Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67707.t1 | XP_003612212.1 | 98.7 | 377 | 5 | 0 | 1 | 377 | 67 | 443 | 2.10E-212 | 748 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67707.t1 | U3KRF2 | 86.5 | 377 | 51 | 0 | 1 | 377 | 69 | 445 | 3.2e-190 | 665.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67707.t1 | G7JXJ9 | 98.7 | 377 | 5 | 0 | 1 | 377 | 67 | 443 | 1.5e-212 | 748.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene013566 | MS.gene67707 | PPI |
| MS.gene06894 | MS.gene67707 | PPI |
| MS.gene06683 | MS.gene67707 | PPI |
| MS.gene67707 | MS.gene057128 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67707.t1 | MTR_5g022580 | 98.674 | 377 | 5 | 0 | 1 | 377 | 67 | 443 | 0.0 | 770 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67707.t1 | AT5G66120 | 85.205 | 365 | 54 | 0 | 13 | 377 | 78 | 442 | 0.0 | 659 |
| MS.gene67707.t1 | AT5G66120 | 86.012 | 336 | 47 | 0 | 42 | 377 | 3 | 338 | 0.0 | 609 |
Find 105 sgRNAs with CRISPR-Local
Find 387 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAACCCTGATCCGATATAAA+TGG | 0.217921 | 5.1:-13575972 | None:intergenic |
| TTTGCAGAAGTTATAAAGTA+TGG | 0.237109 | 5.1:+13577637 | MS.gene67707:CDS |
| AGTCAGGGCTACATTGAATT+TGG | 0.243315 | 5.1:+13578346 | MS.gene67707:CDS |
| CACCATTGTTAACGTTGATT+TGG | 0.244416 | 5.1:+13575934 | MS.gene67707:CDS |
| TTATAAAGTATGGGCTCATT+AGG | 0.291558 | 5.1:+13577647 | MS.gene67707:CDS |
| TTGAGACTTATCCTTCTAAA+AGG | 0.299398 | 5.1:+13580555 | MS.gene67707:CDS |
| TTGAATTTGGGTCATACATT+TGG | 0.323104 | 5.1:+13578359 | MS.gene67707:CDS |
| ATAGCATATGCCAGTGCATT+AGG | 0.327626 | 5.1:-13578266 | None:intergenic |
| TCTTCAGTTGGTGGCAAAAC+TGG | 0.330298 | 5.1:+13577502 | MS.gene67707:CDS |
| ACACTCTCAACAGAAACATT+TGG | 0.341474 | 5.1:-13577038 | None:intergenic |
| CACTCTCAACAGAAACATTT+GGG | 0.343857 | 5.1:-13577037 | None:intergenic |
| ACCATTGTTAACGTTGATTT+GGG | 0.350396 | 5.1:+13575935 | MS.gene67707:CDS |
| ATGTCCACAGTCATCATTTC+AGG | 0.366546 | 5.1:-13580399 | None:intergenic |
| TCAGATTCCAACCACTGTTA+TGG | 0.372653 | 5.1:+13577326 | MS.gene67707:CDS |
| ATGAGAGAGAAGGTGGAGTC+AGG | 0.374462 | 5.1:+13578330 | MS.gene67707:CDS |
| TTAACGTTGATTTGGGTAAT+CGG | 0.380324 | 5.1:+13575942 | MS.gene67707:CDS |
| CAAGGCCGAGGTTGTGTCCT+TGG | 0.381716 | 5.1:+13578307 | MS.gene67707:CDS |
| GCCCTTGGAGGTGGTGTGAT+TGG | 0.385690 | 5.1:+13577252 | MS.gene67707:CDS |
| TATCCCATTTATATCGGATC+AGG | 0.386598 | 5.1:+13575968 | MS.gene67707:CDS |
| CATGGAGAGGCTGTTGCAGC+TGG | 0.391153 | 5.1:+13580182 | MS.gene67707:CDS |
| ATCATTTCAGGAGGCACAAT+TGG | 0.396114 | 5.1:-13580387 | None:intergenic |
| CCAGAGAGGGAACTGGCATC+AGG | 0.397934 | 5.1:+13577613 | MS.gene67707:CDS |
| GTCAGGGCTACATTGAATTT+GGG | 0.399767 | 5.1:+13578347 | MS.gene67707:CDS |
| CGGAGCTATCCCATTTATAT+CGG | 0.402539 | 5.1:+13575962 | MS.gene67707:CDS |
| GGCTATGGGCAGTGGCTTCA+TGG | 0.408977 | 5.1:+13580164 | MS.gene67707:CDS |
| CCGTAGTGTTAGTGACAATA+AGG | 0.430212 | 5.1:-13576965 | None:intergenic |
| CCCCTTGGGAAGAACTTGAT+TGG | 0.431232 | 5.1:+13577535 | MS.gene67707:CDS |
| AATTACCTTTGAAGAAGTTC+AGG | 0.444038 | 5.1:-13576004 | None:intergenic |
| CCTGATGCCAGTTCCCTCTC+TGG | 0.447867 | 5.1:-13577613 | None:intergenic |
| TATAAAGTATGGGCTCATTA+GGG | 0.460868 | 5.1:+13577648 | MS.gene67707:CDS |
| AACCCTGATCCGATATAAAT+GGG | 0.471338 | 5.1:-13575971 | None:intergenic |
| ATAGAAACTAGCGTTGGCTA+TGG | 0.484418 | 5.1:+13580149 | MS.gene67707:CDS |
| TCCTTGTACTGCTCACCATC+CGG | 0.486431 | 5.1:-13577068 | None:intergenic |
| TGAGAGAGAAGGTGGAGTCA+GGG | 0.489001 | 5.1:+13578331 | MS.gene67707:CDS |
| GGTATATCAGGTTGATAAGA+AGG | 0.492255 | 5.1:+13580518 | MS.gene67707:intron |
| TAGGTTGATTCTTCAGTTGG+TGG | 0.498341 | 5.1:+13577493 | MS.gene67707:intron |
| CAAGGCCATTGAGTCTCGAT+TGG | 0.499244 | 5.1:+13577209 | MS.gene67707:CDS |
| GTTGTTGATGCTTTAACAAG+TGG | 0.499540 | 5.1:+13577011 | MS.gene67707:CDS |
| AAATCAACGTTAACAATGGT+GGG | 0.500362 | 5.1:-13575932 | None:intergenic |
| CAATAAGGACCTTCTTTCCA+TGG | 0.505079 | 5.1:-13576950 | None:intergenic |
| CTAGCGTTGGCTATGGGCAG+TGG | 0.507771 | 5.1:+13580156 | MS.gene67707:CDS |
| ATATGCAGGCATTAATGGCC+AGG | 0.511276 | 5.1:+13577701 | MS.gene67707:CDS |
| TTGTAGGTTGATTCTTCAGT+TGG | 0.512666 | 5.1:+13577490 | MS.gene67707:intron |
| CCGATCCAATCGAGACTCAA+TGG | 0.515263 | 5.1:-13577214 | None:intergenic |
| ATCCTTCTAAAAGGTTCTCT+AGG | 0.515459 | 5.1:+13580564 | MS.gene67707:CDS |
