AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene67328

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene67328.t1 MTR_2g435550 93.948 347 21 0 1 347 15 361 0.0 680
MS.gene67328.t1 MTR_2g435550 93.948 347 21 0 1 347 1 347 0.0 679
MS.gene67328.t1 MTR_2g435550 95.312 320 15 0 1 320 15 334 0.0 640
MS.gene67328.t1 MTR_4g120410 74.636 343 86 1 1 343 15 356 0.0 552
MS.gene67328.t1 MTR_7g112490 63.609 338 114 2 16 344 29 366 1.32e-164 465
MS.gene67328.t1 MTR_7g112490 63.609 338 114 2 16 344 47 384 2.45e-164 465
MS.gene67328.t1 MTR_1g083690 64.968 314 110 0 28 341 39 352 1.34e-163 461
MS.gene67328.t1 MTR_7g080170 46.313 339 155 2 28 339 46 384 5.71e-103 312
MS.gene67328.t1 MTR_4g037470 46.230 305 150 4 48 339 67 370 4.70e-99 301
MS.gene67328.t1 MTR_2g090190 47.697 304 146 4 48 339 61 363 1.72e-98 300
MS.gene67328.t1 MTR_8g017240 48.197 305 150 3 37 341 45 341 1.81e-97 294
MS.gene67328.t1 MTR_7g021530 46.505 329 152 5 44 351 54 379 8.53e-97 293
MS.gene67328.t1 MTR_7g021530 46.505 329 152 5 44 351 95 420 2.84e-96 293
MS.gene67328.t1 MTR_4g037470 44.904 314 150 5 48 339 67 379 7.45e-96 293
MS.gene67328.t1 MTR_4g013295 46.309 298 156 2 50 343 50 347 1.27e-92 281
MS.gene67328.t1 MTR_7g070510 42.342 333 173 4 34 351 48 376 3.49e-92 283
MS.gene67328.t1 MTR_7g021530 45.955 309 143 5 64 351 24 329 6.03e-87 266
MS.gene67328.t1 MTR_7g021530 47.584 269 118 4 44 291 54 320 2.51e-81 251
MS.gene67328.t1 MTR_7g021530 47.584 269 118 4 44 291 95 361 9.50e-81 251
MS.gene67328.t1 MTR_7g080170 45.652 276 123 2 91 339 1 276 8.65e-78 244
MS.gene67328.t1 MTR_1g016620 41.509 318 178 5 28 343 21 332 7.91e-75 235
MS.gene67328.t1 MTR_7g021530 39.706 204 100 4 44 226 54 255 1.84e-41 146
MS.gene67328.t1 MTR_7g021530 39.706 204 100 4 44 226 95 296 6.03e-41 146
MS.gene67328.t1 MTR_2g020970 29.429 333 180 9 44 348 45 350 6.02e-32 123
MS.gene67328.t1 MTR_4g118340 30.634 284 146 7 44 300 44 303 1.34e-30 120
MS.gene67328.t1 MTR_2g020970 29.042 334 182 9 44 349 45 351 2.32e-30 120
MS.gene67328.t1 MTR_6g087000 26.286 350 205 8 34 355 73 397 1.24e-29 120
MS.gene67328.t1 MTR_6g087000 26.286 350 205 8 34 355 73 397 1.94e-29 120
MS.gene67328.t1 MTR_5g009370 32.377 244 125 8 64 303 75 282 1.29e-25 105
MS.gene67328.t1 MTR_6g081850 31.022 274 137 9 81 339 82 318 2.90e-24 101
MS.gene67328.t1 MTR_1g115570 29.260 311 170 12 11 316 56 321 3.21e-24 102
MS.gene67328.t1 MTR_1g014640 31.276 243 128 8 74 316 104 307 3.83e-24 101
MS.gene67328.t1 MTR_1g013400 31.276 243 128 8 74 316 104 307 3.83e-24 101
MS.gene67328.t1 MTR_3g105730 30.483 269 135 11 74 339 61 280 9.47e-24 99.8
MS.gene67328.t1 MTR_3g105730 30.483 269 135 11 74 339 39 258 1.05e-23 99.4
MS.gene67328.t1 MTR_8g463130 32.836 268 124 16 78 340 38 254 5.10e-21 91.3
MS.gene67328.t1 MTR_8g463130 32.836 268 124 16 78 340 66 282 5.13e-21 92.0
MS.gene67328.t1 MTR_1g086350 32.510 243 123 9 80 313 104 314 7.19e-21 92.8
MS.gene67328.t1 MTR_1g086350 32.510 243 123 9 80 313 120 330 8.67e-21 92.8
MS.gene67328.t1 MTR_3g068200 31.227 269 130 10 55 307 100 329 1.05e-20 92.8
MS.gene67328.t1 MTR_2g008850 37.037 216 106 12 129 339 44 234 1.49e-20 89.7
MS.gene67328.t1 MTR_1g086350 32.231 242 123 9 81 313 19 228 1.97e-20 90.5
MS.gene67328.t1 MTR_2g078760 32.830 265 122 16 78 337 38 251 2.49e-20 89.4
MS.gene67328.t1 MTR_5g080680 34.759 187 91 7 135 307 167 336 2.49e-20 91.7
MS.gene67328.t1 MTR_2g008850 37.037 216 106 12 129 339 90 280 2.75e-20 89.7
MS.gene67328.t1 MTR_2g078760 32.830 265 122 16 78 337 117 330 1.00e-19 89.0
MS.gene67328.t1 MTR_5g063940 32.319 263 130 11 78 339 19 234 1.20e-19 87.0
MS.gene67328.t1 MTR_5g063940 32.714 269 129 14 74 339 62 281 1.95e-19 87.4
MS.gene67328.t1 MTR_4g123080 28.956 297 142 12 45 314 54 308 1.97e-19 88.6
MS.gene67328.t1 MTR_4g123080 28.956 297 142 12 45 314 72 326 2.74e-19 88.6
MS.gene67328.t1 MTR_4g094208 35.849 212 106 12 133 339 90 276 4.36e-19 86.3
MS.gene67328.t1 MTR_3g091060 29.057 265 142 10 76 340 123 341 8.86e-19 86.7
MS.gene67328.t1 MTR_5g024340 27.070 314 173 12 52 352 90 360 1.03e-18 86.7
MS.gene67328.t1 MTR_3g107880 28.826 281 150 12 80 353 122 359 1.60e-18 86.3
MS.gene67328.t1 MTR_3g107880 28.826 281 150 12 80 353 65 302 1.68e-18 85.5
MS.gene67328.t1 MTR_3g107880 28.826 281 150 12 80 353 123 360 1.81e-18 86.3
MS.gene67328.t1 MTR_3g074610 37.255 204 101 11 138 339 103 281 2.01e-18 84.7
MS.gene67328.t1 MTR_4g125810 31.050 219 123 8 80 298 255 445 6.00e-18 85.1
MS.gene67328.t1 MTR_3g104710 29.646 226 131 7 73 295 281 481 2.03e-17 84.0
MS.gene67328.t1 MTR_4g094542 32.353 272 123 18 75 339 147 364 3.24e-17 82.4
MS.gene67328.t1 MTR_1g028300 30.769 260 136 9 80 337 147 364 3.38e-17 82.4
MS.gene67328.t1 MTR_1g050520 26.207 290 169 11 55 339 395 644 9.98e-17 82.0
MS.gene67328.t1 MTR_2g033000 32.984 191 98 7 136 316 145 315 1.04e-16 80.9
