Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67470.t1 | XP_003612212.1 | 98.7 | 374 | 5 | 0 | 1 | 374 | 67 | 440 | 2.50E-210 | 741.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67470.t1 | U3KRF2 | 86.4 | 374 | 51 | 0 | 1 | 374 | 69 | 442 | 3.9e-188 | 658.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67470.t1 | G7JXJ9 | 98.7 | 374 | 5 | 0 | 1 | 374 | 67 | 440 | 1.8e-210 | 741.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene06894 | MS.gene67470 | PPI |
| MS.gene06683 | MS.gene67470 | PPI |
| MS.gene057128 | MS.gene67470 | PPI |
| MS.gene013566 | MS.gene67470 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67470.t1 | MTR_5g022580 | 98.663 | 374 | 5 | 0 | 1 | 374 | 67 | 440 | 0.0 | 763 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67470.t1 | AT5G66120 | 85.359 | 362 | 53 | 0 | 13 | 374 | 78 | 439 | 0.0 | 655 |
| MS.gene67470.t1 | AT5G66120 | 86.186 | 333 | 46 | 0 | 42 | 374 | 3 | 335 | 0.0 | 606 |
Find 105 sgRNAs with CRISPR-Local
Find 387 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAACCCTGATCCGATATAAA+TGG | 0.217921 | 5.1:-13541534 | None:intergenic |
| TTTGCAGAAGTTATAAAGTA+TGG | 0.237109 | 5.1:+13543199 | MS.gene67470:CDS |
| AGTCAGGGCTACATTGAATT+TGG | 0.243315 | 5.1:+13543908 | MS.gene67470:CDS |
| CACCATTGTTAACGTTGATT+TGG | 0.244416 | 5.1:+13541496 | MS.gene67470:CDS |
| TTATAAAGTATGGGCTCATT+AGG | 0.291558 | 5.1:+13543209 | MS.gene67470:CDS |
| TTGAGACTTATCCTTCTAAA+AGG | 0.299398 | 5.1:+13546117 | MS.gene67470:CDS |
| TTGAATTTGGGTCATACATT+TGG | 0.323104 | 5.1:+13543921 | MS.gene67470:CDS |
| ATAGCATATGCCAGTGCATT+AGG | 0.327626 | 5.1:-13543828 | None:intergenic |
| TCTTCAGTTGGTGGCAAAAC+TGG | 0.330298 | 5.1:+13543064 | MS.gene67470:CDS |
| ACACTCTCAACAGAAACATT+TGG | 0.341474 | 5.1:-13542600 | None:intergenic |
| CACTCTCAACAGAAACATTT+GGG | 0.343857 | 5.1:-13542599 | None:intergenic |
| ACCATTGTTAACGTTGATTT+GGG | 0.350396 | 5.1:+13541497 | MS.gene67470:CDS |
| ATGTCCACAGTCATCATTTC+AGG | 0.366546 | 5.1:-13545961 | None:intergenic |
| TCAGATTCCAACCACTGTTA+TGG | 0.372653 | 5.1:+13542888 | MS.gene67470:CDS |
| ATGAGAGAGAAGGTGGAGTC+AGG | 0.374462 | 5.1:+13543892 | MS.gene67470:CDS |
| TTAACGTTGATTTGGGTAAT+CGG | 0.380324 | 5.1:+13541504 | MS.gene67470:CDS |
| CAAGGCCGAGGTTGTGTCCT+TGG | 0.381716 | 5.1:+13543869 | MS.gene67470:CDS |
| GCCCTTGGAGGTGGTGTGAT+TGG | 0.385690 | 5.1:+13542814 | MS.gene67470:CDS |
| TATCCCATTTATATCGGATC+AGG | 0.386598 | 5.1:+13541530 | MS.gene67470:CDS |
| CATGGAGAGGCTGTTGCAGC+TGG | 0.391153 | 5.1:+13545744 | MS.gene67470:CDS |
| ATCATTTCAGGAGGCACAAT+TGG | 0.396114 | 5.1:-13545949 | None:intergenic |
| CCAGAGAGGGAACTGGCATC+AGG | 0.397934 | 5.1:+13543175 | MS.gene67470:CDS |
| GTCAGGGCTACATTGAATTT+GGG | 0.399767 | 5.1:+13543909 | MS.gene67470:CDS |
| CGGAGCTATCCCATTTATAT+CGG | 0.402539 | 5.1:+13541524 | MS.gene67470:CDS |
| GGCTATGGGCAGTGGCTTCA+TGG | 0.408977 | 5.1:+13545726 | MS.gene67470:CDS |
| CCGTAGTGTTAGTGACAATA+AGG | 0.430212 | 5.1:-13542527 | None:intergenic |
| CCCCTTGGGAAGAACTTGAT+TGG | 0.431232 | 5.1:+13543097 | MS.gene67470:CDS |
| AATTACCTTTGAAGAAGTTC+AGG | 0.444038 | 5.1:-13541566 | None:intergenic |
| CCTGATGCCAGTTCCCTCTC+TGG | 0.447867 | 5.1:-13543175 | None:intergenic |
| TATAAAGTATGGGCTCATTA+GGG | 0.460868 | 5.1:+13543210 | MS.gene67470:CDS |
| AACCCTGATCCGATATAAAT+GGG | 0.471338 | 5.1:-13541533 | None:intergenic |
| ATAGAAACTAGCGTTGGCTA+TGG | 0.484418 | 5.1:+13545711 | MS.gene67470:CDS |
| TCCTTGTACTGCTCACCATC+CGG | 0.486431 | 5.1:-13542630 | None:intergenic |
| TGAGAGAGAAGGTGGAGTCA+GGG | 0.489001 | 5.1:+13543893 | MS.gene67470:CDS |
| GGTATATCAGGTTGATAAGA+AGG | 0.492255 | 5.1:+13546080 | MS.gene67470:intron |
| TAGGTTGATTCTTCAGTTGG+TGG | 0.498341 | 5.1:+13543055 | MS.gene67470:intron |
| CAAGGCCATTGAGTCTCGAT+TGG | 0.499244 | 5.1:+13542771 | MS.gene67470:CDS |
| GTTGTTGATGCTTTAACAAG+TGG | 0.499540 | 5.1:+13542573 | MS.gene67470:CDS |
| AAATCAACGTTAACAATGGT+GGG | 0.500362 | 5.1:-13541494 | None:intergenic |
| CAATAAGGACCTTCTTTCCA+TGG | 0.505079 | 5.1:-13542512 | None:intergenic |
| CTAGCGTTGGCTATGGGCAG+TGG | 0.507771 | 5.1:+13545718 | MS.gene67470:CDS |
| ATATGCAGGCATTAATGGCC+AGG | 0.511276 | 5.1:+13543263 | MS.gene67470:CDS |
| TTGTAGGTTGATTCTTCAGT+TGG | 0.512666 | 5.1:+13543052 | MS.gene67470:intron |
| CCGATCCAATCGAGACTCAA+TGG | 0.515263 | 5.1:-13542776 | None:intergenic |
| ATCCTTCTAAAAGGTTCTCT+AGG | 0.515459 | 5.1:+13546126 | MS.gene67470:CDS |
| TTGCAGAAGTTATAAAGTAT+GGG | 0.520923 | 5.1:+13543200 | MS.gene67470:CDS |
| CTGGTATAAACCATCCCCTT+GGG | 0.525333 | 5.1:+13543083 | MS.gene67470:CDS |
| TACATTACCAGAGAGGGAAC+TGG | 0.528745 | 5.1:+13543168 | MS.gene67470:CDS |
| TTAACAATGGTGGGGACACC+AGG | 0.531488 | 5.1:-13541485 | None:intergenic |
| ACCTGTGCCATAACAGTGGT+TGG | 0.531757 | 5.1:-13542895 | None:intergenic |
| ACCGGATGGTGAGCAGTACA+AGG | 0.533496 | 5.1:+13542629 | MS.gene67470:CDS |
| CAAATCAACGTTAACAATGG+TGG | 0.540010 | 5.1:-13541495 | None:intergenic |
| ACATGTCATACCGCCTCGGT+TGG | 0.540345 | 5.1:+13545872 | MS.gene67470:CDS |
| TCAAGTTCTTCCCAAGGGGA+TGG | 0.545666 | 5.1:-13543093 | None:intergenic |
| CGCCAATCACACCACCTCCA+AGG | 0.548112 | 5.1:-13542816 | None:intergenic |
| TAGGCATGTCCATGGAAAGA+AGG | 0.549371 | 5.1:+13542503 | MS.gene67470:intron |
| TAGAAACTAGCGTTGGCTAT+GGG | 0.550835 | 5.1:+13545712 | MS.gene67470:CDS |
| TGGGCAGTGGCTTCATGGAG+AGG | 0.553068 | 5.1:+13545731 | MS.gene67470:CDS |
| TATAATAATAGGCATGTCCA+TGG | 0.555537 | 5.1:+13542495 | MS.gene67470:intron |
| CACGGGAGAATATGACAGAA+AGG | 0.557955 | 5.1:+13546161 | MS.gene67470:CDS |
| TTGCAGAGATCCTAATGCAC+TGG | 0.562804 | 5.1:+13543818 | MS.gene67470:intron |
| ACTGGTATAAACCATCCCCT+TGG | 0.563182 | 5.1:+13543082 | MS.gene67470:CDS |