| TTGCAGAAGTTATAAAGTAT+GGG | 0.520923 | 5.1:+13577638 | MS.gene67707:CDS |
| CTGGTATAAACCATCCCCTT+GGG | 0.525333 | 5.1:+13577521 | MS.gene67707:CDS |
| TACATTACCAGAGAGGGAAC+TGG | 0.528745 | 5.1:+13577606 | MS.gene67707:CDS |
| TTAACAATGGTGGGGACACC+AGG | 0.531488 | 5.1:-13575923 | None:intergenic |
| ACCTGTGCCATAACAGTGGT+TGG | 0.531757 | 5.1:-13577333 | None:intergenic |
| ACCGGATGGTGAGCAGTACA+AGG | 0.533496 | 5.1:+13577067 | MS.gene67707:CDS |
| CAAATCAACGTTAACAATGG+TGG | 0.540010 | 5.1:-13575933 | None:intergenic |
| ACATGTCATACCGCCTCGGT+TGG | 0.540345 | 5.1:+13580310 | MS.gene67707:CDS |
| TCAAGTTCTTCCCAAGGGGA+TGG | 0.545666 | 5.1:-13577531 | None:intergenic |
| CGCCAATCACACCACCTCCA+AGG | 0.548112 | 5.1:-13577254 | None:intergenic |
| TAGGCATGTCCATGGAAAGA+AGG | 0.549371 | 5.1:+13576941 | MS.gene67707:intron |
| TAGAAACTAGCGTTGGCTAT+GGG | 0.550835 | 5.1:+13580150 | MS.gene67707:CDS |
| TGGGCAGTGGCTTCATGGAG+AGG | 0.553068 | 5.1:+13580169 | MS.gene67707:CDS |
| TATAATAATAGGCATGTCCA+TGG | 0.555537 | 5.1:+13576933 | MS.gene67707:intron |
| CACGGGAGAATATGACAGAA+AGG | 0.557955 | 5.1:+13580599 | MS.gene67707:CDS |
| TTGCAGAGATCCTAATGCAC+TGG | 0.562804 | 5.1:+13578256 | MS.gene67707:intron |
| ACTGGTATAAACCATCCCCT+TGG | 0.563182 | 5.1:+13577520 | MS.gene67707:CDS |
| ATAAACCTGAACTTCTTCAA+AGG | 0.564077 | 5.1:+13575999 | MS.gene67707:CDS |
| TCCAACCACTGTTATGGCAC+AGG | 0.567423 | 5.1:+13577332 | MS.gene67707:CDS |
| CAATGGTGGGGACACCAGGT+TGG | 0.572157 | 5.1:-13575919 | None:intergenic |
| ACCAATCAAGTTCTTCCCAA+GGG | 0.573622 | 5.1:-13577536 | None:intergenic |
| CACCAATCAAGTTCTTCCCA+AGG | 0.573892 | 5.1:-13577537 | None:intergenic |
| CAGAGAGGGAACTGGCATCA+GGG | 0.581095 | 5.1:+13577614 | MS.gene67707:CDS |
| GCCAATCACACCACCTCCAA+GGG | 0.583987 | 5.1:-13577253 | None:intergenic |
| ATCCCATTTATATCGGATCA+GGG | 0.585337 | 5.1:+13575969 | MS.gene67707:CDS |
| CTATAAGCACACATTGAGGT+TGG | 0.590057 | 5.1:-13577567 | None:intergenic |
| CCTTATTGTCACTAACACTA+CGG | 0.592911 | 5.1:+13576965 | MS.gene67707:CDS |
| GTTGATAAGAAGGTAGCAGA+TGG | 0.593067 | 5.1:+13580528 | MS.gene67707:CDS |
| TGCACCTTTGTATCTAGACA+AGG | 0.596590 | 5.1:+13576989 | MS.gene67707:CDS |
| GTTGACATGTCATACCGCCT+CGG | 0.604970 | 5.1:+13580306 | MS.gene67707:CDS |
| AGAGGCTGTTGCAGCTGGCA+CGG | 0.606315 | 5.1:+13580187 | MS.gene67707:CDS |
| TCCACCTTCTCTCTCATCCA+AGG | 0.607242 | 5.1:-13578324 | None:intergenic |
| ATTAGATACATTACCAGAGA+GGG | 0.613639 | 5.1:+13577600 | MS.gene67707:CDS |
| ATCATGTGAAAACAAGGCCG+AGG | 0.615090 | 5.1:+13578295 | MS.gene67707:CDS |
| TTGAGTCTCGATTGGATCGG+CGG | 0.622236 | 5.1:+13577217 | MS.gene67707:CDS |
| ACCCAAATCAACGTTAACAA+TGG | 0.628458 | 5.1:-13575936 | None:intergenic |
| CTCATCCAAGGACACAACCT+CGG | 0.631144 | 5.1:-13578312 | None:intergenic |
| ACAACCTTGTCTAGATACAA+AGG | 0.633531 | 5.1:-13576993 | None:intergenic |
| AATCAACGTTAACAATGGTG+GGG | 0.636830 | 5.1:-13575931 | None:intergenic |
| GGACATGTTTAAATCTGTCA+TGG | 0.638172 | 5.1:+13580416 | MS.gene67707:CDS |
| TAGGCAATAGAAACTAGCGT+TGG | 0.642948 | 5.1:+13580143 | MS.gene67707:intron |
| AAAGCGATCATGTGAAAACA+AGG | 0.643424 | 5.1:+13578289 | MS.gene67707:CDS |
| TCCTTGGATGAGAGAGAAGG+TGG | 0.653001 | 5.1:+13578323 | MS.gene67707:CDS |
| AACACCACGTAGGAATGAAG+CGG | 0.653409 | 5.1:-13577295 | None:intergenic |
| TGGTGAGCAGTACAAGGACA+TGG | 0.659373 | 5.1:+13577073 | MS.gene67707:CDS |
| TCCACAGTCATCATTTCAGG+AGG | 0.661026 | 5.1:-13580396 | None:intergenic |
| CCATTGAGTCTCGATTGGAT+CGG | 0.669888 | 5.1:+13577214 | MS.gene67707:CDS |
| GGTGTGATTGGCGACATGTG+TGG | 0.672916 | 5.1:+13577264 | MS.gene67707:CDS |
| GTGTCCTTGGATGAGAGAGA+AGG | 0.674887 | 5.1:+13578320 | MS.gene67707:CDS |
| CCAATCAAGTTCTTCCCAAG+GGG | 0.683553 | 5.1:-13577535 | None:intergenic |
| TAAGACCTGTGCCATAACAG+TGG | 0.688059 | 5.1:-13577337 | None:intergenic |
| GTGTCTATAAGCACACATTG+AGG | 0.695429 | 5.1:-13577571 | None:intergenic |
| TCTTATGAAAGTGTTTGACA+AGG | 0.696371 | 5.1:+13577191 | MS.gene67707:CDS |
| GCCTCCTGAAATGATGACTG+TGG | 0.699500 | 5.1:+13580395 | MS.gene67707:CDS |
| CATTAGATACATTACCAGAG+AGG | 0.702812 | 5.1:+13577599 | MS.gene67707:CDS |
| GAATAAAATTAACACCACGT+AGG | 0.705762 | 5.1:-13577305 | None:intergenic |
| TAGAATCATCAATCCAACCG+AGG | 0.718923 | 5.1:-13580323 | None:intergenic |
| CATGTTTAAATCTGTCATGG+CGG | 0.724496 | 5.1:+13580419 | MS.gene67707:CDS |
| GCTGCCGCTTCATTCCTACG+TGG | 0.729031 | 5.1:+13577291 | MS.gene67707:CDS |