MS.gene67328.t1 MTR_1g015110 29.954 217 124 7 80 293 292 483 2.01e-16 80.9
MS.gene67328.t1 MTR_8g102550 29.224 219 123 7 80 298 154 340 5.74e-16 79.0
MS.gene67328.t1 MTR_3g464650 28.295 258 142 13 43 299 60 275 7.46e-16 77.8
MS.gene67328.t1 MTR_2g078760 32.579 221 100 14 74 289 113 289 9.79e-15 74.3
MS.gene67328.t1 MTR_4g007440 27.315 216 116 6 153 352 151 341 1.35e-13 71.6
MS.gene67328.t1 MTR_1g019760 31.111 225 126 12 137 353 108 311 2.58e-13 70.9
MS.gene67328.t1 MTR_1g019760 31.884 207 113 12 137 337 108 292 4.25e-13 70.5
MS.gene67328.t1 MTR_1g014190 27.854 219 117 9 153 352 151 347 7.05e-13 69.3
MS.gene67328.t1 MTR_5g071550 26.000 250 143 11 50 298 126 334 7.62e-13 69.3
MS.gene67328.t1 MTR_3g105880 25.231 325 166 15 80 355 54 350 7.89e-13 69.3
MS.gene67328.t1 MTR_1g014190 27.854 219 117 9 153 352 189 385 8.57e-13 69.3
MS.gene67328.t1 MTR_1g116260 27.129 317 154 15 78 348 80 365 1.36e-12 68.6
MS.gene67328.t1 MTR_3g105880 28.750 160 86 4 153 303 151 291 1.93e-12 67.8
MS.gene67328.t1 MTR_3g101540 29.148 223 133 10 137 353 109 312 2.70e-12 67.8
MS.gene67328.t1 MTR_3g101540 29.148 223 133 10 137 353 109 312 2.81e-12 67.8
MS.gene67328.t1 MTR_7g081020 30.047 213 86 9 175 341 157 352 4.69e-12 67.0
MS.gene67328.t1 MTR_4g119830 29.508 183 93 6 146 303 263 434 2.00e-11 65.5
MS.gene67328.t1 MTR_7g100240 26.336 262 140 10 78 313 71 305 7.19e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene67328.t1 AT3G05640 59.882 339 126 2 2 340 22 350 1.50e-157 446
MS.gene67328.t1 AT3G05640 59.882 339 126 2 2 340 22 350 1.50e-157 446
MS.gene67328.t1 AT3G05640 59.882 339 126 2 2 340 22 350 1.50e-157 446
MS.gene67328.t1 AT5G27930 56.932 339 145 1 1 338 15 353 2.50e-152 433
MS.gene67328.t1 AT5G27930 56.932 339 145 1 1 338 15 353 2.50e-152 433
MS.gene67328.t1 AT3G16800 55.263 342 144 3 1 340 15 349 2.68e-139 399
MS.gene67328.t1 AT3G16800 55.263 342 144 3 1 340 15 349 2.68e-139 399
MS.gene67328.t1 AT3G16800 55.263 342 144 3 1 340 15 349 2.68e-139 399
MS.gene67328.t1 AT5G27930 56.794 287 123 1 1 286 15 301 1.25e-127 369
MS.gene67328.t1 AT3G16800 57.854 261 102 2 81 340 1 254 4.82e-109 319
MS.gene67328.t1 AT3G16800 57.854 261 102 2 81 340 1 254 4.82e-109 319
MS.gene67328.t1 AT3G02750 44.505 364 165 2 27 353 44 407 1.02e-106 322
MS.gene67328.t1 AT3G02750 44.505 364 165 2 27 353 44 407 1.02e-106 322
MS.gene67328.t1 AT1G16220 46.605 324 153 2 37 340 54 377 2.06e-102 310
MS.gene67328.t1 AT5G36250 44.648 327 156 1 44 345 64 390 2.72e-102 309
MS.gene67328.t1 AT1G79630 43.895 344 153 1 37 340 57 400 4.41e-100 305
MS.gene67328.t1 AT1G79630 43.895 344 153 1 37 340 53 396 7.28e-100 304
MS.gene67328.t1 AT3G02750 40.602 399 165 3 27 353 44 442 4.68e-99 303
MS.gene67328.t1 AT5G36250 43.582 335 150 2 50 345 70 404 1.77e-98 300
MS.gene67328.t1 AT4G03415 46.732 306 146 4 49 339 69 372 5.40e-97 296
MS.gene67328.t1 AT4G03415 46.732 306 146 4 49 339 69 372 5.40e-97 296
MS.gene67328.t1 AT4G03415 46.732 306 146 4 49 339 69 372 5.40e-97 296
MS.gene67328.t1 AT1G03590 44.728 313 160 4 38 339 52 362 3.30e-94 288
MS.gene67328.t1 AT5G01700 42.679 321 182 2 34 354 34 352 9.02e-91 277
MS.gene67328.t1 AT1G79630 44.409 313 134 1 68 340 18 330 5.37e-90 277
MS.gene67328.t1 AT1G79630 44.409 313 134 1 68 340 18 330 5.37e-90 277
MS.gene67328.t1 AT5G01700 45.246 305 159 3 53 354 4 303 6.34e-90 273
MS.gene67328.t1 AT5G36250 47.170 265 115 1 50 289 70 334 9.54e-87 266
MS.gene67328.t1 AT1G79630 54.028 211 97 0 130 340 80 290 5.87e-79 247
MS.gene67328.t1 AT1G79630 54.028 211 97 0 130 340 80 290 5.87e-79 247
MS.gene67328.t1 AT1G79630 54.028 211 97 0 130 340 80 290 5.87e-79 247
MS.gene67328.t1 AT1G79630 54.028 211 97 0 130 340 80 290 5.87e-79 247
MS.gene67328.t1 AT4G32950 42.574 303 153 4 46 345 41 325 1.90e-77 241
MS.gene67328.t1 AT5G26010 41.946 298 160 4 45 341 41 326 1.40e-73 231
MS.gene67328.t1 AT3G16800 49.321 221 100 4 1 219 15 225 1.58e-72 225
MS.gene67328.t1 AT4G32950 42.636 258 130 3 46 303 41 280 3.28e-62 200
MS.gene67328.t1 AT2G20050 27.221 349 189 10 1 320 68 380 1.65e-30 123
MS.gene67328.t1 AT2G20050 27.221 349 189 10 1 320 68 380 1.66e-30 123
MS.gene67328.t1 AT3G06270 28.846 312 156 9 44 322 46 324 3.94e-30 118
MS.gene67328.t1 AT1G07430 35.088 228 122 8 80 306 159 361 3.91e-25 105
MS.gene67328.t1 AT4G31750 29.078 282 153 11 71 351 56 291 5.56e-25 103
MS.gene67328.t1 AT4G31750 29.078 282 153 11 71 351 56 291 5.56e-25 103
MS.gene67328.t1 AT4G31750 29.078 282 153 11 71 351 56 291 5.73e-25 103
MS.gene67328.t1 AT5G10740 31.203 266 137 10 74 339 60 279 9.50e-25 103
MS.gene67328.t1 AT5G10740 31.203 266 137 10 74 339 60 279 9.50e-25 103
MS.gene67328.t1 AT5G59220 35.242 227 118 10 79 304 149 347 4.14e-23 99.8
MS.gene67328.t1 AT4G28400 33.113 302 144 19 44 340 13 261 1.78e-22 95.5
MS.gene67328.t1 AT5G24940 29.323 266 142 9 74 339 60 279 2.72e-22 97.8
