Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67472.t1 | XP_003612212.1 | 98.7 | 377 | 5 | 0 | 1 | 377 | 67 | 443 | 2.10E-212 | 748 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67472.t1 | U3KRF2 | 86.5 | 377 | 51 | 0 | 1 | 377 | 69 | 445 | 3.2e-190 | 665.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67472.t1 | G7JXJ9 | 98.7 | 377 | 5 | 0 | 1 | 377 | 67 | 443 | 1.5e-212 | 748.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene013566 | MS.gene67472 | PPI |
| MS.gene06894 | MS.gene67472 | PPI |
| MS.gene06683 | MS.gene67472 | PPI |
| MS.gene057128 | MS.gene67472 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67472.t1 | MTR_5g022580 | 98.674 | 377 | 5 | 0 | 1 | 377 | 67 | 443 | 0.0 | 770 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67472.t1 | AT5G66120 | 85.205 | 365 | 54 | 0 | 13 | 377 | 78 | 442 | 0.0 | 659 |
| MS.gene67472.t1 | AT5G66120 | 86.012 | 336 | 47 | 0 | 42 | 377 | 3 | 338 | 0.0 | 609 |
Find 105 sgRNAs with CRISPR-Local
Find 387 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAACCCTGATCCGATATAAA+TGG | 0.217921 | 5.1:-13552240 | None:intergenic |
| TTTGCAGAAGTTATAAAGTA+TGG | 0.237109 | 5.1:+13553905 | MS.gene67472:CDS |
| AGTCAGGGCTACATTGAATT+TGG | 0.243315 | 5.1:+13554614 | MS.gene67472:CDS |
| CACCATTGTTAACGTTGATT+TGG | 0.244416 | 5.1:+13552202 | MS.gene67472:CDS |
| TTATAAAGTATGGGCTCATT+AGG | 0.291558 | 5.1:+13553915 | MS.gene67472:CDS |
| TTGAGACTTATCCTTCTAAA+AGG | 0.299398 | 5.1:+13556823 | MS.gene67472:CDS |
| TTGAATTTGGGTCATACATT+TGG | 0.323104 | 5.1:+13554627 | MS.gene67472:CDS |
| ATAGCATATGCCAGTGCATT+AGG | 0.327626 | 5.1:-13554534 | None:intergenic |
| TCTTCAGTTGGTGGCAAAAC+TGG | 0.330298 | 5.1:+13553770 | MS.gene67472:CDS |
| ACACTCTCAACAGAAACATT+TGG | 0.341474 | 5.1:-13553306 | None:intergenic |
| CACTCTCAACAGAAACATTT+GGG | 0.343857 | 5.1:-13553305 | None:intergenic |
| ACCATTGTTAACGTTGATTT+GGG | 0.350396 | 5.1:+13552203 | MS.gene67472:CDS |
| ATGTCCACAGTCATCATTTC+AGG | 0.366546 | 5.1:-13556667 | None:intergenic |
| TCAGATTCCAACCACTGTTA+TGG | 0.372653 | 5.1:+13553594 | MS.gene67472:CDS |
| ATGAGAGAGAAGGTGGAGTC+AGG | 0.374462 | 5.1:+13554598 | MS.gene67472:CDS |
| TTAACGTTGATTTGGGTAAT+CGG | 0.380324 | 5.1:+13552210 | MS.gene67472:CDS |
| CAAGGCCGAGGTTGTGTCCT+TGG | 0.381716 | 5.1:+13554575 | MS.gene67472:CDS |
| GCCCTTGGAGGTGGTGTGAT+TGG | 0.385690 | 5.1:+13553520 | MS.gene67472:CDS |
| TATCCCATTTATATCGGATC+AGG | 0.386598 | 5.1:+13552236 | MS.gene67472:CDS |
| CATGGAGAGGCTGTTGCAGC+TGG | 0.391153 | 5.1:+13556450 | MS.gene67472:CDS |
| ATCATTTCAGGAGGCACAAT+TGG | 0.396114 | 5.1:-13556655 | None:intergenic |
| CCAGAGAGGGAACTGGCATC+AGG | 0.397934 | 5.1:+13553881 | MS.gene67472:CDS |
| GTCAGGGCTACATTGAATTT+GGG | 0.399767 | 5.1:+13554615 | MS.gene67472:CDS |
| CGGAGCTATCCCATTTATAT+CGG | 0.402539 | 5.1:+13552230 | MS.gene67472:CDS |
| GGCTATGGGCAGTGGCTTCA+TGG | 0.408977 | 5.1:+13556432 | MS.gene67472:CDS |
| CCGTAGTGTTAGTGACAATA+AGG | 0.430212 | 5.1:-13553233 | None:intergenic |
| CCCCTTGGGAAGAACTTGAT+TGG | 0.431232 | 5.1:+13553803 | MS.gene67472:CDS |
| AATTACCTTTGAAGAAGTTC+AGG | 0.444038 | 5.1:-13552272 | None:intergenic |
| CCTGATGCCAGTTCCCTCTC+TGG | 0.447867 | 5.1:-13553881 | None:intergenic |
| TATAAAGTATGGGCTCATTA+GGG | 0.460868 | 5.1:+13553916 | MS.gene67472:CDS |
| AACCCTGATCCGATATAAAT+GGG | 0.471338 | 5.1:-13552239 | None:intergenic |
| ATAGAAACTAGCGTTGGCTA+TGG | 0.484418 | 5.1:+13556417 | MS.gene67472:CDS |
| TCCTTGTACTGCTCACCATC+CGG | 0.486431 | 5.1:-13553336 | None:intergenic |
| TGAGAGAGAAGGTGGAGTCA+GGG | 0.489001 | 5.1:+13554599 | MS.gene67472:CDS |
| GGTATATCAGGTTGATAAGA+AGG | 0.492255 | 5.1:+13556786 | MS.gene67472:intron |
| TAGGTTGATTCTTCAGTTGG+TGG | 0.498341 | 5.1:+13553761 | MS.gene67472:intron |
| CAAGGCCATTGAGTCTCGAT+TGG | 0.499244 | 5.1:+13553477 | MS.gene67472:CDS |
| GTTGTTGATGCTTTAACAAG+TGG | 0.499540 | 5.1:+13553279 | MS.gene67472:CDS |
| AAATCAACGTTAACAATGGT+GGG | 0.500362 | 5.1:-13552200 | None:intergenic |
| CAATAAGGACCTTCTTTCCA+TGG | 0.505079 | 5.1:-13553218 | None:intergenic |
| CTAGCGTTGGCTATGGGCAG+TGG | 0.507771 | 5.1:+13556424 | MS.gene67472:CDS |
| ATATGCAGGCATTAATGGCC+AGG | 0.511276 | 5.1:+13553969 | MS.gene67472:CDS |
| TTGTAGGTTGATTCTTCAGT+TGG | 0.512666 | 5.1:+13553758 | MS.gene67472:intron |
| CCGATCCAATCGAGACTCAA+TGG | 0.515263 | 5.1:-13553482 | None:intergenic |
| ATCCTTCTAAAAGGTTCTCT+AGG | 0.515459 | 5.1:+13556832 | MS.gene67472:CDS |
| TTGCAGAAGTTATAAAGTAT+GGG | 0.520923 | 5.1:+13553906 | MS.gene67472:CDS |
| CTGGTATAAACCATCCCCTT+GGG | 0.525333 | 5.1:+13553789 | MS.gene67472:CDS |
| TACATTACCAGAGAGGGAAC+TGG | 0.528745 | 5.1:+13553874 | MS.gene67472:CDS |
| TTAACAATGGTGGGGACACC+AGG | 0.531488 | 5.1:-13552191 | None:intergenic |
| ACCTGTGCCATAACAGTGGT+TGG | 0.531757 | 5.1:-13553601 | None:intergenic |
| ACCGGATGGTGAGCAGTACA+AGG | 0.533496 | 5.1:+13553335 | MS.gene67472:CDS |
| CAAATCAACGTTAACAATGG+TGG | 0.540010 | 5.1:-13552201 | None:intergenic |
| ACATGTCATACCGCCTCGGT+TGG | 0.540345 | 5.1:+13556578 | MS.gene67472:CDS |
| TCAAGTTCTTCCCAAGGGGA+TGG | 0.545666 | 5.1:-13553799 | None:intergenic |
| CGCCAATCACACCACCTCCA+AGG | 0.548112 | 5.1:-13553522 | None:intergenic |
| TAGGCATGTCCATGGAAAGA+AGG | 0.549371 | 5.1:+13553209 | MS.gene67472:intron |
| TAGAAACTAGCGTTGGCTAT+GGG | 0.550835 | 5.1:+13556418 | MS.gene67472:CDS |
| TGGGCAGTGGCTTCATGGAG+AGG | 0.553068 | 5.1:+13556437 | MS.gene67472:CDS |
| TATAATAATAGGCATGTCCA+TGG | 0.555537 | 5.1:+13553201 | MS.gene67472:intron |
| CACGGGAGAATATGACAGAA+AGG | 0.557955 | 5.1:+13556867 | MS.gene67472:CDS |
| TTGCAGAGATCCTAATGCAC+TGG | 0.562804 | 5.1:+13554524 | MS.gene67472:intron |
| ACTGGTATAAACCATCCCCT+TGG | 0.563182 | 5.1:+13553788 | MS.gene67472:CDS |
