTAGATGGAAAACCACTAAT+TGG + chr5.2:48987498-48987517 MS.gene65704:CDS 35.0%
CTATATGCTAGTGTCAAACA+AGG + chr5.2:48987354-48987373 MS.gene65704:CDS 35.0%
CTGTCACTGTTTGTTTGATT+TGG + chr5.2:48984703-48984722 MS.gene65704:intron 35.0%
CTTAGCATAGAACCTAAGAA+GGG - chr5.2:48982692-48982711 None:intergenic 35.0%
CTTCATTCATGTCAATCCAT+AGG - chr5.2:48986228-48986247 None:intergenic 35.0%
CTTTGCAATGACATGGAAAA+TGG + chr5.2:48987638-48987657 MS.gene65704:CDS 35.0%
GAACATCACCAAAACAAGAT+GGG + chr5.2:48986342-48986361 MS.gene65704:CDS 35.0%
GAAGCTTCAAATTTCTGTTC+TGG + chr5.2:48986244-48986263 MS.gene65704:CDS 35.0%
GAATGTTACAATGAGTGTGA+AGG - chr5.2:48987232-48987251 None:intergenic 35.0%
GACCCAAAACTTTAGCATAA+AGG - chr5.2:48984867-48984886 None:intergenic 35.0%
GATGGGAAAGTAAAGAAAAG+TGG - chr5.2:48986934-48986953 None:intergenic 35.0%
GCAGGATTTGCCTAATTTAA+TGG + chr5.2:48985454-48985473 MS.gene65704:intron 35.0%
GCATGATGCATAAGAATCTA+AGG - chr5.2:48985691-48985710 None:intergenic 35.0%
GCTGCATTTGTGATAAACTA+TGG + chr5.2:48983867-48983886 MS.gene65704:intron 35.0%
GGATTTGCCTAATTTAATGG+AGG + chr5.2:48985457-48985476 MS.gene65704:intron 35.0%
GTACTTGATGAAAACATCGT+TGG - chr5.2:48986077-48986096 None:intergenic 35.0%
GTCTTTGGATTGAGAAAATC+AGG - chr5.2:48986148-48986167 None:intergenic 35.0%
GTTGGTACAGTTTACTTGAT+TGG + chr5.2:48987067-48987086 MS.gene65704:CDS 35.0%
TAACACTCAACAACAAAAGC+TGG - chr5.2:48984752-48984771 None:intergenic 35.0%
TACATTGTCATTATTGACCC+TGG + chr5.2:48986007-48986026 MS.gene65704:CDS 35.0%
TACTTCTGAACATGTGCATT+TGG + chr5.2:48987542-48987561 MS.gene65704:CDS 35.0%
TCAGTTAATGTCACCAACAA+AGG - chr5.2:48985096-48985115 None:intergenic 35.0%
TCATTATTGACCCTGGAATT+GGG + chr5.2:48986014-48986033 MS.gene65704:CDS 35.0%
TGGATCTCATCCTATGTATA+TGG + chr5.2:48983437-48983456 MS.gene65704:CDS 35.0%
TGTTGTGGATAGTTACAAGA+AGG + chr5.2:48985847-48985866 MS.gene65704:CDS 35.0%
TTAGCATAGAACCTAAGAAG+GGG - chr5.2:48982691-48982710 None:intergenic 35.0%
TTATCATGGTCCACTTATGT+TGG + chr5.2:48986550-48986569 MS.gene65704:CDS 35.0%
TTCGGACATATAGTGTTCTT+GGG - chr5.2:48986283-48986302 None:intergenic 35.0%
TTGAACAAGATACACAGCAT+TGG + chr5.2:48985977-48985996 MS.gene65704:CDS 35.0%
TTTCCTAAGGTTTGTGGTAA+TGG - chr5.2:48983093-48983112 None:intergenic 35.0%
! AAGAAAAGTGGTCTTGCAAT+TGG - chr5.2:48986922-48986941 None:intergenic 35.0%
! AATATCAGGGCCATAGATTT+TGG - chr5.2:48982668-48982687 None:intergenic 35.0%
! ATTGAAGTCTCAGAGTATTC+AGG + chr5.2:48983129-48983148 MS.gene65704:CDS 35.0%
! GATGTTTTCATCAAGTACGA+AGG + chr5.2:48986079-48986098 MS.gene65704:CDS 35.0%
! TAAGTTGAAGGAGACCAATA+AGG - chr5.2:48982636-48982655 None:intergenic 35.0%
! TTTTATTATTTGTGCCAGCG+GGG - chr5.2:48984331-48984350 None:intergenic 35.0%
!! ATAGCCTTGACCAATTTTGT+TGG - chr5.2:48982578-48982597 None:intergenic 35.0%
!! ATATTTGGTGTTCCAATGGT+GGG + chr5.2:48986664-48986683 MS.gene65704:CDS 35.0%
!! CGTAACATTTGGTGTAAGAT+GGG - chr5.2:48986951-48986970 None:intergenic 35.0%
!! GAATACTCTGAGACTTCAAT+AGG - chr5.2:48983129-48983148 None:intergenic 35.0%
!! GCTATTGTTTTGTATCCGAT+TGG - chr5.2:48986409-48986428 None:intergenic 35.0%
!! TATATTTGGTGTTCCAATGG+TGG + chr5.2:48986663-48986682 MS.gene65704:CDS 35.0%