MS.gene67328.t1 AT2G20630 33.457 269 127 15 75 340 60 279 3.08e-22 95.1
MS.gene67328.t1 AT4G28400 32.781 302 145 19 44 340 35 283 4.10e-22 95.1
MS.gene67328.t1 AT1G18030 30.292 274 139 9 81 339 112 348 1.48e-21 94.7
MS.gene67328.t1 AT1G43900 30.833 240 124 10 76 314 152 350 1.52e-21 94.7
MS.gene67328.t1 AT2G20630 33.582 268 126 15 75 339 60 278 1.93e-21 93.2
MS.gene67328.t1 AT5G53140 29.461 241 131 9 76 316 130 331 3.15e-20 91.7
MS.gene67328.t1 AT5G53140 29.461 241 131 9 76 316 130 331 3.15e-20 91.7
MS.gene67328.t1 AT2G33700 30.142 282 129 12 80 347 125 352 4.35e-20 90.9
MS.gene67328.t1 AT3G11410 29.249 253 119 9 80 310 139 353 5.19e-20 90.9
MS.gene67328.t1 AT3G51470 27.575 301 157 12 68 352 43 298 9.05e-20 89.0
MS.gene67328.t1 AT1G48040 31.752 274 141 10 80 344 118 354 1.01e-19 89.7
MS.gene67328.t1 AT3G17250 28.571 273 153 8 80 344 160 398 1.47e-19 89.7
MS.gene67328.t1 AT3G51470 27.575 301 157 12 68 352 87 342 1.59e-19 89.0
MS.gene67328.t1 AT2G29380 33.054 239 107 12 80 303 114 314 3.36e-19 88.2
MS.gene67328.t1 AT1G22280 36.408 206 104 12 136 339 106 286 4.42e-19 86.7
MS.gene67328.t1 AT1G22280 36.408 206 104 12 136 339 100 280 5.76e-19 86.3
MS.gene67328.t1 AT2G25620 29.643 280 136 14 80 344 130 363 9.61e-19 87.0
MS.gene67328.t1 AT2G25620 29.643 280 136 14 80 344 130 363 9.61e-19 87.0
MS.gene67328.t1 AT1G18030 31.364 220 109 7 81 289 112 300 1.19e-18 85.9
MS.gene67328.t1 AT3G62260 30.189 265 146 9 80 339 29 259 1.58e-18 85.1
MS.gene67328.t1 AT3G62260 30.189 265 146 9 80 339 118 348 5.16e-18 84.7
MS.gene67328.t1 AT3G62260 30.189 265 146 9 80 339 119 349 5.34e-18 84.7
MS.gene67328.t1 AT1G34750 35.784 204 104 11 136 337 101 279 3.36e-17 81.3
MS.gene67328.t1 AT1G34750 35.784 204 104 11 136 337 101 279 3.36e-17 81.3
MS.gene67328.t1 AT1G34750 35.784 204 104 11 136 337 101 279 3.36e-17 81.3
MS.gene67328.t1 AT5G51760 38.095 147 73 5 161 306 200 329 3.89e-17 82.4
MS.gene67328.t1 AT5G51760 38.095 147 73 5 161 306 230 359 5.46e-17 82.0
MS.gene67328.t1 AT1G68410 30.797 276 142 14 81 344 76 314 6.81e-17 82.0
MS.gene67328.t1 AT1G68410 30.797 276 142 14 81 344 76 314 6.81e-17 82.0
MS.gene67328.t1 AT1G68410 30.797 276 142 14 81 344 76 314 6.81e-17 82.0
MS.gene67328.t1 AT1G68410 30.797 276 142 14 81 344 76 314 6.81e-17 82.0
MS.gene67328.t1 AT4G26080 30.435 230 129 9 70 299 164 362 1.74e-16 80.5
MS.gene67328.t1 AT1G67820 27.820 266 146 10 45 307 83 305 2.53e-16 80.1
MS.gene67328.t1 AT1G67820 28.137 263 140 10 50 307 123 341 4.01e-16 79.7
MS.gene67328.t1 AT5G57050 30.374 214 120 7 80 293 122 306 6.92e-16 78.6
MS.gene67328.t1 AT5G57050 30.374 214 120 7 80 293 162 346 8.26e-16 78.6
MS.gene67328.t1 AT1G72770 28.879 232 127 8 80 298 240 446 3.69e-15 77.0
MS.gene67328.t1 AT1G72770 28.879 232 127 8 80 298 240 446 3.69e-15 77.0
MS.gene67328.t1 AT1G72770 28.879 232 127 8 80 298 240 446 3.69e-15 77.0
MS.gene67328.t1 AT4G28400 32.271 251 119 17 44 289 35 239 1.06e-14 73.6
MS.gene67328.t1 AT2G40860 23.986 296 175 11 51 339 396 648 1.65e-14 75.1
MS.gene67328.t1 AT2G40860 24.231 260 153 8 51 303 396 618 1.87e-14 75.1
MS.gene67328.t1 AT1G07160 26.400 250 146 8 50 299 125 336 2.57e-14 73.9
MS.gene67328.t1 AT2G40860 23.986 296 175 11 51 339 298 550 2.76e-14 74.3
MS.gene67328.t1 AT4G31860 29.524 210 107 8 153 345 151 336 4.22e-14 73.2
MS.gene67328.t1 AT1G17550 25.862 232 129 7 80 295 239 443 1.17e-13 72.4
MS.gene67328.t1 AT1G17550 25.862 232 129 7 80 295 239 443 1.17e-13 72.4
MS.gene67328.t1 AT2G34740 27.491 291 156 14 54 339 94 334 1.28e-13 71.6
MS.gene67328.t1 AT1G47380 30.882 204 115 10 137 335 107 289 1.91e-13 71.6
MS.gene67328.t1 AT1G34750 36.538 156 79 9 136 289 101 238 3.61e-13 68.9
MS.gene67328.t1 AT4G31860 31.250 160 84 5 153 304 151 292 3.91e-13 69.7
MS.gene67328.t1 AT3G55050 29.126 206 97 9 175 341 165 360 7.88e-12 66.2
MS.gene67328.t1 AT3G55050 29.126 206 97 9 175 341 165 360 7.88e-12 66.2
MS.gene67328.t1 AT3G17090 29.787 188 98 7 162 325 153 330 1.25e-11 65.9
MS.gene67328.t1 AT3G51370 29.787 188 99 7 162 325 147 325 3.23e-11 64.3
MS.gene67328.t1 AT3G51370 29.787 188 99 7 162 325 147 325 3.23e-11 64.3
MS.gene67328.t1 AT3G51370 28.241 216 108 9 162 339 62 268 3.24e-11 63.9
MS.gene67328.t1 AT3G16560 28.804 184 101 6 146 310 262 434 3.66e-11 64.7
MS.gene67328.t1 AT3G16560 27.315 216 115 8 146 335 262 461 4.96e-11 64.3
MS.gene67328.t1 AT3G16560 27.315 216 115 8 146 335 262 461 4.96e-11 64.3
MS.gene67328.t1 AT3G16560 27.315 216 115 8 146 335 262 461 4.96e-11 64.3

Find 60 sgRNAs with CRISPR-Local

Find 200 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCCTGTGTGTTCACTAAAA+AGG 0.141469 2.3:+55395694 MS.gene67328:CDS
GTATATATACTTGGTAAATT+TGG 0.186405 2.3:-55397580 None:intergenic
TGTTTCTGATGCTAGGAATT+TGG 0.210278 2.3:+55396369 MS.gene67328:intron
ATCAGGATTGTCTAATTGTT+TGG 0.256227 2.3:+55395732 MS.gene67328:CDS