| ATAAACCTGAACTTCTTCAA+AGG | 0.564077 | 5.1:+13552267 | MS.gene67472:CDS |
| TCCAACCACTGTTATGGCAC+AGG | 0.567423 | 5.1:+13553600 | MS.gene67472:CDS |
| CAATGGTGGGGACACCAGGT+TGG | 0.572157 | 5.1:-13552187 | None:intergenic |
| ACCAATCAAGTTCTTCCCAA+GGG | 0.573622 | 5.1:-13553804 | None:intergenic |
| CACCAATCAAGTTCTTCCCA+AGG | 0.573892 | 5.1:-13553805 | None:intergenic |
| CAGAGAGGGAACTGGCATCA+GGG | 0.581095 | 5.1:+13553882 | MS.gene67472:CDS |
| GCCAATCACACCACCTCCAA+GGG | 0.583987 | 5.1:-13553521 | None:intergenic |
| ATCCCATTTATATCGGATCA+GGG | 0.585337 | 5.1:+13552237 | MS.gene67472:CDS |
| CTATAAGCACACATTGAGGT+TGG | 0.590057 | 5.1:-13553835 | None:intergenic |
| CCTTATTGTCACTAACACTA+CGG | 0.592911 | 5.1:+13553233 | MS.gene67472:CDS |
| GTTGATAAGAAGGTAGCAGA+TGG | 0.593067 | 5.1:+13556796 | MS.gene67472:CDS |
| TGCACCTTTGTATCTAGACA+AGG | 0.596590 | 5.1:+13553257 | MS.gene67472:CDS |
| GTTGACATGTCATACCGCCT+CGG | 0.604970 | 5.1:+13556574 | MS.gene67472:CDS |
| AGAGGCTGTTGCAGCTGGCA+CGG | 0.606315 | 5.1:+13556455 | MS.gene67472:CDS |
| TCCACCTTCTCTCTCATCCA+AGG | 0.607242 | 5.1:-13554592 | None:intergenic |
| ATTAGATACATTACCAGAGA+GGG | 0.613639 | 5.1:+13553868 | MS.gene67472:CDS |
| ATCATGTGAAAACAAGGCCG+AGG | 0.615090 | 5.1:+13554563 | MS.gene67472:CDS |
| TTGAGTCTCGATTGGATCGG+CGG | 0.622236 | 5.1:+13553485 | MS.gene67472:CDS |
| ACCCAAATCAACGTTAACAA+TGG | 0.628458 | 5.1:-13552204 | None:intergenic |
| CTCATCCAAGGACACAACCT+CGG | 0.631144 | 5.1:-13554580 | None:intergenic |
| ACAACCTTGTCTAGATACAA+AGG | 0.633531 | 5.1:-13553261 | None:intergenic |
| AATCAACGTTAACAATGGTG+GGG | 0.636830 | 5.1:-13552199 | None:intergenic |
| GGACATGTTTAAATCTGTCA+TGG | 0.638172 | 5.1:+13556684 | MS.gene67472:CDS |
| TAGGCAATAGAAACTAGCGT+TGG | 0.642948 | 5.1:+13556411 | MS.gene67472:intron |
| AAAGCGATCATGTGAAAACA+AGG | 0.643424 | 5.1:+13554557 | MS.gene67472:CDS |
| TCCTTGGATGAGAGAGAAGG+TGG | 0.653001 | 5.1:+13554591 | MS.gene67472:CDS |
| AACACCACGTAGGAATGAAG+CGG | 0.653409 | 5.1:-13553563 | None:intergenic |
| TGGTGAGCAGTACAAGGACA+TGG | 0.659373 | 5.1:+13553341 | MS.gene67472:CDS |
| TCCACAGTCATCATTTCAGG+AGG | 0.661026 | 5.1:-13556664 | None:intergenic |
| CCATTGAGTCTCGATTGGAT+CGG | 0.669888 | 5.1:+13553482 | MS.gene67472:CDS |
| GGTGTGATTGGCGACATGTG+TGG | 0.672916 | 5.1:+13553532 | MS.gene67472:CDS |
| GTGTCCTTGGATGAGAGAGA+AGG | 0.674887 | 5.1:+13554588 | MS.gene67472:CDS |
| CCAATCAAGTTCTTCCCAAG+GGG | 0.683553 | 5.1:-13553803 | None:intergenic |
| TAAGACCTGTGCCATAACAG+TGG | 0.688059 | 5.1:-13553605 | None:intergenic |
| GTGTCTATAAGCACACATTG+AGG | 0.695429 | 5.1:-13553839 | None:intergenic |
| TCTTATGAAAGTGTTTGACA+AGG | 0.696371 | 5.1:+13553459 | MS.gene67472:CDS |
| GCCTCCTGAAATGATGACTG+TGG | 0.699500 | 5.1:+13556663 | MS.gene67472:CDS |
| CATTAGATACATTACCAGAG+AGG | 0.702812 | 5.1:+13553867 | MS.gene67472:CDS |
| GAATAAAATTAACACCACGT+AGG | 0.705762 | 5.1:-13553573 | None:intergenic |
| TAGAATCATCAATCCAACCG+AGG | 0.718923 | 5.1:-13556591 | None:intergenic |
| CATGTTTAAATCTGTCATGG+CGG | 0.724496 | 5.1:+13556687 | MS.gene67472:CDS |
| GCTGCCGCTTCATTCCTACG+TGG | 0.729031 | 5.1:+13553559 | MS.gene67472:CDS |
| AATCATCAATCCAACCGAGG+CGG | 0.730486 | 5.1:-13556588 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTAAATTTATAGACAAA+TGG | + | chr5.1:13552678-13552697 | MS.gene67472:intron | 10.0% |
| !! | TATTTCATGTTTATAATAAT+AGG | + | chr5.1:13553190-13553209 | MS.gene67472:intron | 10.0% |
| !! | TCAATTTAATAAATATTAGA+TGG | + | chr5.1:13554827-13554846 | MS.gene67472:intron | 10.0% |
| !! | TTAAAAGAAAATTAAAATAG+GGG | + | chr5.1:13554215-13554234 | MS.gene67472:intron | 10.0% |
| !! | TTACTGTTTATTATATTATT+TGG | + | chr5.1:13554664-13554683 | MS.gene67472:intron | 10.0% |
| !!! | TTTTAAAAACATATATAAGT+AGG | - | chr5.1:13556247-13556266 | None:intergenic | 10.0% |
| !! | AATACAAAATTCAATGAATA+TGG | - | chr5.1:13553734-13553753 | None:intergenic | 15.0% |
| !!! | GATATTATTGAAGATATTTT+AGG | + | chr5.1:13552471-13552490 | MS.gene67472:intron | 15.0% |
| !!! | TTTTTTTTTTTTTGAAGTTG+TGG | + | chr5.1:13552926-13552945 | MS.gene67472:intron | 15.0% |
| !! | AAACTATGATGATTATGAAA+AGG | - | chr5.1:13552905-13552924 | None:intergenic | 20.0% |
| !! | AAATATGTAACATGATGATT+AGG | + | chr5.1:13552951-13552970 | MS.gene67472:intron | 20.0% |
| !! | AAATTCAATGAATATGGAAA+AGG | - | chr5.1:13553728-13553747 | None:intergenic | 20.0% |
| !! | AATATGTAACATGATGATTA+GGG | + | chr5.1:13552952-13552971 | MS.gene67472:intron | 20.0% |
| !! | AATTCAATGAATATGGAAAA+GGG | - | chr5.1:13553727-13553746 | None:intergenic | 20.0% |
| !! | ATAGTCAATTTAATCAAACA+TGG | + | chr5.1:13554882-13554901 | MS.gene67472:intron | 20.0% |
| !! | ATCACATTAATTAAGAAAGT+TGG | + | chr5.1:13552650-13552669 | MS.gene67472:intron | 20.0% |
| !! | GACTAAAAGTTCATTTATAT+TGG | + | chr5.1:13556765-13556784 | MS.gene67472:intron | 20.0% |
| !! | TAATACTAATCATCAAACAT+AGG | - | chr5.1:13552351-13552370 | None:intergenic | 20.0% |
| !! | TATCTTCAATAATATCTACA+TGG | - | chr5.1:13552467-13552486 | None:intergenic | 20.0% |
| !! | TTCATTTATATTGGTATATC+AGG | + | chr5.1:13556774-13556793 | MS.gene67472:intron | 20.0% |
| !!! | AAATCTATCTTTTGAAAAAG+GGG | - | chr5.1:13555726-13555745 | None:intergenic | 20.0% |
| !!! | ACGTTCTCAATTTTTAATTA+AGG | + | chr5.1:13552398-13552417 | MS.gene67472:intron | 20.0% |
| !!! | AGAAATCTATCTTTTGAAAA+AGG | - | chr5.1:13555728-13555747 | None:intergenic | 20.0% |
| !!! | ATTTTCCTTATTCTAACATT+TGG | - | chr5.1:13556124-13556143 | None:intergenic | 20.0% |
| !!! | GAAATCTATCTTTTGAAAAA+GGG | - | chr5.1:13555727-13555746 | None:intergenic | 20.0% |
| !!! | GAATTTTGTATTATGTTTGT+AGG | + | chr5.1:13553742-13553761 | MS.gene67472:intron | 20.0% |
| !!! | GATTTAAGTTGTATACTTTT+AGG | + | chr5.1:13552420-13552439 | MS.gene67472:intron | 20.0% |