!! TCGTAACATTTGGTGTAAGA+TGG - chr5.2:48986952-48986971 None:intergenic 35.0%
!! TGCAATAGATGGATTGAAGT+TGG + chr5.2:48986730-48986749 MS.gene65704:CDS 35.0%
!!! AGACTTCAATAGGGCTTTTT+TGG - chr5.2:48983119-48983138 None:intergenic 35.0%
!!! AGCTTTTGTTGTTGAGTGTT+AGG + chr5.2:48984751-48984770 MS.gene65704:intron 35.0%
!!! ATTTCTGTTTTGGGATTGGA+TGG + chr5.2:48987447-48987466 MS.gene65704:CDS 35.0%
!!! GAATACTTTTTTGGTCCACA+TGG + chr5.2:48984779-48984798 MS.gene65704:intron 35.0%
!!! GCTTTTTTGGAACTTTCCTA+AGG - chr5.2:48983106-48983125 None:intergenic 35.0%
!!! TGGTTTTCTGGTTAAGTTGA+AGG - chr5.2:48982648-48982667 None:intergenic 35.0%
AAATATGCTGCACATTGGAC+CGG + chr5.2:48986580-48986599 MS.gene65704:CDS 40.0%
AACCTAAGAAGGGGAATATC+AGG - chr5.2:48982682-48982701 None:intergenic 40.0%
AACGACGATGATCATATGGA+CGG + chr5.2:48985896-48985915 MS.gene65704:CDS 40.0%
AACGCCAACAAAATTGGTCA+AGG + chr5.2:48982571-48982590 MS.gene65704:CDS 40.0%
AACTACGAAGCACATGTTAG+TGG + chr5.2:48986892-48986911 MS.gene65704:CDS 40.0%
AAGCAGTCTCATGATATCTC+CGG + chr5.2:48986996-48987015 MS.gene65704:CDS 40.0%
ACAATTCTACCAATGCAGCA+AGG + chr5.2:48987174-48987193 MS.gene65704:CDS 40.0%
ACCAGGATGGATATGTTGTT+TGG + chr5.2:48986312-48986331 MS.gene65704:CDS 40.0%
ACCTAAGAAGGGGAATATCA+GGG - chr5.2:48982681-48982700 None:intergenic 40.0%
ACTAGTGCAACCCACTATAA+CGG + chr5.2:48986430-48986449 MS.gene65704:CDS 40.0%
ACTATATGTCCGAATGGAAC+AGG + chr5.2:48986289-48986308 MS.gene65704:CDS 40.0%
AGGATTCCATCAATGCAGAT+GGG + chr5.2:48985796-48985815 MS.gene65704:intron 40.0%
AGGGTAGTTCTTTGGATTCA+AGG - chr5.2:48985936-48985955 None:intergenic 40.0%
AGTAAACTGTACCAACTACC+GGG - chr5.2:48987063-48987082 None:intergenic 40.0%
AGTTATGGTGTATACCAACG+GGG + chr5.2:48986046-48986065 MS.gene65704:CDS 40.0%
AGTTTGGTCAGAAGTTCAAG+AGG + chr5.2:48987386-48987405 MS.gene65704:CDS 40.0%
ATCATACCAAAAGCCCAGTA+AGG - chr5.2:48983663-48983682 None:intergenic 40.0%
ATTGAGCTACTGAATCCCAT+TGG - chr5.2:48986816-48986835 None:intergenic 40.0%
ATTGGTAAAGCTCTTGTCTC+GGG - chr5.2:48986798-48986817 None:intergenic 40.0%
CACACTCATTGTAACATTCC+CGG + chr5.2:48987233-48987252 MS.gene65704:CDS 40.0%
CAGATGCAAACAAGCAAAGA+TGG + chr5.2:48983028-48983047 MS.gene65704:CDS 40.0%
CATTATTGACCCTGGAATTG+GGG + chr5.2:48986015-48986034 MS.gene65704:CDS 40.0%
CATTGGTAAAGCTCTTGTCT+CGG - chr5.2:48986799-48986818 None:intergenic 40.0%
CATTTGGAAGGTGAAGGAAA+TGG + chr5.2:48987558-48987577 MS.gene65704:CDS 40.0%
CCAGAAATGAAGCTTGGAAA+CGG + chr5.2:48987312-48987331 MS.gene65704:CDS 40.0%
CCGAAGAACTATGCAATAGA+TGG + chr5.2:48986719-48986738 MS.gene65704:CDS 40.0%
CCTTACAAGATAAACGCTTC+TGG + chr5.2:48986373-48986392 MS.gene65704:CDS 40.0%
CTATTGCATAGTTCTTCGGT+TGG - chr5.2:48986718-48986737 None:intergenic 40.0%
GAACTTCCAGAAATGAAGCT+TGG + chr5.2:48987306-48987325 MS.gene65704:CDS 40.0%
GAGACAAGAGCTTTACCAAT+GGG + chr5.2:48986798-48986817 MS.gene65704:CDS 40.0%
GAGAGAATACACAACCACAT+GGG + chr5.2:48983337-48983356 MS.gene65704:CDS 40.0%
GGATGTAGTTGAAAGGAAAG+TGG - chr5.2:48984263-48984282 None:intergenic 40.0%
GTCATTATTGACCCTGGAAT+TGG + chr5.2:48986013-48986032 MS.gene65704:CDS 40.0%
GTTGTATCCGACATTAGTGT+CGG - chr5.2:48982796-48982815 None:intergenic 40.0%