ATCTCCATATGTATGATATA+TGG 0.320092 2.3:+55396562 MS.gene67328:CDS
TATGGATCAATTTGTCATCT+TGG 0.343060 2.3:+55398032 MS.gene67328:CDS
ACAAAGAAAACTCACTACTA+TGG 0.347117 2.3:+55398014 MS.gene67328:CDS
TCAGGATTGTCTAATTGTTT+GGG 0.362906 2.3:+55395733 MS.gene67328:CDS
GAAATGTTGTTGAATTCATC+TGG 0.382145 2.3:+55395641 MS.gene67328:CDS
AACCAGGAGTATATAGGGTT+TGG 0.387253 2.3:+55397896 MS.gene67328:CDS
TTGAACAAAGACAAGAGTTA+TGG 0.390496 2.3:+55395560 MS.gene67328:CDS
AGCTTTGACAGTTGTCAAAC+AGG 0.395302 2.3:+55396671 MS.gene67328:CDS
AGTCCTGGACTCTTACCATT+TGG 0.399751 2.3:-55397922 None:intergenic
AAGTCAGTGGTAAGTTGAAT+AGG 0.407016 2.3:-55397553 None:intergenic
GACTTTCGCTGCAATTGATC+AGG 0.414859 2.3:+55396602 MS.gene67328:CDS
CTAGCAATATCAAGAGCATT+TGG 0.417294 2.3:+55397943 MS.gene67328:CDS
AGATGAAGCAGAGCGGATAA+TGG 0.421589 2.3:+55397840 MS.gene67328:intron
TTTCGATGGACATGGACCTT+GGG 0.429324 2.3:+55396422 MS.gene67328:CDS
AGATGAACCAGGAGTATATA+GGG 0.437885 2.3:+55397891 MS.gene67328:CDS
TTGCAATTGGCAGGAAAACC+TGG 0.438854 2.3:+55396494 MS.gene67328:CDS
CAGGATCTAAAGCAGCATAC+TGG 0.443167 2.3:+55396621 MS.gene67328:CDS
GATTATTGTGTAAAAGACTT+TGG 0.443685 2.3:+55397967 MS.gene67328:CDS
GAGCGGATAATGGAATCAAA+TGG 0.448972 2.3:+55397850 MS.gene67328:CDS
GCTTCCATATATCATACATA+TGG 0.457067 2.3:-55396566 None:intergenic
TAAAATGTGCCACACATGAA+TGG 0.459807 2.3:+55398875 MS.gene67328:CDS
AAGATGAACCAGGAGTATAT+AGG 0.462389 2.3:+55397890 MS.gene67328:CDS
GCTCTTGATATTGCTAGTCC+TGG 0.470320 2.3:-55397937 None:intergenic
CACACAAAATAATGTCCTCT+TGG 0.472335 2.3:-55396395 None:intergenic
TTTGTCATCTTGGCAACTGA+TGG 0.482093 2.3:+55398042 MS.gene67328:CDS
AGCTGTAGTTCCACTTTGAA+AGG 0.497677 2.3:-55396652 None:intergenic
TTGTCATCTTGGCAACTGAT+GGG 0.498931 2.3:+55398043 MS.gene67328:CDS
GGGTCAGAAAGGATTCAATC+AGG 0.508777 2.3:+55395715 MS.gene67328:CDS
CTGTTTCCATCTTAAAACTC+AGG 0.525949 2.3:-55396533 None:intergenic
CTTAAGTTTCCATTCATGTG+TGG 0.531187 2.3:-55398884 None:intergenic
TTAGCAACCACTTCAGAGAA+TGG 0.533579 2.3:+55397520 MS.gene67328:CDS
ATCCAAACCCTATATACTCC+TGG 0.534879 2.3:-55397898 None:intergenic
GAATGGAAACTTAAGAGAAA+AGG 0.535637 2.3:+55398892 MS.gene67328:CDS
CAGTGTGCCATTCTCTGAAG+TGG 0.536531 2.3:-55397527 None:intergenic
TGAGAGACATGTTGTGAAGG+GGG 0.538817 2.3:-55398961 None:intergenic
TGCAGCGAAAGTCTTTATGT+AGG 0.541790 2.3:-55396592 None:intergenic
TATAGGGTTTGGATGCCAAA+TGG 0.542128 2.3:+55397907 MS.gene67328:CDS
ATGCCAAATGGTAAGAGTCC+AGG 0.549842 2.3:+55397919 MS.gene67328:CDS
AGCGGATAATGGAATCAAAT+GGG 0.550664 2.3:+55397851 MS.gene67328:CDS
ATCTTAAAACTCAGGTCAAG+TGG 0.557486 2.3:-55396525 None:intergenic
GGAATTGATTCCTTTCAAAG+TGG 0.563303 2.3:+55396642 MS.gene67328:CDS
AGTTGTGAAAGCAATGGTAA+AGG 0.564998 2.3:+55395604 MS.gene67328:CDS
TATCTCATAATAGCAAATGT+TGG 0.567118 2.3:+55397481 MS.gene67328:CDS
GGATTGTCTAATTGTTTGGG+AGG 0.576634 2.3:+55395736 MS.gene67328:CDS
TTCGATGGACATGGACCTTG+GGG 0.590693 2.3:+55396423 MS.gene67328:CDS
TAAATTTGGCTTCAAGTCAG+TGG 0.592173 2.3:-55397566 None:intergenic
CAAAGACAAGAGTTATGGAA+AGG 0.594548 2.3:+55395565 MS.gene67328:CDS
TGTCATCTTGGCAACTGATG+GGG 0.603747 2.3:+55398044 MS.gene67328:CDS
GTTTGAGAGACATGTTGTGA+AGG 0.605591 2.3:-55398964 None:intergenic
TTTGAGAGACATGTTGTGAA+GGG 0.607324 2.3:-55398963 None:intergenic
TTCGATACAAAATGTCCCCA+AGG 0.608737 2.3:-55396438 None:intergenic
ATGGAAAGGATGATGATGCA+AGG 0.614043 2.3:+55395579 MS.gene67328:CDS
TTGAGAGACATGTTGTGAAG+GGG 0.628053 2.3:-55398962 None:intergenic
AAGGAAAGTTGTGAAAGCAA+TGG 0.649770 2.3:+55395598 MS.gene67328:CDS
CTAGGAATTTGGATGCCAAG+AGG 0.693608 2.3:+55396380 MS.gene67328:intron
TAATTTCAGATGAAGCAGAG+CGG 0.744025 2.3:+55397833 MS.gene67328:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GAATAGAATTTTTAATTATT+AGG - chr2.3:55396224-55396243 None:intergenic 10.0%
!! ATCATCAAAAATCAAATTAA+TGG + chr2.3:55397725-55397744 MS.gene67328:intron 15.0%
!! AAATCATAGACAATGAAATT+TGG - chr2.3:55395782-55395801 None:intergenic 20.0%
!! AAATTATTCATTGTTGAGTA+TGG + chr2.3:55396905-55396924 MS.gene67328:intron 20.0%
!! AACATCAATAATACTAACTT+AGG - chr2.3:55397451-55397470 None:intergenic 20.0%
!! AATTTGGAAACTGAATATTT+AGG - chr2.3:55395766-55395785 None:intergenic 20.0%
!! GTATATATACTTGGTAAATT+TGG - chr2.3:55397583-55397602 None:intergenic 20.0%
!! TATTTATTCAAAACTAGCTA+CGG - chr2.3:55397313-55397332 None:intergenic 20.0%
!! TGATATTATCAAACTAATTG+TGG + chr2.3:55398310-55398329 MS.gene67328:intron 20.0%
!! TTAGTATTATTGATGTTTCA+GGG + chr2.3:55397454-55397473 MS.gene67328:intron 20.0%
!!! AAACTGTTTCTTATTTCTTT+GGG + chr2.3:55398643-55398662 MS.gene67328:intron 20.0%
!!! CAATTAGTTTGATAATATCA+CGG - chr2.3:55398310-55398329 None:intergenic 20.0%
!!! GATGTTAATCTGAAATTTTA+TGG - chr2.3:55397665-55397684 None:intergenic 20.0%
!!! TAATTATTAGGCAATTTTTG+CGG - chr2.3:55396212-55396231 None:intergenic 20.0%