| !!! | GTAAAAGCAATTTTATTGAT+GGG | + | chr5.1:13554934-13554953 | MS.gene67472:intron | 20.0% |
| !!! | TCTTTATTTTGTGTTTGAAT+TGG | + | chr5.1:13553368-13553387 | MS.gene67472:intron | 20.0% |
| !!! | TGTAAAAGCAATTTTATTGA+TGG | + | chr5.1:13554933-13554952 | MS.gene67472:intron | 20.0% |
| !!! | TTCCAACTTTTACAAATTAT+CGG | + | chr5.1:13554495-13554514 | MS.gene67472:intron | 20.0% |
| ! | AAAGACAATATAACACGAAA+TGG | - | chr5.1:13556204-13556223 | None:intergenic | 25.0% |
| ! | AAGACAATATAACACGAAAT+GGG | - | chr5.1:13556203-13556222 | None:intergenic | 25.0% |
| ! | AGATAGACAAACAAGAAATA+CGG | - | chr5.1:13554427-13554446 | None:intergenic | 25.0% |
| ! | ATATGTAACATGATGATTAG+GGG | + | chr5.1:13552953-13552972 | MS.gene67472:intron | 25.0% |
| ! | CAAACAAGGTTCTATATTTA+GGG | - | chr5.1:13552625-13552644 | None:intergenic | 25.0% |
| ! | GCTCATTGAAATCATAAAAT+CGG | + | chr5.1:13556060-13556079 | MS.gene67472:intron | 25.0% |
| ! | GTATGAAATATTTATAACCC+AGG | + | chr5.1:13554729-13554748 | MS.gene67472:intron | 25.0% |
| ! | GTATTATACAATTTACGTAG+TGG | + | chr5.1:13553082-13553101 | MS.gene67472:intron | 25.0% |
| ! | TAATGTGATTTAGTCAAACA+AGG | - | chr5.1:13552639-13552658 | None:intergenic | 25.0% |
| ! | TACACTGTTACATATTACTT+GGG | + | chr5.1:13554064-13554083 | MS.gene67472:intron | 25.0% |
| ! | TAGTTTCTATTGCCTAAAAA+AGG | - | chr5.1:13556407-13556426 | None:intergenic | 25.0% |
| ! | TCAAACAAGGTTCTATATTT+AGG | - | chr5.1:13552626-13552645 | None:intergenic | 25.0% |
| ! | TTACACTGTTACATATTACT+TGG | + | chr5.1:13554063-13554082 | MS.gene67472:intron | 25.0% |
| ! | TTCATACATCAAGAAAGAAA+AGG | - | chr5.1:13554716-13554735 | None:intergenic | 25.0% |
| ! | TTGCAGAAGTTATAAAGTAT+GGG | + | chr5.1:13553906-13553925 | MS.gene67472:CDS | 25.0% |
| ! | TTTGCAGAAGTTATAAAGTA+TGG | + | chr5.1:13553905-13553924 | MS.gene67472:CDS | 25.0% |
| ! | TTTGTGTTTATTTACACTCT+TGG | + | chr5.1:13553394-13553413 | MS.gene67472:intron | 25.0% |
| !! | AATTTTATGTCAATGTTCAC+AGG | + | chr5.1:13556543-13556562 | MS.gene67472:intron | 25.0% |
| !! | AGAGTAATAGAGCATTATAA+AGG | - | chr5.1:13554476-13554495 | None:intergenic | 25.0% |
| !! | ATTTATCTTTTATCTCTGGT+AGG | - | chr5.1:13555029-13555048 | None:intergenic | 25.0% |
| !! | TACGAAAATGGTATAGTTTT+AGG | - | chr5.1:13554374-13554393 | None:intergenic | 25.0% |
| !!! | AGTTAGTGACATTTTAAAAC+AGG | + | chr5.1:13556624-13556643 | MS.gene67472:CDS | 25.0% |
| !!! | CTTTTAAAAAACTGTAGTAG+TGG | - | chr5.1:13554202-13554221 | None:intergenic | 25.0% |
| !!! | GATTTTAATGTTCTTTCTCA+TGG | + | chr5.1:13556379-13556398 | MS.gene67472:intron | 25.0% |
| !!! | TAACAAGTTTTCAAGAGAAT+TGG | + | chr5.1:13552708-13552727 | MS.gene67472:intron | 25.0% |
| !!! | TACATTTGTTTCTATTCTGA+GGG | + | chr5.1:13556519-13556538 | MS.gene67472:intron | 25.0% |
| !!! | TTACATTTGTTTCTATTCTG+AGG | + | chr5.1:13556518-13556537 | MS.gene67472:intron | 25.0% |
| AAACAGTAAAACTACTCACA+TGG | - | chr5.1:13554653-13554672 | None:intergenic | 30.0% | |
| AAATCAACGTTAACAATGGT+GGG | - | chr5.1:13552203-13552222 | None:intergenic | 30.0% | |
| AGAAGGATAAATCAGAAGTT+AGG | - | chr5.1:13555656-13555675 | None:intergenic | 30.0% | |
| AGAATTAGTTACAATTGGTG+AGG | - | chr5.1:13555154-13555173 | None:intergenic | 30.0% | |
| AGACAATATAACACGAAATG+GGG | - | chr5.1:13556202-13556221 | None:intergenic | 30.0% | |
| AGACATACAAATGTATAACC+TGG | - | chr5.1:13554750-13554769 | None:intergenic | 30.0% | |
| AGGGAAGAATTAGTTACAAT+TGG | - | chr5.1:13555159-13555178 | None:intergenic | 30.0% | |
| AGTAGGACACTATACAATTA+GGG | - | chr5.1:13553121-13553140 | None:intergenic | 30.0% | |
| ATAAACCTGAACTTCTTCAA+AGG | + | chr5.1:13552267-13552286 | MS.gene67472:CDS | 30.0% | |
| ATAAGTAGGCTGAGAAATTA+TGG | - | chr5.1:13556233-13556252 | None:intergenic | 30.0% | |
| ATGCTCCAAATGTTAGAATA+AGG | + | chr5.1:13556116-13556135 | MS.gene67472:intron | 30.0% | |
| ATGGTCAGCATATTAAACAA+TGG | - | chr5.1:13555406-13555425 | None:intergenic | 30.0% | |
| ATGTACAGATACTACGAAAA+TGG | - | chr5.1:13554386-13554405 | None:intergenic | 30.0% | |
| ATTAGATACATTACCAGAGA+GGG | + | chr5.1:13553868-13553887 | MS.gene67472:CDS | 30.0% | |
| CATGTAATGTGAAGTCAAAA+AGG | - | chr5.1:13554128-13554147 | None:intergenic | 30.0% | |
| CCAAGAAAAGGAATAACAAA+GGG | + | chr5.1:13554982-13555001 | MS.gene67472:intron | 30.0% | |
| CCATATATCTCAGCTTAAAA+AGG | - | chr5.1:13555537-13555556 | None:intergenic | 30.0% | |
| GAAAAATATGCAGGCATTAA+TGG | + | chr5.1:13553964-13553983 | MS.gene67472:CDS | 30.0% | |
| GAAGGATAAATCAGAAGTTA+GGG | - | chr5.1:13555655-13555674 | None:intergenic | 30.0% | |
| GAATAAAATTAACACCACGT+AGG | - | chr5.1:13553576-13553595 | None:intergenic | 30.0% | |
| GACATACAAATGTATAACCT+GGG | - | chr5.1:13554749-13554768 | None:intergenic | 30.0% | |
| GCTTAAACAACATTCATTGA+AGG | - | chr5.1:13555789-13555808 | None:intergenic | 30.0% | |
| TAAGTAGGCTGAGAAATTAT+GGG | - | chr5.1:13556232-13556251 | None:intergenic | 30.0% | |
| TATAAAGTATGGGCTCATTA+GGG | + | chr5.1:13553916-13553935 | MS.gene67472:CDS | 30.0% | |
| TATAAATTACAACTGCCTGA+GGG | - | chr5.1:13555581-13555600 | None:intergenic | 30.0% | |
| TATAATAATAGGCATGTCCA+TGG | + | chr5.1:13553201-13553220 | MS.gene67472:intron | 30.0% | |
| TCAGCATATTAAACAATGGA+TGG | - | chr5.1:13555402-13555421 | None:intergenic | 30.0% | |
| TCTACATGGTGCAATTTAAT+TGG | - | chr5.1:13552453-13552472 | None:intergenic | 30.0% | |
| TTATAAAGTATGGGCTCATT+AGG | + | chr5.1:13553915-13553934 | MS.gene67472:CDS | 30.0% | |
| TTGAATTTGGGTCATACATT+TGG | + | chr5.1:13554627-13554646 | MS.gene67472:CDS | 30.0% | |
| TTGAGACTTATCCTTCTAAA+AGG | + | chr5.1:13556823-13556842 | MS.gene67472:CDS | 30.0% | |
| ! | AAATTGCTACTTAAAGCGAA+AGG | - | chr5.1:13552882-13552901 | None:intergenic | 30.0% |