| AATCATCAATCCAACCGAGG+CGG | 0.730486 | 5.1:-13580320 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTAAATTTATAGACAAA+TGG | + | chr5.1:13576410-13576429 | MS.gene67707:intron | 10.0% |
| !! | TATTTCATGTTTATAATAAT+AGG | + | chr5.1:13576922-13576941 | MS.gene67707:intron | 10.0% |
| !! | TCAATTTAATAAATATTAGA+TGG | + | chr5.1:13578559-13578578 | MS.gene67707:intron | 10.0% |
| !! | TTAAAAGAAAATTAAAATAG+GGG | + | chr5.1:13577947-13577966 | MS.gene67707:intron | 10.0% |
| !! | TTACTGTTTATTATATTATT+TGG | + | chr5.1:13578396-13578415 | MS.gene67707:intron | 10.0% |
| !!! | TTTTAAAAACATATATAAGT+AGG | - | chr5.1:13579979-13579998 | None:intergenic | 10.0% |
| !! | AATACAAAATTCAATGAATA+TGG | - | chr5.1:13577466-13577485 | None:intergenic | 15.0% |
| !!! | GATATTATTGAAGATATTTT+AGG | + | chr5.1:13576203-13576222 | MS.gene67707:intron | 15.0% |
| !!! | TTTTTTTTTTTTTGAAGTTG+TGG | + | chr5.1:13576658-13576677 | MS.gene67707:intron | 15.0% |
| !! | AAACTATGATGATTATGAAA+AGG | - | chr5.1:13576637-13576656 | None:intergenic | 20.0% |
| !! | AAATATGTAACATGATGATT+AGG | + | chr5.1:13576683-13576702 | MS.gene67707:intron | 20.0% |
| !! | AAATTCAATGAATATGGAAA+AGG | - | chr5.1:13577460-13577479 | None:intergenic | 20.0% |
| !! | AATATGTAACATGATGATTA+GGG | + | chr5.1:13576684-13576703 | MS.gene67707:intron | 20.0% |
| !! | AATTCAATGAATATGGAAAA+GGG | - | chr5.1:13577459-13577478 | None:intergenic | 20.0% |
| !! | ATAGTCAATTTAATCAAACA+TGG | + | chr5.1:13578614-13578633 | MS.gene67707:intron | 20.0% |
| !! | ATCACATTAATTAAGAAAGT+TGG | + | chr5.1:13576382-13576401 | MS.gene67707:intron | 20.0% |
| !! | GACTAAAAGTTCATTTATAT+TGG | + | chr5.1:13580497-13580516 | MS.gene67707:intron | 20.0% |
| !! | TAATACTAATCATCAAACAT+AGG | - | chr5.1:13576083-13576102 | None:intergenic | 20.0% |
| !! | TATCTTCAATAATATCTACA+TGG | - | chr5.1:13576199-13576218 | None:intergenic | 20.0% |
| !! | TTCATTTATATTGGTATATC+AGG | + | chr5.1:13580506-13580525 | MS.gene67707:intron | 20.0% |
| !!! | AAATCTATCTTTTGAAAAAG+GGG | - | chr5.1:13579458-13579477 | None:intergenic | 20.0% |
| !!! | ACGTTCTCAATTTTTAATTA+AGG | + | chr5.1:13576130-13576149 | MS.gene67707:intron | 20.0% |
| !!! | AGAAATCTATCTTTTGAAAA+AGG | - | chr5.1:13579460-13579479 | None:intergenic | 20.0% |
| !!! | ATTTTCCTTATTCTAACATT+TGG | - | chr5.1:13579856-13579875 | None:intergenic | 20.0% |
| !!! | GAAATCTATCTTTTGAAAAA+GGG | - | chr5.1:13579459-13579478 | None:intergenic | 20.0% |
| !!! | GAATTTTGTATTATGTTTGT+AGG | + | chr5.1:13577474-13577493 | MS.gene67707:intron | 20.0% |
| !!! | GATTTAAGTTGTATACTTTT+AGG | + | chr5.1:13576152-13576171 | MS.gene67707:intron | 20.0% |
| !!! | GTAAAAGCAATTTTATTGAT+GGG | + | chr5.1:13578666-13578685 | MS.gene67707:intron | 20.0% |
| !!! | TCTTTATTTTGTGTTTGAAT+TGG | + | chr5.1:13577100-13577119 | MS.gene67707:intron | 20.0% |
| !!! | TGTAAAAGCAATTTTATTGA+TGG | + | chr5.1:13578665-13578684 | MS.gene67707:intron | 20.0% |
| !!! | TTCCAACTTTTACAAATTAT+CGG | + | chr5.1:13578227-13578246 | MS.gene67707:intron | 20.0% |
| ! | AAAGACAATATAACACGAAA+TGG | - | chr5.1:13579936-13579955 | None:intergenic | 25.0% |
| ! | AAGACAATATAACACGAAAT+GGG | - | chr5.1:13579935-13579954 | None:intergenic | 25.0% |
| ! | AGATAGACAAACAAGAAATA+CGG | - | chr5.1:13578159-13578178 | None:intergenic | 25.0% |
| ! | ATATGTAACATGATGATTAG+GGG | + | chr5.1:13576685-13576704 | MS.gene67707:intron | 25.0% |
| ! | CAAACAAGGTTCTATATTTA+GGG | - | chr5.1:13576357-13576376 | None:intergenic | 25.0% |
| ! | GCTCATTGAAATCATAAAAT+CGG | + | chr5.1:13579792-13579811 | MS.gene67707:intron | 25.0% |
| ! | GTATGAAATATTTATAACCC+AGG | + | chr5.1:13578461-13578480 | MS.gene67707:intron | 25.0% |
| ! | GTATTATACAATTTACGTAG+TGG | + | chr5.1:13576814-13576833 | MS.gene67707:intron | 25.0% |
| ! | TAATGTGATTTAGTCAAACA+AGG | - | chr5.1:13576371-13576390 | None:intergenic | 25.0% |
| ! | TACACTGTTACATATTACTT+GGG | + | chr5.1:13577796-13577815 | MS.gene67707:intron | 25.0% |
| ! | TAGTTTCTATTGCCTAAAAA+AGG | - | chr5.1:13580139-13580158 | None:intergenic | 25.0% |
| ! | TCAAACAAGGTTCTATATTT+AGG | - | chr5.1:13576358-13576377 | None:intergenic | 25.0% |
| ! | TTACACTGTTACATATTACT+TGG | + | chr5.1:13577795-13577814 | MS.gene67707:intron | 25.0% |
| ! | TTCATACATCAAGAAAGAAA+AGG | - | chr5.1:13578448-13578467 | None:intergenic | 25.0% |
| ! | TTGCAGAAGTTATAAAGTAT+GGG | + | chr5.1:13577638-13577657 | MS.gene67707:CDS | 25.0% |