!!! TTATATTTATCGTTTTTCGA+AGG + chr2.3:55398105-55398124 MS.gene67328:intron 20.0%
!!! TTTTTTGTTATGCAATACTT+AGG - chr2.3:55397107-55397126 None:intergenic 20.0%
! AAACAATTAATCATAGCGTT+CGG - chr2.3:55397174-55397193 None:intergenic 25.0%
! AGGTCAAAGAGTTAAAATAT+CGG - chr2.3:55398587-55398606 None:intergenic 25.0%
! ATCTCCATATGTATGATATA+TGG + chr2.3:55396562-55396581 MS.gene67328:CDS 25.0%
! ATGCCTTCAATTATGTTAAT+AGG - chr2.3:55398728-55398747 None:intergenic 25.0%
! ATTATGTTAATAGGAGGAAT+AGG - chr2.3:55398719-55398738 None:intergenic 25.0%
! GATTATTGTGTAAAAGACTT+TGG + chr2.3:55397967-55397986 MS.gene67328:CDS 25.0%
! GTTAGTATTATTGATGTTTC+AGG + chr2.3:55397453-55397472 MS.gene67328:intron 25.0%
! TAACTGATGTGAAAATAGTT+TGG - chr2.3:55395907-55395926 None:intergenic 25.0%
! TATCTCATAATAGCAAATGT+TGG + chr2.3:55397481-55397500 MS.gene67328:CDS 25.0%
! TTAAGTCATTGAAATGTGAA+AGG - chr2.3:55398084-55398103 None:intergenic 25.0%
! TTGAAACTCAACATACTAAT+AGG - chr2.3:55397031-55397050 None:intergenic 25.0%
!! AACTGTTTCTTATTTCTTTG+GGG + chr2.3:55398644-55398663 MS.gene67328:intron 25.0%
!! AGTTAAGTATGTTTTCCTTA+AGG + chr2.3:55397253-55397272 MS.gene67328:intron 25.0%
!! ATAGAGAGAGTATATATACT+TGG - chr2.3:55397592-55397611 None:intergenic 25.0%
!! CAAACTGTTTCTTATTTCTT+TGG + chr2.3:55398642-55398661 MS.gene67328:intron 25.0%
!! TATGCTAATCAAACTTTTCA+AGG - chr2.3:55396323-55396342 None:intergenic 25.0%
!! TATGGATTATATTCACTGAT+AGG + chr2.3:55396923-55396942 MS.gene67328:intron 25.0%
!! TGTTAACAAAAGCTACATTT+TGG + chr2.3:55398261-55398280 MS.gene67328:intron 25.0%
!!! ATGATATTGTTTTGCAAAGT+GGG - chr2.3:55396106-55396125 None:intergenic 25.0%
!!! GTTTTTCGAAGGAAAAAAAA+TGG + chr2.3:55398116-55398135 MS.gene67328:intron 25.0%
!!! TATGATATTGTTTTGCAAAG+TGG - chr2.3:55396107-55396126 None:intergenic 25.0%
!!! TCTATGATTTTAGCTCTATT+TGG + chr2.3:55395792-55395811 MS.gene67328:intron 25.0%
AAATTCTAGCACAATTTAGG+CGG + chr2.3:55398454-55398473 MS.gene67328:intron 30.0%
AATAAGAAACAGTTTGATCG+AGG - chr2.3:55398638-55398657 None:intergenic 30.0%
AATCCAAATATGCATTGAGT+CGG - chr2.3:55398203-55398222 None:intergenic 30.0%
ACAAAGAAAACTCACTACTA+TGG + chr2.3:55398014-55398033 MS.gene67328:CDS 30.0%
ACCAAATTCTAGCACAATTT+AGG + chr2.3:55398451-55398470 MS.gene67328:intron 30.0%
ATAAGAAACAGTTTGATCGA+GGG - chr2.3:55398637-55398656 None:intergenic 30.0%
ATCAGGATTGTCTAATTGTT+TGG + chr2.3:55395732-55395751 MS.gene67328:CDS 30.0%
ATGTTGAGTTTCAACTATGA+GGG + chr2.3:55397037-55397056 MS.gene67328:intron 30.0%
ATTAGAGTGAGCATATCATT+AGG + chr2.3:55398398-55398417 MS.gene67328:intron 30.0%
CAATTGCAAAGCAAAAAAGT+TGG - chr2.3:55396483-55396502 None:intergenic 30.0%
CATGTATAACTCTATTCATC+GGG - chr2.3:55398349-55398368 None:intergenic 30.0%
CCTCCTATTAACATAATTGA+AGG + chr2.3:55398722-55398741 MS.gene67328:intron 30.0%
CCTTCAATTATGTTAATAGG+AGG - chr2.3:55398725-55398744 None:intergenic 30.0%
CTATACAAGATCAGATGTTA+CGG - chr2.3:55396705-55396724 None:intergenic 30.0%
GAAATGTTGTTGAATTCATC+TGG + chr2.3:55395641-55395660 MS.gene67328:CDS 30.0%
GAATGGAAACTTAAGAGAAA+AGG + chr2.3:55398892-55398911 MS.gene67328:CDS 30.0%
GCATGTATAACTCTATTCAT+CGG - chr2.3:55398350-55398369 None:intergenic 30.0%
GCTTCCATATATCATACATA+TGG - chr2.3:55396569-55396588 None:intergenic 30.0%
TAATGCAGATCTTTATGTGA+GGG - chr2.3:55397624-55397643 None:intergenic 30.0%
TATGGATCAATTTGTCATCT+TGG + chr2.3:55398032-55398051 MS.gene67328:CDS 30.0%
TATGTTGAGTTTCAACTATG+AGG + chr2.3:55397036-55397055 MS.gene67328:intron 30.0%
TCAATGCATATTTGGATTGA+TGG + chr2.3:55398205-55398224 MS.gene67328:intron 30.0%
TCAGGATTGTCTAATTGTTT+GGG + chr2.3:55395733-55395752 MS.gene67328:CDS 30.0%
TGAAAATGTTTCGTAAACAC+AGG + chr2.3:55398165-55398184 MS.gene67328:intron 30.0%
TGAATAGAGTTATACATGCT+AGG + chr2.3:55398351-55398370 MS.gene67328:intron 30.0%
TGCAAAAAAGTAGTAGAGAA+CGG - chr2.3:55397416-55397435 None:intergenic 30.0%
TGCTGTATCTTAAAATGGTT+TGG + chr2.3:55396761-55396780 MS.gene67328:intron 30.0%
TTCTCTGCTGTATCTTAAAA+TGG + chr2.3:55396756-55396775 MS.gene67328:intron 30.0%
TTGAACAAAGACAAGAGTTA+TGG + chr2.3:55395560-55395579 MS.gene67328:CDS 30.0%
! AAAAAGTTGGCAGCATTTTT+CGG - chr2.3:55396470-55396489 None:intergenic 30.0%
! AAAGGCCATACAATTTTTCT+GGG + chr2.3:55397370-55397389 MS.gene67328:intron 30.0%
! AAATCAGTCTAAAGCTATCT+CGG - chr2.3:55397687-55397706 None:intergenic 30.0%
! ATTGACTTTGCACAATGATA+AGG - chr2.3:55396868-55396887 None:intergenic 30.0%
! TTAGTATTTTCTCCTCAACA+GGG + chr2.3:55398553-55398572 MS.gene67328:intron 30.0%
!! GTTATTTTCATAAGCTCTCT+AGG - chr2.3:55395951-55395970 None:intergenic 30.0%
!!! AAATGGGAGAGTATTTTGTA+TGG + chr2.3:55397867-55397886 MS.gene67328:CDS 30.0%
!!! CAACTTTTTTGCTTTGCAAT+TGG + chr2.3:55396481-55396500 MS.gene67328:CDS 30.0%
AAACTACTCTAGTACAGCTA+GGG - chr2.3:55396027-55396046 None:intergenic 35.0%