| ATAAACCTGAACTTCTTCAA+AGG | 0.564077 | 5.1:+13541561 | MS.gene67470:CDS |
| TCCAACCACTGTTATGGCAC+AGG | 0.567423 | 5.1:+13542894 | MS.gene67470:CDS |
| CAATGGTGGGGACACCAGGT+TGG | 0.572157 | 5.1:-13541481 | None:intergenic |
| ACCAATCAAGTTCTTCCCAA+GGG | 0.573622 | 5.1:-13543098 | None:intergenic |
| CACCAATCAAGTTCTTCCCA+AGG | 0.573892 | 5.1:-13543099 | None:intergenic |
| CAGAGAGGGAACTGGCATCA+GGG | 0.581095 | 5.1:+13543176 | MS.gene67470:CDS |
| GCCAATCACACCACCTCCAA+GGG | 0.583987 | 5.1:-13542815 | None:intergenic |
| ATCCCATTTATATCGGATCA+GGG | 0.585337 | 5.1:+13541531 | MS.gene67470:CDS |
| CTATAAGCACACATTGAGGT+TGG | 0.590057 | 5.1:-13543129 | None:intergenic |
| CCTTATTGTCACTAACACTA+CGG | 0.592911 | 5.1:+13542527 | MS.gene67470:CDS |
| GTTGATAAGAAGGTAGCAGA+TGG | 0.593067 | 5.1:+13546090 | MS.gene67470:CDS |
| TGCACCTTTGTATCTAGACA+AGG | 0.596590 | 5.1:+13542551 | MS.gene67470:CDS |
| GTTGACATGTCATACCGCCT+CGG | 0.604970 | 5.1:+13545868 | MS.gene67470:CDS |
| AGAGGCTGTTGCAGCTGGCA+CGG | 0.606315 | 5.1:+13545749 | MS.gene67470:CDS |
| TCCACCTTCTCTCTCATCCA+AGG | 0.607242 | 5.1:-13543886 | None:intergenic |
| ATTAGATACATTACCAGAGA+GGG | 0.613639 | 5.1:+13543162 | MS.gene67470:CDS |
| ATCATGTGAAAACAAGGCCG+AGG | 0.615090 | 5.1:+13543857 | MS.gene67470:CDS |
| TTGAGTCTCGATTGGATCGG+CGG | 0.622236 | 5.1:+13542779 | MS.gene67470:CDS |
| ACCCAAATCAACGTTAACAA+TGG | 0.628458 | 5.1:-13541498 | None:intergenic |
| CTCATCCAAGGACACAACCT+CGG | 0.631144 | 5.1:-13543874 | None:intergenic |
| ACAACCTTGTCTAGATACAA+AGG | 0.633531 | 5.1:-13542555 | None:intergenic |
| AATCAACGTTAACAATGGTG+GGG | 0.636830 | 5.1:-13541493 | None:intergenic |
| GGACATGTTTAAATCTGTCA+TGG | 0.638172 | 5.1:+13545978 | MS.gene67470:CDS |
| TAGGCAATAGAAACTAGCGT+TGG | 0.642948 | 5.1:+13545705 | MS.gene67470:intron |
| AAAGCGATCATGTGAAAACA+AGG | 0.643424 | 5.1:+13543851 | MS.gene67470:CDS |
| TCCTTGGATGAGAGAGAAGG+TGG | 0.653001 | 5.1:+13543885 | MS.gene67470:CDS |
| AACACCACGTAGGAATGAAG+CGG | 0.653409 | 5.1:-13542857 | None:intergenic |
| TGGTGAGCAGTACAAGGACA+TGG | 0.659373 | 5.1:+13542635 | MS.gene67470:CDS |
| TCCACAGTCATCATTTCAGG+AGG | 0.661026 | 5.1:-13545958 | None:intergenic |
| CCATTGAGTCTCGATTGGAT+CGG | 0.669888 | 5.1:+13542776 | MS.gene67470:CDS |
| GGTGTGATTGGCGACATGTG+TGG | 0.672916 | 5.1:+13542826 | MS.gene67470:CDS |
| GTGTCCTTGGATGAGAGAGA+AGG | 0.674887 | 5.1:+13543882 | MS.gene67470:CDS |
| CCAATCAAGTTCTTCCCAAG+GGG | 0.683553 | 5.1:-13543097 | None:intergenic |
| TAAGACCTGTGCCATAACAG+TGG | 0.688059 | 5.1:-13542899 | None:intergenic |
| GTGTCTATAAGCACACATTG+AGG | 0.695429 | 5.1:-13543133 | None:intergenic |
| TCTTATGAAAGTGTTTGACA+AGG | 0.696371 | 5.1:+13542753 | MS.gene67470:CDS |
| GCCTCCTGAAATGATGACTG+TGG | 0.699500 | 5.1:+13545957 | MS.gene67470:CDS |
| CATTAGATACATTACCAGAG+AGG | 0.702812 | 5.1:+13543161 | MS.gene67470:CDS |
| GAATAAAATTAACACCACGT+AGG | 0.705762 | 5.1:-13542867 | None:intergenic |
| TAGAATCATCAATCCAACCG+AGG | 0.718923 | 5.1:-13545885 | None:intergenic |
| CATGTTTAAATCTGTCATGG+CGG | 0.724496 | 5.1:+13545981 | MS.gene67470:CDS |
| GCTGCCGCTTCATTCCTACG+TGG | 0.729031 | 5.1:+13542853 | MS.gene67470:CDS |
| AATCATCAATCCAACCGAGG+CGG | 0.730486 | 5.1:-13545882 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTAAATTTATAGACAAA+TGG | + | chr5.1:13541972-13541991 | MS.gene67470:intron | 10.0% |
| !! | TATTTCATGTTTATAATAAT+AGG | + | chr5.1:13542484-13542503 | MS.gene67470:intron | 10.0% |
| !! | TCAATTTAATAAATATTAGA+TGG | + | chr5.1:13544121-13544140 | MS.gene67470:intron | 10.0% |
| !! | TTAAAAGAAAATTAAAATAG+GGG | + | chr5.1:13543509-13543528 | MS.gene67470:intron | 10.0% |
| !! | TTACTGTTTATTATATTATT+TGG | + | chr5.1:13543958-13543977 | MS.gene67470:intron | 10.0% |
| !!! | TTTTAAAAACATATATAAGT+AGG | - | chr5.1:13545541-13545560 | None:intergenic | 10.0% |
| !! | AATACAAAATTCAATGAATA+TGG | - | chr5.1:13543028-13543047 | None:intergenic | 15.0% |
| !!! | GATATTATTGAAGATATTTT+AGG | + | chr5.1:13541765-13541784 | MS.gene67470:intron | 15.0% |
| !!! | TTTTTTTTTTTTTGAAGTTG+TGG | + | chr5.1:13542220-13542239 | MS.gene67470:intron | 15.0% |
| !! | AAACTATGATGATTATGAAA+AGG | - | chr5.1:13542199-13542218 | None:intergenic | 20.0% |
| !! | AAATATGTAACATGATGATT+AGG | + | chr5.1:13542245-13542264 | MS.gene67470:intron | 20.0% |
| !! | AAATTCAATGAATATGGAAA+AGG | - | chr5.1:13543022-13543041 | None:intergenic | 20.0% |
| !! | AATATGTAACATGATGATTA+GGG | + | chr5.1:13542246-13542265 | MS.gene67470:intron | 20.0% |
| !! | AATTCAATGAATATGGAAAA+GGG | - | chr5.1:13543021-13543040 | None:intergenic | 20.0% |
| !! | ATAGTCAATTTAATCAAACA+TGG | + | chr5.1:13544176-13544195 | MS.gene67470:intron | 20.0% |
| !! | ATCACATTAATTAAGAAAGT+TGG | + | chr5.1:13541944-13541963 | MS.gene67470:intron | 20.0% |
| !! | GACTAAAAGTTCATTTATAT+TGG | + | chr5.1:13546059-13546078 | MS.gene67470:intron | 20.0% |
| !! | TAATACTAATCATCAAACAT+AGG | - | chr5.1:13541645-13541664 | None:intergenic | 20.0% |
| !! | TATCTTCAATAATATCTACA+TGG | - | chr5.1:13541761-13541780 | None:intergenic | 20.0% |
| !! | TTCATTTATATTGGTATATC+AGG | + | chr5.1:13546068-13546087 | MS.gene67470:intron | 20.0% |
| !!! | AAATCTATCTTTTGAAAAAG+GGG | - | chr5.1:13545020-13545039 | None:intergenic | 20.0% |
| !!! | ACGTTCTCAATTTTTAATTA+AGG | + | chr5.1:13541692-13541711 | MS.gene67470:intron | 20.0% |
| !!! | AGAAATCTATCTTTTGAAAA+AGG | - | chr5.1:13545022-13545041 | None:intergenic | 20.0% |
| !!! | ATTTTCCTTATTCTAACATT+TGG | - | chr5.1:13545418-13545437 | None:intergenic | 20.0% |
| !!! | GAAATCTATCTTTTGAAAAA+GGG | - | chr5.1:13545021-13545040 | None:intergenic | 20.0% |
| !!! | GAATTTTGTATTATGTTTGT+AGG | + | chr5.1:13543036-13543055 | MS.gene67470:intron | 20.0% |
| !!! | GATTTAAGTTGTATACTTTT+AGG | + | chr5.1:13541714-13541733 | MS.gene67470:intron | 20.0% |
