Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66985.t1 | XP_003618951.1 | 93.4 | 227 | 14 | 1 | 1 | 227 | 1 | 226 | 1.00E-121 | 446 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66985.t1 | Q9FK59 | 82.0 | 205 | 35 | 1 | 25 | 227 | 17 | 221 | 4.2e-100 | 365.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66985.t1 | G7KPL2 | 93.4 | 227 | 14 | 1 | 1 | 227 | 1 | 226 | 7.3e-122 | 446.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene055339 | MS.gene66985 | 0.810739 | 9.92E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene073893 | MS.gene66985 | PPI |
| MS.gene053448 | MS.gene66985 | PPI |
| MS.gene53524 | MS.gene66985 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66985.t1 | MTR_6g029230 | 99.119 | 227 | 1 | 1 | 1 | 227 | 1 | 226 | 1.37e-170 | 468 |
| MS.gene66985.t1 | MTR_2g018260 | 37.107 | 159 | 98 | 1 | 41 | 197 | 40 | 198 | 1.55e-36 | 128 |
| MS.gene66985.t1 | MTR_1g045130 | 35.211 | 142 | 91 | 1 | 49 | 189 | 31 | 172 | 1.14e-29 | 110 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66985.t1 | AT5G18110 | 81.951 | 205 | 35 | 1 | 25 | 227 | 17 | 221 | 1.55e-126 | 357 |
| MS.gene66985.t1 | AT4G18040 | 38.255 | 149 | 92 | 0 | 49 | 197 | 60 | 208 | 2.21e-34 | 123 |
| MS.gene66985.t1 | AT1G29550 | 34.899 | 149 | 97 | 0 | 49 | 197 | 65 | 213 | 3.90e-28 | 107 |
| MS.gene66985.t1 | AT1G29590 | 33.557 | 149 | 99 | 0 | 49 | 197 | 65 | 213 | 1.34e-27 | 105 |
| MS.gene66985.t1 | AT5G35620 | 30.601 | 183 | 118 | 4 | 38 | 215 | 15 | 193 | 1.03e-24 | 97.1 |
| MS.gene66985.t1 | AT5G35620 | 30.601 | 183 | 118 | 4 | 38 | 215 | 15 | 193 | 1.03e-24 | 97.1 |
| MS.gene66985.t1 | AT5G35620 | 31.613 | 155 | 99 | 3 | 38 | 187 | 15 | 167 | 1.83e-23 | 92.8 |
Find 46 sgRNAs with CRISPR-Local
Find 331 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTAATAGGTTGAAGGATTT+TGG | 0.117111 | 6.4:-3749587 | MS.gene66985:intron |
| AAGAAGGAATTCGTCCTTTA+TGG | 0.144383 | 6.4:-3749500 | MS.gene66985:CDS |
| ATCAGAGCAAATTTGTGTTT+TGG | 0.293172 | 6.4:-3749768 | MS.gene66985:intron |
| CTAACTGCAATGGTGGAAAA+TGG | 0.299336 | 6.4:-3749324 | MS.gene66985:CDS |
| TGCGAGACAATTCATCTTAC+AGG | 0.303636 | 6.4:-3747350 | MS.gene66985:CDS |
| TATGATTGATTTCGAATTCC+AGG | 0.328318 | 6.4:+3749730 | None:intergenic |
| GTGGGTGACCAATTGGATTA+TGG | 0.334671 | 6.4:-3747634 | MS.gene66985:CDS |
| ATGGATTATACGATTCAAAA+AGG | 0.339986 | 6.4:-3749305 | MS.gene66985:CDS |
| AATCAGAGGAATCGACAATT+TGG | 0.345426 | 6.4:+3752145 | None:intergenic |
| TGCCTTGGTGGGTGACCAAT+TGG | 0.355029 | 6.4:-3747641 | MS.gene66985:CDS |
| AGCTGGTCTTCACCCTCTTA+AGG | 0.366017 | 6.4:-3752076 | MS.gene66985:intron |
| TTGTAATGAAGAACCTTAAG+AGG | 0.394796 | 6.4:+3752063 | None:intergenic |
| GCTTCCTCACGGCTATGTTA+TGG | 0.396161 | 6.4:-3747397 | MS.gene66985:CDS |
| AGAAGGAATTCGTCCTTTAT+GGG | 0.402768 | 6.4:-3749499 | MS.gene66985:CDS |
| TTGAAAAGATGCAAATCTGT+TGG | 0.417946 | 6.4:+3749522 | None:intergenic |
| AATGCAGGTGCTTGCCTTGG+TGG | 0.418746 | 6.4:-3747653 | MS.gene66985:intron |
| CATAGCCGTGAGGAAGCTTT+AGG | 0.427935 | 6.4:+3747403 | None:intergenic |
| TTCACGAGATTGTCGTTCTT+CGG | 0.440058 | 6.4:+3752104 | None:intergenic |
| TCGCAATGCCTCTGATCATC+AGG | 0.442213 | 6.4:-3747548 | MS.gene66985:intron |
| AGATGCAAATCTGTTGGAAC+AGG | 0.449465 | 6.4:+3749528 | None:intergenic |
| ACGAGGACATAGTGAGTGTC+TGG | 0.454336 | 6.4:-3747573 | MS.gene66985:CDS |
| AAAGTATCTACCTCCCATAA+AGG | 0.458859 | 6.4:+3749486 | None:intergenic |
| TGTTATCACCATAATCCAAT+TGG | 0.464311 | 6.4:+3747626 | None:intergenic |
| TGGTACACTCGTCGGGTACC+TGG | 0.476680 | 6.4:-3749748 | MS.gene66985:CDS |
| CCAAATGCAGGTGCTTGCCT+TGG | 0.486634 | 6.4:-3747656 | MS.gene66985:intron |
| CAAATCTGTTGGAACAGGTA+AGG | 0.519572 | 6.4:+3749533 | None:intergenic |
| GACTCTGCTAACTGCAATGG+TGG | 0.541849 | 6.4:-3749331 | MS.gene66985:CDS |
| TACAGGAACACTTGGTTGAG+AGG | 0.543267 | 6.4:-3747333 | MS.gene66985:CDS |
| ATGCAGGTGCTTGCCTTGGT+GGG | 0.546695 | 6.4:-3747652 | MS.gene66985:intron |
| ATTCATCTTACAGGAACACT+TGG | 0.548432 | 6.4:-3747341 | MS.gene66985:CDS |
| GAAGATTGTTGAATTCAGTA+CGG | 0.555167 | 6.4:-3749692 | MS.gene66985:intron |
| TTTGACGTTGTAAGAATCAG+AGG | 0.556549 | 6.4:+3752131 | None:intergenic |
| GTTGGAACAGGTAAGGAAGA+AGG | 0.574741 | 6.4:+3749540 | None:intergenic |
| CAATCTCGTGAACTCAAAGC+TGG | 0.583315 | 6.4:-3752093 | MS.gene66985:CDS |
| TGTAATGAAGAACCTTAAGA+GGG | 0.586424 | 6.4:+3752064 | None:intergenic |
| AAGGACTCTGCTAACTGCAA+TGG | 0.616200 | 6.4:-3749334 | MS.gene66985:CDS |
| ATCCAATTGGTCACCCACCA+AGG | 0.621634 | 6.4:+3747639 | None:intergenic |