| ! | AAGATAGATTTCTCCTTTTC+CGG | + | chr5.1:13555735-13555754 | MS.gene67472:intron | 30.0% |
| ! | AATTACCTTTGAAGAAGTTC+AGG | - | chr5.1:13552275-13552294 | None:intergenic | 30.0% |
| ! | ACTCAAAGTAAGATTTTACC+TGG | - | chr5.1:13553990-13554009 | None:intergenic | 30.0% |
| ! | ATCATAAAATCGGCGATTTT+TGG | + | chr5.1:13556070-13556089 | MS.gene67472:intron | 30.0% |
| ! | GGAGATTTATCTTTTATCTC+TGG | - | chr5.1:13555033-13555052 | None:intergenic | 30.0% |
| ! | GTGAGGATTATTCATGTTTT+GGG | - | chr5.1:13555071-13555090 | None:intergenic | 30.0% |
| ! | TAGAGCATTATAAAGGCAAT+TGG | - | chr5.1:13554469-13554488 | None:intergenic | 30.0% |
| ! | TCTAGGAAATTGTGTTTTCA+CGG | + | chr5.1:13556849-13556868 | MS.gene67472:CDS | 30.0% |
| ! | TGCCGATAATTTGTAAAAGT+TGG | - | chr5.1:13554500-13554519 | None:intergenic | 30.0% |
| ! | TGTGAGGATTATTCATGTTT+TGG | - | chr5.1:13555072-13555091 | None:intergenic | 30.0% |
| ! | TTACTTGGGAAATGTACTTT+TGG | + | chr5.1:13554078-13554097 | MS.gene67472:intron | 30.0% |
| !! | ACCATTGTTAACGTTGATTT+GGG | + | chr5.1:13552203-13552222 | MS.gene67472:CDS | 30.0% |
| !! | ATCTTTTGAAAAAGGGGAAT+GGG | - | chr5.1:13555720-13555739 | None:intergenic | 30.0% |
| !! | CCTTTTTAAGCTGAGATATA+TGG | + | chr5.1:13555534-13555553 | MS.gene67472:intron | 30.0% |
| !! | GCGATTTTTGGATTTACATT+GGG | + | chr5.1:13556082-13556101 | MS.gene67472:intron | 30.0% |
| !! | TATCTTTTGAAAAAGGGGAA+TGG | - | chr5.1:13555721-13555740 | None:intergenic | 30.0% |
| !! | TCTTATGAAAGTGTTTGACA+AGG | + | chr5.1:13553459-13553478 | MS.gene67472:CDS | 30.0% |
| !! | TGTTGAGAGTGTAATTTTAC+CGG | + | chr5.1:13553317-13553336 | MS.gene67472:CDS | 30.0% |
| !! | TTAACGTTGATTTGGGTAAT+CGG | + | chr5.1:13552210-13552229 | MS.gene67472:CDS | 30.0% |
| !!! | ACACCTTTTGAAACTGTTTA+TGG | - | chr5.1:13555908-13555927 | None:intergenic | 30.0% |
| !!! | CACCTTTTGAAACTGTTTAT+GGG | - | chr5.1:13555907-13555926 | None:intergenic | 30.0% |
| !!! | CCTTTGTTATTCCTTTTCTT+GGG | - | chr5.1:13554984-13555003 | None:intergenic | 30.0% |
| !!! | CTTTGTTATTCCTTTTCTTG+GGG | - | chr5.1:13554983-13555002 | None:intergenic | 30.0% |
| AAAGCGATCATGTGAAAACA+AGG | + | chr5.1:13554557-13554576 | MS.gene67472:CDS | 35.0% | |
| AACCCTGATCCGATATAAAT+GGG | - | chr5.1:13552242-13552261 | None:intergenic | 35.0% | |
| AAGTAGGCTGAGAAATTATG+GGG | - | chr5.1:13556231-13556250 | None:intergenic | 35.0% | |
| AATCAACGTTAACAATGGTG+GGG | - | chr5.1:13552202-13552221 | None:intergenic | 35.0% | |
| ACAACCTTGTCTAGATACAA+AGG | - | chr5.1:13553264-13553283 | None:intergenic | 35.0% | |
| ACACTCTCAACAGAAACATT+TGG | - | chr5.1:13553309-13553328 | None:intergenic | 35.0% | |
| ACATGGAAGAAGCTAGTAAT+AGG | - | chr5.1:13554040-13554059 | None:intergenic | 35.0% | |
| ACCCAAATCAACGTTAACAA+TGG | - | chr5.1:13552207-13552226 | None:intergenic | 35.0% | |
| AGACGAGAAAAAATCTCAAG+AGG | + | chr5.1:13553035-13553054 | MS.gene67472:intron | 35.0% | |
| AGCTGAGATATATGGAAAAC+CGG | + | chr5.1:13555542-13555561 | MS.gene67472:intron | 35.0% | |
| ATACAATTAGGGATGGCAAA+AGG | - | chr5.1:13553110-13553129 | None:intergenic | 35.0% | |
| ATCATGAGGTAGTTTCTTGT+GGG | + | chr5.1:13552810-13552829 | MS.gene67472:intron | 35.0% | |
| ATCCCATTTATATCGGATCA+GGG | + | chr5.1:13552237-13552256 | MS.gene67472:CDS | 35.0% | |
| ATGTAACAGTGTAACAGACA+TGG | - | chr5.1:13554057-13554076 | None:intergenic | 35.0% | |
| ATGTCAATGTTCACAGGTAA+TGG | + | chr5.1:13556549-13556568 | MS.gene67472:intron | 35.0% | |
| ATTAGTTACAATTGGTGAGG+TGG | - | chr5.1:13555151-13555170 | None:intergenic | 35.0% | |
| ATTCTATGCACAATCTGGAT+CGG | + | chr5.1:13556033-13556052 | MS.gene67472:intron | 35.0% | |
| CAAATCAACGTTAACAATGG+TGG | - | chr5.1:13552204-13552223 | None:intergenic | 35.0% | |
| CAAGGTTCTATATTTAGGGA+TGG | - | chr5.1:13552621-13552640 | None:intergenic | 35.0% | |
| CACTCTCAACAGAAACATTT+GGG | - | chr5.1:13553308-13553327 | None:intergenic | 35.0% | |
| CATGTTTAAATCTGTCATGG+CGG | + | chr5.1:13556687-13556706 | MS.gene67472:CDS | 35.0% | |
| CATTAGATACATTACCAGAG+AGG | + | chr5.1:13553867-13553886 | MS.gene67472:CDS | 35.0% | |
| CATTGTAATGCCACTCTTAT+AGG | - | chr5.1:13552503-13552522 | None:intergenic | 35.0% | |
| CCCAAGAAAAGGAATAACAA+AGG | + | chr5.1:13554981-13555000 | MS.gene67472:intron | 35.0% | |
| CCTTATTGTCACTAACACTA+CGG | + | chr5.1:13553233-13553252 | MS.gene67472:CDS | 35.0% | |
| CTCAGCTTAAAAAGGCTATA+GGG | - | chr5.1:13555529-13555548 | None:intergenic | 35.0% | |
| CTCCCATAAACAGTTTCAAA+AGG | + | chr5.1:13555902-13555921 | MS.gene67472:intron | 35.0% | |
| CTGATTTATCCTTCTTGCTA+TGG | + | chr5.1:13555661-13555680 | MS.gene67472:intron | 35.0% | |
| GAGTAGGACACTATACAATT+AGG | - | chr5.1:13553122-13553141 | None:intergenic | 35.0% | |
| GGACATGTTTAAATCTGTCA+TGG | + | chr5.1:13556684-13556703 | MS.gene67472:CDS | 35.0% | |
| GTAAAAAAGCTTTACACCGA+CGG | + | chr5.1:13552543-13552562 | MS.gene67472:intron | 35.0% | |
| GTATAAATTACAACTGCCTG+AGG | - | chr5.1:13555582-13555601 | None:intergenic | 35.0% | |
| GTGCATGTTTGTAATTGAGT+AGG | - | chr5.1:13553138-13553157 | None:intergenic | 35.0% | |
| GTTGTTGATGCTTTAACAAG+TGG | + | chr5.1:13553279-13553298 | MS.gene67472:CDS | 35.0% | |
| TATCCCATTTATATCGGATC+AGG | + | chr5.1:13552236-13552255 | MS.gene67472:CDS | 35.0% | |
| TCAAGAGGCTCAGATATTTA+GGG | + | chr5.1:13553050-13553069 | MS.gene67472:intron | 35.0% | |
| TCTCAGCTTAAAAAGGCTAT+AGG | - | chr5.1:13555530-13555549 | None:intergenic | 35.0% | |
| TGTGTTTCGTGAACTATTCA+TGG | - | chr5.1:13552749-13552768 | None:intergenic | 35.0% | |
| TTAAACAATGGATGGTGAAG+TGG | - | chr5.1:13555394-13555413 | None:intergenic | 35.0% | |
| ! | ATCCTTCTAAAAGGTTCTCT+AGG | + | chr5.1:13556832-13556851 | MS.gene67472:CDS | 35.0% |