| !!! | GTAAAAGCAATTTTATTGAT+GGG | + | chr5.1:13544228-13544247 | MS.gene67470:intron | 20.0% |
| !!! | TCTTTATTTTGTGTTTGAAT+TGG | + | chr5.1:13542662-13542681 | MS.gene67470:intron | 20.0% |
| !!! | TGTAAAAGCAATTTTATTGA+TGG | + | chr5.1:13544227-13544246 | MS.gene67470:intron | 20.0% |
| !!! | TTCCAACTTTTACAAATTAT+CGG | + | chr5.1:13543789-13543808 | MS.gene67470:intron | 20.0% |
| ! | AAAGACAATATAACACGAAA+TGG | - | chr5.1:13545498-13545517 | None:intergenic | 25.0% |
| ! | AAGACAATATAACACGAAAT+GGG | - | chr5.1:13545497-13545516 | None:intergenic | 25.0% |
| ! | AGATAGACAAACAAGAAATA+CGG | - | chr5.1:13543721-13543740 | None:intergenic | 25.0% |
| ! | ATATGTAACATGATGATTAG+GGG | + | chr5.1:13542247-13542266 | MS.gene67470:intron | 25.0% |
| ! | CAAACAAGGTTCTATATTTA+GGG | - | chr5.1:13541919-13541938 | None:intergenic | 25.0% |
| ! | GCTCATTGAAATCATAAAAT+CGG | + | chr5.1:13545354-13545373 | MS.gene67470:intron | 25.0% |
| ! | GTATGAAATATTTATAACCC+AGG | + | chr5.1:13544023-13544042 | MS.gene67470:intron | 25.0% |
| ! | GTATTATACAATTTACGTAG+TGG | + | chr5.1:13542376-13542395 | MS.gene67470:intron | 25.0% |
| ! | TAATGTGATTTAGTCAAACA+AGG | - | chr5.1:13541933-13541952 | None:intergenic | 25.0% |
| ! | TACACTGTTACATATTACTT+GGG | + | chr5.1:13543358-13543377 | MS.gene67470:intron | 25.0% |
| ! | TAGTTTCTATTGCCTAAAAA+AGG | - | chr5.1:13545701-13545720 | None:intergenic | 25.0% |
| ! | TCAAACAAGGTTCTATATTT+AGG | - | chr5.1:13541920-13541939 | None:intergenic | 25.0% |
| ! | TTACACTGTTACATATTACT+TGG | + | chr5.1:13543357-13543376 | MS.gene67470:intron | 25.0% |
| ! | TTCATACATCAAGAAAGAAA+AGG | - | chr5.1:13544010-13544029 | None:intergenic | 25.0% |
| ! | TTGCAGAAGTTATAAAGTAT+GGG | + | chr5.1:13543200-13543219 | MS.gene67470:CDS | 25.0% |
| ! | TTTGCAGAAGTTATAAAGTA+TGG | + | chr5.1:13543199-13543218 | MS.gene67470:CDS | 25.0% |
| ! | TTTGTGTTTATTTACACTCT+TGG | + | chr5.1:13542688-13542707 | MS.gene67470:intron | 25.0% |
| !! | AATTTTATGTCAATGTTCAC+AGG | + | chr5.1:13545837-13545856 | MS.gene67470:intron | 25.0% |
| !! | AGAGTAATAGAGCATTATAA+AGG | - | chr5.1:13543770-13543789 | None:intergenic | 25.0% |
| !! | ATTTATCTTTTATCTCTGGT+AGG | - | chr5.1:13544323-13544342 | None:intergenic | 25.0% |
| !! | TACGAAAATGGTATAGTTTT+AGG | - | chr5.1:13543668-13543687 | None:intergenic | 25.0% |
| !!! | AGTTAGTGACATTTTAAAAC+AGG | + | chr5.1:13545918-13545937 | MS.gene67470:CDS | 25.0% |
| !!! | CTTTTAAAAAACTGTAGTAG+TGG | - | chr5.1:13543496-13543515 | None:intergenic | 25.0% |
| !!! | GATTTTAATGTTCTTTCTCA+TGG | + | chr5.1:13545673-13545692 | MS.gene67470:intron | 25.0% |
| !!! | TAACAAGTTTTCAAGAGAAT+TGG | + | chr5.1:13542002-13542021 | MS.gene67470:intron | 25.0% |
| !!! | TACATTTGTTTCTATTCTGA+GGG | + | chr5.1:13545813-13545832 | MS.gene67470:intron | 25.0% |
| !!! | TTACATTTGTTTCTATTCTG+AGG | + | chr5.1:13545812-13545831 | MS.gene67470:intron | 25.0% |
| AAACAGTAAAACTACTCACA+TGG | - | chr5.1:13543947-13543966 | None:intergenic | 30.0% | |
| AAATCAACGTTAACAATGGT+GGG | - | chr5.1:13541497-13541516 | None:intergenic | 30.0% | |
| AGAAGGATAAATCAGAAGTT+AGG | - | chr5.1:13544950-13544969 | None:intergenic | 30.0% | |
| AGAATTAGTTACAATTGGTG+AGG | - | chr5.1:13544448-13544467 | None:intergenic | 30.0% | |
| AGACAATATAACACGAAATG+GGG | - | chr5.1:13545496-13545515 | None:intergenic | 30.0% | |
| AGACATACAAATGTATAACC+TGG | - | chr5.1:13544044-13544063 | None:intergenic | 30.0% | |
| AGGGAAGAATTAGTTACAAT+TGG | - | chr5.1:13544453-13544472 | None:intergenic | 30.0% | |
| AGTAGGACACTATACAATTA+GGG | - | chr5.1:13542415-13542434 | None:intergenic | 30.0% | |
| ATAAACCTGAACTTCTTCAA+AGG | + | chr5.1:13541561-13541580 | MS.gene67470:CDS | 30.0% | |
| ATAAGTAGGCTGAGAAATTA+TGG | - | chr5.1:13545527-13545546 | None:intergenic | 30.0% | |
| ATGCTCCAAATGTTAGAATA+AGG | + | chr5.1:13545410-13545429 | MS.gene67470:intron | 30.0% | |
| ATGGTCAGCATATTAAACAA+TGG | - | chr5.1:13544700-13544719 | None:intergenic | 30.0% | |
| ATGTACAGATACTACGAAAA+TGG | - | chr5.1:13543680-13543699 | None:intergenic | 30.0% | |
| ATTAGATACATTACCAGAGA+GGG | + | chr5.1:13543162-13543181 | MS.gene67470:CDS | 30.0% | |
| CATGTAATGTGAAGTCAAAA+AGG | - | chr5.1:13543422-13543441 | None:intergenic | 30.0% | |
| CCAAGAAAAGGAATAACAAA+GGG | + | chr5.1:13544276-13544295 | MS.gene67470:intron | 30.0% | |
| CCATATATCTCAGCTTAAAA+AGG | - | chr5.1:13544831-13544850 | None:intergenic | 30.0% | |
| GAAAAATATGCAGGCATTAA+TGG | + | chr5.1:13543258-13543277 | MS.gene67470:CDS | 30.0% | |
| GAAGGATAAATCAGAAGTTA+GGG | - | chr5.1:13544949-13544968 | None:intergenic | 30.0% | |
| GAATAAAATTAACACCACGT+AGG | - | chr5.1:13542870-13542889 | None:intergenic | 30.0% | |
| GACATACAAATGTATAACCT+GGG | - | chr5.1:13544043-13544062 | None:intergenic | 30.0% | |
| GCTTAAACAACATTCATTGA+AGG | - | chr5.1:13545083-13545102 | None:intergenic | 30.0% | |
| TAAGTAGGCTGAGAAATTAT+GGG | - | chr5.1:13545526-13545545 | None:intergenic | 30.0% | |
| TATAAAGTATGGGCTCATTA+GGG | + | chr5.1:13543210-13543229 | MS.gene67470:CDS | 30.0% | |
| TATAAATTACAACTGCCTGA+GGG | - | chr5.1:13544875-13544894 | None:intergenic | 30.0% | |
| TATAATAATAGGCATGTCCA+TGG | + | chr5.1:13542495-13542514 | MS.gene67470:intron | 30.0% | |
| TCAGCATATTAAACAATGGA+TGG | - | chr5.1:13544696-13544715 | None:intergenic | 30.0% | |
| TCTACATGGTGCAATTTAAT+TGG | - | chr5.1:13541747-13541766 | None:intergenic | 30.0% | |
| TTATAAAGTATGGGCTCATT+AGG | + | chr5.1:13543209-13543228 | MS.gene67470:CDS | 30.0% | |
| TTGAATTTGGGTCATACATT+TGG | + | chr5.1:13543921-13543940 | MS.gene67470:CDS | 30.0% | |
| TTGAGACTTATCCTTCTAAA+AGG | + | chr5.1:13546117-13546136 | MS.gene67470:CDS | 30.0% | |
| ! | AAATTGCTACTTAAAGCGAA+AGG | - | chr5.1:13542176-13542195 | None:intergenic | 30.0% |