| AGGAAGAAGGACGAGCAAGA+TGG | 0.633931 | 6.4:+3749553 | None:intergenic |
| AGGAATTCGTCCTTTATGGG+AGG | 0.639812 | 6.4:-3749496 | MS.gene66985:intron |
| GATGCCAACCTGATGATCAG+AGG | 0.659266 | 6.4:+3747540 | None:intergenic |
| CGTCACCTAAAGCTTCCTCA+CGG | 0.685945 | 6.4:-3747408 | MS.gene66985:CDS |
| GATTATGGTGATAACATCTG+TGG | 0.694291 | 6.4:-3747619 | MS.gene66985:CDS |
| TCTCGCAGAGAAGCATCATG+CGG | 0.719756 | 6.4:+3747366 | None:intergenic |
| AATTCGAAATCAATCATACG+AGG | 0.720444 | 6.4:-3749725 | MS.gene66985:CDS |
| TACTCCATAACATAGCCGTG+AGG | 0.757014 | 6.4:+3747393 | None:intergenic |
| ACTAAGCATTCGATTCAACG+AGG | 0.817685 | 6.4:-3747590 | MS.gene66985:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTATTTTATTTTTTTAAAA+AGG | + | chr6.4:3749128-3749147 | None:intergenic | 0.0% |
| !!! | TTATTAATTTGTTTTTTGTT+AGG | - | chr6.4:3747510-3747529 | MS.gene66985:intron | 10.0% |
| !! | AAAATAAAATAAAAACTCCA+AGG | + | chr6.4:3749105-3749124 | None:intergenic | 15.0% |
| !! | AATTGTGACTTTATTATATA+TGG | - | chr6.4:3747905-3747924 | MS.gene66985:intron | 15.0% |
| !! | ATTGTGACTTTATTATATAT+GGG | - | chr6.4:3747906-3747925 | MS.gene66985:intron | 15.0% |
| !! | CAAAAATAAAATAACTTCAA+AGG | + | chr6.4:3749559-3749578 | None:intergenic | 15.0% |
| !! | TTATTATATATGGGATTTAA+GGG | - | chr6.4:3747915-3747934 | MS.gene66985:intron | 15.0% |
| !! | TTTATTATATATGGGATTTA+AGG | - | chr6.4:3747914-3747933 | MS.gene66985:intron | 15.0% |
| !! | TTTGAATTTAAACATGTTAT+AGG | - | chr6.4:3747788-3747807 | MS.gene66985:intron | 15.0% |
| !!! | AAAATTGTGACTTTATTTAT+TGG | - | chr6.4:3747746-3747765 | MS.gene66985:intron | 15.0% |
| !!! | AAATATGACTTAATATTTTG+TGG | - | chr6.4:3749397-3749416 | MS.gene66985:intron | 15.0% |
| !!! | AAGTTTATTTTAGTTAGTTA+TGG | - | chr6.4:3751739-3751758 | MS.gene66985:intron | 15.0% |
| !!! | AATATGACTTAATATTTTGT+GGG | - | chr6.4:3749398-3749417 | MS.gene66985:intron | 15.0% |
| !!! | ATATTTTTATGACCTTTATT+TGG | - | chr6.4:3751670-3751689 | MS.gene66985:intron | 15.0% |
| !!! | CAAAATATTAAGTCATATTT+TGG | + | chr6.4:3749397-3749416 | None:intergenic | 15.0% |
| !!! | CTTTGAAGTTATTTTATTTT+TGG | - | chr6.4:3749557-3749576 | MS.gene66985:CDS | 15.0% |
| !!! | TGACAATTATTTTTGTTAAT+AGG | - | chr6.4:3749938-3749957 | MS.gene66985:intron | 15.0% |
| !! | AAAGCAAATTAAACAACATT+TGG | + | chr6.4:3750162-3750181 | None:intergenic | 20.0% |
| !! | AAATTTCACTAAAAGATCAA+TGG | + | chr6.4:3751098-3751117 | None:intergenic | 20.0% |
| !! | AACACTCTAAATATATAAAC+TGG | + | chr6.4:3750442-3750461 | None:intergenic | 20.0% |
| !! | ATGTATATTGCACAAAAAAT+AGG | + | chr6.4:3750894-3750913 | None:intergenic | 20.0% |
| !! | ATGTCAATGAGTTATTATTA+AGG | + | chr6.4:3748519-3748538 | None:intergenic | 20.0% |
| !! | CGATATAATAATCTCAATTA+TGG | + | chr6.4:3748431-3748450 | None:intergenic | 20.0% |
| !! | TATTATATATGGGATTTAAG+GGG | - | chr6.4:3747916-3747935 | MS.gene66985:intron | 20.0% |
| !! | TCTAAATATATAAACTGGAA+TGG | + | chr6.4:3750437-3750456 | None:intergenic | 20.0% |
| !! | TCTATTGTGACTTTATATAT+GGG | - | chr6.4:3747582-3747601 | MS.gene66985:CDS | 20.0% |
| !! | TTAATAATAACTCATTGACA+TGG | - | chr6.4:3748518-3748537 | MS.gene66985:intron | 20.0% |
| !! | TTCTATTGTGACTTTATATA+TGG | - | chr6.4:3747581-3747600 | MS.gene66985:CDS | 20.0% |
| !! | TTTATATATGGGATTTAAGT+GGG | - | chr6.4:3747593-3747612 | MS.gene66985:CDS | 20.0% |
| !! | TTTGGAAGTTAACATAAAAA+AGG | - | chr6.4:3751616-3751635 | MS.gene66985:intron | 20.0% |
| !!! | AGAAATGTAATTTTAATCCA+GGG | + | chr6.4:3751825-3751844 | None:intergenic | 20.0% |
| !!! | CTTTATTTATTGGATTTAAG+AGG | - | chr6.4:3747756-3747775 | MS.gene66985:intron | 20.0% |
| !!! | TATTTTTGTTAATAGGTTGA+AGG | - | chr6.4:3749945-3749964 | MS.gene66985:intron | 20.0% |
| !!! | TTGACCAAATTGAATTTTTT+GGG | - | chr6.4:3749351-3749370 | MS.gene66985:intron | 20.0% |
| !!! | TTTTTGTGCAATATACATTT+TGG | - | chr6.4:3750896-3750915 | MS.gene66985:intron | 20.0% |
| ! | AAAAAATCAGCACAGTTTAT+TGG | - | chr6.4:3748486-3748505 | MS.gene66985:intron | 25.0% |
| ! | AAAAACCAGGAATGTTATTA+AGG | + | chr6.4:3752074-3752093 | None:intergenic | 25.0% |
| ! | AACAAATTTGTGTTCAAGTA+TGG | - | chr6.4:3750553-3750572 | MS.gene66985:intron | 25.0% |
| ! | AACCATAGATCAGATTTAAT+GGG | - | chr6.4:3748169-3748188 | MS.gene66985:intron | 25.0% |
| ! | AACTTAAAAACAGAGCAAAA+CGG | + | chr6.4:3751724-3751743 | None:intergenic | 25.0% |
| ! | ACAAATTTGTGTTCAAGTAT+GGG | - | chr6.4:3750554-3750573 | MS.gene66985:intron | 25.0% |
| ! | ACCATAAATGAATCAATTCA+GGG | + | chr6.4:3750467-3750486 | None:intergenic | 25.0% |