| ! | ATGTTGTTTAAGCTGTCTCA+AGG | + | chr5.1:13555796-13555815 | MS.gene67472:intron | 35.0% |
| ! | CAATTGACTTTGTTGCTGTT+CGG | + | chr5.1:13552775-13552794 | MS.gene67472:intron | 35.0% |
| ! | CACCATTGTTAACGTTGATT+TGG | + | chr5.1:13552202-13552221 | MS.gene67472:CDS | 35.0% |
| ! | CTAGGAAATTGTGTTTTCAC+GGG | + | chr5.1:13556850-13556869 | MS.gene67472:CDS | 35.0% |
| ! | CTATGAAAAAGTATGCTGAC+CGG | - | chr5.1:13555757-13555776 | None:intergenic | 35.0% |
| ! | TAGAGGAGAGAGTATGTAAT+GGG | - | chr5.1:13555107-13555126 | None:intergenic | 35.0% |
| ! | TTAGAGGAGAGAGTATGTAA+TGG | - | chr5.1:13555108-13555127 | None:intergenic | 35.0% |
| ! | TTCCTAGAGAACCTTTTAGA+AGG | - | chr5.1:13556837-13556856 | None:intergenic | 35.0% |
| ! | TTTTGCTGAGTTAGTTGACA+GGG | - | chr5.1:13555828-13555847 | None:intergenic | 35.0% |
| ! | TTTTTGCTGAGTTAGTTGAC+AGG | - | chr5.1:13555829-13555848 | None:intergenic | 35.0% |
| !! | AATGTACTTTTGGCTGGAAA+AGG | + | chr5.1:13554088-13554107 | MS.gene67472:intron | 35.0% |
| !! | GATTAATTTGCATATGCCGT+CGG | - | chr5.1:13552562-13552581 | None:intergenic | 35.0% |
| !! | GGCGATTTTTGGATTTACAT+TGG | + | chr5.1:13556081-13556100 | MS.gene67472:intron | 35.0% |
| !! | GGTATATCAGGTTGATAAGA+AGG | + | chr5.1:13556786-13556805 | MS.gene67472:intron | 35.0% |
| !! | TTGTAGGTTGATTCTTCAGT+TGG | + | chr5.1:13553758-13553777 | MS.gene67472:intron | 35.0% |
| !!! | CATGTTTTGGGATACTTTGT+TGG | - | chr5.1:13555059-13555078 | None:intergenic | 35.0% |
| !!! | CCCTTTGTTATTCCTTTTCT+TGG | - | chr5.1:13554985-13555004 | None:intergenic | 35.0% |
| !!! | CTTTTGAAACTGTTTATGGG+AGG | - | chr5.1:13555904-13555923 | None:intergenic | 35.0% |
| !!! | GGGATACAGAATTTTTTGAG+TGG | + | chr5.1:13553936-13553955 | MS.gene67472:CDS | 35.0% |
| !!! | TTTCTCATGGCACCTTTTTT+AGG | + | chr5.1:13556392-13556411 | MS.gene67472:intron | 35.0% |
| AACCAAAGAATTGGTCGTAC+TGG | - | chr5.1:13555985-13556004 | None:intergenic | 40.0% | |
| AATATCTGCTAGGTGGTTAG+AGG | - | chr5.1:13555124-13555143 | None:intergenic | 40.0% | |
| ACATACACTTTCCAAACAGC+TGG | + | chr5.1:13555200-13555219 | MS.gene67472:intron | 40.0% | |
| ACCAATCAAGTTCTTCCCAA+GGG | - | chr5.1:13553807-13553826 | None:intergenic | 40.0% | |
| ACTTTGCATCCGATTGAGTA+AGG | - | chr5.1:13554350-13554369 | None:intergenic | 40.0% | |
| AGCAGAAGAAGACACTACTT+GGG | - | chr5.1:13555363-13555382 | None:intergenic | 40.0% | |
| AGTAGGCTGAGAAATTATGG+GGG | - | chr5.1:13556230-13556249 | None:intergenic | 40.0% | |
| AGTCAGGGCTACATTGAATT+TGG | + | chr5.1:13554614-13554633 | MS.gene67472:CDS | 40.0% | |
| AGTGTATGTCAGGAAAAGGA+AGG | - | chr5.1:13555189-13555208 | None:intergenic | 40.0% | |
| AGTTTCTTGTGGGTGATACA+TGG | + | chr5.1:13552820-13552839 | MS.gene67472:intron | 40.0% | |
| ATAGCATATGCCAGTGCATT+AGG | - | chr5.1:13554537-13554556 | None:intergenic | 40.0% | |
| ATCCAGTACGACCAATTCTT+TGG | + | chr5.1:13555980-13555999 | MS.gene67472:intron | 40.0% | |
| ATGTCCACAGTCATCATTTC+AGG | - | chr5.1:13556670-13556689 | None:intergenic | 40.0% | |
| CAACCCTGATCCGATATAAA+TGG | - | chr5.1:13552243-13552262 | None:intergenic | 40.0% | |
| CAATAAGGACCTTCTTTCCA+TGG | - | chr5.1:13553221-13553240 | None:intergenic | 40.0% | |
| CATGGAAATTGAGCTATGAC+AGG | - | chr5.1:13554320-13554339 | None:intergenic | 40.0% | |
| CCGTAGTGTTAGTGACAATA+AGG | - | chr5.1:13553236-13553255 | None:intergenic | 40.0% | |
| CGAACAGCAACAAAGTCAAT+TGG | - | chr5.1:13552777-13552796 | None:intergenic | 40.0% | |
| CGATGCAAAACACCTCAAAA+CGG | + | chr5.1:13556009-13556028 | MS.gene67472:intron | 40.0% | |
| CGGAGCTATCCCATTTATAT+CGG | + | chr5.1:13552230-13552249 | MS.gene67472:CDS | 40.0% | |
| CTATAAGCACACATTGAGGT+TGG | - | chr5.1:13553838-13553857 | None:intergenic | 40.0% | |
| CTCAAGAGGCTCAGATATTT+AGG | + | chr5.1:13553049-13553068 | MS.gene67472:intron | 40.0% | |
| CTTTGCATCCGATTGAGTAA+GGG | - | chr5.1:13554349-13554368 | None:intergenic | 40.0% | |
| GATCATGAGGTAGTTTCTTG+TGG | + | chr5.1:13552809-13552828 | MS.gene67472:intron | 40.0% | |
| GATGCAAAACACCTCAAAAC+GGG | + | chr5.1:13556010-13556029 | MS.gene67472:intron | 40.0% | |
| GCTGAGATATATGGAAAACC+GGG | + | chr5.1:13555543-13555562 | MS.gene67472:intron | 40.0% | |
| GGACACTATACAATTAGGGA+TGG | - | chr5.1:13553117-13553136 | None:intergenic | 40.0% | |
| GTCAGGGCTACATTGAATTT+GGG | + | chr5.1:13554615-13554634 | MS.gene67472:CDS | 40.0% | |
| GTGGCAAGAGAAAAATATGC+AGG | + | chr5.1:13553955-13553974 | MS.gene67472:CDS | 40.0% | |
| GTGTATGTCAGGAAAAGGAA+GGG | - | chr5.1:13555188-13555207 | None:intergenic | 40.0% | |
| GTGTCTATAAGCACACATTG+AGG | - | chr5.1:13553842-13553861 | None:intergenic | 40.0% | |
| GTTTCTTGTGGGTGATACAT+GGG | + | chr5.1:13552821-13552840 | MS.gene67472:intron | 40.0% | |
| TAAATCAGAAGTTAGGGCTC+AGG | - | chr5.1:13555649-13555668 | None:intergenic | 40.0% | |
| TAGAATCATCAATCCAACCG+AGG | - | chr5.1:13556594-13556613 | None:intergenic | 40.0% | |
| TAGGAAGTAGCCTATAAGAG+TGG | + | chr5.1:13552490-13552509 | MS.gene67472:intron | 40.0% | |
| TAGGCAATAGAAACTAGCGT+TGG | + | chr5.1:13556411-13556430 | MS.gene67472:intron | 40.0% | |
| TCAGATTCCAACCACTGTTA+TGG | + | chr5.1:13553594-13553613 | MS.gene67472:CDS | 40.0% | |
| TCCAGACTTTCATGTGGATA+CGG | - | chr5.1:13555243-13555262 | None:intergenic | 40.0% | |
| TGATTGCGTGTTCAACTGAT+AGG | + | chr5.1:13553432-13553451 | MS.gene67472:intron | 40.0% | |
| TGCACCTTTGTATCTAGACA+AGG | + | chr5.1:13553257-13553276 | MS.gene67472:CDS | 40.0% | |
| TGTATGTCAGGAAAAGGAAG+GGG | - | chr5.1:13555187-13555206 | None:intergenic | 40.0% | |
| TGTCATAGACTTGAACCATC+AGG | - | chr5.1:13553694-13553713 | None:intergenic | 40.0% | |
| TTAAATCTGTCATGGCGGTA+TGG | + | chr5.1:13556692-13556711 | MS.gene67472:intron | 40.0% | |
| TTTCCAGCAAAAATCCAACC+TGG | + | chr5.1:13552173-13552192 | MS.gene67472:CDS | 40.0% | |