| ! | AAGATAGATTTCTCCTTTTC+CGG | + | chr5.1:13545029-13545048 | MS.gene67470:intron | 30.0% |
| ! | AATTACCTTTGAAGAAGTTC+AGG | - | chr5.1:13541569-13541588 | None:intergenic | 30.0% |
| ! | ACTCAAAGTAAGATTTTACC+TGG | - | chr5.1:13543284-13543303 | None:intergenic | 30.0% |
| ! | ATCATAAAATCGGCGATTTT+TGG | + | chr5.1:13545364-13545383 | MS.gene67470:intron | 30.0% |
| ! | GGAGATTTATCTTTTATCTC+TGG | - | chr5.1:13544327-13544346 | None:intergenic | 30.0% |
| ! | GTGAGGATTATTCATGTTTT+GGG | - | chr5.1:13544365-13544384 | None:intergenic | 30.0% |
| ! | TAGAGCATTATAAAGGCAAT+TGG | - | chr5.1:13543763-13543782 | None:intergenic | 30.0% |
| ! | TCTAGGAAATTGTGTTTTCA+CGG | + | chr5.1:13546143-13546162 | MS.gene67470:CDS | 30.0% |
| ! | TGCCGATAATTTGTAAAAGT+TGG | - | chr5.1:13543794-13543813 | None:intergenic | 30.0% |
| ! | TGTGAGGATTATTCATGTTT+TGG | - | chr5.1:13544366-13544385 | None:intergenic | 30.0% |
| ! | TTACTTGGGAAATGTACTTT+TGG | + | chr5.1:13543372-13543391 | MS.gene67470:intron | 30.0% |
| !! | ACCATTGTTAACGTTGATTT+GGG | + | chr5.1:13541497-13541516 | MS.gene67470:CDS | 30.0% |
| !! | ATCTTTTGAAAAAGGGGAAT+GGG | - | chr5.1:13545014-13545033 | None:intergenic | 30.0% |
| !! | CCTTTTTAAGCTGAGATATA+TGG | + | chr5.1:13544828-13544847 | MS.gene67470:intron | 30.0% |
| !! | GCGATTTTTGGATTTACATT+GGG | + | chr5.1:13545376-13545395 | MS.gene67470:intron | 30.0% |
| !! | TATCTTTTGAAAAAGGGGAA+TGG | - | chr5.1:13545015-13545034 | None:intergenic | 30.0% |
| !! | TCTTATGAAAGTGTTTGACA+AGG | + | chr5.1:13542753-13542772 | MS.gene67470:CDS | 30.0% |
| !! | TGTTGAGAGTGTAATTTTAC+CGG | + | chr5.1:13542611-13542630 | MS.gene67470:CDS | 30.0% |
| !! | TTAACGTTGATTTGGGTAAT+CGG | + | chr5.1:13541504-13541523 | MS.gene67470:CDS | 30.0% |
| !!! | ACACCTTTTGAAACTGTTTA+TGG | - | chr5.1:13545202-13545221 | None:intergenic | 30.0% |
| !!! | CACCTTTTGAAACTGTTTAT+GGG | - | chr5.1:13545201-13545220 | None:intergenic | 30.0% |
| !!! | CCTTTGTTATTCCTTTTCTT+GGG | - | chr5.1:13544278-13544297 | None:intergenic | 30.0% |
| !!! | CTTTGTTATTCCTTTTCTTG+GGG | - | chr5.1:13544277-13544296 | None:intergenic | 30.0% |
| AAAGCGATCATGTGAAAACA+AGG | + | chr5.1:13543851-13543870 | MS.gene67470:CDS | 35.0% | |
| AACCCTGATCCGATATAAAT+GGG | - | chr5.1:13541536-13541555 | None:intergenic | 35.0% | |
| AAGTAGGCTGAGAAATTATG+GGG | - | chr5.1:13545525-13545544 | None:intergenic | 35.0% | |
| AATCAACGTTAACAATGGTG+GGG | - | chr5.1:13541496-13541515 | None:intergenic | 35.0% | |
| ACAACCTTGTCTAGATACAA+AGG | - | chr5.1:13542558-13542577 | None:intergenic | 35.0% | |
| ACACTCTCAACAGAAACATT+TGG | - | chr5.1:13542603-13542622 | None:intergenic | 35.0% | |
| ACATGGAAGAAGCTAGTAAT+AGG | - | chr5.1:13543334-13543353 | None:intergenic | 35.0% | |
| ACCCAAATCAACGTTAACAA+TGG | - | chr5.1:13541501-13541520 | None:intergenic | 35.0% | |
| AGACGAGAAAAAATCTCAAG+AGG | + | chr5.1:13542329-13542348 | MS.gene67470:intron | 35.0% | |
| AGCTGAGATATATGGAAAAC+CGG | + | chr5.1:13544836-13544855 | MS.gene67470:intron | 35.0% | |
| ATACAATTAGGGATGGCAAA+AGG | - | chr5.1:13542404-13542423 | None:intergenic | 35.0% | |
| ATCATGAGGTAGTTTCTTGT+GGG | + | chr5.1:13542104-13542123 | MS.gene67470:intron | 35.0% | |
| ATCCCATTTATATCGGATCA+GGG | + | chr5.1:13541531-13541550 | MS.gene67470:CDS | 35.0% | |
| ATGTAACAGTGTAACAGACA+TGG | - | chr5.1:13543351-13543370 | None:intergenic | 35.0% | |
| ATGTCAATGTTCACAGGTAA+TGG | + | chr5.1:13545843-13545862 | MS.gene67470:intron | 35.0% | |
| ATTAGTTACAATTGGTGAGG+TGG | - | chr5.1:13544445-13544464 | None:intergenic | 35.0% | |
| ATTCTATGCACAATCTGGAT+CGG | + | chr5.1:13545327-13545346 | MS.gene67470:intron | 35.0% | |
| CAAATCAACGTTAACAATGG+TGG | - | chr5.1:13541498-13541517 | None:intergenic | 35.0% | |
| CAAGGTTCTATATTTAGGGA+TGG | - | chr5.1:13541915-13541934 | None:intergenic | 35.0% | |
| CACTCTCAACAGAAACATTT+GGG | - | chr5.1:13542602-13542621 | None:intergenic | 35.0% | |
| CATGTTTAAATCTGTCATGG+CGG | + | chr5.1:13545981-13546000 | MS.gene67470:CDS | 35.0% | |
| CATTAGATACATTACCAGAG+AGG | + | chr5.1:13543161-13543180 | MS.gene67470:CDS | 35.0% | |
| CATTGTAATGCCACTCTTAT+AGG | - | chr5.1:13541797-13541816 | None:intergenic | 35.0% | |
| CCCAAGAAAAGGAATAACAA+AGG | + | chr5.1:13544275-13544294 | MS.gene67470:intron | 35.0% | |
| CCTTATTGTCACTAACACTA+CGG | + | chr5.1:13542527-13542546 | MS.gene67470:CDS | 35.0% | |
| CTCAGCTTAAAAAGGCTATA+GGG | - | chr5.1:13544823-13544842 | None:intergenic | 35.0% | |
| CTCCCATAAACAGTTTCAAA+AGG | + | chr5.1:13545196-13545215 | MS.gene67470:intron | 35.0% | |
| CTGATTTATCCTTCTTGCTA+TGG | + | chr5.1:13544955-13544974 | MS.gene67470:intron | 35.0% | |
| GAGTAGGACACTATACAATT+AGG | - | chr5.1:13542416-13542435 | None:intergenic | 35.0% | |
| GGACATGTTTAAATCTGTCA+TGG | + | chr5.1:13545978-13545997 | MS.gene67470:CDS | 35.0% | |
| GTAAAAAAGCTTTACACCGA+CGG | + | chr5.1:13541837-13541856 | MS.gene67470:intron | 35.0% | |
| GTATAAATTACAACTGCCTG+AGG | - | chr5.1:13544876-13544895 | None:intergenic | 35.0% | |
| GTGCATGTTTGTAATTGAGT+AGG | - | chr5.1:13542432-13542451 | None:intergenic | 35.0% | |
| GTTGTTGATGCTTTAACAAG+TGG | + | chr5.1:13542573-13542592 | MS.gene67470:CDS | 35.0% | |
| TATCCCATTTATATCGGATC+AGG | + | chr5.1:13541530-13541549 | MS.gene67470:CDS | 35.0% | |
| TCAAGAGGCTCAGATATTTA+GGG | + | chr5.1:13542344-13542363 | MS.gene67470:intron | 35.0% | |
| TCTCAGCTTAAAAAGGCTAT+AGG | - | chr5.1:13544824-13544843 | None:intergenic | 35.0% | |
| TGTGTTTCGTGAACTATTCA+TGG | - | chr5.1:13542043-13542062 | None:intergenic | 35.0% | |
| TTAAACAATGGATGGTGAAG+TGG | - | chr5.1:13544688-13544707 | None:intergenic | 35.0% | |
| ! | ATCCTTCTAAAAGGTTCTCT+AGG | + | chr5.1:13546126-13546145 | MS.gene67470:CDS | 35.0% |