| ! | ATACTCGAATATTCTATCAT+TGG | + | chr6.4:3750326-3750345 | None:intergenic | 25.0% |
| ! | ATTAGCATATATATGATGCA+TGG | + | chr6.4:3750961-3750980 | None:intergenic | 25.0% |
| ! | ATTATATATGGGATTTAAGG+GGG | - | chr6.4:3747917-3747936 | MS.gene66985:intron | 25.0% |
| ! | CTTTATATATGGGATTTAAG+TGG | - | chr6.4:3747592-3747611 | MS.gene66985:CDS | 25.0% |
| ! | GCCATATGAATATATAAATC+AGG | + | chr6.4:3750491-3750510 | None:intergenic | 25.0% |
| ! | GCCTGATTTATATATTCATA+TGG | - | chr6.4:3750487-3750506 | MS.gene66985:intron | 25.0% |
| ! | GGTGAAGAAATTAAGATTTA+GGG | - | chr6.4:3748977-3748996 | MS.gene66985:intron | 25.0% |
| ! | GTATTTACTTGTCAAATCAT+CGG | + | chr6.4:3747822-3747841 | None:intergenic | 25.0% |
| ! | TAACCATAGATCAGATTTAA+TGG | - | chr6.4:3748168-3748187 | MS.gene66985:intron | 25.0% |
| ! | TAATAACTCCAACAATACAT+TGG | + | chr6.4:3751010-3751029 | None:intergenic | 25.0% |
| ! | TGGTGAAGAAATTAAGATTT+AGG | - | chr6.4:3748976-3748995 | MS.gene66985:intron | 25.0% |
| ! | TGGTTAAAGCAATTACAAAA+TGG | + | chr6.4:3748154-3748173 | None:intergenic | 25.0% |
| ! | TGTCAATGAGTTAATTAAGT+CGG | + | chr6.4:3749314-3749333 | None:intergenic | 25.0% |
| ! | TTAGAACTTGTATATGTGAT+AGG | - | chr6.4:3747949-3747968 | MS.gene66985:intron | 25.0% |
| ! | TTCACTGTATAATATGTACT+AGG | - | chr6.4:3751380-3751399 | MS.gene66985:intron | 25.0% |
| ! | TTGATTTAATCTGATGTGTT+GGG | - | chr6.4:3748280-3748299 | MS.gene66985:intron | 25.0% |
| !! | AAAGTCTGCCTTAATATTTT+GGG | - | chr6.4:3748906-3748925 | MS.gene66985:intron | 25.0% |
| !! | ACATTTCTGTTGTTTATTGT+TGG | - | chr6.4:3751837-3751856 | MS.gene66985:intron | 25.0% |
| !! | AGTGATTAAGTTCAAAGTTT+TGG | - | chr6.4:3748554-3748573 | MS.gene66985:intron | 25.0% |
| !! | ATGGATTATACGATTCAAAA+AGG | - | chr6.4:3750234-3750253 | MS.gene66985:intron | 25.0% |
| !! | CATTAATTTTAAACGTCTTC+TGG | - | chr6.4:3751153-3751172 | MS.gene66985:intron | 25.0% |
| !! | CATTTCTGTTGTTTATTGTT+GGG | - | chr6.4:3751838-3751857 | MS.gene66985:intron | 25.0% |
| !! | GTGATTAAGTTCAAAGTTTT+GGG | - | chr6.4:3748555-3748574 | MS.gene66985:intron | 25.0% |
| !! | GTTTAAAATTAATGAAGACC+AGG | + | chr6.4:3751147-3751166 | None:intergenic | 25.0% |
| !! | TAGTTTTTATATTTCCTGTG+TGG | - | chr6.4:3751580-3751599 | MS.gene66985:intron | 25.0% |
| !! | TATTTGAAATCCTTGTCTAT+AGG | - | chr6.4:3750343-3750362 | MS.gene66985:intron | 25.0% |
| !! | TTTGATTTAATCTGATGTGT+TGG | - | chr6.4:3748279-3748298 | MS.gene66985:intron | 25.0% |
| !!! | AATAGTCTATTTCTAAACTG+AGG | + | chr6.4:3751425-3751444 | None:intergenic | 25.0% |
| !!! | ATGTGCTTTTTGTGTATAAA+GGG | - | chr6.4:3749265-3749284 | MS.gene66985:intron | 25.0% |
| !!! | CAGAAATGTAATTTTAATCC+AGG | + | chr6.4:3751826-3751845 | None:intergenic | 25.0% |
| !!! | CTTAGTGAATTTTGTCATTT+TGG | - | chr6.4:3749720-3749739 | MS.gene66985:CDS | 25.0% |
| !!! | GTTGACCAAATTGAATTTTT+TGG | - | chr6.4:3749350-3749369 | MS.gene66985:intron | 25.0% |
| !!! | TTAATAGGTTGAAGGATTTT+GGG | - | chr6.4:3749953-3749972 | MS.gene66985:intron | 25.0% |
| !!! | TTTTGGTTGATTTATTGTGT+TGG | - | chr6.4:3749737-3749756 | MS.gene66985:CDS | 25.0% |
| AAAAGGAAAGAAAACTGTCA+TGG | - | chr6.4:3751633-3751652 | MS.gene66985:intron | 30.0% | |
| AACAACTTCTAACTGCTTAT+TGG | - | chr6.4:3751543-3751562 | MS.gene66985:intron | 30.0% | |
| AAGGTAACAATCAACTTCAA+AGG | + | chr6.4:3749086-3749105 | None:intergenic | 30.0% | |
| AATCAACTTCAAAGGTCAAA+TGG | + | chr6.4:3749078-3749097 | None:intergenic | 30.0% | |
| AATTCGAAATCAATCATACG+AGG | - | chr6.4:3749814-3749833 | MS.gene66985:intron | 30.0% | |
| ACCATAGATCAGATTTAATG+GGG | - | chr6.4:3748170-3748189 | MS.gene66985:intron | 30.0% | |
| AGATGTTTGATGTATTGTGT+TGG | - | chr6.4:3749872-3749891 | MS.gene66985:intron | 30.0% | |
| ATACGTATACGATATTTGAG+TGG | - | chr6.4:3749158-3749177 | MS.gene66985:intron | 30.0% | |
| ATTAACTCATTGACATGTTG+AGG | - | chr6.4:3749319-3749338 | MS.gene66985:CDS | 30.0% | |
| ATTGTGTTCAGTTTCAGTTA+TGG | + | chr6.4:3750398-3750417 | None:intergenic | 30.0% | |
| ATTTATGAGTTGTTCTGTTC+TGG | - | chr6.4:3750114-3750133 | MS.gene66985:intron | 30.0% | |
| CAAAATATTAAGGCAGACTT+TGG | + | chr6.4:3748907-3748926 | None:intergenic | 30.0% | |
| CAAATTTGTGTTCAAGTATG+GGG | - | chr6.4:3750555-3750574 | MS.gene66985:intron | 30.0% | |
| CACCATAAATGAATCAATTC+AGG | + | chr6.4:3750468-3750487 | None:intergenic | 30.0% | |
| CGGTGAAGAAATTAAGATTT+AGG | - | chr6.4:3749457-3749476 | MS.gene66985:intron | 30.0% | |
| CTATGATATTTGATGTGTTG+GGG | - | chr6.4:3748026-3748045 | MS.gene66985:intron | 30.0% | |