| TTTCTTGTGGGTGATACATG+GGG | + | chr5.1:13552822-13552841 | MS.gene67472:intron | 40.0% | |
| ! | AAAAGTATGCTGACCGGAAA+AGG | - | chr5.1:13555751-13555770 | None:intergenic | 40.0% |
| ! | AGAGGAGAGAGTATGTAATG+GGG | - | chr5.1:13555106-13555125 | None:intergenic | 40.0% |
| ! | AGAGTATGTAATGGGGTGAT+GGG | - | chr5.1:13555099-13555118 | None:intergenic | 40.0% |
| ! | AGGTTGGATTTTTGCTGGAA+AGG | - | chr5.1:13552174-13552193 | None:intergenic | 40.0% |
| ! | ATCATTTCAGGAGGCACAAT+TGG | - | chr5.1:13556658-13556677 | None:intergenic | 40.0% |
| ! | CTGTTTGGAAAGTGTATGTC+AGG | - | chr5.1:13555199-13555218 | None:intergenic | 40.0% |
| ! | GGAAAGTGTATGTCAGGAAA+AGG | - | chr5.1:13555193-13555212 | None:intergenic | 40.0% |
| ! | GGGAAATTGACTTTGCAACA+AGG | + | chr5.1:13555328-13555347 | MS.gene67472:intron | 40.0% |
| ! | GGTTGGATTTTTGCTGGAAA+GGG | - | chr5.1:13552173-13552192 | None:intergenic | 40.0% |
| ! | GTTGATAAGAAGGTAGCAGA+TGG | + | chr5.1:13556796-13556815 | MS.gene67472:CDS | 40.0% |
| ! | GTTGGATTTTTGCTGGAAAG+GGG | - | chr5.1:13552172-13552191 | None:intergenic | 40.0% |
| ! | TTGGGAAATGTACTTTTGGC+TGG | + | chr5.1:13554082-13554101 | MS.gene67472:intron | 40.0% |
| ! | TTTGGGATACTTTGTTGGCT+AGG | - | chr5.1:13555054-13555073 | None:intergenic | 40.0% |
| !! | ATAGAAACTAGCGTTGGCTA+TGG | + | chr5.1:13556417-13556436 | MS.gene67472:CDS | 40.0% |
| !! | GAGAGTGTAATTTTACCGGA+TGG | + | chr5.1:13553321-13553340 | MS.gene67472:CDS | 40.0% |
| !! | GGAGTATTGATAGGACTCAT+GGG | - | chr5.1:13555271-13555290 | None:intergenic | 40.0% |
| !! | TAGAAACTAGCGTTGGCTAT+GGG | + | chr5.1:13556418-13556437 | MS.gene67472:CDS | 40.0% |
| !! | TAGGTTGATTCTTCAGTTGG+TGG | + | chr5.1:13553761-13553780 | MS.gene67472:intron | 40.0% |
| !! | TGAACAGTTGTTGGCTTCAA+GGG | - | chr5.1:13555441-13555460 | None:intergenic | 40.0% |
| !!! | CGTTTTGAGGTGTTTTGCAT+CGG | - | chr5.1:13556011-13556030 | None:intergenic | 40.0% |
| AACACCACGTAGGAATGAAG+CGG | - | chr5.1:13553566-13553585 | None:intergenic | 45.0% | |
| AAGTTAGGGCTCAGGTTCTT+CGG | - | chr5.1:13555641-13555660 | None:intergenic | 45.0% | |
| AATCATCAATCCAACCGAGG+CGG | - | chr5.1:13556591-13556610 | None:intergenic | 45.0% | |
| ACGGGATTCTATGCACAATC+TGG | + | chr5.1:13556028-13556047 | MS.gene67472:intron | 45.0% | |
| ACTGGTATAAACCATCCCCT+TGG | + | chr5.1:13553788-13553807 | MS.gene67472:CDS | 45.0% | |
| AGCAAAAACAGCCTCAACTC+TGG | + | chr5.1:13555841-13555860 | MS.gene67472:intron | 45.0% | |
| AGGCTCAGATATTTAGGGAC+AGG | + | chr5.1:13553055-13553074 | MS.gene67472:intron | 45.0% | |
| AGGTGGCATGAATATCTGCT+AGG | - | chr5.1:13555134-13555153 | None:intergenic | 45.0% | |
| ATATGCAGGCATTAATGGCC+AGG | + | chr5.1:13553969-13553988 | MS.gene67472:CDS | 45.0% | |
| ATCATGTGAAAACAAGGCCG+AGG | + | chr5.1:13554563-13554582 | MS.gene67472:CDS | 45.0% | |
| ATTCTTTCCACCACCGGAAA+AGG | + | chr5.1:13555614-13555633 | MS.gene67472:intron | 45.0% | |
| ATTGGTCGTACTGGATTCCA+TGG | - | chr5.1:13555976-13555995 | None:intergenic | 45.0% | |
| ATTTCCCAATCTGAGCCTTG+AGG | - | chr5.1:13555315-13555334 | None:intergenic | 45.0% | |
| CAATGGATGGTGAAGTGGAA+AGG | - | chr5.1:13555389-13555408 | None:intergenic | 45.0% | |
| CACCAATCAAGTTCTTCCCA+AGG | - | chr5.1:13553808-13553827 | None:intergenic | 45.0% | |
| CACGGGAGAATATGACAGAA+AGG | + | chr5.1:13556867-13556886 | MS.gene67472:CDS | 45.0% | |
| CATCGGAGCAACCAAAGAAT+TGG | - | chr5.1:13555994-13556013 | None:intergenic | 45.0% | |
| CCAATCAAGTTCTTCCCAAG+GGG | - | chr5.1:13553806-13553825 | None:intergenic | 45.0% | |
| CCAGACTTTCATGTGGATAC+GGG | - | chr5.1:13555242-13555261 | None:intergenic | 45.0% | |
| CCATTGAGTCTCGATTGGAT+CGG | + | chr5.1:13553482-13553501 | MS.gene67472:CDS | 45.0% | |
| CTGGTATAAACCATCCCCTT+GGG | + | chr5.1:13553789-13553808 | MS.gene67472:CDS | 45.0% | |
| CTTGAAGCCAACAACTGTTC+AGG | + | chr5.1:13555440-13555459 | MS.gene67472:intron | 45.0% | |
| GAGCAGAAGAAGACACTACT+TGG | - | chr5.1:13555364-13555383 | None:intergenic | 45.0% | |
| GATATCGTGATGTTTACGCG+AGG | + | chr5.1:13552853-13552872 | MS.gene67472:intron | 45.0% | |
| GATCCTATTCTTTCCACCAC+CGG | + | chr5.1:13555608-13555627 | MS.gene67472:intron | 45.0% | |
| GCAAGGAAAAACCAGAGTTG+AGG | - | chr5.1:13555855-13555874 | None:intergenic | 45.0% | |
| GGAATAAACGCGAGATCATG+AGG | + | chr5.1:13552796-13552815 | MS.gene67472:intron | 45.0% | |
| GTATGTCAGGAAAAGGAAGG+GGG | - | chr5.1:13555186-13555205 | None:intergenic | 45.0% | |
| GTGCATTAGGATCTCTGCAA+TGG | - | chr5.1:13554524-13554543 | None:intergenic | 45.0% | |
| TAAGACCTGTGCCATAACAG+TGG | - | chr5.1:13553608-13553627 | None:intergenic | 45.0% | |
| TACATTACCAGAGAGGGAAC+TGG | + | chr5.1:13553874-13553893 | MS.gene67472:CDS | 45.0% | |
| TAGGCATGTCCATGGAAAGA+AGG | + | chr5.1:13553209-13553228 | MS.gene67472:intron | 45.0% | |
| TATGCGCTGTGTTATCCTGA+TGG | + | chr5.1:13553676-13553695 | MS.gene67472:intron | 45.0% | |
| TATGTCAGGAAAAGGAAGGG+GGG | - | chr5.1:13555185-13555204 | None:intergenic | 45.0% | |
| TCAAGGGAAGTCGTAAAGGA+TGG | - | chr5.1:13555425-13555444 | None:intergenic | 45.0% | |
| TCCACAGTCATCATTTCAGG+AGG | - | chr5.1:13556667-13556686 | None:intergenic | 45.0% | |
| TCCACATGAAAGTCTGGATC+AGG | + | chr5.1:13555245-13555264 | MS.gene67472:intron | 45.0% | |
| TGGCATGAATATCTGCTAGG+TGG | - | chr5.1:13555131-13555150 | None:intergenic | 45.0% | |
| TGTGTGCTCCCTTACTCAAT+CGG | + | chr5.1:13554338-13554357 | MS.gene67472:intron | 45.0% | |
| TTCTTTCCACCACCGGAAAA+GGG | + | chr5.1:13555615-13555634 | MS.gene67472:intron | 45.0% | |
| TTGCAGAGATCCTAATGCAC+TGG | + | chr5.1:13554524-13554543 | MS.gene67472:intron | 45.0% | |
| TTGGTCGTACTGGATTCCAT+GGG | - | chr5.1:13555975-13555994 | None:intergenic | 45.0% | |