| ! | TTTGCAGAAGTTATAAAGTA+TGG | + | chr5.1:13577637-13577656 | MS.gene67707:CDS | 25.0% |
| ! | TTTGTGTTTATTTACACTCT+TGG | + | chr5.1:13577126-13577145 | MS.gene67707:intron | 25.0% |
| !! | AATTTTATGTCAATGTTCAC+AGG | + | chr5.1:13580275-13580294 | MS.gene67707:intron | 25.0% |
| !! | AGAGTAATAGAGCATTATAA+AGG | - | chr5.1:13578208-13578227 | None:intergenic | 25.0% |
| !! | ATTTATCTTTTATCTCTGGT+AGG | - | chr5.1:13578761-13578780 | None:intergenic | 25.0% |
| !! | TACGAAAATGGTATAGTTTT+AGG | - | chr5.1:13578106-13578125 | None:intergenic | 25.0% |
| !!! | AGTTAGTGACATTTTAAAAC+AGG | + | chr5.1:13580356-13580375 | MS.gene67707:CDS | 25.0% |
| !!! | CTTTTAAAAAACTGTAGTAG+TGG | - | chr5.1:13577934-13577953 | None:intergenic | 25.0% |
| !!! | GATTTTAATGTTCTTTCTCA+TGG | + | chr5.1:13580111-13580130 | MS.gene67707:intron | 25.0% |
| !!! | TAACAAGTTTTCAAGAGAAT+TGG | + | chr5.1:13576440-13576459 | MS.gene67707:intron | 25.0% |
| !!! | TACATTTGTTTCTATTCTGA+GGG | + | chr5.1:13580251-13580270 | MS.gene67707:intron | 25.0% |
| !!! | TTACATTTGTTTCTATTCTG+AGG | + | chr5.1:13580250-13580269 | MS.gene67707:intron | 25.0% |
| AAACAGTAAAACTACTCACA+TGG | - | chr5.1:13578385-13578404 | None:intergenic | 30.0% | |
| AAATCAACGTTAACAATGGT+GGG | - | chr5.1:13575935-13575954 | None:intergenic | 30.0% | |
| AGAAGGATAAATCAGAAGTT+AGG | - | chr5.1:13579388-13579407 | None:intergenic | 30.0% | |
| AGAATTAGTTACAATTGGTG+AGG | - | chr5.1:13578886-13578905 | None:intergenic | 30.0% | |
| AGACAATATAACACGAAATG+GGG | - | chr5.1:13579934-13579953 | None:intergenic | 30.0% | |
| AGACATACAAATGTATAACC+TGG | - | chr5.1:13578482-13578501 | None:intergenic | 30.0% | |
| AGGGAAGAATTAGTTACAAT+TGG | - | chr5.1:13578891-13578910 | None:intergenic | 30.0% | |
| AGTAGGACACTATACAATTA+GGG | - | chr5.1:13576853-13576872 | None:intergenic | 30.0% | |
| ATAAACCTGAACTTCTTCAA+AGG | + | chr5.1:13575999-13576018 | MS.gene67707:CDS | 30.0% | |
| ATAAGTAGGCTGAGAAATTA+TGG | - | chr5.1:13579965-13579984 | None:intergenic | 30.0% | |
| ATGCTCCAAATGTTAGAATA+AGG | + | chr5.1:13579848-13579867 | MS.gene67707:intron | 30.0% | |
| ATGGTCAGCATATTAAACAA+TGG | - | chr5.1:13579138-13579157 | None:intergenic | 30.0% | |
| ATGTACAGATACTACGAAAA+TGG | - | chr5.1:13578118-13578137 | None:intergenic | 30.0% | |
| ATTAGATACATTACCAGAGA+GGG | + | chr5.1:13577600-13577619 | MS.gene67707:CDS | 30.0% | |
| CATGTAATGTGAAGTCAAAA+AGG | - | chr5.1:13577860-13577879 | None:intergenic | 30.0% | |
| CCAAGAAAAGGAATAACAAA+GGG | + | chr5.1:13578714-13578733 | MS.gene67707:intron | 30.0% | |
| CCATATATCTCAGCTTAAAA+AGG | - | chr5.1:13579269-13579288 | None:intergenic | 30.0% | |
| GAAAAATATGCAGGCATTAA+TGG | + | chr5.1:13577696-13577715 | MS.gene67707:CDS | 30.0% | |
| GAAGGATAAATCAGAAGTTA+GGG | - | chr5.1:13579387-13579406 | None:intergenic | 30.0% | |
| GAATAAAATTAACACCACGT+AGG | - | chr5.1:13577308-13577327 | None:intergenic | 30.0% | |
| GACATACAAATGTATAACCT+GGG | - | chr5.1:13578481-13578500 | None:intergenic | 30.0% | |
| GCTTAAACAACATTCATTGA+AGG | - | chr5.1:13579521-13579540 | None:intergenic | 30.0% | |
| TAAGTAGGCTGAGAAATTAT+GGG | - | chr5.1:13579964-13579983 | None:intergenic | 30.0% | |
| TATAAAGTATGGGCTCATTA+GGG | + | chr5.1:13577648-13577667 | MS.gene67707:CDS | 30.0% | |
| TATAAATTACAACTGCCTGA+GGG | - | chr5.1:13579313-13579332 | None:intergenic | 30.0% | |
| TATAATAATAGGCATGTCCA+TGG | + | chr5.1:13576933-13576952 | MS.gene67707:intron | 30.0% | |
| TCAGCATATTAAACAATGGA+TGG | - | chr5.1:13579134-13579153 | None:intergenic | 30.0% | |
| TCTACATGGTGCAATTTAAT+TGG | - | chr5.1:13576185-13576204 | None:intergenic | 30.0% | |
| TTATAAAGTATGGGCTCATT+AGG | + | chr5.1:13577647-13577666 | MS.gene67707:CDS | 30.0% | |
| TTGAATTTGGGTCATACATT+TGG | + | chr5.1:13578359-13578378 | MS.gene67707:CDS | 30.0% | |
| TTGAGACTTATCCTTCTAAA+AGG | + | chr5.1:13580555-13580574 | MS.gene67707:CDS | 30.0% | |
| ! | AAATTGCTACTTAAAGCGAA+AGG | - | chr5.1:13576614-13576633 | None:intergenic | 30.0% |
| ! | AAGATAGATTTCTCCTTTTC+CGG | + | chr5.1:13579467-13579486 | MS.gene67707:intron | 30.0% |
| ! | AATTACCTTTGAAGAAGTTC+AGG | - | chr5.1:13576007-13576026 | None:intergenic | 30.0% |
| ! | ACTCAAAGTAAGATTTTACC+TGG | - | chr5.1:13577722-13577741 | None:intergenic | 30.0% |
| ! | ATCATAAAATCGGCGATTTT+TGG | + | chr5.1:13579802-13579821 | MS.gene67707:intron | 30.0% |
| ! | GGAGATTTATCTTTTATCTC+TGG | - | chr5.1:13578765-13578784 | None:intergenic | 30.0% |