| CTTTGTGTGAAAAGAAAGTT+CGG | - | chr6.4:3748622-3748641 | MS.gene66985:intron | 30.0% | |
| GAAGATTGTTGAATTCAGTA+CGG | - | chr6.4:3749847-3749866 | MS.gene66985:intron | 30.0% | |
| GCAACCCAAAAAATTCAATT+TGG | + | chr6.4:3749358-3749377 | None:intergenic | 30.0% | |
| GCTATGATATTTGATGTGTT+GGG | - | chr6.4:3748025-3748044 | MS.gene66985:intron | 30.0% | |
| GTACTTGCATAACAAATCTT+CGG | + | chr6.4:3747982-3748001 | None:intergenic | 30.0% | |
| GTCAATGCTTGAATAGTATT+GGG | - | chr6.4:3749660-3749679 | MS.gene66985:intron | 30.0% | |
| TACGTATACGATATTTGAGT+GGG | - | chr6.4:3749159-3749178 | MS.gene66985:intron | 30.0% | |
| TATGTGAACCTTATGTTAAC+TGG | - | chr6.4:3750725-3750744 | MS.gene66985:intron | 30.0% | |
| TATGTTAACTTCCAAAGAGT+CGG | + | chr6.4:3751612-3751631 | None:intergenic | 30.0% | |
| TCAGTAAAAAAAAAGTTGCC+TGG | - | chr6.4:3751126-3751145 | MS.gene66985:intron | 30.0% | |
| TGAACTCACTAATGACTAAA+CGG | + | chr6.4:3751364-3751383 | None:intergenic | 30.0% | |
| TGATGTATTGTGTTGGATTT+AGG | - | chr6.4:3749879-3749898 | MS.gene66985:intron | 30.0% | |
| TGATTTAATCTGATGTGTTG+GGG | - | chr6.4:3748281-3748300 | MS.gene66985:intron | 30.0% | |
| TGCTATGATATTTGATGTGT+TGG | - | chr6.4:3748024-3748043 | MS.gene66985:intron | 30.0% | |
| TGGCTTATGTTTCAATTTCA+TGG | - | chr6.4:3750083-3750102 | MS.gene66985:intron | 30.0% | |
| TGTAATGAAGAACCTTAAGA+GGG | + | chr6.4:3747478-3747497 | None:intergenic | 30.0% | |
| TGTCAATGCTTGAATAGTAT+TGG | - | chr6.4:3749659-3749678 | MS.gene66985:intron | 30.0% | |
| TGTTATCACCATAATCCAAT+TGG | + | chr6.4:3751916-3751935 | None:intergenic | 30.0% | |
| TTATATATGGGATTTAAGGG+GGG | - | chr6.4:3747918-3747937 | MS.gene66985:intron | 30.0% | |
| TTGAAAAGATGCAAATCTGT+TGG | + | chr6.4:3750020-3750039 | None:intergenic | 30.0% | |
| TTGCGATTTAATGACCAAAT+TGG | - | chr6.4:3748851-3748870 | MS.gene66985:intron | 30.0% | |
| TTGTAATGAAGAACCTTAAG+AGG | + | chr6.4:3747479-3747498 | None:intergenic | 30.0% | |
| TTTAGATCAACAAAATCACG+TGG | + | chr6.4:3751699-3751718 | None:intergenic | 30.0% | |
| TTTGTAATATTGCCAAATGC+AGG | - | chr6.4:3751871-3751890 | MS.gene66985:intron | 30.0% | |
| ! | AAGGTCAAATGGAAAGATTT+TGG | + | chr6.4:3749067-3749086 | None:intergenic | 30.0% |
| ! | AAGGTCAAATTGCAAGATTT+TGG | + | chr6.4:3749540-3749559 | None:intergenic | 30.0% |
| ! | AATGACCAAATTGGATGTTT+TGG | - | chr6.4:3748860-3748879 | MS.gene66985:intron | 30.0% |
| ! | AGGAACATTTTTGATGTGTT+GGG | - | chr6.4:3747860-3747879 | MS.gene66985:intron | 30.0% |
| ! | AGGTCAAATGGAAAGATTTT+GGG | + | chr6.4:3749066-3749085 | None:intergenic | 30.0% |
| ! | AGGTCAAATTGCAAGATTTT+GGG | + | chr6.4:3749539-3749558 | None:intergenic | 30.0% |
| ! | AGTGTTCTAAACAAATGAGA+GGG | + | chr6.4:3751499-3751518 | None:intergenic | 30.0% |
| ! | ATCAGAGCAAATTTGTGTTT+TGG | - | chr6.4:3749771-3749790 | MS.gene66985:intron | 30.0% |
| ! | ATGACCAAATTGGATGTTTT+GGG | - | chr6.4:3748861-3748880 | MS.gene66985:intron | 30.0% |
| ! | CAAAGTCTGCCTTAATATTT+TGG | - | chr6.4:3748905-3748924 | MS.gene66985:intron | 30.0% |
| ! | CTTGTCCATTTAAAACAGTT+GGG | - | chr6.4:3751045-3751064 | MS.gene66985:intron | 30.0% |
| ! | GATTTGCATCTTTTCAAAGA+AGG | - | chr6.4:3750023-3750042 | MS.gene66985:intron | 30.0% |
| ! | GGGGTAATAATTTGAGATAA+TGG | + | chr6.4:3748776-3748795 | None:intergenic | 30.0% |
| ! | GTCTTCAACAAGTCTATTTT+TGG | - | chr6.4:3750854-3750873 | MS.gene66985:intron | 30.0% |
| ! | GTTGGGAAAATGTTTTTCTA+TGG | + | chr6.4:3750831-3750850 | None:intergenic | 30.0% |
| ! | TATGATTGATTTCGAATTCC+AGG | + | chr6.4:3749812-3749831 | None:intergenic | 30.0% |
| ! | TCCCTGAATTGATTCATTTA+TGG | - | chr6.4:3750463-3750482 | MS.gene66985:intron | 30.0% |
| ! | TGTGCAATATACATTTTGGA+AGG | - | chr6.4:3750900-3750919 | MS.gene66985:intron | 30.0% |
| ! | TTTGAAGTTGATTGTTACCT+TGG | - | chr6.4:3749085-3749104 | MS.gene66985:intron | 30.0% |
| ! | TTTTCAGAAACTGCTTAAAG+AGG | + | chr6.4:3750603-3750622 | None:intergenic | 30.0% |
| !! | ACTCGCAATTTTGACAAAAA+TGG | + | chr6.4:3751244-3751263 | None:intergenic | 30.0% |
| !! | AGTGATATGTTTGCTGTATT+GGG | - | chr6.4:3749594-3749613 | MS.gene66985:intron | 30.0% |
| !! | GATGTGCTTTTTGTGTATAA+AGG | - | chr6.4:3749264-3749283 | MS.gene66985:intron | 30.0% |
| !! | GTGCAATATACATTTTGGAA+GGG | - | chr6.4:3750901-3750920 | MS.gene66985:intron | 30.0% |
| !! | GTTAATAGGTTGAAGGATTT+TGG | - | chr6.4:3749952-3749971 | MS.gene66985:intron | 30.0% |
| AAAAGCAGCCAATGTATTGT+TGG | - | chr6.4:3750999-3751018 | MS.gene66985:intron | 35.0% | |
| AAAATTGCGAGTAACCTCAT+TGG | - | chr6.4:3751252-3751271 | MS.gene66985:intron | 35.0% | |