| TTGTACCACAATTCTGCCCA+TGG | + | chr5.1:13555956-13555975 | MS.gene67472:intron | 45.0% | |
| TTGTCCTCAAGGCTCAGATT+GGG | + | chr5.1:13555308-13555327 | MS.gene67472:intron | 45.0% | |
| ! | ACAACATTCATTGAAGGCGC+AGG | - | chr5.1:13555783-13555802 | None:intergenic | 45.0% |
| ! | ATTGAGTAAGGGAGCACACA+TGG | - | chr5.1:13554338-13554357 | None:intergenic | 45.0% |
| ! | CGCTCTTTTACCCCAAGAAA+AGG | + | chr5.1:13554970-13554989 | MS.gene67472:intron | 45.0% |
| ! | GAGAGTATGTAATGGGGTGA+TGG | - | chr5.1:13555100-13555119 | None:intergenic | 45.0% |
| ! | GAGTATGTAATGGGGTGATG+GGG | - | chr5.1:13555098-13555117 | None:intergenic | 45.0% |
| ! | GTGCATAGAATCCCGTTTTG+AGG | - | chr5.1:13556024-13556043 | None:intergenic | 45.0% |
| !! | ACACCAGGTTGGATTTTTGC+TGG | - | chr5.1:13552179-13552198 | None:intergenic | 45.0% |
| !! | ACCACTTTTCATGCTTCGAC+GGG | - | chr5.1:13555935-13555954 | None:intergenic | 45.0% |
| !! | CACCACTTTTCATGCTTCGA+CGG | - | chr5.1:13555936-13555955 | None:intergenic | 45.0% |
| !! | CTGAACAGTTGTTGGCTTCA+AGG | - | chr5.1:13555442-13555461 | None:intergenic | 45.0% |
| !! | GGGAGTATTGATAGGACTCA+TGG | - | chr5.1:13555272-13555291 | None:intergenic | 45.0% |
| !! | TCTTCAGTTGGTGGCAAAAC+TGG | + | chr5.1:13553770-13553789 | MS.gene67472:CDS | 45.0% |
| !! | TGGAAAAGGCATCTCTAGCT+TGG | + | chr5.1:13554102-13554121 | MS.gene67472:intron | 45.0% |
| !! | TTCTTGCTATGGTTTGCTGC+CGG | + | chr5.1:13555672-13555691 | MS.gene67472:intron | 45.0% |
| !! | TTTCCGGTGGTGGAAAGAAT+AGG | - | chr5.1:13555614-13555633 | None:intergenic | 45.0% |
| !! | TTTAAAAGAAAATTAAAATA+GGG | + | chr5.1:13554214-13554233 | MS.gene67472:intron | 5.0% |
| !!! | TTTTAAAAGAAAATTAAAAT+AGG | + | chr5.1:13554213-13554232 | MS.gene67472:intron | 5.0% |
| AACAGACTTGCCAGAAGGGT+TGG | - | chr5.1:13555492-13555511 | None:intergenic | 50.0% | |
| ACCTGTGCCATAACAGTGGT+TGG | - | chr5.1:13553604-13553623 | None:intergenic | 50.0% | |
| ATGAGAGAGAAGGTGGAGTC+AGG | + | chr5.1:13554598-13554617 | MS.gene67472:CDS | 50.0% | |
| ATGCACAATCTGGATCGGTG+AGG | + | chr5.1:13556038-13556057 | MS.gene67472:intron | 50.0% | |
| ATGGAAAACCGGGTGAACTC+TGG | + | chr5.1:13555553-13555572 | MS.gene67472:intron | 50.0% | |
| CAAGGCCATTGAGTCTCGAT+TGG | + | chr5.1:13553477-13553496 | MS.gene67472:CDS | 50.0% | |
| CCACAACAGACTTGCCAGAA+GGG | - | chr5.1:13555496-13555515 | None:intergenic | 50.0% | |
| CCCCTTGGGAAGAACTTGAT+TGG | + | chr5.1:13553803-13553822 | MS.gene67472:CDS | 50.0% | |
| CCCGTATCCACATGAAAGTC+TGG | + | chr5.1:13555239-13555258 | MS.gene67472:intron | 50.0% | |
| CCGATCCAATCGAGACTCAA+TGG | - | chr5.1:13553485-13553504 | None:intergenic | 50.0% | |
| CCTTGCAAGAATCGAACCAG+AGG | + | chr5.1:13555869-13555888 | MS.gene67472:intron | 50.0% | |
| CGAGGAACCTGAACAGTTGT+TGG | - | chr5.1:13555450-13555469 | None:intergenic | 50.0% | |
| CTCATCCAAGGACACAACCT+CGG | - | chr5.1:13554583-13554602 | None:intergenic | 50.0% | |
| CTGGTAGGAGTCATAGACTC+TGG | - | chr5.1:13555014-13555033 | None:intergenic | 50.0% | |
| CTTGTCCTCAAGGCTCAGAT+TGG | + | chr5.1:13555307-13555326 | MS.gene67472:intron | 50.0% | |
| GCCTCCTGAAATGATGACTG+TGG | + | chr5.1:13556663-13556682 | MS.gene67472:CDS | 50.0% | |
| GCCTGATCCAGACTTTCATG+TGG | - | chr5.1:13555249-13555268 | None:intergenic | 50.0% | |
| GGATTCCATGGGCAGAATTG+TGG | - | chr5.1:13555964-13555983 | None:intergenic | 50.0% | |
| GGCAGCAAACCATAGCAAGA+AGG | - | chr5.1:13555673-13555692 | None:intergenic | 50.0% | |
| GGCTTCAAGGGAAGTCGTAA+AGG | - | chr5.1:13555429-13555448 | None:intergenic | 50.0% | |
| GTGTCCTTGGATGAGAGAGA+AGG | + | chr5.1:13554588-13554607 | MS.gene67472:CDS | 50.0% | |
| GTTGACATGTCATACCGCCT+CGG | + | chr5.1:13556574-13556593 | MS.gene67472:CDS | 50.0% | |
| TCAAGTTCTTCCCAAGGGGA+TGG | - | chr5.1:13553802-13553821 | None:intergenic | 50.0% | |
| TCCAACCACTGTTATGGCAC+AGG | + | chr5.1:13553600-13553619 | MS.gene67472:CDS | 50.0% | |
| TCCACCTTCTCTCTCATCCA+AGG | - | chr5.1:13554595-13554614 | None:intergenic | 50.0% | |
| TCCTTGGATGAGAGAGAAGG+TGG | + | chr5.1:13554591-13554610 | MS.gene67472:CDS | 50.0% | |
| TCCTTGTACTGCTCACCATC+CGG | - | chr5.1:13553339-13553358 | None:intergenic | 50.0% | |
| TGAGAGAGAAGGTGGAGTCA+GGG | + | chr5.1:13554599-13554618 | MS.gene67472:CDS | 50.0% | |
| TGCAAGAATCGAACCAGAGG+CGG | + | chr5.1:13555872-13555891 | MS.gene67472:intron | 50.0% | |
| TGGTGAGCAGTACAAGGACA+TGG | + | chr5.1:13553341-13553360 | MS.gene67472:CDS | 50.0% | |
| TTGAGTCTCGATTGGATCGG+CGG | + | chr5.1:13553485-13553504 | MS.gene67472:CDS | 50.0% | |
| ! | ACTTTTGTTGCCCTTGGAGG+TGG | + | chr5.1:13553511-13553530 | MS.gene67472:CDS | 50.0% |
| ! | AGGAAAAGGAAGGGGGGTAT+AGG | - | chr5.1:13555179-13555198 | None:intergenic | 50.0% |
| ! | CACTTTTCATGCTTCGACGG+GGG | - | chr5.1:13555933-13555952 | None:intergenic | 50.0% |
| ! | CCTCTGGTTCGATTCTTGCA+AGG | - | chr5.1:13555872-13555891 | None:intergenic | 50.0% |
| ! | GGAAAAGGAAGGGGGGTATA+GGG | - | chr5.1:13555178-13555197 | None:intergenic | 50.0% |
| ! | TCCAAACAGCTGGCCTATGA+GGG | + | chr5.1:13555210-13555229 | MS.gene67472:intron | 50.0% |
| ! | TGCACTTTTGTTGCCCTTGG+AGG | + | chr5.1:13553508-13553527 | MS.gene67472:CDS | 50.0% |
| ! | TTAACAATGGTGGGGACACC+AGG | - | chr5.1:13552194-13552213 | None:intergenic | 50.0% |
| ! | TTCCAAACAGCTGGCCTATG+AGG | + | chr5.1:13555209-13555228 | MS.gene67472:intron | 50.0% |
| !! | CCACTTTTCATGCTTCGACG+GGG | - | chr5.1:13555934-13555953 | None:intergenic | 50.0% |
| AAGAATCGAACCAGAGGCGG+AGG | + | chr5.1:13555875-13555894 | MS.gene67472:intron | 55.0% | |
| AAGGGTTGGAGGTTGAGCCT+GGG | - | chr5.1:13555478-13555497 | None:intergenic | 55.0% | |
| ACAAGACTGCTTGCGACGGA+GGG | - | chr5.1:13555292-13555311 | None:intergenic | 55.0% | |