GTTTGGTCAGAAGTTCAAGA+GGG + chr5.2:48987387-48987406 MS.gene65704:CDS 40.0%
TATGCTAGTGTCAAACAAGG+AGG + chr5.2:48987357-48987376 MS.gene65704:CDS 40.0%
TCAACCACATTCAAAGGAGT+TGG - chr5.2:48983603-48983622 None:intergenic 40.0%
TCAATCCAAAGACGGTATCT+TGG + chr5.2:48986155-48986174 MS.gene65704:CDS 40.0%
TCCAAACAACATATCCATCC+TGG - chr5.2:48986316-48986335 None:intergenic 40.0%
TCCTCAAACGCCAACAAAAT+TGG + chr5.2:48982565-48982584 MS.gene65704:CDS 40.0%
TCTCTTGGGATAAGGTTGTA+TGG - chr5.2:48983060-48983079 None:intergenic 40.0%
TCTGAAAAGGCTTGTCTCTT+TGG - chr5.2:48984501-48984520 None:intergenic 40.0%
TCTGAACATGTGCATTTGGA+AGG + chr5.2:48987546-48987565 MS.gene65704:CDS 40.0%
TGAACATTGACCACATGAAG+AGG - chr5.2:48987141-48987160 None:intergenic 40.0%
TGGAACTTTCCTAAGGTTTG+TGG - chr5.2:48983099-48983118 None:intergenic 40.0%
TGGGGCTTACATTATGTGAA+TGG + chr5.2:48983827-48983846 MS.gene65704:intron 40.0%
TGGTGAAAGTAAGACTGTGA+TGG + chr5.2:48987578-48987597 MS.gene65704:CDS 40.0%
TGGTTGTATCATATCGGTGT+TGG + chr5.2:48982881-48982900 MS.gene65704:intron 40.0%
TTCTTACATGACCAATGCTG+AGG - chr5.2:48984120-48984139 None:intergenic 40.0%
TTCTTGGACTTGAAGGGAAA+AGG + chr5.2:48986518-48986537 MS.gene65704:CDS 40.0%
TTGAGTTAACCCCAATTCCA+GGG - chr5.2:48986027-48986046 None:intergenic 40.0%
! AACAAGGAGGTGTGAAAGTT+TGG + chr5.2:48987370-48987389 MS.gene65704:CDS 40.0%
! ACCAATTTTGTTGGCGTTTG+AGG - chr5.2:48982569-48982588 None:intergenic 40.0%
! ATAGTTCTTCGGTTGGTTGT+GGG - chr5.2:48986711-48986730 None:intergenic 40.0%
! ATGGTCCACTTATGTTGGTT+CGG + chr5.2:48986555-48986574 MS.gene65704:CDS 40.0%
! ATTTTGCTACCTAAGGAGTG+AGG + chr5.2:48984987-48985006 MS.gene65704:intron 40.0%
! GAAGCGTTTATCTTGTAAGG+AGG - chr5.2:48986373-48986392 None:intergenic 40.0%
! GTCAGCACTCAGTTTTTACT+CGG + chr5.2:48986973-48986992 MS.gene65704:CDS 40.0%
! GTTTTATAGCACCAACCATG+TGG + chr5.2:48985039-48985058 MS.gene65704:intron 40.0%
! TCTGGAATACAAGCTCCAAT+CGG + chr5.2:48986391-48986410 MS.gene65704:CDS 40.0%
!! AAACCACTAATTGGCTTGTC+AGG + chr5.2:48987507-48987526 MS.gene65704:CDS 40.0%
!! AAGTTTAGAAGCTTTGGACG+AGG - chr5.2:48985956-48985975 None:intergenic 40.0%
!! AGTTTAGAAGCTTTGGACGA+GGG - chr5.2:48985955-48985974 None:intergenic 40.0%
!! CCAGAAGCGTTTATCTTGTA+AGG - chr5.2:48986376-48986395 None:intergenic 40.0%
!! CGGTATATTTGGTGTTCCAA+TGG + chr5.2:48986660-48986679 MS.gene65704:CDS 40.0%
!! TCAGAAGTGTCAGTACTACA+TGG + chr5.2:48982923-48982942 MS.gene65704:intron 40.0%
!!! GGCCATAGATTTTGGTTTTC+TGG - chr5.2:48982660-48982679 None:intergenic 40.0%
AAATTCCGCTCGATGTGATC+TGG + chr5.2:48985873-48985892 MS.gene65704:CDS 45.0%
AACCCACTATAACGGTGTCT+TGG + chr5.2:48986438-48986457 MS.gene65704:CDS 45.0%
AACCTTTCTTGGCTCAAGTG+TGG + chr5.2:48986104-48986123 MS.gene65704:CDS 45.0%
AAGGGTCTTCTTGGACTTGA+AGG + chr5.2:48986511-48986530 MS.gene65704:CDS 45.0%
ACACCTGACAAGCCAATTAG+TGG - chr5.2:48987513-48987532 None:intergenic 45.0%
ACAGCCTTGATCATTTGGAC+CGG + chr5.2:48985401-48985420 MS.gene65704:intron 45.0%
ACCATCAGGGGTTTCTTCAA+TGG - chr5.2:48982611-48982630 None:intergenic 45.0%
ACTCACACCATCACATCAAC+AGG + chr5.2:48987090-48987109 MS.gene65704:CDS 45.0%