| ! | ATGTTGTTTAAGCTGTCTCA+AGG | + | chr5.1:13545090-13545109 | MS.gene67470:intron | 35.0% |
| ! | CAATTGACTTTGTTGCTGTT+CGG | + | chr5.1:13542069-13542088 | MS.gene67470:intron | 35.0% |
| ! | CACCATTGTTAACGTTGATT+TGG | + | chr5.1:13541496-13541515 | MS.gene67470:CDS | 35.0% |
| ! | CTAGGAAATTGTGTTTTCAC+GGG | + | chr5.1:13546144-13546163 | MS.gene67470:CDS | 35.0% |
| ! | CTATGAAAAAGTATGCTGAC+CGG | - | chr5.1:13545051-13545070 | None:intergenic | 35.0% |
| ! | TAGAGGAGAGAGTATGTAAT+GGG | - | chr5.1:13544401-13544420 | None:intergenic | 35.0% |
| ! | TTAGAGGAGAGAGTATGTAA+TGG | - | chr5.1:13544402-13544421 | None:intergenic | 35.0% |
| ! | TTCCTAGAGAACCTTTTAGA+AGG | - | chr5.1:13546131-13546150 | None:intergenic | 35.0% |
| ! | TTTTGCTGAGTTAGTTGACA+GGG | - | chr5.1:13545122-13545141 | None:intergenic | 35.0% |
| ! | TTTTTGCTGAGTTAGTTGAC+AGG | - | chr5.1:13545123-13545142 | None:intergenic | 35.0% |
| !! | AATGTACTTTTGGCTGGAAA+AGG | + | chr5.1:13543382-13543401 | MS.gene67470:intron | 35.0% |
| !! | GATTAATTTGCATATGCCGT+CGG | - | chr5.1:13541856-13541875 | None:intergenic | 35.0% |
| !! | GGCGATTTTTGGATTTACAT+TGG | + | chr5.1:13545375-13545394 | MS.gene67470:intron | 35.0% |
| !! | GGTATATCAGGTTGATAAGA+AGG | + | chr5.1:13546080-13546099 | MS.gene67470:intron | 35.0% |
| !! | TTGTAGGTTGATTCTTCAGT+TGG | + | chr5.1:13543052-13543071 | MS.gene67470:intron | 35.0% |
| !!! | CATGTTTTGGGATACTTTGT+TGG | - | chr5.1:13544353-13544372 | None:intergenic | 35.0% |
| !!! | CCCTTTGTTATTCCTTTTCT+TGG | - | chr5.1:13544279-13544298 | None:intergenic | 35.0% |
| !!! | CTTTTGAAACTGTTTATGGG+AGG | - | chr5.1:13545198-13545217 | None:intergenic | 35.0% |
| !!! | GGGATACAGAATTTTTTGAG+TGG | + | chr5.1:13543230-13543249 | MS.gene67470:CDS | 35.0% |
| !!! | TTTCTCATGGCACCTTTTTT+AGG | + | chr5.1:13545686-13545705 | MS.gene67470:intron | 35.0% |
| AACCAAAGAATTGGTCGTAC+TGG | - | chr5.1:13545279-13545298 | None:intergenic | 40.0% | |
| AATATCTGCTAGGTGGTTAG+AGG | - | chr5.1:13544418-13544437 | None:intergenic | 40.0% | |
| ACATACACTTTCCAAACAGC+TGG | + | chr5.1:13544494-13544513 | MS.gene67470:intron | 40.0% | |
| ACCAATCAAGTTCTTCCCAA+GGG | - | chr5.1:13543101-13543120 | None:intergenic | 40.0% | |
| ACTTTGCATCCGATTGAGTA+AGG | - | chr5.1:13543644-13543663 | None:intergenic | 40.0% | |
| AGCAGAAGAAGACACTACTT+GGG | - | chr5.1:13544657-13544676 | None:intergenic | 40.0% | |
| AGTAGGCTGAGAAATTATGG+GGG | - | chr5.1:13545524-13545543 | None:intergenic | 40.0% | |
| AGTCAGGGCTACATTGAATT+TGG | + | chr5.1:13543908-13543927 | MS.gene67470:CDS | 40.0% | |
| AGTGTATGTCAGGAAAAGGA+AGG | - | chr5.1:13544483-13544502 | None:intergenic | 40.0% | |
| AGTTTCTTGTGGGTGATACA+TGG | + | chr5.1:13542114-13542133 | MS.gene67470:intron | 40.0% | |
| ATAGCATATGCCAGTGCATT+AGG | - | chr5.1:13543831-13543850 | None:intergenic | 40.0% | |
| ATCCAGTACGACCAATTCTT+TGG | + | chr5.1:13545274-13545293 | MS.gene67470:intron | 40.0% | |
| ATGTCCACAGTCATCATTTC+AGG | - | chr5.1:13545964-13545983 | None:intergenic | 40.0% | |
| CAACCCTGATCCGATATAAA+TGG | - | chr5.1:13541537-13541556 | None:intergenic | 40.0% | |
| CAATAAGGACCTTCTTTCCA+TGG | - | chr5.1:13542515-13542534 | None:intergenic | 40.0% | |
| CATGGAAATTGAGCTATGAC+AGG | - | chr5.1:13543614-13543633 | None:intergenic | 40.0% | |
| CCGTAGTGTTAGTGACAATA+AGG | - | chr5.1:13542530-13542549 | None:intergenic | 40.0% | |
| CGAACAGCAACAAAGTCAAT+TGG | - | chr5.1:13542071-13542090 | None:intergenic | 40.0% | |
| CGATGCAAAACACCTCAAAA+CGG | + | chr5.1:13545303-13545322 | MS.gene67470:intron | 40.0% | |
| CGGAGCTATCCCATTTATAT+CGG | + | chr5.1:13541524-13541543 | MS.gene67470:CDS | 40.0% | |
| CTATAAGCACACATTGAGGT+TGG | - | chr5.1:13543132-13543151 | None:intergenic | 40.0% | |
| CTCAAGAGGCTCAGATATTT+AGG | + | chr5.1:13542343-13542362 | MS.gene67470:intron | 40.0% | |
| CTTTGCATCCGATTGAGTAA+GGG | - | chr5.1:13543643-13543662 | None:intergenic | 40.0% | |
| GATCATGAGGTAGTTTCTTG+TGG | + | chr5.1:13542103-13542122 | MS.gene67470:intron | 40.0% | |
| GATGCAAAACACCTCAAAAC+GGG | + | chr5.1:13545304-13545323 | MS.gene67470:intron | 40.0% | |
| GCTGAGATATATGGAAAACC+GGG | + | chr5.1:13544837-13544856 | MS.gene67470:intron | 40.0% | |
| GGACACTATACAATTAGGGA+TGG | - | chr5.1:13542411-13542430 | None:intergenic | 40.0% | |
| GTCAGGGCTACATTGAATTT+GGG | + | chr5.1:13543909-13543928 | MS.gene67470:CDS | 40.0% | |
| GTGGCAAGAGAAAAATATGC+AGG | + | chr5.1:13543249-13543268 | MS.gene67470:CDS | 40.0% | |
| GTGTATGTCAGGAAAAGGAA+GGG | - | chr5.1:13544482-13544501 | None:intergenic | 40.0% | |
| GTGTCTATAAGCACACATTG+AGG | - | chr5.1:13543136-13543155 | None:intergenic | 40.0% | |
| GTTTCTTGTGGGTGATACAT+GGG | + | chr5.1:13542115-13542134 | MS.gene67470:intron | 40.0% | |
| TAAATCAGAAGTTAGGGCTC+AGG | - | chr5.1:13544943-13544962 | None:intergenic | 40.0% | |
| TAGAATCATCAATCCAACCG+AGG | - | chr5.1:13545888-13545907 | None:intergenic | 40.0% | |
| TAGGAAGTAGCCTATAAGAG+TGG | + | chr5.1:13541784-13541803 | MS.gene67470:intron | 40.0% | |
| TAGGCAATAGAAACTAGCGT+TGG | + | chr5.1:13545705-13545724 | MS.gene67470:intron | 40.0% | |
| TCAGATTCCAACCACTGTTA+TGG | + | chr5.1:13542888-13542907 | MS.gene67470:CDS | 40.0% | |
| TCCAGACTTTCATGTGGATA+CGG | - | chr5.1:13544537-13544556 | None:intergenic | 40.0% | |
| TGATTGCGTGTTCAACTGAT+AGG | + | chr5.1:13542726-13542745 | MS.gene67470:intron | 40.0% | |
| TGCACCTTTGTATCTAGACA+AGG | + | chr5.1:13542551-13542570 | MS.gene67470:CDS | 40.0% | |
| TGTATGTCAGGAAAAGGAAG+GGG | - | chr5.1:13544481-13544500 | None:intergenic | 40.0% | |
| TGTCATAGACTTGAACCATC+AGG | - | chr5.1:13542988-13543007 | None:intergenic | 40.0% | |
| TTAAATCTGTCATGGCGGTA+TGG | + | chr5.1:13545986-13546005 | MS.gene67470:intron | 40.0% | |
| TTTCCAGCAAAAATCCAACC+TGG | + | chr5.1:13541467-13541486 | MS.gene67470:CDS | 40.0% | |