| ! | GTGAGGATTATTCATGTTTT+GGG | - | chr5.1:13578803-13578822 | None:intergenic | 30.0% |
| ! | TAGAGCATTATAAAGGCAAT+TGG | - | chr5.1:13578201-13578220 | None:intergenic | 30.0% |
| ! | TCTAGGAAATTGTGTTTTCA+CGG | + | chr5.1:13580581-13580600 | MS.gene67707:CDS | 30.0% |
| ! | TGCCGATAATTTGTAAAAGT+TGG | - | chr5.1:13578232-13578251 | None:intergenic | 30.0% |
| ! | TGTGAGGATTATTCATGTTT+TGG | - | chr5.1:13578804-13578823 | None:intergenic | 30.0% |
| ! | TTACTTGGGAAATGTACTTT+TGG | + | chr5.1:13577810-13577829 | MS.gene67707:intron | 30.0% |
| !! | ACCATTGTTAACGTTGATTT+GGG | + | chr5.1:13575935-13575954 | MS.gene67707:CDS | 30.0% |
| !! | ATCTTTTGAAAAAGGGGAAT+GGG | - | chr5.1:13579452-13579471 | None:intergenic | 30.0% |
| !! | CCTTTTTAAGCTGAGATATA+TGG | + | chr5.1:13579266-13579285 | MS.gene67707:intron | 30.0% |
| !! | GCGATTTTTGGATTTACATT+GGG | + | chr5.1:13579814-13579833 | MS.gene67707:intron | 30.0% |
| !! | TATCTTTTGAAAAAGGGGAA+TGG | - | chr5.1:13579453-13579472 | None:intergenic | 30.0% |
| !! | TCTTATGAAAGTGTTTGACA+AGG | + | chr5.1:13577191-13577210 | MS.gene67707:CDS | 30.0% |
| !! | TGTTGAGAGTGTAATTTTAC+CGG | + | chr5.1:13577049-13577068 | MS.gene67707:CDS | 30.0% |
| !! | TTAACGTTGATTTGGGTAAT+CGG | + | chr5.1:13575942-13575961 | MS.gene67707:CDS | 30.0% |
| !!! | ACACCTTTTGAAACTGTTTA+TGG | - | chr5.1:13579640-13579659 | None:intergenic | 30.0% |
| !!! | CACCTTTTGAAACTGTTTAT+GGG | - | chr5.1:13579639-13579658 | None:intergenic | 30.0% |
| !!! | CCTTTGTTATTCCTTTTCTT+GGG | - | chr5.1:13578716-13578735 | None:intergenic | 30.0% |
| !!! | CTTTGTTATTCCTTTTCTTG+GGG | - | chr5.1:13578715-13578734 | None:intergenic | 30.0% |
| AAAGCGATCATGTGAAAACA+AGG | + | chr5.1:13578289-13578308 | MS.gene67707:CDS | 35.0% | |
| AACCCTGATCCGATATAAAT+GGG | - | chr5.1:13575974-13575993 | None:intergenic | 35.0% | |
| AAGTAGGCTGAGAAATTATG+GGG | - | chr5.1:13579963-13579982 | None:intergenic | 35.0% | |
| AATCAACGTTAACAATGGTG+GGG | - | chr5.1:13575934-13575953 | None:intergenic | 35.0% | |
| ACAACCTTGTCTAGATACAA+AGG | - | chr5.1:13576996-13577015 | None:intergenic | 35.0% | |
| ACACTCTCAACAGAAACATT+TGG | - | chr5.1:13577041-13577060 | None:intergenic | 35.0% | |
| ACATGGAAGAAGCTAGTAAT+AGG | - | chr5.1:13577772-13577791 | None:intergenic | 35.0% | |
| ACCCAAATCAACGTTAACAA+TGG | - | chr5.1:13575939-13575958 | None:intergenic | 35.0% | |
| AGACGAGAAAAAATCTCAAG+AGG | + | chr5.1:13576767-13576786 | MS.gene67707:intron | 35.0% | |
| AGCTGAGATATATGGAAAAC+CGG | + | chr5.1:13579274-13579293 | MS.gene67707:intron | 35.0% | |
| ATACAATTAGGGATGGCAAA+AGG | - | chr5.1:13576842-13576861 | None:intergenic | 35.0% | |
| ATCATGAGGTAGTTTCTTGT+GGG | + | chr5.1:13576542-13576561 | MS.gene67707:intron | 35.0% | |
| ATCCCATTTATATCGGATCA+GGG | + | chr5.1:13575969-13575988 | MS.gene67707:CDS | 35.0% | |
| ATGTAACAGTGTAACAGACA+TGG | - | chr5.1:13577789-13577808 | None:intergenic | 35.0% | |
| ATGTCAATGTTCACAGGTAA+TGG | + | chr5.1:13580281-13580300 | MS.gene67707:intron | 35.0% | |
| ATTAGTTACAATTGGTGAGG+TGG | - | chr5.1:13578883-13578902 | None:intergenic | 35.0% | |
| ATTCTATGCACAATCTGGAT+CGG | + | chr5.1:13579765-13579784 | MS.gene67707:intron | 35.0% | |
| CAAATCAACGTTAACAATGG+TGG | - | chr5.1:13575936-13575955 | None:intergenic | 35.0% | |
| CAAGGTTCTATATTTAGGGA+TGG | - | chr5.1:13576353-13576372 | None:intergenic | 35.0% | |
| CACTCTCAACAGAAACATTT+GGG | - | chr5.1:13577040-13577059 | None:intergenic | 35.0% | |
| CATGTTTAAATCTGTCATGG+CGG | + | chr5.1:13580419-13580438 | MS.gene67707:CDS | 35.0% | |
| CATTAGATACATTACCAGAG+AGG | + | chr5.1:13577599-13577618 | MS.gene67707:CDS | 35.0% | |
| CATTGTAATGCCACTCTTAT+AGG | - | chr5.1:13576235-13576254 | None:intergenic | 35.0% | |
| CCCAAGAAAAGGAATAACAA+AGG | + | chr5.1:13578713-13578732 | MS.gene67707:intron | 35.0% | |
| CCTTATTGTCACTAACACTA+CGG | + | chr5.1:13576965-13576984 | MS.gene67707:CDS | 35.0% | |
| CTCAGCTTAAAAAGGCTATA+GGG | - | chr5.1:13579261-13579280 | None:intergenic | 35.0% | |
| CTCCCATAAACAGTTTCAAA+AGG | + | chr5.1:13579634-13579653 | MS.gene67707:intron | 35.0% | |
| CTGATTTATCCTTCTTGCTA+TGG | + | chr5.1:13579393-13579412 | MS.gene67707:intron | 35.0% | |
| GAGTAGGACACTATACAATT+AGG | - | chr5.1:13576854-13576873 | None:intergenic | 35.0% | |
| GGACATGTTTAAATCTGTCA+TGG | + | chr5.1:13580416-13580435 | MS.gene67707:CDS | 35.0% | |
| GTAAAAAAGCTTTACACCGA+CGG | + | chr5.1:13576275-13576294 | MS.gene67707:intron | 35.0% | |