| AAGAAGGAATTCGTCCTTTA+TGG | - | chr6.4:3750039-3750058 | MS.gene66985:intron | 35.0% | |
| AATAACTCATTGACATGGTG+AGG | - | chr6.4:3748523-3748542 | MS.gene66985:intron | 35.0% | |
| AATCAGAGGAATCGACAATT+TGG | + | chr6.4:3747397-3747416 | None:intergenic | 35.0% | |
| AATTATTACCCCTGTTAGTG+TGG | - | chr6.4:3748784-3748803 | MS.gene66985:intron | 35.0% | |
| ACAACCCAAAACATCCAATT+TGG | + | chr6.4:3748868-3748887 | None:intergenic | 35.0% | |
| ACAAGTAAATACAGCTCAGT+TGG | - | chr6.4:3747830-3747849 | MS.gene66985:intron | 35.0% | |
| ACATTTCAGACCTATAGACA+AGG | + | chr6.4:3750356-3750375 | None:intergenic | 35.0% | |
| ACCAACTAAGCTCTACTTAA+GGG | + | chr6.4:3748246-3748265 | None:intergenic | 35.0% | |
| ACCCACAACCCAAAATATTA+AGG | + | chr6.4:3748917-3748936 | None:intergenic | 35.0% | |
| ACCCCATTAAATCTGATCTA+TGG | + | chr6.4:3748174-3748193 | None:intergenic | 35.0% | |
| AGAAGGAATTCGTCCTTTAT+GGG | - | chr6.4:3750040-3750059 | MS.gene66985:intron | 35.0% | |
| AGAGATTCCAAACGGTAATT+TGG | + | chr6.4:3751770-3751789 | None:intergenic | 35.0% | |
| AGGTAGATACTTTATGGCTT+TGG | - | chr6.4:3750063-3750082 | MS.gene66985:intron | 35.0% | |
| ATATAACGCACACACGTATA+GGG | + | chr6.4:3752033-3752052 | None:intergenic | 35.0% | |
| ATCACGTGGAAACCAAATAA+AGG | + | chr6.4:3751685-3751704 | None:intergenic | 35.0% | |
| ATTCATCTTACAGGAACACT+TGG | - | chr6.4:3752198-3752217 | MS.gene66985:CDS | 35.0% | |
| ATTTGAACCTGTTGATGTGA+TGG | - | chr6.4:3747624-3747643 | MS.gene66985:CDS | 35.0% | |
| CATTCATAGCAGCTAAAATG+TGG | + | chr6.4:3749245-3749264 | None:intergenic | 35.0% | |
| GACTATTCTACTCGATGTAT+AGG | - | chr6.4:3751438-3751457 | MS.gene66985:intron | 35.0% | |
| GATTATGGTGATAACATCTG+TGG | - | chr6.4:3751920-3751939 | MS.gene66985:intron | 35.0% | |
| GCACATCATCACACAAAAAA+TGG | + | chr6.4:3748601-3748620 | None:intergenic | 35.0% | |
| GTGAAGAGGAAATATTTGCA+TGG | + | chr6.4:3751208-3751227 | None:intergenic | 35.0% | |
| GTTTACATCATGTAGTGAAG+AGG | + | chr6.4:3751222-3751241 | None:intergenic | 35.0% | |
| TACCAACTAAGCTCTACTTA+AGG | + | chr6.4:3748247-3748266 | None:intergenic | 35.0% | |
| TAGCAGAGTCCTTCAAAAAA+AGG | + | chr6.4:3750198-3750217 | None:intergenic | 35.0% | |
| TATATAACGCACACACGTAT+AGG | + | chr6.4:3752034-3752053 | None:intergenic | 35.0% | |
| TATGGGAGGTAGATACTTTA+TGG | - | chr6.4:3750057-3750076 | MS.gene66985:intron | 35.0% | |
| TCAACGATCAACACAGATAA+AGG | + | chr6.4:3750761-3750780 | None:intergenic | 35.0% | |
| TGCATGAAATGTGTTAGACT+AGG | - | chr6.4:3748714-3748733 | MS.gene66985:intron | 35.0% | |
| TGGTGAAAGAAACTACAGAA+TGG | + | chr6.4:3748411-3748430 | None:intergenic | 35.0% | |
| TGTGAAAAGAAAGTTCGGTA+CGG | - | chr6.4:3748627-3748646 | MS.gene66985:intron | 35.0% | |
| TTATGCAAGTACAACTCAGT+TGG | - | chr6.4:3747990-3748009 | MS.gene66985:intron | 35.0% | |
| TTATGTTAACTGGAACAGCA+AGG | - | chr6.4:3750735-3750754 | MS.gene66985:intron | 35.0% | |
| TTTGAACCTGTTGATGTGAT+GGG | - | chr6.4:3747625-3747644 | MS.gene66985:CDS | 35.0% | |
| TTTGACGTTGTAAGAATCAG+AGG | + | chr6.4:3747411-3747430 | None:intergenic | 35.0% | |
| ! | AAAGTATCTACCTCCCATAA+AGG | + | chr6.4:3750056-3750075 | None:intergenic | 35.0% |
| ! | AACATAGTGCTCTTTGAAGA+CGG | - | chr6.4:3749437-3749456 | MS.gene66985:intron | 35.0% |
| ! | AACTTAGTGCTCTTTGAAGA+TGG | - | chr6.4:3748956-3748975 | MS.gene66985:intron | 35.0% |
| ! | AATGCTTGAATAGTATTGGG+TGG | - | chr6.4:3749663-3749682 | MS.gene66985:intron | 35.0% |
| ! | ACACAAATTTGCTCTGATCA+AGG | + | chr6.4:3749769-3749788 | None:intergenic | 35.0% |
| ! | AGGGACATTTTTGATGTGTT+GGG | - | chr6.4:3747696-3747715 | MS.gene66985:intron | 35.0% |
| ! | ATGCATGGATTAAAGATGCA+CGG | + | chr6.4:3750946-3750965 | None:intergenic | 35.0% |
| ! | ATTTTTGATGTGTTGGGACT+TGG | - | chr6.4:3747866-3747885 | MS.gene66985:intron | 35.0% |
| ! | CAGGAACATTTTTGATGTGT+TGG | - | chr6.4:3747859-3747878 | MS.gene66985:intron | 35.0% |
| ! | CAGTGTTCTAAACAAATGAG+AGG | + | chr6.4:3751500-3751519 | None:intergenic | 35.0% |
| ! | CCTTGTCCATTTAAAACAGT+TGG | - | chr6.4:3751044-3751063 | MS.gene66985:intron | 35.0% |
| ! | TAGGGACATTTTTGATGTGT+TGG | - | chr6.4:3747695-3747714 | MS.gene66985:intron | 35.0% |
| ! | TCAAATTGCAAGATTTTGGG+AGG | + | chr6.4:3749536-3749555 | None:intergenic | 35.0% |
| ! | TCCATTTAAAACAGTTGGGA+TGG | - | chr6.4:3751049-3751068 | MS.gene66985:intron | 35.0% |
| ! | TTATCTGTGTTGATCGTTGA+AGG | - | chr6.4:3750761-3750780 | MS.gene66985:intron | 35.0% |
| ! | TTGCTGTTCCAGTTAACATA+AGG | + | chr6.4:3750736-3750755 | None:intergenic | 35.0% |