ACTCCAAGACACCGTTATAG+TGG - chr5.2:48986444-48986463 None:intergenic 45.0%
ACTTGATGCACCTCTTCATG+TGG + chr5.2:48987128-48987147 MS.gene65704:CDS 45.0%
AGGGTCTTCTTGGACTTGAA+GGG + chr5.2:48986512-48986531 MS.gene65704:CDS 45.0%
ATCAATCCACCTTGCTGCAT+TGG - chr5.2:48987186-48987205 None:intergenic 45.0%
ATCCAAAGACGGTATCTTGG+TGG + chr5.2:48986158-48986177 MS.gene65704:CDS 45.0%
ATCCCACAGCCTTGATCATT+TGG + chr5.2:48985396-48985415 MS.gene65704:intron 45.0%
ATTCTACCAATGCAGCAAGG+TGG + chr5.2:48987177-48987196 MS.gene65704:CDS 45.0%
CAGGATTCCATCAATGCAGA+TGG + chr5.2:48985795-48985814 MS.gene65704:intron 45.0%
CAGGTACGAGTTCATGAAAG+CGG - chr5.2:48986198-48986217 None:intergenic 45.0%
CATATGTCAGAACCCACCAT+TGG - chr5.2:48986679-48986698 None:intergenic 45.0%
CATGAACTCGTACCTGTTGA+TGG + chr5.2:48986202-48986221 MS.gene65704:CDS 45.0%
CATGTGCATTTGGAAGGTGA+AGG + chr5.2:48987552-48987571 MS.gene65704:CDS 45.0%
CCACCATTACCACAAACCTT+AGG + chr5.2:48983087-48983106 MS.gene65704:CDS 45.0%
CCATGTTCCTTGATTGTCAC+CGG - chr5.2:48986602-48986621 None:intergenic 45.0%
CCGTTTCCAAGCTTCATTTC+TGG - chr5.2:48987315-48987334 None:intergenic 45.0%
CGAGACAAGAGCTTTACCAA+TGG + chr5.2:48986797-48986816 MS.gene65704:CDS 45.0%
CGGTGACAATCAAGGAACAT+GGG + chr5.2:48986600-48986619 MS.gene65704:CDS 45.0%
CTCCAAGACACCGTTATAGT+GGG - chr5.2:48986443-48986462 None:intergenic 45.0%
CTGGAACGACGATGATCATA+TGG + chr5.2:48985892-48985911 MS.gene65704:CDS 45.0%
CTTGAGTTAACCCCAATTCC+AGG - chr5.2:48986028-48986047 None:intergenic 45.0%
GATATCCCCATCTGCATTGA+TGG - chr5.2:48985805-48985824 None:intergenic 45.0%
GCATCAGAAGGAGATGCTAA+AGG + chr5.2:48987261-48987280 MS.gene65704:CDS 45.0%
GGAGAGAATACACAACCACA+TGG + chr5.2:48983336-48983355 MS.gene65704:CDS 45.0%
GGATTCCATCAATGCAGATG+GGG + chr5.2:48985797-48985816 MS.gene65704:intron 45.0%
GGTGTGAGTGTGATGATTGA+TGG - chr5.2:48984099-48984118 None:intergenic 45.0%
GTACGAAGGTGAACCTTTCT+TGG + chr5.2:48986093-48986112 MS.gene65704:CDS 45.0%
GTCCAAATGATCAAGGCTGT+GGG - chr5.2:48985401-48985420 None:intergenic 45.0%
GTGGTTGTTCTCTTGGGATA+AGG - chr5.2:48983068-48983087 None:intergenic 45.0%
GTTGTTGCAGGTTTGATCCT+CGG + chr5.2:48984143-48984162 MS.gene65704:intron 45.0%
TACAATGAGTGTGAAGGGTG+TGG - chr5.2:48987226-48987245 None:intergenic 45.0%
TCAATCCATAGGCCATCAAC+AGG - chr5.2:48986217-48986236 None:intergenic 45.0%
TCCAAAGACGGTATCTTGGT+GGG + chr5.2:48986159-48986178 MS.gene65704:CDS 45.0%
TCCATTGAAGAAACCCCTGA+TGG + chr5.2:48982607-48982626 MS.gene65704:CDS 45.0%
TGGACCAACTCCTTTGAATG+TGG + chr5.2:48983596-48983615 MS.gene65704:CDS 45.0%
TTGGTAAAGCTCTTGTCTCG+GGG - chr5.2:48986797-48986816 None:intergenic 45.0%
TTTGCCCGAACCAACATAAG+TGG - chr5.2:48986563-48986582 None:intergenic 45.0%
TTTGGACGAGGGTAGTTCTT+TGG - chr5.2:48985944-48985963 None:intergenic 45.0%
! CATAGTTCTTCGGTTGGTTG+TGG - chr5.2:48986712-48986731 None:intergenic 45.0%
! GTTTTTCCTTGTTCGAGCAC+CGG - chr5.2:48987018-48987037 None:intergenic 45.0%
! TGATGCACCGACACTAATGT+CGG + chr5.2:48982786-48982805 MS.gene65704:intron 45.0%
! TTGGGATTGGATGGAAGTGT+TGG + chr5.2:48987456-48987475 MS.gene65704:CDS 45.0%
!! AAGGTTTGTGGTAATGGTGG+TGG - chr5.2:48983087-48983106 None:intergenic 45.0%