| TTTCTTGTGGGTGATACATG+GGG | + | chr5.1:13542116-13542135 | MS.gene67470:intron | 40.0% | |
| ! | AAAAGTATGCTGACCGGAAA+AGG | - | chr5.1:13545045-13545064 | None:intergenic | 40.0% |
| ! | AGAGGAGAGAGTATGTAATG+GGG | - | chr5.1:13544400-13544419 | None:intergenic | 40.0% |
| ! | AGAGTATGTAATGGGGTGAT+GGG | - | chr5.1:13544393-13544412 | None:intergenic | 40.0% |
| ! | AGGTTGGATTTTTGCTGGAA+AGG | - | chr5.1:13541468-13541487 | None:intergenic | 40.0% |
| ! | ATCATTTCAGGAGGCACAAT+TGG | - | chr5.1:13545952-13545971 | None:intergenic | 40.0% |
| ! | CTGTTTGGAAAGTGTATGTC+AGG | - | chr5.1:13544493-13544512 | None:intergenic | 40.0% |
| ! | GGAAAGTGTATGTCAGGAAA+AGG | - | chr5.1:13544487-13544506 | None:intergenic | 40.0% |
| ! | GGGAAATTGACTTTGCAACA+AGG | + | chr5.1:13544622-13544641 | MS.gene67470:intron | 40.0% |
| ! | GGTTGGATTTTTGCTGGAAA+GGG | - | chr5.1:13541467-13541486 | None:intergenic | 40.0% |
| ! | GTTGATAAGAAGGTAGCAGA+TGG | + | chr5.1:13546090-13546109 | MS.gene67470:CDS | 40.0% |
| ! | GTTGGATTTTTGCTGGAAAG+GGG | - | chr5.1:13541466-13541485 | None:intergenic | 40.0% |
| ! | TTGGGAAATGTACTTTTGGC+TGG | + | chr5.1:13543376-13543395 | MS.gene67470:intron | 40.0% |
| ! | TTTGGGATACTTTGTTGGCT+AGG | - | chr5.1:13544348-13544367 | None:intergenic | 40.0% |
| !! | ATAGAAACTAGCGTTGGCTA+TGG | + | chr5.1:13545711-13545730 | MS.gene67470:CDS | 40.0% |
| !! | GAGAGTGTAATTTTACCGGA+TGG | + | chr5.1:13542615-13542634 | MS.gene67470:CDS | 40.0% |
| !! | GGAGTATTGATAGGACTCAT+GGG | - | chr5.1:13544565-13544584 | None:intergenic | 40.0% |
| !! | TAGAAACTAGCGTTGGCTAT+GGG | + | chr5.1:13545712-13545731 | MS.gene67470:CDS | 40.0% |
| !! | TAGGTTGATTCTTCAGTTGG+TGG | + | chr5.1:13543055-13543074 | MS.gene67470:intron | 40.0% |
| !! | TGAACAGTTGTTGGCTTCAA+GGG | - | chr5.1:13544735-13544754 | None:intergenic | 40.0% |
| !!! | CGTTTTGAGGTGTTTTGCAT+CGG | - | chr5.1:13545305-13545324 | None:intergenic | 40.0% |
| AACACCACGTAGGAATGAAG+CGG | - | chr5.1:13542860-13542879 | None:intergenic | 45.0% | |
| AAGTTAGGGCTCAGGTTCTT+CGG | - | chr5.1:13544935-13544954 | None:intergenic | 45.0% | |
| AATCATCAATCCAACCGAGG+CGG | - | chr5.1:13545885-13545904 | None:intergenic | 45.0% | |
| ACGGGATTCTATGCACAATC+TGG | + | chr5.1:13545322-13545341 | MS.gene67470:intron | 45.0% | |
| ACTGGTATAAACCATCCCCT+TGG | + | chr5.1:13543082-13543101 | MS.gene67470:CDS | 45.0% | |
| AGCAAAAACAGCCTCAACTC+TGG | + | chr5.1:13545135-13545154 | MS.gene67470:intron | 45.0% | |
| AGGCTCAGATATTTAGGGAC+AGG | + | chr5.1:13542349-13542368 | MS.gene67470:intron | 45.0% | |
| AGGTGGCATGAATATCTGCT+AGG | - | chr5.1:13544428-13544447 | None:intergenic | 45.0% | |
| ATATGCAGGCATTAATGGCC+AGG | + | chr5.1:13543263-13543282 | MS.gene67470:CDS | 45.0% | |
| ATCATGTGAAAACAAGGCCG+AGG | + | chr5.1:13543857-13543876 | MS.gene67470:CDS | 45.0% | |
| ATTCTTTCCACCACCGGAAA+AGG | + | chr5.1:13544908-13544927 | MS.gene67470:intron | 45.0% | |
| ATTGGTCGTACTGGATTCCA+TGG | - | chr5.1:13545270-13545289 | None:intergenic | 45.0% | |
| ATTTCCCAATCTGAGCCTTG+AGG | - | chr5.1:13544609-13544628 | None:intergenic | 45.0% | |
| CAATGGATGGTGAAGTGGAA+AGG | - | chr5.1:13544683-13544702 | None:intergenic | 45.0% | |
| CACCAATCAAGTTCTTCCCA+AGG | - | chr5.1:13543102-13543121 | None:intergenic | 45.0% | |
| CACGGGAGAATATGACAGAA+AGG | + | chr5.1:13546161-13546180 | MS.gene67470:CDS | 45.0% | |
| CATCGGAGCAACCAAAGAAT+TGG | - | chr5.1:13545288-13545307 | None:intergenic | 45.0% | |
| CCAATCAAGTTCTTCCCAAG+GGG | - | chr5.1:13543100-13543119 | None:intergenic | 45.0% | |
| CCAGACTTTCATGTGGATAC+GGG | - | chr5.1:13544536-13544555 | None:intergenic | 45.0% | |
| CCATTGAGTCTCGATTGGAT+CGG | + | chr5.1:13542776-13542795 | MS.gene67470:CDS | 45.0% | |
| CTGGTATAAACCATCCCCTT+GGG | + | chr5.1:13543083-13543102 | MS.gene67470:CDS | 45.0% | |
| CTTGAAGCCAACAACTGTTC+AGG | + | chr5.1:13544734-13544753 | MS.gene67470:intron | 45.0% | |
| GAGCAGAAGAAGACACTACT+TGG | - | chr5.1:13544658-13544677 | None:intergenic | 45.0% | |
| GATATCGTGATGTTTACGCG+AGG | + | chr5.1:13542147-13542166 | MS.gene67470:intron | 45.0% | |
| GATCCTATTCTTTCCACCAC+CGG | + | chr5.1:13544902-13544921 | MS.gene67470:intron | 45.0% | |
| GCAAGGAAAAACCAGAGTTG+AGG | - | chr5.1:13545149-13545168 | None:intergenic | 45.0% | |
| GGAATAAACGCGAGATCATG+AGG | + | chr5.1:13542090-13542109 | MS.gene67470:intron | 45.0% | |
| GTATGTCAGGAAAAGGAAGG+GGG | - | chr5.1:13544480-13544499 | None:intergenic | 45.0% | |
| GTGCATTAGGATCTCTGCAA+TGG | - | chr5.1:13543818-13543837 | None:intergenic | 45.0% | |
| TAAGACCTGTGCCATAACAG+TGG | - | chr5.1:13542902-13542921 | None:intergenic | 45.0% | |
| TACATTACCAGAGAGGGAAC+TGG | + | chr5.1:13543168-13543187 | MS.gene67470:CDS | 45.0% | |
| TAGGCATGTCCATGGAAAGA+AGG | + | chr5.1:13542503-13542522 | MS.gene67470:intron | 45.0% | |
| TATGCGCTGTGTTATCCTGA+TGG | + | chr5.1:13542970-13542989 | MS.gene67470:intron | 45.0% | |
| TATGTCAGGAAAAGGAAGGG+GGG | - | chr5.1:13544479-13544498 | None:intergenic | 45.0% | |
| TCAAGGGAAGTCGTAAAGGA+TGG | - | chr5.1:13544719-13544738 | None:intergenic | 45.0% | |
| TCCACAGTCATCATTTCAGG+AGG | - | chr5.1:13545961-13545980 | None:intergenic | 45.0% | |
| TCCACATGAAAGTCTGGATC+AGG | + | chr5.1:13544539-13544558 | MS.gene67470:intron | 45.0% | |
| TGGCATGAATATCTGCTAGG+TGG | - | chr5.1:13544425-13544444 | None:intergenic | 45.0% | |
| TGTGTGCTCCCTTACTCAAT+CGG | + | chr5.1:13543632-13543651 | MS.gene67470:intron | 45.0% | |
| TTCTTTCCACCACCGGAAAA+GGG | + | chr5.1:13544909-13544928 | MS.gene67470:intron | 45.0% | |
| TTGCAGAGATCCTAATGCAC+TGG | + | chr5.1:13543818-13543837 | MS.gene67470:intron | 45.0% | |
| TTGGTCGTACTGGATTCCAT+GGG | - | chr5.1:13545269-13545288 | None:intergenic | 45.0% | |