| ! | TTTAAAACAGTTGGGATGGT+TGG | - | chr6.4:3751053-3751072 | MS.gene66985:intron | 35.0% |
| ! | TTTTTGATGTGTTGGGACTT+GGG | - | chr6.4:3747867-3747886 | MS.gene66985:intron | 35.0% |
| !! | ACCATCCCAACTGTTTTAAA+TGG | + | chr6.4:3751053-3751072 | None:intergenic | 35.0% |
| !! | ATGAATCAGTTGGTAACTGT+AGG | - | chr6.4:3747676-3747695 | MS.gene66985:intron | 35.0% |
| !! | CCAACTGTTTTAAATGGACA+AGG | + | chr6.4:3751047-3751066 | None:intergenic | 35.0% |
| !! | GACAATTTGGTGAGTGTTTT+CGG | + | chr6.4:3747384-3747403 | None:intergenic | 35.0% |
| !! | GAGTGATATGTTTGCTGTAT+TGG | - | chr6.4:3749593-3749612 | MS.gene66985:intron | 35.0% |
| !! | GATTTAGGGTTGTTTTGTTG+AGG | - | chr6.4:3749472-3749491 | MS.gene66985:intron | 35.0% |
| !! | TGAATCAGTTGGTAACTGTA+GGG | - | chr6.4:3747677-3747696 | MS.gene66985:intron | 35.0% |
| !! | TGTTTTAAATGGACAAGGAG+CGG | + | chr6.4:3751042-3751061 | None:intergenic | 35.0% |
| !!! | AAATTGGATGTTTTGGGTTG+TGG | - | chr6.4:3748867-3748886 | MS.gene66985:intron | 35.0% |
| !!! | AATTGGATGTTTTGGGTTGT+GGG | - | chr6.4:3748868-3748887 | MS.gene66985:intron | 35.0% |
| !!! | GCCTTAATATTTTGGGTTGT+GGG | - | chr6.4:3748913-3748932 | MS.gene66985:intron | 35.0% |
| !!! | GCTGTTTTTGACTTTTGTTG+AGG | - | chr6.4:3748999-3749018 | MS.gene66985:intron | 35.0% |
| !!! | TACTGTGAGCCTTTTTTTGA+AGG | - | chr6.4:3750186-3750205 | MS.gene66985:intron | 35.0% |
| !!! | TGCCTTAATATTTTGGGTTG+TGG | - | chr6.4:3748912-3748931 | MS.gene66985:intron | 35.0% |
| ACACCTTAATCGTGGATAAG+TGG | + | chr6.4:3748330-3748349 | None:intergenic | 40.0% | |
| ACCTTAATCGTGGATAAGTG+GGG | + | chr6.4:3748328-3748347 | None:intergenic | 40.0% | |
| ACCTTACGTGTGAATAAGTC+GGG | + | chr6.4:3748073-3748092 | None:intergenic | 40.0% | |
| ACTAAGCATTCGATTCAACG+AGG | - | chr6.4:3751949-3751968 | MS.gene66985:intron | 40.0% | |
| AGAATCACACACCTTAATCG+TGG | + | chr6.4:3748338-3748357 | None:intergenic | 40.0% | |
| AGATGCAAATCTGTTGGAAC+AGG | + | chr6.4:3750014-3750033 | None:intergenic | 40.0% | |
| AGGGATACAGCAAAGTTTAG+TGG | - | chr6.4:3749284-3749303 | MS.gene66985:CDS | 40.0% | |
| ATACAGACACCACACTAACA+GGG | + | chr6.4:3748796-3748815 | None:intergenic | 40.0% | |
| ATGTCTCTCTCTCATCTTGT+TGG | - | chr6.4:3749689-3749708 | MS.gene66985:intron | 40.0% | |
| ATTTGTGTTCAAGTATGGGG+TGG | - | chr6.4:3750558-3750577 | MS.gene66985:intron | 40.0% | |
| CAAATCTGTTGGAACAGGTA+AGG | + | chr6.4:3750009-3750028 | None:intergenic | 40.0% | |
| CAAGCAAGAGAGATTCCAAA+CGG | + | chr6.4:3751778-3751797 | None:intergenic | 40.0% | |
| CACCTTAATCGTGGATAAGT+GGG | + | chr6.4:3748329-3748348 | None:intergenic | 40.0% | |
| CACCTTACGTGTGAATAAGT+CGG | + | chr6.4:3748074-3748093 | None:intergenic | 40.0% | |
| CACTAATTCAACAGGCAGAA+GGG | + | chr6.4:3751302-3751321 | None:intergenic | 40.0% | |
| CAGAAACTGCTTAAAGAGGA+GGG | + | chr6.4:3750599-3750618 | None:intergenic | 40.0% | |
| CCAGGAATGTTATTAAGGAC+AGG | + | chr6.4:3752069-3752088 | None:intergenic | 40.0% | |
| CCTGTCCTTAATAACATTCC+TGG | - | chr6.4:3752066-3752085 | MS.gene66985:intron | 40.0% | |
| GAAAGTTCGGTACGGTTTAT+TGG | - | chr6.4:3748635-3748654 | MS.gene66985:intron | 40.0% | |
| GGGATACAGCAAAGTTTAGT+GGG | - | chr6.4:3749285-3749304 | MS.gene66985:CDS | 40.0% | |
| GGTGTGTGATTCTTGTAACT+AGG | - | chr6.4:3748345-3748364 | MS.gene66985:intron | 40.0% | |
| GTATGATTGCATGACCAATG+AGG | + | chr6.4:3751269-3751288 | None:intergenic | 40.0% | |
| GTTGATCGTTGAAGGTTTGT+GGG | - | chr6.4:3750769-3750788 | MS.gene66985:intron | 40.0% | |
| TATGAGTTGTTCTGTTCTGG+AGG | - | chr6.4:3750117-3750136 | MS.gene66985:intron | 40.0% | |
| TATGGCATTTCATAGTGCAC+TGG | - | chr6.4:3750505-3750524 | MS.gene66985:intron | 40.0% | |
| TCAGAAACTGCTTAAAGAGG+AGG | + | chr6.4:3750600-3750619 | None:intergenic | 40.0% | |
| TCCCTTAAGTAGAGCTTAGT+TGG | - | chr6.4:3748242-3748261 | MS.gene66985:intron | 40.0% | |
| TCTATTCCCATCACATCAAC+AGG | + | chr6.4:3747634-3747653 | None:intergenic | 40.0% | |
| TGCCTGTTGAATTAGTGCTT+AGG | - | chr6.4:3751305-3751324 | MS.gene66985:intron | 40.0% | |
| TGCGAGACAATTCATCTTAC+AGG | - | chr6.4:3752189-3752208 | MS.gene66985:CDS | 40.0% | |
| TGTCTCTCTCTCATCTTGTT+GGG | - | chr6.4:3749690-3749709 | MS.gene66985:intron | 40.0% | |
| TGTCTGTATCTATGCTTCAC+AGG | - | chr6.4:3748807-3748826 | MS.gene66985:intron | 40.0% | |
| TGTTGATCGTTGAAGGTTTG+TGG | - | chr6.4:3750768-3750787 | MS.gene66985:intron | 40.0% | |
| TTCACGAGATTGTCGTTCTT+CGG | + | chr6.4:3747438-3747457 | None:intergenic | 40.0% | |
| TTGATCGTTGAAGGTTTGTG+GGG | - | chr6.4:3750770-3750789 | MS.gene66985:intron | 40.0% | |