!! AATGGTGGTGGTTGTTCTCT+TGG - chr5.2:48983075-48983094 None:intergenic 45.0%
!! ACTGTGATGGTAGCTTTGAG+AGG + chr5.2:48987591-48987610 MS.gene65704:CDS 45.0%
!! AGGATCGTCCCATCTTGTTT+TGG - chr5.2:48986353-48986372 None:intergenic 45.0%
!! AGTGCTGACGTCGTAACATT+TGG - chr5.2:48986962-48986981 None:intergenic 45.0%
!! ATGGTGGGTTCTGACATATG+TGG + chr5.2:48986679-48986698 MS.gene65704:CDS 45.0%
!! ATGGTGGTGGTTGTTCTCTT+GGG - chr5.2:48983074-48983093 None:intergenic 45.0%
!! CCTAAGGTTTGTGGTAATGG+TGG - chr5.2:48983090-48983109 None:intergenic 45.0%
!! CTGTGATGGTAGCTTTGAGA+GGG + chr5.2:48987592-48987611 MS.gene65704:CDS 45.0%
!! GCAAGGTGGATTGATCTCTA+AGG + chr5.2:48987191-48987210 MS.gene65704:CDS 45.0%
!! GTTATAGTGGGTTGCACTAG+TGG - chr5.2:48986431-48986450 None:intergenic 45.0%
!! TGGTCCACTTATGTTGGTTC+GGG + chr5.2:48986556-48986575 MS.gene65704:CDS 45.0%
!! ATTTATTTGTATTAAATTAA+AGG - chr5.2:48984237-48984256 None:intergenic 5.0%
!!! GTTTAATATTTTTTTAAAAT+AGG - chr5.2:48984448-48984467 None:intergenic 5.0%
AAACTGTACCAACTACCGGG+AGG - chr5.2:48987060-48987079 None:intergenic 50.0%
AAGACCCTTGTGAGTTGCGA+CGG - chr5.2:48986500-48986519 None:intergenic 50.0%
ACACTCCAACGAGTCTACCA+GGG + chr5.2:48985372-48985391 MS.gene65704:intron 50.0%
ACAGCCGGTCCAAATGATCA+AGG - chr5.2:48985408-48985427 None:intergenic 50.0%
ACCAGCTGCTATGCCTTACT+GGG + chr5.2:48983647-48983666 MS.gene65704:CDS 50.0%
ACCCACCAAGATACCGTCTT+TGG - chr5.2:48986163-48986182 None:intergenic 50.0%
AGAGGGTTGAGCATTCCTGT+TGG + chr5.2:48987609-48987628 MS.gene65704:CDS 50.0%
AGTTCCGCCTGTTGATGTGA+TGG - chr5.2:48987100-48987119 None:intergenic 50.0%
ATATCTCCGGTGCTCGAACA+AGG + chr5.2:48987009-48987028 MS.gene65704:CDS 50.0%
CAATCCGTCGCAACTCACAA+GGG + chr5.2:48986493-48986512 MS.gene65704:CDS 50.0%
CACACCATCACATCAACAGG+CGG + chr5.2:48987093-48987112 MS.gene65704:CDS 50.0%
CATCCTGGTCCTGTTCCATT+CGG - chr5.2:48986301-48986320 None:intergenic 50.0%
CATTGGACCGGTGACAATCA+AGG + chr5.2:48986592-48986611 MS.gene65704:CDS 50.0%
CCGGTGACAATCAAGGAACA+TGG + chr5.2:48986599-48986618 MS.gene65704:CDS 50.0%
CGGGCAAATATGCTGCACAT+TGG + chr5.2:48986575-48986594 MS.gene65704:CDS 50.0%
CTCATTGTAACATTCCCGGC+AGG + chr5.2:48987237-48987256 MS.gene65704:CDS 50.0%
GCAACTCACAAGGGTCTTCT+TGG + chr5.2:48986502-48986521 MS.gene65704:CDS 50.0%
GCCCTGATATTCCCCTTCTT+AGG + chr5.2:48982677-48982696 MS.gene65704:CDS 50.0%
GGTCCAAATGATCAAGGCTG+TGG - chr5.2:48985402-48985421 None:intergenic 50.0%
GTACGAGTTCATGAAAGCGG+CGG - chr5.2:48986195-48986214 None:intergenic 50.0%
GTGGCTTCACTTGAGCTAGA+TGG + chr5.2:48987483-48987502 MS.gene65704:CDS 50.0%
TATTATTTGTGCCAGCGGGG+AGG - chr5.2:48984328-48984347 None:intergenic 50.0%
TCACACTCACACCTCAGCAT+TGG + chr5.2:48984106-48984125 MS.gene65704:intron 50.0%
TCGTTCCAGATCACATCGAG+CGG - chr5.2:48985881-48985900 None:intergenic 50.0%
TGATCATTTGGACCGGCTGT+GGG + chr5.2:48985408-48985427 MS.gene65704:intron 50.0%
TTGATCATTTGGACCGGCTG+TGG + chr5.2:48985407-48985426 MS.gene65704:intron 50.0%
! GCTATGCCTTACTGGGCTTT+TGG + chr5.2:48983654-48983673 MS.gene65704:CDS 50.0%
!! ACCAATAAGGGCACCATCAG+GGG - chr5.2:48982623-48982642 None:intergenic 50.0%
!! AGACCAATAAGGGCACCATC+AGG - chr5.2:48982625-48982644 None:intergenic 50.0%