| TTGTACCACAATTCTGCCCA+TGG | + | chr5.1:13545250-13545269 | MS.gene67470:intron | 45.0% | |
| TTGTCCTCAAGGCTCAGATT+GGG | + | chr5.1:13544602-13544621 | MS.gene67470:intron | 45.0% | |
| ! | ACAACATTCATTGAAGGCGC+AGG | - | chr5.1:13545077-13545096 | None:intergenic | 45.0% |
| ! | ATTGAGTAAGGGAGCACACA+TGG | - | chr5.1:13543632-13543651 | None:intergenic | 45.0% |
| ! | CGCTCTTTTACCCCAAGAAA+AGG | + | chr5.1:13544264-13544283 | MS.gene67470:intron | 45.0% |
| ! | GAGAGTATGTAATGGGGTGA+TGG | - | chr5.1:13544394-13544413 | None:intergenic | 45.0% |
| ! | GAGTATGTAATGGGGTGATG+GGG | - | chr5.1:13544392-13544411 | None:intergenic | 45.0% |
| ! | GTGCATAGAATCCCGTTTTG+AGG | - | chr5.1:13545318-13545337 | None:intergenic | 45.0% |
| !! | ACACCAGGTTGGATTTTTGC+TGG | - | chr5.1:13541473-13541492 | None:intergenic | 45.0% |
| !! | ACCACTTTTCATGCTTCGAC+GGG | - | chr5.1:13545229-13545248 | None:intergenic | 45.0% |
| !! | CACCACTTTTCATGCTTCGA+CGG | - | chr5.1:13545230-13545249 | None:intergenic | 45.0% |
| !! | CTGAACAGTTGTTGGCTTCA+AGG | - | chr5.1:13544736-13544755 | None:intergenic | 45.0% |
| !! | GGGAGTATTGATAGGACTCA+TGG | - | chr5.1:13544566-13544585 | None:intergenic | 45.0% |
| !! | TCTTCAGTTGGTGGCAAAAC+TGG | + | chr5.1:13543064-13543083 | MS.gene67470:CDS | 45.0% |
| !! | TGGAAAAGGCATCTCTAGCT+TGG | + | chr5.1:13543396-13543415 | MS.gene67470:intron | 45.0% |
| !! | TTCTTGCTATGGTTTGCTGC+CGG | + | chr5.1:13544966-13544985 | MS.gene67470:intron | 45.0% |
| !! | TTTCCGGTGGTGGAAAGAAT+AGG | - | chr5.1:13544908-13544927 | None:intergenic | 45.0% |
| !! | TTTAAAAGAAAATTAAAATA+GGG | + | chr5.1:13543508-13543527 | MS.gene67470:intron | 5.0% |
| !!! | TTTTAAAAGAAAATTAAAAT+AGG | + | chr5.1:13543507-13543526 | MS.gene67470:intron | 5.0% |
| AACAGACTTGCCAGAAGGGT+TGG | - | chr5.1:13544786-13544805 | None:intergenic | 50.0% | |
| ACCTGTGCCATAACAGTGGT+TGG | - | chr5.1:13542898-13542917 | None:intergenic | 50.0% | |
| ATGAGAGAGAAGGTGGAGTC+AGG | + | chr5.1:13543892-13543911 | MS.gene67470:CDS | 50.0% | |
| ATGCACAATCTGGATCGGTG+AGG | + | chr5.1:13545332-13545351 | MS.gene67470:intron | 50.0% | |
| ATGGAAAACCGGGTGAACTC+TGG | + | chr5.1:13544847-13544866 | MS.gene67470:intron | 50.0% | |
| CAAGGCCATTGAGTCTCGAT+TGG | + | chr5.1:13542771-13542790 | MS.gene67470:CDS | 50.0% | |
| CCACAACAGACTTGCCAGAA+GGG | - | chr5.1:13544790-13544809 | None:intergenic | 50.0% | |
| CCCCTTGGGAAGAACTTGAT+TGG | + | chr5.1:13543097-13543116 | MS.gene67470:CDS | 50.0% | |
| CCCGTATCCACATGAAAGTC+TGG | + | chr5.1:13544533-13544552 | MS.gene67470:intron | 50.0% | |
| CCGATCCAATCGAGACTCAA+TGG | - | chr5.1:13542779-13542798 | None:intergenic | 50.0% | |
| CCTTGCAAGAATCGAACCAG+AGG | + | chr5.1:13545163-13545182 | MS.gene67470:intron | 50.0% | |
| CGAGGAACCTGAACAGTTGT+TGG | - | chr5.1:13544744-13544763 | None:intergenic | 50.0% | |
| CTCATCCAAGGACACAACCT+CGG | - | chr5.1:13543877-13543896 | None:intergenic | 50.0% | |
| CTGGTAGGAGTCATAGACTC+TGG | - | chr5.1:13544308-13544327 | None:intergenic | 50.0% | |
| CTTGTCCTCAAGGCTCAGAT+TGG | + | chr5.1:13544601-13544620 | MS.gene67470:intron | 50.0% | |
| GCCTCCTGAAATGATGACTG+TGG | + | chr5.1:13545957-13545976 | MS.gene67470:CDS | 50.0% | |
| GCCTGATCCAGACTTTCATG+TGG | - | chr5.1:13544543-13544562 | None:intergenic | 50.0% | |
| GGATTCCATGGGCAGAATTG+TGG | - | chr5.1:13545258-13545277 | None:intergenic | 50.0% | |
| GGCAGCAAACCATAGCAAGA+AGG | - | chr5.1:13544967-13544986 | None:intergenic | 50.0% | |
| GGCTTCAAGGGAAGTCGTAA+AGG | - | chr5.1:13544723-13544742 | None:intergenic | 50.0% | |
| GTGTCCTTGGATGAGAGAGA+AGG | + | chr5.1:13543882-13543901 | MS.gene67470:CDS | 50.0% | |
| GTTGACATGTCATACCGCCT+CGG | + | chr5.1:13545868-13545887 | MS.gene67470:CDS | 50.0% | |
| TCAAGTTCTTCCCAAGGGGA+TGG | - | chr5.1:13543096-13543115 | None:intergenic | 50.0% | |
| TCCAACCACTGTTATGGCAC+AGG | + | chr5.1:13542894-13542913 | MS.gene67470:CDS | 50.0% | |
| TCCACCTTCTCTCTCATCCA+AGG | - | chr5.1:13543889-13543908 | None:intergenic | 50.0% | |
| TCCTTGGATGAGAGAGAAGG+TGG | + | chr5.1:13543885-13543904 | MS.gene67470:CDS | 50.0% | |
| TCCTTGTACTGCTCACCATC+CGG | - | chr5.1:13542633-13542652 | None:intergenic | 50.0% | |
| TGAGAGAGAAGGTGGAGTCA+GGG | + | chr5.1:13543893-13543912 | MS.gene67470:CDS | 50.0% | |
| TGCAAGAATCGAACCAGAGG+CGG | + | chr5.1:13545166-13545185 | MS.gene67470:intron | 50.0% | |
| TGGTGAGCAGTACAAGGACA+TGG | + | chr5.1:13542635-13542654 | MS.gene67470:CDS | 50.0% | |
| TTGAGTCTCGATTGGATCGG+CGG | + | chr5.1:13542779-13542798 | MS.gene67470:CDS | 50.0% | |
| ! | ACTTTTGTTGCCCTTGGAGG+TGG | + | chr5.1:13542805-13542824 | MS.gene67470:CDS | 50.0% |
| ! | AGGAAAAGGAAGGGGGGTAT+AGG | - | chr5.1:13544473-13544492 | None:intergenic | 50.0% |
| ! | CACTTTTCATGCTTCGACGG+GGG | - | chr5.1:13545227-13545246 | None:intergenic | 50.0% |
| ! | CCTCTGGTTCGATTCTTGCA+AGG | - | chr5.1:13545166-13545185 | None:intergenic | 50.0% |
| ! | GGAAAAGGAAGGGGGGTATA+GGG | - | chr5.1:13544472-13544491 | None:intergenic | 50.0% |
| ! | TCCAAACAGCTGGCCTATGA+GGG | + | chr5.1:13544504-13544523 | MS.gene67470:intron | 50.0% |
| ! | TGCACTTTTGTTGCCCTTGG+AGG | + | chr5.1:13542802-13542821 | MS.gene67470:CDS | 50.0% |
| ! | TTAACAATGGTGGGGACACC+AGG | - | chr5.1:13541488-13541507 | None:intergenic | 50.0% |
| ! | TTCCAAACAGCTGGCCTATG+AGG | + | chr5.1:13544503-13544522 | MS.gene67470:intron | 50.0% |
| !! | CCACTTTTCATGCTTCGACG+GGG | - | chr5.1:13545228-13545247 | None:intergenic | 50.0% |
| AAGAATCGAACCAGAGGCGG+AGG | + | chr5.1:13545169-13545188 | MS.gene67470:intron | 55.0% | |
| AAGGGTTGGAGGTTGAGCCT+GGG | - | chr5.1:13544772-13544791 | None:intergenic | 55.0% | |
| ACAAGACTGCTTGCGACGGA+GGG | - | chr5.1:13544586-13544605 | None:intergenic | 55.0% | |