AAGGAAAGTTGTGAAAGCAA+TGG + chr2.3:55395598-55395617 MS.gene67328:CDS 35.0%
ACTAATAGGTCAGTGATAGT+GGG - chr2.3:55397017-55397036 None:intergenic 35.0%
AGTATCTTGTTCTGCATAAC+TGG + chr2.3:55396289-55396308 MS.gene67328:intron 35.0%
AGTTGTGAAAGCAATGGTAA+AGG + chr2.3:55395604-55395623 MS.gene67328:CDS 35.0%
AGTTTCAACTATGAGGGTAA+GGG + chr2.3:55397043-55397062 MS.gene67328:intron 35.0%
ATAGAGAAAAAGCAGCTGAT+AGG + chr2.3:55398848-55398867 MS.gene67328:CDS 35.0%
ATCTTAAAACTCAGGTCAAG+TGG - chr2.3:55396528-55396547 None:intergenic 35.0%
ATGCAAACCTTATCCTTTGT+AGG + chr2.3:55396799-55396818 MS.gene67328:intron 35.0%
ATGTCCCCAGAAAAATTGTA+TGG - chr2.3:55397378-55397397 None:intergenic 35.0%
ATTTCTGCTTGTTTCATCTC+AGG + chr2.3:55398771-55398790 MS.gene67328:intron 35.0%
CAAAGACAAGAGTTATGGAA+AGG + chr2.3:55395565-55395584 MS.gene67328:CDS 35.0%
CACACAAAATAATGTCCTCT+TGG - chr2.3:55396398-55396417 None:intergenic 35.0%
CTGTTTCCATCTTAAAACTC+AGG - chr2.3:55396536-55396555 None:intergenic 35.0%
CTTAAGTTTCCATTCATGTG+TGG - chr2.3:55398887-55398906 None:intergenic 35.0%
CTTTGATCATCCATATGTGT+AGG - chr2.3:55398494-55398513 None:intergenic 35.0%
GAACACACAGGAAAAATTGT+TGG - chr2.3:55395687-55395706 None:intergenic 35.0%
GAACTTGTAACCAACAAGAA+GGG + chr2.3:55396837-55396856 MS.gene67328:intron 35.0%
GCCTAAATTGTGCTAGAATT+TGG - chr2.3:55398455-55398474 None:intergenic 35.0%
GCTTGCCAATTTGATTCAAA+AGG - chr2.3:55396057-55396076 None:intergenic 35.0%
GGAAAAATTGTTGGACTTGT+CGG - chr2.3:55395678-55395697 None:intergenic 35.0%
GGATTATATTCACTGATAGG+TGG + chr2.3:55396926-55396945 MS.gene67328:intron 35.0%
GTAATGCAGATCTTTATGTG+AGG - chr2.3:55397625-55397644 None:intergenic 35.0%
GTATCTTGTTCTGCATAACT+GGG + chr2.3:55396290-55396309 MS.gene67328:intron 35.0%
TAAAATGTGCCACACATGAA+TGG + chr2.3:55398875-55398894 MS.gene67328:CDS 35.0%
TAAACTACTCTAGTACAGCT+AGG - chr2.3:55396028-55396047 None:intergenic 35.0%
TAATTTCAGATGAAGCAGAG+CGG + chr2.3:55397833-55397852 MS.gene67328:intron 35.0%
TACTAATAGGTCAGTGATAG+TGG - chr2.3:55397018-55397037 None:intergenic 35.0%
TAGAGTTATACATGCTAGGT+TGG + chr2.3:55398355-55398374 MS.gene67328:intron 35.0%
TCCTGTGTGTTCACTAAAAA+GGG + chr2.3:55395695-55395714 MS.gene67328:CDS 35.0%
TCTCAACTCGTTTGAACTAA+AGG - chr2.3:55398607-55398626 None:intergenic 35.0%
TGAACTTGTAACCAACAAGA+AGG + chr2.3:55396836-55396855 MS.gene67328:intron 35.0%
TTCACTAAAAAGGGTCAGAA+AGG + chr2.3:55395704-55395723 MS.gene67328:CDS 35.0%
TTCCTGTGTGTTCACTAAAA+AGG + chr2.3:55395694-55395713 MS.gene67328:CDS 35.0%
TTTGAGAGACATGTTGTGAA+GGG - chr2.3:55398966-55398985 None:intergenic 35.0%
! AAACCGACTCAATGCATATT+TGG + chr2.3:55398197-55398216 MS.gene67328:intron 35.0%
! AAGATGAACCAGGAGTATAT+AGG + chr2.3:55397890-55397909 MS.gene67328:CDS 35.0%
! AAGGCCATACAATTTTTCTG+GGG + chr2.3:55397371-55397390 MS.gene67328:intron 35.0%
! AAGTCAGTGGTAAGTTGAAT+AGG - chr2.3:55397556-55397575 None:intergenic 35.0%
! AATTTTCATAGCTGCTTGGT+TGG - chr2.3:55398812-55398831 None:intergenic 35.0%
! AGATGAACCAGGAGTATATA+GGG + chr2.3:55397891-55397910 MS.gene67328:CDS 35.0%
! AGTTTTCTTTGTGTCACATC+TGG - chr2.3:55398006-55398025 None:intergenic 35.0%
! ATTGATGACATTGCTTGGAA+AGG + chr2.3:55397352-55397371 MS.gene67328:intron 35.0%
! ATTTTGTGTGGAGTTTTCGA+TGG + chr2.3:55396408-55396427 MS.gene67328:CDS 35.0%
! CAACAATTTTCATAGCTGCT+TGG - chr2.3:55398816-55398835 None:intergenic 35.0%
! GAAAGGCCATACAATTTTTC+TGG + chr2.3:55397369-55397388 MS.gene67328:intron 35.0%
! GGAATTGATTCCTTTCAAAG+TGG + chr2.3:55396642-55396661 MS.gene67328:CDS 35.0%
! GGGACATTTTGTATCGAAAA+GGG + chr2.3:55396443-55396462 MS.gene67328:CDS 35.0%
! GTTAGTATTTTCTCCTCAAC+AGG + chr2.3:55398552-55398571 MS.gene67328:intron 35.0%
! TAAATTTGGCTTCAAGTCAG+TGG - chr2.3:55397569-55397588 None:intergenic 35.0%
! TAGCGCCTTTTGAATCAAAT+TGG + chr2.3:55396049-55396068 MS.gene67328:intron 35.0%
! TGTTGATTGATGACATTGCT+TGG + chr2.3:55397347-55397366 MS.gene67328:intron 35.0%
! TGTTTCTGATGCTAGGAATT+TGG + chr2.3:55396369-55396388 MS.gene67328:intron 35.0%
! TTTTGTATGGAAGATGAACC+AGG + chr2.3:55397880-55397899 MS.gene67328:CDS 35.0%
!! AGCGGATAATGGAATCAAAT+GGG + chr2.3:55397851-55397870 MS.gene67328:CDS 35.0%
!! CAAGAGGACATTATTTTGTG+TGG + chr2.3:55396396-55396415 MS.gene67328:CDS 35.0%
!! CTAGCAATATCAAGAGCATT+TGG + chr2.3:55397943-55397962 MS.gene67328:CDS 35.0%
!! TCTACATTGTTTCTGATGCT+AGG + chr2.3:55396362-55396381 MS.gene67328:intron 35.0%
!!! ACTTGACCTGAGTTTTAAGA+TGG + chr2.3:55396527-55396546 MS.gene67328:CDS 35.0%
!!! TTTTTTGCTTTGCAATTGGC+AGG + chr2.3:55396485-55396504 MS.gene67328:CDS 35.0%
AAATCTCACTGAGCATAGCT+AGG + chr2.3:55396979-55396998 MS.gene67328:intron 40.0%
ACGAGAACGACTAACTCTAA+AGG - chr2.3:55397227-55397246 None:intergenic 40.0%
AGCTGTAGTTCCACTTTGAA+AGG - chr2.3:55396655-55396674 None:intergenic 40.0%
AGTAACAGCAACAAGCCTTA+AGG - chr2.3:55397271-55397290 None:intergenic 40.0%