!! GACCAATAAGGGCACCATCA+GGG - chr5.2:48982624-48982643 None:intergenic 50.0%
!! GTGAAAGCGTTGTTTCCTCC+CGG + chr5.2:48987042-48987061 MS.gene65704:CDS 50.0%
!! TCGTACCTGTTGATGGCCTA+TGG + chr5.2:48986209-48986228 MS.gene65704:CDS 50.0%
ATCAAGGCTGTGGGATACCC+TGG - chr5.2:48985392-48985411 None:intergenic 55.0%
ATCCTGCTCATGAGCCGAAC+CGG - chr5.2:48985441-48985460 None:intergenic 55.0%
CGAATGGAACAGGACCAGGA+TGG + chr5.2:48986299-48986318 MS.gene65704:CDS 55.0%
GACACTCCAACGAGTCTACC+AGG + chr5.2:48985371-48985390 MS.gene65704:intron 55.0%
GACCAGCTGCTATGCCTTAC+TGG + chr5.2:48983646-48983665 MS.gene65704:CDS 55.0%
GCAATCCGTCGCAACTCACA+AGG + chr5.2:48986492-48986511 MS.gene65704:CDS 55.0%
GGATACCCTGGTAGACTCGT+TGG - chr5.2:48985380-48985399 None:intergenic 55.0%
GGCCACACTTGAGCCAAGAA+AGG - chr5.2:48986109-48986128 None:intergenic 55.0%
TCAGGAAAGTTTACCGCCCC+TGG - chr5.2:48986130-48986149 None:intergenic 55.0%
TCTTGGCTCAAGTGTGGCCA+GGG + chr5.2:48986110-48986129 MS.gene65704:CDS 55.0%
TGTCCGAATGGAACAGGACC+AGG + chr5.2:48986295-48986314 MS.gene65704:CDS 55.0%
TTCTTGGCTCAAGTGTGGCC+AGG + chr5.2:48986109-48986128 MS.gene65704:CDS 55.0%
! ACCCCTGATGGTGCCCTTAT+TGG + chr5.2:48982619-48982638 MS.gene65704:CDS 55.0%
! CATCGTTGGCTAAACCCCGT+TGG - chr5.2:48986063-48986082 None:intergenic 55.0%
! CGTTGTTTCCTCCCGGTAGT+TGG + chr5.2:48987049-48987068 MS.gene65704:CDS 55.0%
!! GGATGGAAGTGTTGGAGCAG+TGG + chr5.2:48987464-48987483 MS.gene65704:CDS 55.0%
ATTAGTGTCCACCTCCCCGC+TGG + chr5.2:48984314-48984333 MS.gene65704:intron 60.0%
CTGTGGGACTAACCCCGGTT+CGG + chr5.2:48985424-48985443 MS.gene65704:intron 60.0%
CTTGGCTCAAGTGTGGCCAG+GGG + chr5.2:48986111-48986130 MS.gene65704:CDS 60.0%
GCCCAGTAAGGCATAGCAGC+TGG - chr5.2:48983651-48983670 None:intergenic 60.0%
TATTTGTGCCAGCGGGGAGG+TGG - chr5.2:48984325-48984344 None:intergenic 60.0%
TCCTGCTCATGAGCCGAACC+GGG - chr5.2:48985440-48985459 None:intergenic 60.0%
TCTCCTTCTGATGCGCCTGC+CGG - chr5.2:48987255-48987274 None:intergenic 60.0%
ACCGGCTGTGGGACTAACCC+CGG + chr5.2:48985419-48985438 MS.gene65704:intron 65.0%
CCTGCTCATGAGCCGAACCG+GGG - chr5.2:48985439-48985458 None:intergenic 65.0%
CTCCTTCTGATGCGCCTGCC+GGG - chr5.2:48987254-48987273 None:intergenic 65.0%
GGTCTGAACTCGGGATGCCG+AGG - chr5.2:48984163-48984182 None:intergenic 65.0%
TTCCCGGCAGGCGCATCAGA+AGG + chr5.2:48987249-48987268 MS.gene65704:CDS 65.0%
!! ACCGGGGTTAGTCCCACAGC+CGG - chr5.2:48985423-48985442 None:intergenic 65.0%
GGCTCAAGTGTGGCCAGGGG+CGG + chr5.2:48986114-48986133 MS.gene65704:CDS 70.0%
!! CCCCGGTTCGGCTCATGAGC+AGG + chr5.2:48985436-48985455 MS.gene65704:intron 70.0%


Chromosome Type Strat End Strand Name
chr5.2 gene 48982481 48987665 48982481 ID=MS.gene65704
chr5.2 mRNA 48982481 48987665 48982481 ID=MS.gene65704.t1;Parent=MS.gene65704
chr5.2 exon 48982481 48982710 48982481 ID=MS.gene65704.t1.exon1;Parent=MS.gene65704.t1
chr5.2 CDS 48982481 48982710 48982481 ID=cds.MS.gene65704.t1;Parent=MS.gene65704.t1
chr5.2 exon 48982993 48983675 48982993 ID=MS.gene65704.t1.exon2;Parent=MS.gene65704.t1
chr5.2 CDS 48982993 48983675 48982993 ID=cds.MS.gene65704.t1;Parent=MS.gene65704.t1