| GTATAAATTACAACTGCCTG+AGG | - | chr5.1:13579314-13579333 | None:intergenic | 35.0% | |
| GTGCATGTTTGTAATTGAGT+AGG | - | chr5.1:13576870-13576889 | None:intergenic | 35.0% | |
| GTTGTTGATGCTTTAACAAG+TGG | + | chr5.1:13577011-13577030 | MS.gene67707:CDS | 35.0% | |
| TATCCCATTTATATCGGATC+AGG | + | chr5.1:13575968-13575987 | MS.gene67707:CDS | 35.0% | |
| TCAAGAGGCTCAGATATTTA+GGG | + | chr5.1:13576782-13576801 | MS.gene67707:intron | 35.0% | |
| TCTCAGCTTAAAAAGGCTAT+AGG | - | chr5.1:13579262-13579281 | None:intergenic | 35.0% | |
| TGTGTTTCGTGAACTATTCA+TGG | - | chr5.1:13576481-13576500 | None:intergenic | 35.0% | |
| TTAAACAATGGATGGTGAAG+TGG | - | chr5.1:13579126-13579145 | None:intergenic | 35.0% | |
| ! | ATCCTTCTAAAAGGTTCTCT+AGG | + | chr5.1:13580564-13580583 | MS.gene67707:CDS | 35.0% |
| ! | ATGTTGTTTAAGCTGTCTCA+AGG | + | chr5.1:13579528-13579547 | MS.gene67707:intron | 35.0% |
| ! | CAATTGACTTTGTTGCTGTT+CGG | + | chr5.1:13576507-13576526 | MS.gene67707:intron | 35.0% |
| ! | CACCATTGTTAACGTTGATT+TGG | + | chr5.1:13575934-13575953 | MS.gene67707:CDS | 35.0% |
| ! | CTAGGAAATTGTGTTTTCAC+GGG | + | chr5.1:13580582-13580601 | MS.gene67707:CDS | 35.0% |
| ! | CTATGAAAAAGTATGCTGAC+CGG | - | chr5.1:13579489-13579508 | None:intergenic | 35.0% |
| ! | TAGAGGAGAGAGTATGTAAT+GGG | - | chr5.1:13578839-13578858 | None:intergenic | 35.0% |
| ! | TTAGAGGAGAGAGTATGTAA+TGG | - | chr5.1:13578840-13578859 | None:intergenic | 35.0% |
| ! | TTCCTAGAGAACCTTTTAGA+AGG | - | chr5.1:13580569-13580588 | None:intergenic | 35.0% |
| ! | TTTTGCTGAGTTAGTTGACA+GGG | - | chr5.1:13579560-13579579 | None:intergenic | 35.0% |
| ! | TTTTTGCTGAGTTAGTTGAC+AGG | - | chr5.1:13579561-13579580 | None:intergenic | 35.0% |
| !! | AATGTACTTTTGGCTGGAAA+AGG | + | chr5.1:13577820-13577839 | MS.gene67707:intron | 35.0% |
| !! | GATTAATTTGCATATGCCGT+CGG | - | chr5.1:13576294-13576313 | None:intergenic | 35.0% |
| !! | GGCGATTTTTGGATTTACAT+TGG | + | chr5.1:13579813-13579832 | MS.gene67707:intron | 35.0% |
| !! | GGTATATCAGGTTGATAAGA+AGG | + | chr5.1:13580518-13580537 | MS.gene67707:intron | 35.0% |
| !! | TTGTAGGTTGATTCTTCAGT+TGG | + | chr5.1:13577490-13577509 | MS.gene67707:intron | 35.0% |
| !!! | CATGTTTTGGGATACTTTGT+TGG | - | chr5.1:13578791-13578810 | None:intergenic | 35.0% |
| !!! | CCCTTTGTTATTCCTTTTCT+TGG | - | chr5.1:13578717-13578736 | None:intergenic | 35.0% |
| !!! | CTTTTGAAACTGTTTATGGG+AGG | - | chr5.1:13579636-13579655 | None:intergenic | 35.0% |
| !!! | GGGATACAGAATTTTTTGAG+TGG | + | chr5.1:13577668-13577687 | MS.gene67707:CDS | 35.0% |
| !!! | TTTCTCATGGCACCTTTTTT+AGG | + | chr5.1:13580124-13580143 | MS.gene67707:intron | 35.0% |
| AACCAAAGAATTGGTCGTAC+TGG | - | chr5.1:13579717-13579736 | None:intergenic | 40.0% | |
| AATATCTGCTAGGTGGTTAG+AGG | - | chr5.1:13578856-13578875 | None:intergenic | 40.0% | |
| ACATACACTTTCCAAACAGC+TGG | + | chr5.1:13578932-13578951 | MS.gene67707:intron | 40.0% | |
| ACCAATCAAGTTCTTCCCAA+GGG | - | chr5.1:13577539-13577558 | None:intergenic | 40.0% | |
| ACTTTGCATCCGATTGAGTA+AGG | - | chr5.1:13578082-13578101 | None:intergenic | 40.0% | |
| AGCAGAAGAAGACACTACTT+GGG | - | chr5.1:13579095-13579114 | None:intergenic | 40.0% | |
| AGTAGGCTGAGAAATTATGG+GGG | - | chr5.1:13579962-13579981 | None:intergenic | 40.0% | |
| AGTCAGGGCTACATTGAATT+TGG | + | chr5.1:13578346-13578365 | MS.gene67707:CDS | 40.0% | |
| AGTGTATGTCAGGAAAAGGA+AGG | - | chr5.1:13578921-13578940 | None:intergenic | 40.0% | |
| AGTTTCTTGTGGGTGATACA+TGG | + | chr5.1:13576552-13576571 | MS.gene67707:intron | 40.0% | |
| ATAGCATATGCCAGTGCATT+AGG | - | chr5.1:13578269-13578288 | None:intergenic | 40.0% | |
| ATCCAGTACGACCAATTCTT+TGG | + | chr5.1:13579712-13579731 | MS.gene67707:intron | 40.0% | |
| ATGTCCACAGTCATCATTTC+AGG | - | chr5.1:13580402-13580421 | None:intergenic | 40.0% | |
| CAACCCTGATCCGATATAAA+TGG | - | chr5.1:13575975-13575994 | None:intergenic | 40.0% | |
| CAATAAGGACCTTCTTTCCA+TGG | - | chr5.1:13576953-13576972 | None:intergenic | 40.0% | |
| CATGGAAATTGAGCTATGAC+AGG | - | chr5.1:13578052-13578071 | None:intergenic | 40.0% | |
| CCGTAGTGTTAGTGACAATA+AGG | - | chr5.1:13576968-13576987 | None:intergenic | 40.0% | |
| CGAACAGCAACAAAGTCAAT+TGG | - | chr5.1:13576509-13576528 | None:intergenic | 40.0% | |
| CGATGCAAAACACCTCAAAA+CGG | + | chr5.1:13579741-13579760 | MS.gene67707:intron | 40.0% | |
| CGGAGCTATCCCATTTATAT+CGG | + | chr5.1:13575962-13575981 | MS.gene67707:CDS | 40.0% | |