| ACATGTCATACCGCCTCGGT+TGG | + | chr5.1:13545872-13545891 | MS.gene67470:CDS | 55.0% | |
| ACCCTCATAGGCCAGCTGTT+TGG | - | chr5.1:13544508-13544527 | None:intergenic | 55.0% | |
| ACCGGATGGTGAGCAGTACA+AGG | + | chr5.1:13542629-13542648 | MS.gene67470:CDS | 55.0% | |
| AGACTTGCCAGAAGGGTTGG+AGG | - | chr5.1:13544783-13544802 | None:intergenic | 55.0% | |
| CAGAGAGGGAACTGGCATCA+GGG | + | chr5.1:13543176-13543195 | MS.gene67470:CDS | 55.0% | |
| CCCCGTCGAAGCATGAAAAG+TGG | + | chr5.1:13545225-13545244 | MS.gene67470:intron | 55.0% | |
| CCCTTCTGGCAAGTCTGTTG+TGG | + | chr5.1:13544787-13544806 | MS.gene67470:intron | 55.0% | |
| CTTTCATGTGGATACGGGCG+TGG | - | chr5.1:13544531-13544550 | None:intergenic | 55.0% | |
| GAGGACAAGACTGCTTGCGA+CGG | - | chr5.1:13544590-13544609 | None:intergenic | 55.0% | |
| GCCAATCACACCACCTCCAA+GGG | - | chr5.1:13542818-13542837 | None:intergenic | 55.0% | |
| GCCACAACAGACTTGCCAGA+AGG | - | chr5.1:13544791-13544810 | None:intergenic | 55.0% | |
| GGTGTGATTGGCGACATGTG+TGG | + | chr5.1:13542826-13542845 | MS.gene67470:CDS | 55.0% | |
| ! | CAGGTTCTTCGGCCCTTTTC+CGG | - | chr5.1:13544924-13544943 | None:intergenic | 55.0% |
| ! | CGCAAGCAGTCTTGTCCTCA+AGG | + | chr5.1:13544591-13544610 | MS.gene67470:intron | 55.0% |
| ! | CGGTGCACTTTTGTTGCCCT+TGG | + | chr5.1:13542799-13542818 | MS.gene67470:CDS | 55.0% |
| !! | GCGACGGAGGGAGTATTGAT+AGG | - | chr5.1:13544574-13544593 | None:intergenic | 55.0% |
| AGAGGCTGTTGCAGCTGGCA+CGG | + | chr5.1:13545749-13545768 | MS.gene67470:CDS | 60.0% | |
| AGGGTTGGAGGTTGAGCCTG+GGG | - | chr5.1:13544771-13544790 | None:intergenic | 60.0% | |
| ATACGGGCGTGGACCCTCAT+AGG | - | chr5.1:13544520-13544539 | None:intergenic | 60.0% | |
| CAAGGCCGAGGTTGTGTCCT+TGG | + | chr5.1:13543869-13543888 | MS.gene67470:CDS | 60.0% | |
| CATGGAGAGGCTGTTGCAGC+TGG | + | chr5.1:13545744-13545763 | MS.gene67470:CDS | 60.0% | |
| CCAGAGAGGGAACTGGCATC+AGG | + | chr5.1:13543175-13543194 | MS.gene67470:CDS | 60.0% | |
| CCTGATGCCAGTTCCCTCTC+TGG | - | chr5.1:13543178-13543197 | None:intergenic | 60.0% | |
| CGCCAATCACACCACCTCCA+AGG | - | chr5.1:13542819-13542838 | None:intergenic | 60.0% | |
| GAAGGGTTGGAGGTTGAGCC+TGG | - | chr5.1:13544773-13544792 | None:intergenic | 60.0% | |
| GACAAGACTGCTTGCGACGG+AGG | - | chr5.1:13544587-13544606 | None:intergenic | 60.0% | |
| GCCCTTGGAGGTGGTGTGAT+TGG | + | chr5.1:13542814-13542833 | MS.gene67470:CDS | 60.0% | |
| GGCTATGGGCAGTGGCTTCA+TGG | + | chr5.1:13545726-13545745 | MS.gene67470:CDS | 60.0% | |
| GGCTCAACCTCCAACCCTTC+TGG | + | chr5.1:13544773-13544792 | MS.gene67470:intron | 60.0% | |
| TCAGGTTCCTCGATGTCCCC+AGG | + | chr5.1:13544752-13544771 | MS.gene67470:intron | 60.0% | |
| TGGGCAGTGGCTTCATGGAG+AGG | + | chr5.1:13545731-13545750 | MS.gene67470:CDS | 60.0% | |
| ! | CAATGGTGGGGACACCAGGT+TGG | - | chr5.1:13541484-13541503 | None:intergenic | 60.0% |
| ! | GCTGCCGCTTCATTCCTACG+TGG | + | chr5.1:13542853-13542872 | MS.gene67470:CDS | 60.0% |
| ! | GTTCTTCGGCCCTTTTCCGG+TGG | - | chr5.1:13544921-13544940 | None:intergenic | 60.0% |
| ! | TTCTCAAGTTGCGCCCGCAC+CGG | - | chr5.1:13544988-13545007 | None:intergenic | 60.0% |
| !! | CTAGCGTTGGCTATGGGCAG+TGG | + | chr5.1:13545718-13545737 | MS.gene67470:CDS | 60.0% |
| !! | CTATGGTTTGCTGCCGGTGC+GGG | + | chr5.1:13544972-13544991 | MS.gene67470:intron | 60.0% |
| !! | GCTATGGTTTGCTGCCGGTG+CGG | + | chr5.1:13544971-13544990 | MS.gene67470:intron | 60.0% |
| !! | TGAGGGTGCCAGAGTTCACC+CGG | - | chr5.1:13544858-13544877 | None:intergenic | 60.0% |
| !! | TGGGGTGATGGGGAGTTGTG+AGG | - | chr5.1:13544382-13544401 | None:intergenic | 60.0% |
| GGGTGAACTCTGGCACCCTC+AGG | + | chr5.1:13544857-13544876 | MS.gene67470:intron | 65.0% | |
| GGTTGAGCCTGGGGACATCG+AGG | - | chr5.1:13544762-13544781 | None:intergenic | 65.0% | |
| TGGGAGGAAACCTCCGCCTC+TGG | - | chr5.1:13545182-13545201 | None:intergenic | 65.0% | |
| ! | CTTCGGCCCTTTTCCGGTGG+TGG | - | chr5.1:13544918-13544937 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 13541458 | 13546210 | 13541458 | ID=MS.gene67470 |
| chr5.1 | mRNA | 13541458 | 13546210 | 13541458 | ID=MS.gene67470.t1;Parent=MS.gene67470 |
| chr5.1 | exon | 13541458 | 13541582 | 13541458 | ID=MS.gene67470.t1.exon1;Parent=MS.gene67470.t1 |
| chr5.1 | CDS | 13541458 | 13541582 | 13541458 | ID=cds.MS.gene67470.t1;Parent=MS.gene67470.t1 |
| chr5.1 | exon | 13542506 | 13542656 | 13542506 | ID=MS.gene67470.t1.exon2;Parent=MS.gene67470.t1 |
| chr5.1 | CDS | 13542506 | 13542656 | 13542506 | ID=cds.MS.gene67470.t1;Parent=MS.gene67470.t1 |
| chr5.1 | exon | 13542748 | 13542915 | 13542748 | ID=MS.gene67470.t1.exon3;Parent=MS.gene67470.t1 |
| chr5.1 | CDS | 13542748 | 13542915 | 13542748 | ID=cds.MS.gene67470.t1;Parent=MS.gene67470.t1 |
| chr5.1 | exon | 13543058 | 13543284 | 13543058 | ID=MS.gene67470.t1.exon4;Parent=MS.gene67470.t1 |
| chr5.1 | CDS | 13543058 | 13543284 | 13543058 | ID=cds.MS.gene67470.t1;Parent=MS.gene67470.t1 |
| chr5.1 | exon | 13543824 | 13543947 | 13543824 | ID=MS.gene67470.t1.exon5;Parent=MS.gene67470.t1 |
| chr5.1 | CDS | 13543824 | 13543947 | 13543824 | ID=cds.MS.gene67470.t1;Parent=MS.gene67470.t1 |
| chr5.1 | exon | 13545708 | 13545770 | 13545708 | ID=MS.gene67470.t1.exon6;Parent=MS.gene67470.t1 |
| chr5.1 | CDS | 13545708 | 13545770 | 13545708 | ID=cds.MS.gene67470.t1;Parent=MS.gene67470.t1 |
| chr5.1 | exon | 13545859 | 13546002 | 13545859 | ID=MS.gene67470.t1.exon7;Parent=MS.gene67470.t1 |
| chr5.1 | CDS | 13545859 | 13546002 | 13545859 | ID=cds.MS.gene67470.t1;Parent=MS.gene67470.t1 |
| chr5.1 | exon | 13546090 | 13546210 | 13546090 | ID=MS.gene67470.t1.exon8;Parent=MS.gene67470.t1 |
| chr5.1 | CDS | 13546090 | 13546210 | 13546090 | ID=cds.MS.gene67470.t1;Parent=MS.gene67470.t1 |
| Gene Sequence |
| Protein sequence |