| ! | AAGGGACTTCAAGGTTCTTT+TGG | - | chr6.4:3750919-3750938 | MS.gene66985:intron | 40.0% |
| ! | AGGGACTTCAAGGTTCTTTT+GGG | - | chr6.4:3750920-3750939 | MS.gene66985:intron | 40.0% |
| ! | ATGAGTTGTTCTGTTCTGGA+GGG | - | chr6.4:3750118-3750137 | MS.gene66985:intron | 40.0% |
| ! | CTAACTGCAATGGTGGAAAA+TGG | - | chr6.4:3750215-3750234 | MS.gene66985:intron | 40.0% |
| ! | GACATTTTTGATGTGTTGGG+GGG | - | chr6.4:3747699-3747718 | MS.gene66985:intron | 40.0% |
| ! | GCATCGACACTTCAAATTGA+AGG | - | chr6.4:3748682-3748701 | MS.gene66985:intron | 40.0% |
| ! | GGACATTTTTGATGTGTTGG+GGG | - | chr6.4:3747698-3747717 | MS.gene66985:intron | 40.0% |
| ! | GGGACATTTTTGATGTGTTG+GGG | - | chr6.4:3747697-3747716 | MS.gene66985:intron | 40.0% |
| !! | ACATTTTGGAAGGGACTTCA+AGG | - | chr6.4:3750910-3750929 | MS.gene66985:intron | 40.0% |
| !! | AGACTTGTTGAAGACAGTGT+TGG | + | chr6.4:3750849-3750868 | None:intergenic | 40.0% |
| !! | AGTACAACTCAGTTGGTAGT+TGG | - | chr6.4:3747997-3748016 | MS.gene66985:intron | 40.0% |
| !! | ATAGTGCACTGGTTTGATGT+TGG | - | chr6.4:3750516-3750535 | MS.gene66985:intron | 40.0% |
| !! | GACTTGTTGAAGACAGTGTT+GGG | + | chr6.4:3750848-3750867 | None:intergenic | 40.0% |
| !! | GTTTTAAATGGACAAGGAGC+GGG | + | chr6.4:3751041-3751060 | None:intergenic | 40.0% |
| !!! | AAGTTCAAAGTTTTGGGCTG+TGG | - | chr6.4:3748561-3748580 | MS.gene66985:intron | 40.0% |
| !!! | AGTTCAAAGTTTTGGGCTGT+GGG | - | chr6.4:3748562-3748581 | MS.gene66985:intron | 40.0% |
| !!! | TTGTGTTTTGGTACACTCGT+CGG | - | chr6.4:3749783-3749802 | MS.gene66985:intron | 40.0% |
| AAGGACTCTGCTAACTGCAA+TGG | - | chr6.4:3750205-3750224 | MS.gene66985:intron | 45.0% | |
| AATGCCTCTGATCATCAGGT+TGG | - | chr6.4:3751995-3752014 | MS.gene66985:intron | 45.0% | |
| ACGAGCTGTCATGAATCAGT+TGG | - | chr6.4:3747666-3747685 | MS.gene66985:intron | 45.0% | |
| AGGAATTCGTCCTTTATGGG+AGG | - | chr6.4:3750043-3750062 | MS.gene66985:intron | 45.0% | |
| CAATCTCGTGAACTCAAAGC+TGG | - | chr6.4:3747446-3747465 | MS.gene66985:intron | 45.0% | |
| CGATTCAAAAAGGCTGTCTC+AGG | - | chr6.4:3750244-3750263 | MS.gene66985:intron | 45.0% | |
| CGATTTCATCATCTATGCCC+TGG | - | chr6.4:3751805-3751824 | MS.gene66985:intron | 45.0% | |
| CTCTCTCATCTTGTTGGGAA+GGG | - | chr6.4:3749695-3749714 | MS.gene66985:CDS | 45.0% | |
| GATACAGACACCACACTAAC+AGG | + | chr6.4:3748797-3748816 | None:intergenic | 45.0% | |
| GCAACTACATGTGTCAGTGT+TGG | + | chr6.4:3748743-3748762 | None:intergenic | 45.0% | |
| GCACTAATTCAACAGGCAGA+AGG | + | chr6.4:3751303-3751322 | None:intergenic | 45.0% | |
| GGATCAGCCAAATTACCGTT+TGG | - | chr6.4:3751760-3751779 | MS.gene66985:intron | 45.0% | |
| GGGGTCTGAGTTCGAATATT+TGG | - | chr6.4:3748045-3748064 | MS.gene66985:intron | 45.0% | |
| GTGGGTGACCAATTGGATTA+TGG | - | chr6.4:3751905-3751924 | MS.gene66985:intron | 45.0% | |
| GTTGGAACAGGTAAGGAAGA+AGG | + | chr6.4:3750002-3750021 | None:intergenic | 45.0% | |
| TACAGACACCACACTAACAG+GGG | + | chr6.4:3748795-3748814 | None:intergenic | 45.0% | |
| TACAGGAACACTTGGTTGAG+AGG | - | chr6.4:3752206-3752225 | MS.gene66985:CDS | 45.0% | |
| TACTCCATAACATAGCCGTG+AGG | + | chr6.4:3752149-3752168 | None:intergenic | 45.0% | |
| TCCCCACTTATCCACGATTA+AGG | - | chr6.4:3748324-3748343 | MS.gene66985:intron | 45.0% | |
| TCCCGACTTATTCACACGTA+AGG | - | chr6.4:3748069-3748088 | MS.gene66985:intron | 45.0% | |
| TCTCTCTCATCTTGTTGGGA+AGG | - | chr6.4:3749694-3749713 | MS.gene66985:CDS | 45.0% | |
| TGGGACTTGGGTTCGAATTT+GGG | - | chr6.4:3747879-3747898 | MS.gene66985:intron | 45.0% | |
| TGGGGTGGTGAAAAGTTTGA+AGG | - | chr6.4:3750573-3750592 | MS.gene66985:intron | 45.0% | |
| TTGGGACTTGGGTTCGAATT+TGG | - | chr6.4:3747878-3747897 | MS.gene66985:intron | 45.0% | |
| ! | CGTTTGGAATCTCTCTTGCT+TGG | - | chr6.4:3751776-3751795 | MS.gene66985:intron | 45.0% |
| ! | GTTTTTCACGCAGGCTGTAA+TGG | - | chr6.4:3752088-3752107 | MS.gene66985:CDS | 45.0% |
| ! | TTTTTGATGTGTTGGGGGGT+CGG | - | chr6.4:3747703-3747722 | MS.gene66985:intron | 45.0% |
| !! | ACATTCCTGGTTTTTCACGC+AGG | - | chr6.4:3752079-3752098 | MS.gene66985:CDS | 45.0% |
| !! | TGTGGATAATGCCGACTCTT+TGG | - | chr6.4:3751598-3751617 | MS.gene66985:intron | 45.0% |
| !!! | TGTGTTTTGGTACACTCGTC+GGG | - | chr6.4:3749784-3749803 | MS.gene66985:intron | 45.0% |
| !! | AAAAAAAAAAAAAAAAATTC+TGG | - | chr6.4:3748375-3748394 | MS.gene66985:intron | 5.0% |
| !! | AAAACAAATTAATAATAATT+AGG | + | chr6.4:3747505-3747524 | None:intergenic | 5.0% |
| !! | AAACAAATTAATAATAATTA+GGG | + | chr6.4:3747504-3747523 | None:intergenic | 5.0% |
| AATCTGATGTGTTGGGGCCT+GGG | - | chr6.4:3748287-3748306 | MS.gene66985:intron | 50.0% | |