| CTATAAGCACACATTGAGGT+TGG | - | chr5.1:13577570-13577589 | None:intergenic | 40.0% | |
| CTCAAGAGGCTCAGATATTT+AGG | + | chr5.1:13576781-13576800 | MS.gene67707:intron | 40.0% | |
| CTTTGCATCCGATTGAGTAA+GGG | - | chr5.1:13578081-13578100 | None:intergenic | 40.0% | |
| GATCATGAGGTAGTTTCTTG+TGG | + | chr5.1:13576541-13576560 | MS.gene67707:intron | 40.0% | |
| GATGCAAAACACCTCAAAAC+GGG | + | chr5.1:13579742-13579761 | MS.gene67707:intron | 40.0% | |
| GCTGAGATATATGGAAAACC+GGG | + | chr5.1:13579275-13579294 | MS.gene67707:intron | 40.0% | |
| GGACACTATACAATTAGGGA+TGG | - | chr5.1:13576849-13576868 | None:intergenic | 40.0% | |
| GTCAGGGCTACATTGAATTT+GGG | + | chr5.1:13578347-13578366 | MS.gene67707:CDS | 40.0% | |
| GTGGCAAGAGAAAAATATGC+AGG | + | chr5.1:13577687-13577706 | MS.gene67707:CDS | 40.0% | |
| GTGTATGTCAGGAAAAGGAA+GGG | - | chr5.1:13578920-13578939 | None:intergenic | 40.0% | |
| GTGTCTATAAGCACACATTG+AGG | - | chr5.1:13577574-13577593 | None:intergenic | 40.0% | |
| GTTTCTTGTGGGTGATACAT+GGG | + | chr5.1:13576553-13576572 | MS.gene67707:intron | 40.0% | |
| TAAATCAGAAGTTAGGGCTC+AGG | - | chr5.1:13579381-13579400 | None:intergenic | 40.0% | |
| TAGAATCATCAATCCAACCG+AGG | - | chr5.1:13580326-13580345 | None:intergenic | 40.0% | |
| TAGGAAGTAGCCTATAAGAG+TGG | + | chr5.1:13576222-13576241 | MS.gene67707:intron | 40.0% | |
| TAGGCAATAGAAACTAGCGT+TGG | + | chr5.1:13580143-13580162 | MS.gene67707:intron | 40.0% | |
| TCAGATTCCAACCACTGTTA+TGG | + | chr5.1:13577326-13577345 | MS.gene67707:CDS | 40.0% | |
| TCCAGACTTTCATGTGGATA+CGG | - | chr5.1:13578975-13578994 | None:intergenic | 40.0% | |
| TGATTGCGTGTTCAACTGAT+AGG | + | chr5.1:13577164-13577183 | MS.gene67707:intron | 40.0% | |
| TGCACCTTTGTATCTAGACA+AGG | + | chr5.1:13576989-13577008 | MS.gene67707:CDS | 40.0% | |
| TGTATGTCAGGAAAAGGAAG+GGG | - | chr5.1:13578919-13578938 | None:intergenic | 40.0% | |
| TGTCATAGACTTGAACCATC+AGG | - | chr5.1:13577426-13577445 | None:intergenic | 40.0% | |
| TTAAATCTGTCATGGCGGTA+TGG | + | chr5.1:13580424-13580443 | MS.gene67707:intron | 40.0% | |
| TTTCCAGCAAAAATCCAACC+TGG | + | chr5.1:13575905-13575924 | MS.gene67707:CDS | 40.0% | |
| TTTCTTGTGGGTGATACATG+GGG | + | chr5.1:13576554-13576573 | MS.gene67707:intron | 40.0% | |
| ! | AAAAGTATGCTGACCGGAAA+AGG | - | chr5.1:13579483-13579502 | None:intergenic | 40.0% |
| ! | AGAGGAGAGAGTATGTAATG+GGG | - | chr5.1:13578838-13578857 | None:intergenic | 40.0% |
| ! | AGAGTATGTAATGGGGTGAT+GGG | - | chr5.1:13578831-13578850 | None:intergenic | 40.0% |
| ! | AGGTTGGATTTTTGCTGGAA+AGG | - | chr5.1:13575906-13575925 | None:intergenic | 40.0% |
| ! | ATCATTTCAGGAGGCACAAT+TGG | - | chr5.1:13580390-13580409 | None:intergenic | 40.0% |
| ! | CTGTTTGGAAAGTGTATGTC+AGG | - | chr5.1:13578931-13578950 | None:intergenic | 40.0% |
| ! | GGAAAGTGTATGTCAGGAAA+AGG | - | chr5.1:13578925-13578944 | None:intergenic | 40.0% |
| ! | GGGAAATTGACTTTGCAACA+AGG | + | chr5.1:13579060-13579079 | MS.gene67707:intron | 40.0% |
| ! | GGTTGGATTTTTGCTGGAAA+GGG | - | chr5.1:13575905-13575924 | None:intergenic | 40.0% |
| ! | GTTGATAAGAAGGTAGCAGA+TGG | + | chr5.1:13580528-13580547 | MS.gene67707:CDS | 40.0% |
| ! | GTTGGATTTTTGCTGGAAAG+GGG | - | chr5.1:13575904-13575923 | None:intergenic | 40.0% |
| ! | TTGGGAAATGTACTTTTGGC+TGG | + | chr5.1:13577814-13577833 | MS.gene67707:intron | 40.0% |
| ! | TTTGGGATACTTTGTTGGCT+AGG | - | chr5.1:13578786-13578805 | None:intergenic | 40.0% |
| !! | ATAGAAACTAGCGTTGGCTA+TGG | + | chr5.1:13580149-13580168 | MS.gene67707:CDS | 40.0% |
| !! | GAGAGTGTAATTTTACCGGA+TGG | + | chr5.1:13577053-13577072 | MS.gene67707:CDS | 40.0% |
| !! | GGAGTATTGATAGGACTCAT+GGG | - | chr5.1:13579003-13579022 | None:intergenic | 40.0% |
| !! | TAGAAACTAGCGTTGGCTAT+GGG | + | chr5.1:13580150-13580169 | MS.gene67707:CDS | 40.0% |
| !! | TAGGTTGATTCTTCAGTTGG+TGG | + | chr5.1:13577493-13577512 | MS.gene67707:intron | 40.0% |
| !! | TGAACAGTTGTTGGCTTCAA+GGG | - | chr5.1:13579173-13579192 | None:intergenic | 40.0% |
| !!! | CGTTTTGAGGTGTTTTGCAT+CGG | - | chr5.1:13579743-13579762 | None:intergenic | 40.0% |
| AACACCACGTAGGAATGAAG+CGG | - | chr5.1:13577298-13577317 | None:intergenic | 45.0% | |
| AAGTTAGGGCTCAGGTTCTT+CGG | - | chr5.1:13579373-13579392 | None:intergenic | 45.0% | |
| AATCATCAATCCAACCGAGG+CGG | - | chr5.1:13580323-13580342 | None:intergenic | 45.0% | |
| ACGGGATTCTATGCACAATC+TGG | + | chr5.1:13579760-13579779 | MS.gene67707:intron | 45.0% | |