| ACATGTCATACCGCCTCGGT+TGG | + | chr5.1:13556578-13556597 | MS.gene67472:CDS | 55.0% | |
| ACCCTCATAGGCCAGCTGTT+TGG | - | chr5.1:13555214-13555233 | None:intergenic | 55.0% | |
| ACCGGATGGTGAGCAGTACA+AGG | + | chr5.1:13553335-13553354 | MS.gene67472:CDS | 55.0% | |
| AGACTTGCCAGAAGGGTTGG+AGG | - | chr5.1:13555489-13555508 | None:intergenic | 55.0% | |
| CAGAGAGGGAACTGGCATCA+GGG | + | chr5.1:13553882-13553901 | MS.gene67472:CDS | 55.0% | |
| CCCCGTCGAAGCATGAAAAG+TGG | + | chr5.1:13555931-13555950 | MS.gene67472:intron | 55.0% | |
| CCCTTCTGGCAAGTCTGTTG+TGG | + | chr5.1:13555493-13555512 | MS.gene67472:intron | 55.0% | |
| CTTTCATGTGGATACGGGCG+TGG | - | chr5.1:13555237-13555256 | None:intergenic | 55.0% | |
| GAGGACAAGACTGCTTGCGA+CGG | - | chr5.1:13555296-13555315 | None:intergenic | 55.0% | |
| GCCAATCACACCACCTCCAA+GGG | - | chr5.1:13553524-13553543 | None:intergenic | 55.0% | |
| GCCACAACAGACTTGCCAGA+AGG | - | chr5.1:13555497-13555516 | None:intergenic | 55.0% | |
| GGTGTGATTGGCGACATGTG+TGG | + | chr5.1:13553532-13553551 | MS.gene67472:CDS | 55.0% | |
| ! | CAGGTTCTTCGGCCCTTTTC+CGG | - | chr5.1:13555630-13555649 | None:intergenic | 55.0% |
| ! | CGCAAGCAGTCTTGTCCTCA+AGG | + | chr5.1:13555297-13555316 | MS.gene67472:intron | 55.0% |
| ! | CGGTGCACTTTTGTTGCCCT+TGG | + | chr5.1:13553505-13553524 | MS.gene67472:CDS | 55.0% |
| !! | GCGACGGAGGGAGTATTGAT+AGG | - | chr5.1:13555280-13555299 | None:intergenic | 55.0% |
| AGAGGCTGTTGCAGCTGGCA+CGG | + | chr5.1:13556455-13556474 | MS.gene67472:CDS | 60.0% | |
| AGGGTTGGAGGTTGAGCCTG+GGG | - | chr5.1:13555477-13555496 | None:intergenic | 60.0% | |
| ATACGGGCGTGGACCCTCAT+AGG | - | chr5.1:13555226-13555245 | None:intergenic | 60.0% | |
| CAAGGCCGAGGTTGTGTCCT+TGG | + | chr5.1:13554575-13554594 | MS.gene67472:CDS | 60.0% | |
| CATGGAGAGGCTGTTGCAGC+TGG | + | chr5.1:13556450-13556469 | MS.gene67472:CDS | 60.0% | |
| CCAGAGAGGGAACTGGCATC+AGG | + | chr5.1:13553881-13553900 | MS.gene67472:CDS | 60.0% | |
| CCTGATGCCAGTTCCCTCTC+TGG | - | chr5.1:13553884-13553903 | None:intergenic | 60.0% | |
| CGCCAATCACACCACCTCCA+AGG | - | chr5.1:13553525-13553544 | None:intergenic | 60.0% | |
| GAAGGGTTGGAGGTTGAGCC+TGG | - | chr5.1:13555479-13555498 | None:intergenic | 60.0% | |
| GACAAGACTGCTTGCGACGG+AGG | - | chr5.1:13555293-13555312 | None:intergenic | 60.0% | |
| GCCCTTGGAGGTGGTGTGAT+TGG | + | chr5.1:13553520-13553539 | MS.gene67472:CDS | 60.0% | |
| GGCTATGGGCAGTGGCTTCA+TGG | + | chr5.1:13556432-13556451 | MS.gene67472:CDS | 60.0% | |
| GGCTCAACCTCCAACCCTTC+TGG | + | chr5.1:13555479-13555498 | MS.gene67472:intron | 60.0% | |
| TCAGGTTCCTCGATGTCCCC+AGG | + | chr5.1:13555458-13555477 | MS.gene67472:intron | 60.0% | |
| TGGGCAGTGGCTTCATGGAG+AGG | + | chr5.1:13556437-13556456 | MS.gene67472:CDS | 60.0% | |
| ! | CAATGGTGGGGACACCAGGT+TGG | - | chr5.1:13552190-13552209 | None:intergenic | 60.0% |
| ! | GCTGCCGCTTCATTCCTACG+TGG | + | chr5.1:13553559-13553578 | MS.gene67472:CDS | 60.0% |
| ! | GTTCTTCGGCCCTTTTCCGG+TGG | - | chr5.1:13555627-13555646 | None:intergenic | 60.0% |
| ! | TTCTCAAGTTGCGCCCGCAC+CGG | - | chr5.1:13555694-13555713 | None:intergenic | 60.0% |
| !! | CTAGCGTTGGCTATGGGCAG+TGG | + | chr5.1:13556424-13556443 | MS.gene67472:CDS | 60.0% |
| !! | CTATGGTTTGCTGCCGGTGC+GGG | + | chr5.1:13555678-13555697 | MS.gene67472:intron | 60.0% |
| !! | GCTATGGTTTGCTGCCGGTG+CGG | + | chr5.1:13555677-13555696 | MS.gene67472:intron | 60.0% |
| !! | TGAGGGTGCCAGAGTTCACC+CGG | - | chr5.1:13555564-13555583 | None:intergenic | 60.0% |
| !! | TGGGGTGATGGGGAGTTGTG+AGG | - | chr5.1:13555088-13555107 | None:intergenic | 60.0% |
| GGGTGAACTCTGGCACCCTC+AGG | + | chr5.1:13555563-13555582 | MS.gene67472:intron | 65.0% | |
| GGTTGAGCCTGGGGACATCG+AGG | - | chr5.1:13555468-13555487 | None:intergenic | 65.0% | |
| TGGGAGGAAACCTCCGCCTC+TGG | - | chr5.1:13555888-13555907 | None:intergenic | 65.0% | |
| ! | CTTCGGCCCTTTTCCGGTGG+TGG | - | chr5.1:13555624-13555643 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 13552164 | 13556927 | 13552164 | ID=MS.gene67472 |
| chr5.1 | mRNA | 13552164 | 13556927 | 13552164 | ID=MS.gene67472.t1;Parent=MS.gene67472 |
| chr5.1 | exon | 13552164 | 13552288 | 13552164 | ID=MS.gene67472.t1.exon1;Parent=MS.gene67472.t1 |
| chr5.1 | CDS | 13552164 | 13552288 | 13552164 | ID=cds.MS.gene67472.t1;Parent=MS.gene67472.t1 |
| chr5.1 | exon | 13553212 | 13553362 | 13553212 | ID=MS.gene67472.t1.exon2;Parent=MS.gene67472.t1 |
| chr5.1 | CDS | 13553212 | 13553362 | 13553212 | ID=cds.MS.gene67472.t1;Parent=MS.gene67472.t1 |
| chr5.1 | exon | 13553454 | 13553621 | 13553454 | ID=MS.gene67472.t1.exon3;Parent=MS.gene67472.t1 |
| chr5.1 | CDS | 13553454 | 13553621 | 13553454 | ID=cds.MS.gene67472.t1;Parent=MS.gene67472.t1 |
| chr5.1 | exon | 13553764 | 13553990 | 13553764 | ID=MS.gene67472.t1.exon4;Parent=MS.gene67472.t1 |
| chr5.1 | CDS | 13553764 | 13553990 | 13553764 | ID=cds.MS.gene67472.t1;Parent=MS.gene67472.t1 |
| chr5.1 | exon | 13554530 | 13554653 | 13554530 | ID=MS.gene67472.t1.exon5;Parent=MS.gene67472.t1 |
| chr5.1 | CDS | 13554530 | 13554653 | 13554530 | ID=cds.MS.gene67472.t1;Parent=MS.gene67472.t1 |
| chr5.1 | exon | 13556414 | 13556476 | 13556414 | ID=MS.gene67472.t1.exon6;Parent=MS.gene67472.t1 |
| chr5.1 | CDS | 13556414 | 13556476 | 13556414 | ID=cds.MS.gene67472.t1;Parent=MS.gene67472.t1 |
| chr5.1 | exon | 13556565 | 13556708 | 13556565 | ID=MS.gene67472.t1.exon7;Parent=MS.gene67472.t1 |
| chr5.1 | CDS | 13556565 | 13556708 | 13556565 | ID=cds.MS.gene67472.t1;Parent=MS.gene67472.t1 |
| chr5.1 | exon | 13556796 | 13556927 | 13556796 | ID=MS.gene67472.t1.exon8;Parent=MS.gene67472.t1 |
| chr5.1 | CDS | 13556796 | 13556927 | 13556796 | ID=cds.MS.gene67472.t1;Parent=MS.gene67472.t1 |
| Gene Sequence |
| Protein sequence |