| ACGAGGACATAGTGAGTGTC+TGG | - | chr6.4:3751966-3751985 | MS.gene66985:intron | 50.0% | |
| AGAGTCGGCATTATCCACAC+AGG | + | chr6.4:3751597-3751616 | None:intergenic | 50.0% | |
| AGGAAGAAGGACGAGCAAGA+TGG | + | chr6.4:3749989-3750008 | None:intergenic | 50.0% | |
| ATCCAATTGGTCACCCACCA+AGG | + | chr6.4:3751903-3751922 | None:intergenic | 50.0% | |
| CATAGCCGTGAGGAAGCTTT+AGG | + | chr6.4:3752139-3752158 | None:intergenic | 50.0% | |
| CGTCACCTAAAGCTTCCTCA+CGG | - | chr6.4:3752131-3752150 | MS.gene66985:CDS | 50.0% | |
| GACTCTGCTAACTGCAATGG+TGG | - | chr6.4:3750208-3750227 | MS.gene66985:intron | 50.0% | |
| GATGCCAACCTGATGATCAG+AGG | + | chr6.4:3752002-3752021 | None:intergenic | 50.0% | |
| GCTTCCTCACGGCTATGTTA+TGG | - | chr6.4:3752142-3752161 | MS.gene66985:CDS | 50.0% | |
| GGTGTGCGATTCTCGATACT+AGG | - | chr6.4:3748090-3748109 | MS.gene66985:intron | 50.0% | |
| TAATCTGATGTGTTGGGGCC+TGG | - | chr6.4:3748286-3748305 | MS.gene66985:intron | 50.0% | |
| TACAGCCTGCGTGAAAAACC+AGG | + | chr6.4:3752087-3752106 | None:intergenic | 50.0% | |
| TCGCAATGCCTCTGATCATC+AGG | - | chr6.4:3751991-3752010 | MS.gene66985:intron | 50.0% | |
| ! | TTTTGATGTGTTGGGGGGTC+GGG | - | chr6.4:3747704-3747723 | MS.gene66985:intron | 50.0% |
| !! | AGAGCTTAGTTGGTAGCTGC+AGG | - | chr6.4:3748252-3748271 | MS.gene66985:intron | 50.0% |
| !! | AGCTGGTCTTCACCCTCTTA+AGG | - | chr6.4:3747463-3747482 | MS.gene66985:intron | 50.0% |
| !! | AGGCTGTCTCAGGTCGTTTT+TGG | - | chr6.4:3750254-3750273 | MS.gene66985:intron | 50.0% |
| !! | GAGCTTAGTTGGTAGCTGCA+GGG | - | chr6.4:3748253-3748272 | MS.gene66985:intron | 50.0% |
| !! | GTTCTGTTCTGGAGGGAGAA+AGG | - | chr6.4:3750125-3750144 | MS.gene66985:intron | 50.0% |
| !! | TCTCGCAGAGAAGCATCATG+CGG | + | chr6.4:3752176-3752195 | None:intergenic | 50.0% |
| !!! | AGGTCGTTTTTGGGAGGATC+TGG | - | chr6.4:3750264-3750283 | MS.gene66985:intron | 50.0% |
| !!! | GGCTGTCTCAGGTCGTTTTT+GGG | - | chr6.4:3750255-3750274 | MS.gene66985:intron | 50.0% |
| !!! | TGTCTCAGGTCGTTTTTGGG+AGG | - | chr6.4:3750258-3750277 | MS.gene66985:intron | 50.0% |
| AATGCAGGTGCTTGCCTTGG+TGG | - | chr6.4:3751886-3751905 | MS.gene66985:intron | 55.0% | |
| ATGCAGGTGCTTGCCTTGGT+GGG | - | chr6.4:3751887-3751906 | MS.gene66985:intron | 55.0% | |
| CCAAATGCAGGTGCTTGCCT+TGG | - | chr6.4:3751883-3751902 | MS.gene66985:intron | 55.0% | |
| CCAAGGCAAGCACCTGCATT+TGG | + | chr6.4:3751886-3751905 | None:intergenic | 55.0% | |
| GGAATCCCGAGTTCAAACCC+AGG | + | chr6.4:3748307-3748326 | None:intergenic | 55.0% | |
| GGGGGTCGGGGTTTGAATTT+AGG | - | chr6.4:3747717-3747736 | MS.gene66985:intron | 55.0% | |
| TTGGGGCCTGGGTTTGAACT+CGG | - | chr6.4:3748298-3748317 | MS.gene66985:intron | 55.0% | |
| TTTGATGTGTTGGGGGGTCG+GGG | - | chr6.4:3747705-3747724 | MS.gene66985:intron | 55.0% | |
| ! | TGCCTTGGTGGGTGACCAAT+TGG | - | chr6.4:3751898-3751917 | MS.gene66985:intron | 55.0% |
| !! | ACAGCTCAGTTGGTAGCTGC+AGG | - | chr6.4:3747840-3747859 | MS.gene66985:intron | 55.0% |
| TGGGGCCTGGGTTTGAACTC+GGG | - | chr6.4:3748299-3748318 | MS.gene66985:intron | 60.0% | |
| TGGTACACTCGTCGGGTACC+TGG | - | chr6.4:3749791-3749810 | MS.gene66985:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.4 | gene | 3747329 | 3752232 | 3747329 | ID=MS.gene66985 |
| chr6.4 | mRNA | 3747329 | 3752232 | 3747329 | ID=MS.gene66985.t1;Parent=MS.gene66985 |
| chr6.4 | exon | 3752077 | 3752232 | 3752077 | ID=MS.gene66985.t1.exon1;Parent=MS.gene66985.t1 |
| chr6.4 | CDS | 3752077 | 3752232 | 3752077 | ID=cds.MS.gene66985.t1;Parent=MS.gene66985.t1 |
| chr6.4 | exon | 3749693 | 3749785 | 3749693 | ID=MS.gene66985.t1.exon2;Parent=MS.gene66985.t1 |
| chr6.4 | CDS | 3749693 | 3749785 | 3749693 | ID=cds.MS.gene66985.t1;Parent=MS.gene66985.t1 |
| chr6.4 | exon | 3749497 | 3749601 | 3749497 | ID=MS.gene66985.t1.exon3;Parent=MS.gene66985.t1 |
| chr6.4 | CDS | 3749497 | 3749601 | 3749497 | ID=cds.MS.gene66985.t1;Parent=MS.gene66985.t1 |
| chr6.4 | exon | 3749276 | 3749353 | 3749276 | ID=MS.gene66985.t1.exon4;Parent=MS.gene66985.t1 |
| chr6.4 | CDS | 3749276 | 3749353 | 3749276 | ID=cds.MS.gene66985.t1;Parent=MS.gene66985.t1 |
| chr6.4 | exon | 3747549 | 3747668 | 3747549 | ID=MS.gene66985.t1.exon5;Parent=MS.gene66985.t1 |
| chr6.4 | CDS | 3747549 | 3747668 | 3747549 | ID=cds.MS.gene66985.t1;Parent=MS.gene66985.t1 |
| chr6.4 | exon | 3747329 | 3747460 | 3747329 | ID=MS.gene66985.t1.exon6;Parent=MS.gene66985.t1 |
| chr6.4 | CDS | 3747329 | 3747460 | 3747329 | ID=cds.MS.gene66985.t1;Parent=MS.gene66985.t1 |
| Gene Sequence |
| Protein sequence |