ATCCAAACCCTATATACTCC+TGG - chr2.3:55397901-55397920 None:intergenic 40.0%
CCAATTCAAGCAAACCCTTT+CGG + chr2.3:55396159-55396178 MS.gene67328:intron 40.0%
GAGTTTCAACTATGAGGGTA+AGG + chr2.3:55397042-55397061 MS.gene67328:intron 40.0%
GCTTGTTTCATCTCAGGTAT+GGG + chr2.3:55398777-55398796 MS.gene67328:intron 40.0%
GGATTGTCTAATTGTTTGGG+AGG + chr2.3:55395736-55395755 MS.gene67328:CDS 40.0%
GTTTGAGAGACATGTTGTGA+AGG - chr2.3:55398967-55398986 None:intergenic 40.0%
TAAGGTTACTCCCTTCTTGT+TGG - chr2.3:55396850-55396869 None:intergenic 40.0%
TAGGTCATGTGATCGTTTAG+AGG + chr2.3:55398417-55398436 MS.gene67328:intron 40.0%
TATAGGGTTTGGATGCCAAA+TGG + chr2.3:55397907-55397926 MS.gene67328:CDS 40.0%
TCCATATGTGTAGGTCACAT+TGG - chr2.3:55398485-55398504 None:intergenic 40.0%
TGCAGCGAAAGTCTTTATGT+AGG - chr2.3:55396595-55396614 None:intergenic 40.0%
TGCTTGTTTCATCTCAGGTA+TGG + chr2.3:55398776-55398795 MS.gene67328:intron 40.0%
TTAGCAACCACTTCAGAGAA+TGG + chr2.3:55397520-55397539 MS.gene67328:CDS 40.0%
TTCGATACAAAATGTCCCCA+AGG - chr2.3:55396441-55396460 None:intergenic 40.0%
TTGAGAGACATGTTGTGAAG+GGG - chr2.3:55398965-55398984 None:intergenic 40.0%
TTGTCATCTTGGCAACTGAT+GGG + chr2.3:55398043-55398062 MS.gene67328:CDS 40.0%
TTTGTCATCTTGGCAACTGA+TGG + chr2.3:55398042-55398061 MS.gene67328:CDS 40.0%
! AACCAGGAGTATATAGGGTT+TGG + chr2.3:55397896-55397915 MS.gene67328:CDS 40.0%
! AGCTTTGACAGTTGTCAAAC+AGG + chr2.3:55396671-55396690 MS.gene67328:CDS 40.0%
! ATGGAAAGGATGATGATGCA+AGG + chr2.3:55395579-55395598 MS.gene67328:CDS 40.0%
! GGGGACATTTTGTATCGAAA+AGG + chr2.3:55396442-55396461 MS.gene67328:CDS 40.0%
!! ACCCTTTTTAGTGAACACAC+AGG - chr2.3:55395699-55395718 None:intergenic 40.0%
!! GAGCGGATAATGGAATCAAA+TGG + chr2.3:55397850-55397869 MS.gene67328:CDS 40.0%
!! TACATGCTAGGTTGGTTAAG+TGG + chr2.3:55398363-55398382 MS.gene67328:intron 40.0%
!!! TGCGGTACAAGTTAGTTTTG+CGG - chr2.3:55396194-55396213 None:intergenic 40.0%
AGATGAAGCAGAGCGGATAA+TGG + chr2.3:55397840-55397859 MS.gene67328:intron 45.0%
AGTCCTGGACTCTTACCATT+TGG - chr2.3:55397925-55397944 None:intergenic 45.0%
ATGCCAAATGGTAAGAGTCC+AGG + chr2.3:55397919-55397938 MS.gene67328:CDS 45.0%
CACACGTCCTACAAAGGATA+AGG - chr2.3:55396809-55396828 None:intergenic 45.0%
CTAGCACAATTTAGGCGGTT+CGG + chr2.3:55398459-55398478 MS.gene67328:intron 45.0%
CTAGGAATTTGGATGCCAAG+AGG + chr2.3:55396380-55396399 MS.gene67328:intron 45.0%
CTATTCATCGGGTGCATGTT+TGG - chr2.3:55398338-55398357 None:intergenic 45.0%
CTTGAGTGTAGCGAGTAGAA+CGG + chr2.3:55396956-55396975 MS.gene67328:intron 45.0%
GACTTTCGCTGCAATTGATC+AGG + chr2.3:55396602-55396621 MS.gene67328:CDS 45.0%
GCCAATGTGACCTACACATA+TGG + chr2.3:55398481-55398500 MS.gene67328:intron 45.0%
GCTCTTGATATTGCTAGTCC+TGG - chr2.3:55397940-55397959 None:intergenic 45.0%
GGGTCAGAAAGGATTCAATC+AGG + chr2.3:55395715-55395734 MS.gene67328:CDS 45.0%
TCGGAATTCAAACCCTGTTG+AGG - chr2.3:55398568-55398587 None:intergenic 45.0%
TGAGAGACATGTTGTGAAGG+GGG - chr2.3:55398964-55398983 None:intergenic 45.0%
TGCGGTGATGAAATCCGAAA+GGG - chr2.3:55396176-55396195 None:intergenic 45.0%
TGTCATCTTGGCAACTGATG+GGG + chr2.3:55398044-55398063 MS.gene67328:CDS 45.0%
TTGCAATTGGCAGGAAAACC+TGG + chr2.3:55396494-55396513 MS.gene67328:CDS 45.0%
TTGCGGTGATGAAATCCGAA+AGG - chr2.3:55396177-55396196 None:intergenic 45.0%
TTTCGATGGACATGGACCTT+GGG + chr2.3:55396422-55396441 MS.gene67328:CDS 45.0%
! CAGGATCTAAAGCAGCATAC+TGG + chr2.3:55396621-55396640 MS.gene67328:CDS 45.0%
! CCGAAAGGGTTTGCTTGAAT+TGG - chr2.3:55396162-55396181 None:intergenic 45.0%
! TGTGGAGTTTTCGATGGACA+TGG + chr2.3:55396414-55396433 MS.gene67328:CDS 45.0%
! TTTTCGATGGACATGGACCT+TGG + chr2.3:55396421-55396440 MS.gene67328:CDS 45.0%
!! ATATATATATATATTTATCT+TGG - chr2.3:55397751-55397770 None:intergenic 5.0%
AAGCCCTTTCCGAATCCGAA+AGG + chr2.3:55396073-55396092 MS.gene67328:intron 50.0%
GTTGTGCACACGTCCTACAA+AGG - chr2.3:55396815-55396834 None:intergenic 50.0%
TATGAGGGTAAGGGTTGCGA+AGG + chr2.3:55397052-55397071 MS.gene67328:intron 50.0%
TCGCCTTTCGGATTCGGAAA+GGG - chr2.3:55396079-55396098 None:intergenic 50.0%
TCTCTGAGCTACGTGTGACT+TGG + chr2.3:55396252-55396271 MS.gene67328:intron 50.0%
TTCGATGGACATGGACCTTG+GGG + chr2.3:55396423-55396442 MS.gene67328:CDS 50.0%
TTCGCCTTTCGGATTCGGAA+AGG - chr2.3:55396080-55396099 None:intergenic 50.0%
! CAGTGTGCCATTCTCTGAAG+TGG - chr2.3:55397530-55397549 None:intergenic 50.0%
!! AAAGTGGGCTGTTCGCCTTT+CGG - chr2.3:55396091-55396110 None:intergenic 50.0%
!! ATAGGTCAGTGATAGTGGGC+AGG - chr2.3:55397013-55397032 None:intergenic 50.0%
!! GGTCAAGTGGTTTTTCAGCC+AGG - chr2.3:55396515-55396534 None:intergenic 50.0%
GGCTGTTCGCCTTTCGGATT+CGG - chr2.3:55396085-55396104 None:intergenic 55.0%


Chromosome Type Strat End Strand Name
chr2.3 gene 55395554 55399005 55395554 ID=MS.gene67328
chr2.3 mRNA 55395554 55399005 55395554 ID=MS.gene67328.t1;Parent=MS.gene67328