chr5.2 exon 48985798 48987665 48985798 ID=MS.gene65704.t1.exon3;Parent=MS.gene65704.t1
chr5.2 CDS 48985798 48987665 48985798 ID=cds.MS.gene65704.t1;Parent=MS.gene65704.t1
Gene Sequence

>MS.gene65704

ATGGTTTATCCTTACAGTTTAGCATTTCTATGCTTCTCATCTTTTCTTCTAACCCTTCTTCTATTTTCATCTGAAGCTAGTTCTTCCTCAAACGCCAACAAAATTGGTCAAGGCTATCGTCTTGTATCCATTGAAGAAACCCCTGATGGTGCCCTTATTGGTCTCCTTCAACTTAACCAGAAAACCAAAATCTATGGCCCTGATATTCCCCTTCTTAGGTTCTATGCTAAGTAAGTCCTAAAAAACACATTTAGTTCTTTTTTTTAGATGTGTGTGGAATTTTATGTTATTGTTTTGTTGTTTTATGATGCACCGACACTAATGTCGGATACAACACTGACACGTCCATACCGATAATAATGTGAAAAAAGTAATTACTTTAATGTAATCTAACATGTCATGGTTGTATCATATCGGTGTTGGACACTGAACACGCTTTCGATCAGAAGTGTCAGTACTACATGGATTTTGTTTCTCCAATGTTGTTAATTGTACCTATTTGTTTTTTGCAGGCATGAAACAGAGAACCGTTTAAGAGTACACATAACAGATGCAAACAAGCAAAGATGGGAAGTACCATACAACCTTATCCCAAGAGAACAACCACCACCATTACCACAAACCTTAGGAAAGTTCCAAAAAAGCCCTATTGAAGTCTCAGAGTATTCAGGCTCAGAGCTTCTATTCAGCTACATTTCAAACCCATTTAGTTTCTCAGTCAAAAGAAAATCAAATGGTGAAACCCTTTTCAACTCAACTTCAACTTCTTCAGACCCATTTAGTTCACTTGTTTTCAAAGACCAATATCTTGAGATTTCAACAAAATTACCTAAAGATGCTTCTTTATATGGTTTGGGAGAGAATACACAACCACATGGGATTAAATTATATCCTAGTGACCCTTATACTTTATATACAACTGATATTTCAGCTATTAATCTTAATGCTGATTTATATGGATCTCATCCTATGTATATGGATCTGAGAAATAATGGTGGAAAAGCTTCAGCACATGCTGTTTTGTTGTTGAATAGTAATGGAATGGATGTGTTTTATAAAGGAACTTCTTTGACTTATAAGGTTATTGGTGGTGTTTTTGATTTTTACTTCTTCTCTGGACCAACTCCTTTGAATGTGGTTGATCAATATACTACTTTGATTGGAAGACCAGCTGCTATGCCTTACTGGGCTTTTGGTATGATTCTTCACTTTTCACTTTACTCATTTTTTTTAGATTTGATTTTTTTTTTTTTTAATGCAAGATGTTAGTGACTTTGATTTTTGTGACATTGTCTTTTTGTTTTGTTAGATTAAATAAAGGAAAAAAGTAACACTTTTGCAAAAATTGGGGCTTACATTATGTGAATGGTTAAATGATAAACTTTGGCTGCATTTGTGATAAACTATGGCTGCATTTTATCTTGAATTTAATCTTTGAATTTTATTTTTAAGAATGAATTTAATTTTGATGCATTGTGAAATTTTAACCGTTGATAATTATATGTTAGACTTTAAAAATTGTTACAATTAAGATTGATTAACAATATAAAAAATGTTTACAGCTACAATATAGATGAATTAAATCCTTGTTCTTTTTCAGTAATATATGATAGTACCATCAATCATCACACTCACACCTCAGCATTGGTCATGTAAGAATTAGTTGTTGCAGGTTTGATCCTCGGCATCCCGAGTTCAGACCAAGTAATATATGAGAGTAAATTTTAGTGTAACCTCTTTATTCTAAATTTGTCCTTTAATTTAATACAAATAAATTTACCACTTTCCTTTCAACTACATCCAAAAATAATTAATCAGTTGGTAGATGGGTCTATTAGTGTCCACCTCCCCGCTGGCACAAATAATAAAAACAAAATATCAATCATGGCATCTTGCTAAGTTTGTTCTGCATTTTTTAGGATTCATGTAAGGAACCGTGATAACATTTTTAACATTTTGTGGTACCTATTTTAAAAAAATATTAAACATACCAAAAATATATAGATTTTTTTCAAAACCAAAGAGACAAGCCTTTTCAGATCTATGATTGTGTAATACAGTGGCTTTCTTGATTTTTTTATCATGAGAGAATTTTCATGGTATGCAAAATACATTTGAGAATCCAATGACTCATAGTTATTTTTTGGGACCTGTATATTAATGTATGATGGGGGTGCTTTGATTCTTTTATAAAGTTTGGTTTTTCAATGTTTTTTTCGATTCTGTCACTGTTTGTTTGATTTGGATATCATCAAAATCTTTTCTGGTCCAGCTTTTGTTGTTGAGTGTTAGGTAATTGAATACTTTTTTGGTCCACATGGAATGATATCATTTCACACACAAAATATGGAAACTTAACTCTACAATATGAAAAATAATTCAACCTTTATGCTAAAGTTTTGGGTCAAGAATTCCAACTTTTTGAAATGCAACTATAAAGCAATACATGTGGGTCGTTGTCAAAGTTATTAGTATTACCTACACGTTTTTCATTATTACTCTTTCTATTTTGCTACCTAAGGAGTGAGGTTATATTTAAGTTTGTTACAAATTGTGTTGTTTTATAGCACCAACCATGTGGAAGATTTTTAATGTCTTTTAAATATAAGCTTCCTTTGTTGGTGACATTAACTGATCAATCAATCACTAACATGTGGTCCATTGTGTTTATGTGTAAAATTCAATTATCAATTTTCTTTCATGTATTTACATTGTTAAATTTTGAAAAATTTATAATTGAAAATACTGATGGAAAAAATATATATAATTAAAAAAATAACAAATAAAATAAGCATAAAGCCTTATATTCTTATTAACAATAAAAAATGTGCTTATTTTTCAAATTAATTTAATTTAATTTATTTTTTTGAACCTACCATAATTAGTATTTGACACTCCAACGAGTCTACCAGGGTATCCCACAGCCTTGATCATTTGGACCGGCTGTGGGACTAACCCCGGTTCGGCTCATGAGCAGGATTTGCCTAATTTAATGGAGGAGAAAGATGGCATACAATCAAGTAAACATGAGGTTAAAATGTTAGACTCATTGTGCAAAAATGATGAAAGATTTTGTTTACACTCTTGAGTTTGATCTTGAAATCTAAATCGTTTCAACACTCTTGAGTTTGCCTTAGATTTTCTGTAACTTTATCTACATGTTAATGTTGCTACTTCATTTGTCAATTATATGAAAAAGGTTGATATCCTTAGATTCTTATGCATCATGCTTCAAATGCAAAAAGGGTACCTGAAGCTTTGATAAAAGAACTTTATGTTTTAAGTTTCTAACTGATATTCTTACTATTGTTATACAGGATTCCATCAATGCAGATGGGGATATCACAATCTATCAGTTGTTGAAGATGTTGTGGATAGTTACAAGAAGGCTCAAATTCCGCTCGATGTGATCTGGAACGACGATGATCATATGGACGGACACAAAGACTTCACCTTGAATCCAAAGAACTACCCTCGTCCAAAGCTTCTAAACTTCTTGAACAAGATACACAGCATTGGCATGAAATACATTGTCATTATTGACCCTGGAATTGGGGTTAACTCAAGTTATGGTGTATACCAACGGGGTTTAGCCAACGATGTTTTCATCAAGTACGAAGGTGAACCTTTCTTGGCTCAAGTGTGGCCAGGGGCGGTAAACTTTCCTGATTTTCTCAATCCAAAGACGGTATCTTGGTGGGTTGACGAGATCCGCCGCTTTCATGAACTCGTACCTGTTGATGGCCTATGGATTGACATGAATGAAGCTTCAAATTTCTGTTCTGGTAAATGCAAAATTCCCAAGAACACTATATGTCCGAATGGAACAGGACCAGGATGGATATGTTGTTTGGATTGCAAGAACATCACCAAAACAAGATGGGACGATCCTCCTTACAAGATAAACGCTTCTGGAATACAAGCTCCAATCGGATACAAAACAATAGCCACTAGTGCAACCCACTATAACGGTGTCTTGGAGTATGATGCTCATAGTATCTATGGTTTCTCGCAATCCGTCGCAACTCACAAGGGTCTTCTTGGACTTGAAGGGAAAAGGCCTTTTATTTTATCATGGTCCACTTATGTTGGTTCGGGCAAATATGCTGCACATTGGACCGGTGACAATCAAGGAACATGGGAGAATTTAAGGTATTCAATATCCACAATGTTGAATTTCGGTATATTTGGTGTTCCAATGGTGGGTTCTGACATATGTGGATTTTACCCACAACCAACCGAAGAACTATGCAATAGATGGATTGAAGTTGGTGCTTTCTACCCATTTTCAAGAGATCATGCAAACTACTACTCCCCGAGACAAGAGCTTTACCAATGGGATTCAGTAGCTCAATCTGCTAGAAATGCTTTAGGTATAAGGTACAAGATTCTACCATATCTTTACACCTTAAACTACGAAGCACATGTTAGTGGATCACCAATTGCAAGACCACTTTTCTTTACTTTCCCATCTTACACCAAATGTTACGACGTCAGCACTCAGTTTTTACTCGGAAGCAGTCTCATGATATCTCCGGTGCTCGAACAAGGAAAAACACAAGTGAAAGCGTTGTTTCCTCCCGGTAGTTGGTACAGTTTACTTGATTGGACTCACACCATCACATCAACAGGCGGAACTTATGTTACACTTGATGCACCTCTTCATGTGGTCAATGTTCATTTATATCAGAACACAATTCTACCAATGCAGCAAGGTGGATTGATCTCTAAGGATGCTCGAACCACACCCTTCACACTCATTGTAACATTCCCGGCAGGCGCATCAGAAGGAGATGCTAAAGGAACACTTTTCATTGACGACGATGAACTTCCAGAAATGAAGCTTGGAAACGGCTATTCGAGTTTTATCGATCTATATGCTAGTGTCAAACAAGGAGGTGTGAAAGTTTGGTCAGAAGTTCAAGAGGGTAAATTTGCATTAGACAAAGGTTTGATTATTGATTCTATTTCTGTTTTGGGATTGGATGGAAGTGTTGGAGCAGTGGCTTCACTTGAGCTAGATGGAAAACCACTAATTGGCTTGTCAGGTGTGAATGTTACTACTTCTGAACATGTGCATTTGGAAGGTGAAGGAAATGGTGAAAGTAAGACTGTGATGGTAGCTTTGAGAGGGTTGAGCATTCCTGTTGGTAAAAACTTTGCAATGACATGGAAAATGGGATGA
Protein sequence

>MS.gene65704.t1

MVYPYSLAFLCFSSFLLTLLLFSSEASSSSNANKIGQGYRLVSIEETPDGALIGLLQLNQKTKIYGPDIPLLRFYAKHETENRLRVHITDANKQRWEVPYNLIPREQPPPLPQTLGKFQKSPIEVSEYSGSELLFSYISNPFSFSVKRKSNGETLFNSTSTSSDPFSSLVFKDQYLEISTKLPKDASLYGLGENTQPHGIKLYPSDPYTLYTTDISAINLNADLYGSHPMYMDLRNNGGKASAHAVLLLNSNGMDVFYKGTSLTYKVIGGVFDFYFFSGPTPLNVVDQYTTLIGRPAAMPYWAFGFHQCRWGYHNLSVVEDVVDSYKKAQIPLDVIWNDDDHMDGHKDFTLNPKNYPRPKLLNFLNKIHSIGMKYIVIIDPGIGVNSSYGVYQRGLANDVFIKYEGEPFLAQVWPGAVNFPDFLNPKTVSWWVDEIRRFHELVPVDGLWIDMNEASNFCSGKCKIPKNTICPNGTGPGWICCLDCKNITKTRWDDPPYKINASGIQAPIGYKTIATSATHYNGVLEYDAHSIYGFSQSVATHKGLLGLEGKRPFILSWSTYVGSGKYAAHWTGDNQGTWENLRYSISTMLNFGIFGVPMVGSDICGFYPQPTEELCNRWIEVGAFYPFSRDHANYYSPRQELYQWDSVAQSARNALGIRYKILPYLYTLNYEAHVSGSPIARPLFFTFPSYTKCYDVSTQFLLGSSLMISPVLEQGKTQVKALFPPGSWYSLLDWTHTITSTGGTYVTLDAPLHVVNVHLYQNTILPMQQGGLISKDARTTPFTLIVTFPAGASEGDAKGTLFIDDDELPEMKLGNGYSSFIDLYASVKQGGVKVWSEVQEGKFALDKGLIIDSISVLGLDGSVGAVASLELDGKPLIGLSGVNVTTSEHVHLEGEGNGESKTVMVALRGLSIPVGKNFAMTWKMG