chr2.3 exon 55395554 55395757 55395554 ID=MS.gene67328.t1.exon1;Parent=MS.gene67328.t1
chr2.3 CDS 55395554 55395757 55395554 ID=cds.MS.gene67328.t1;Parent=MS.gene67328.t1
chr2.3 exon 55396384 55396692 55396384 ID=MS.gene67328.t1.exon2;Parent=MS.gene67328.t1
chr2.3 CDS 55396384 55396692 55396384 ID=cds.MS.gene67328.t1;Parent=MS.gene67328.t1
chr2.3 exon 55397475 55397592 55397475 ID=MS.gene67328.t1.exon3;Parent=MS.gene67328.t1
chr2.3 CDS 55397475 55397592 55397475 ID=cds.MS.gene67328.t1;Parent=MS.gene67328.t1
chr2.3 exon 55397842 55398065 55397842 ID=MS.gene67328.t1.exon4;Parent=MS.gene67328.t1
chr2.3 CDS 55397842 55398065 55397842 ID=cds.MS.gene67328.t1;Parent=MS.gene67328.t1
chr2.3 exon 55398793 55399005 55398793 ID=MS.gene67328.t1.exon5;Parent=MS.gene67328.t1
chr2.3 CDS 55398793 55399005 55398793 ID=cds.MS.gene67328.t1;Parent=MS.gene67328.t1
Gene Sequence

>MS.gene67328

ATGTCTTTGAACAAAGACAAGAGTTATGGAAAGGATGATGATGCAAGGAAAGTTGTGAAAGCAATGGTAAAGGAAGCAAGAAAGAATGAAATGTTGTTGAATTCATCTGGAATTGTAAAGTCCGACAAGTCCAACAATTTTTCCTGTGTGTTCACTAAAAAGGGTCAGAAAGGATTCAATCAGGATTGTCTAATTGTTTGGGAGGTATGCCTAAATATTCAGTTTCCAAATTTCATTGTCTATGATTTTAGCTCTATTTGGAAGAACAGTTTAATTAAGCGCATATAGCATAAACACTTATTGTTAAGTATTTATGTATAGAATATTTTTATAACAGAAGATAAATGAAGCCAAACTATTTTCACATCAGTTATAAGCTGTTTTCATAAGCTATCCTAGAGAGCTTATGAAAATAACTTGAAAACAGCTTATAGAGATGTTATGTCATAAGCTGTTTCAAATTTCAATAACCCTAGCTGTACTAGAGTAGTTTAGTAGCGCCTTTTGAATCAAATTGGCAAGCCCTTTCCGAATCCGAAAGGCGAACAGCCCACTTTGCAAAACAATATCATAAGTACTTATGTGAGTAGATAAGCTCAAATAAACCAATTCAAGCAAACCCTTTCGGATTTCATCACCGCAAAACTAACTTGTACCGCAAAAATTGCCTAATAATTAAAAATTCTATTCAGCTCTTATCTCTGAGCTACGTGTGACTTGGAATTTGCGCAATATAGTATCTTGTTCTGCATAACTGGGACAAAAACCTTGAAAAGTTTGATTAGCATATAAAATGATATTTATATATTCTACATTGTTTCTGATGCTAGGAATTTGGATGCCAAGAGGACATTATTTTGTGTGGAGTTTTCGATGGACATGGACCTTGGGGACATTTTGTATCGAAAAGGGTCCGAAAAATGCTGCCAACTTTTTTGCTTTGCAATTGGCAGGAAAACCTGGCTGAAAAACCACTTGACCTGAGTTTTAAGATGGAAACAGACATGAATCTCCATATGTATGATATATGGAAGCAGTCCTACATAAAGACTTTCGCTGCAATTGATCAGGATCTAAAGCAGCATACTGGAATTGATTCCTTTCAAAGTGGAACTACAGCTTTGACAGTTGTCAAACAGGTTAATCATCCGTAACATCTGATCTTGTATAGTTGTATCTACAAAAATTGATATTTTGATTACTTCTCTGCTGTATCTTAAAATGGTTTGGTAAAGCGTTCGATATATGCAAACCTTATCCTTTGTAGGACGTGTGCACAACTTGAACTTGTAACCAACAAGAAGGGAGTAACCTTATCATTGTGCAAAGTCAATGAGAATAGAGAAAAAATAAATTATTCATTGTTGAGTATGGATTATATTCACTGATAGGTGGACATATGCTTGAGTGTAGCGAGTAGAACGGAAATCTCACTGAGCATAGCTAGGCGAGAATGCCTGCCCACTATCACTGACCTATTAGTATGTTGAGTTTCAACTATGAGGGTAAGGGTTGCGAAGGTAAACTTGTAATTTGAACAATTTTGTAATCCTAAGTATTGCATAACAAAAAAAGCTACATCAGTCATTATGCTTTTGAAGATGTAGACATAATTAGCCGAACGCTATGATTAATTGTTTGTGATCTTGTATGCATTTATTTATCTGTTTCCTTTAGAGTTAGTCGTTCTCGTGTAGATAGTTAAGTATGTTTTCCTTAAGGCTTGTTGCTGTTACTGTTGTTGTATGCATATTTTCCGTAGCTAGTTTTGAATAAATAGTGAATCAATAACATGTTGATTGATGACATTGCTTGGAAAGGCCATACAATTTTTCTGGGGACATTCTCTACTACTACGACCGTTCTCTACTACTTTTTTGCAAATTAAATGCATCCTAAGTTAGTATTATTGATGTTTCAGGGTGAATATCTCATAATAGCAAATGTTGGTGATTCTAGAGCTGTCTTAGCAACCACTTCAGAGAATGGCACACTGACTCCTATTCAACTTACCACTGACTTGAAGCCAAATTTACCAAGTATATATACTCTCTCTATTTTTACACACCCTCACATAAAGATCTGCATTACACAGTTTTCGATCTCAACCATAAAATTTCAGATTAACATCCGAGATAGCTTTAGACTGATTTTGTTATTGTCTAATTTGAATCATCAAAAATCAAATTAATGGCCAAGATAAATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTAACTGTGTCTTTTATTTGAGTGTTGTTCTTGTTAATTTCAGATGAAGCAGAGCGGATAATGGAATCAAATGGGAGAGTATTTTGTATGGAAGATGAACCAGGAGTATATAGGGTTTGGATGCCAAATGGTAAGAGTCCAGGACTAGCAATATCAAGAGCATTTGGTGATTATTGTGTAAAAGACTTTGGACTAATCTCAGTACCAGATGTGACACAAAGAAAACTCACTACTATGGATCAATTTGTCATCTTGGCAACTGATGGGGTATGCATCTTATTTCCTTTCACATTTCAATGACTTAATTTATATTTATCGTTTTTCGAAGGAAAAAAAATGGAAAGAAAAAGTATTTAAAACTTGAAATGAAAATGTTTCGTAAACACAGGAAATTGTTGAAACCGACTCAATGCATATTTGGATTGATGGTGAGTTTGATAGAATCATGTTGTGACATCGTAATGTTAACAAAAGCTACATTTTGGAGCTTCGACAAAATCATTTTCTACCGTGATATTATCAAACTAATTGTGGTTCCAAACATGCACCCGATGAATAGAGTTATACATGCTAGGTTGGTTAAGTGGCAATGAAATGATATTAGAGTGAGCATATCATTAGGTCATGTGATCGTTTAGAGGAAAGAAAATAAACCAAATTCTAGCACAATTTAGGCGGTTCGGCCAATGTGACCTACACATATGGATGATCAAAGACTATTTTTTAATAGACAAGTGTTACTATATTAATTATGTTAGTATTTTCTCCTCAACAGGGTTTGAATTCCGATATTTTAACTCTTTGACCTTTAGTTCAAACGAGTTGAGATGCTCAACCCTCGATCAAACTGTTTCTTATTTCTTTGGGGAGAACAAACATAGTGATTTTTAGTAATTCACGATGATACAATGAGCAATCCTATTCCTCCTATTAACATAATTGAAGGCATCAAAATATGAAATTGTTGATGTAATTTCTGCTTGTTTCATCTCAGGTATGGGATGTTATATCCAACCAAGCAGCTATGAAAATTGTTGCTTCAACACTAAATAGAGAAAAAGCAGCTGATAGGCTAGTAAAATGTGCCACACATGAATGGAAACTTAAGAGAAAAGGCATTGCAATTGATGATATATCAGCTATTTGTCTCTTCTTTCACTCTCCCCCTTCACAACATGTCTCTCAAACCACAAAAGTTGTTGAATAA
Protein sequence

>MS.gene67328.t1

MSLNKDKSYGKDDDARKVVKAMVKEARKNEMLLNSSGIVKSDKSNNFSCVFTKKGQKGFNQDCLIVWEEFGCQEDIILCGVFDGHGPWGHFVSKRVRKMLPTFLLCNWQENLAEKPLDLSFKMETDMNLHMYDIWKQSYIKTFAAIDQDLKQHTGIDSFQSGTTALTVVKQGEYLIIANVGDSRAVLATTSENGTLTPIQLTTDLKPNLPNEAERIMESNGRVFCMEDEPGVYRVWMPNGKSPGLAISRAFGDYCVKDFGLISVPDVTQRKLTTMDQFVILATDGVWDVISNQAAMKIVASTLNREKAADRLVKCATHEWKLKRKGIAIDDISAICLFFHSPPSQHVSQTTKVVE