| ACTGGTATAAACCATCCCCT+TGG | + | chr5.1:13577520-13577539 | MS.gene67707:CDS | 45.0% | |
| AGCAAAAACAGCCTCAACTC+TGG | + | chr5.1:13579573-13579592 | MS.gene67707:intron | 45.0% | |
| AGGCTCAGATATTTAGGGAC+AGG | + | chr5.1:13576787-13576806 | MS.gene67707:intron | 45.0% | |
| AGGTGGCATGAATATCTGCT+AGG | - | chr5.1:13578866-13578885 | None:intergenic | 45.0% | |
| ATATGCAGGCATTAATGGCC+AGG | + | chr5.1:13577701-13577720 | MS.gene67707:CDS | 45.0% | |
| ATCATGTGAAAACAAGGCCG+AGG | + | chr5.1:13578295-13578314 | MS.gene67707:CDS | 45.0% | |
| ATTCTTTCCACCACCGGAAA+AGG | + | chr5.1:13579346-13579365 | MS.gene67707:intron | 45.0% | |
| ATTGGTCGTACTGGATTCCA+TGG | - | chr5.1:13579708-13579727 | None:intergenic | 45.0% | |
| ATTTCCCAATCTGAGCCTTG+AGG | - | chr5.1:13579047-13579066 | None:intergenic | 45.0% | |
| CAATGGATGGTGAAGTGGAA+AGG | - | chr5.1:13579121-13579140 | None:intergenic | 45.0% | |
| CACCAATCAAGTTCTTCCCA+AGG | - | chr5.1:13577540-13577559 | None:intergenic | 45.0% | |
| CACGGGAGAATATGACAGAA+AGG | + | chr5.1:13580599-13580618 | MS.gene67707:CDS | 45.0% | |
| CATCGGAGCAACCAAAGAAT+TGG | - | chr5.1:13579726-13579745 | None:intergenic | 45.0% | |
| CCAATCAAGTTCTTCCCAAG+GGG | - | chr5.1:13577538-13577557 | None:intergenic | 45.0% | |
| CCAGACTTTCATGTGGATAC+GGG | - | chr5.1:13578974-13578993 | None:intergenic | 45.0% | |
| CCATTGAGTCTCGATTGGAT+CGG | + | chr5.1:13577214-13577233 | MS.gene67707:CDS | 45.0% | |
| CTGGTATAAACCATCCCCTT+GGG | + | chr5.1:13577521-13577540 | MS.gene67707:CDS | 45.0% | |
| CTTGAAGCCAACAACTGTTC+AGG | + | chr5.1:13579172-13579191 | MS.gene67707:intron | 45.0% | |
| GAGCAGAAGAAGACACTACT+TGG | - | chr5.1:13579096-13579115 | None:intergenic | 45.0% | |
| GATATCGTGATGTTTACGCG+AGG | + | chr5.1:13576585-13576604 | MS.gene67707:intron | 45.0% | |
| GATCCTATTCTTTCCACCAC+CGG | + | chr5.1:13579340-13579359 | MS.gene67707:intron | 45.0% | |
| GCAAGGAAAAACCAGAGTTG+AGG | - | chr5.1:13579587-13579606 | None:intergenic | 45.0% | |
| GGAATAAACGCGAGATCATG+AGG | + | chr5.1:13576528-13576547 | MS.gene67707:intron | 45.0% | |
| GTATGTCAGGAAAAGGAAGG+GGG | - | chr5.1:13578918-13578937 | None:intergenic | 45.0% | |
| GTGCATTAGGATCTCTGCAA+TGG | - | chr5.1:13578256-13578275 | None:intergenic | 45.0% | |
| TAAGACCTGTGCCATAACAG+TGG | - | chr5.1:13577340-13577359 | None:intergenic | 45.0% | |
| TACATTACCAGAGAGGGAAC+TGG | + | chr5.1:13577606-13577625 | MS.gene67707:CDS | 45.0% | |
| TAGGCATGTCCATGGAAAGA+AGG | + | chr5.1:13576941-13576960 | MS.gene67707:intron | 45.0% | |
| TATGCGCTGTGTTATCCTGA+TGG | + | chr5.1:13577408-13577427 | MS.gene67707:intron | 45.0% | |
| TATGTCAGGAAAAGGAAGGG+GGG | - | chr5.1:13578917-13578936 | None:intergenic | 45.0% | |
| TCAAGGGAAGTCGTAAAGGA+TGG | - | chr5.1:13579157-13579176 | None:intergenic | 45.0% | |
| TCCACAGTCATCATTTCAGG+AGG | - | chr5.1:13580399-13580418 | None:intergenic | 45.0% | |
| TCCACATGAAAGTCTGGATC+AGG | + | chr5.1:13578977-13578996 | MS.gene67707:intron | 45.0% | |
| TGGCATGAATATCTGCTAGG+TGG | - | chr5.1:13578863-13578882 | None:intergenic | 45.0% | |
| TGTGTGCTCCCTTACTCAAT+CGG | + | chr5.1:13578070-13578089 | MS.gene67707:intron | 45.0% | |
| TTCTTTCCACCACCGGAAAA+GGG | + | chr5.1:13579347-13579366 | MS.gene67707:intron | 45.0% | |
| TTGCAGAGATCCTAATGCAC+TGG | + | chr5.1:13578256-13578275 | MS.gene67707:intron | 45.0% | |
| TTGGTCGTACTGGATTCCAT+GGG | - | chr5.1:13579707-13579726 | None:intergenic | 45.0% | |
| TTGTACCACAATTCTGCCCA+TGG | + | chr5.1:13579688-13579707 | MS.gene67707:intron | 45.0% | |
| TTGTCCTCAAGGCTCAGATT+GGG | + | chr5.1:13579040-13579059 | MS.gene67707:intron | 45.0% | |
| ! | ACAACATTCATTGAAGGCGC+AGG | - | chr5.1:13579515-13579534 | None:intergenic | 45.0% |
| ! | ATTGAGTAAGGGAGCACACA+TGG | - | chr5.1:13578070-13578089 | None:intergenic | 45.0% |
| ! | CGCTCTTTTACCCCAAGAAA+AGG | + | chr5.1:13578702-13578721 | MS.gene67707:intron | 45.0% |
| ! | GAGAGTATGTAATGGGGTGA+TGG | - | chr5.1:13578832-13578851 | None:intergenic | 45.0% |
| ! | GAGTATGTAATGGGGTGATG+GGG | - | chr5.1:13578830-13578849 | None:intergenic | 45.0% |
| ! | GTGCATAGAATCCCGTTTTG+AGG | - | chr5.1:13579756-13579775 | None:intergenic | 45.0% |
| !! | ACACCAGGTTGGATTTTTGC+TGG | - | chr5.1:13575911-13575930 | None:intergenic | 45.0% |
| !! | ACCACTTTTCATGCTTCGAC+GGG | - | chr5.1:13579667-13579686 | None:intergenic | 45.0% |
| !! | CACCACTTTTCATGCTTCGA+CGG | - | chr5.1:13579668-13579687 | None:intergenic | 45.0% |
| !! | CTGAACAGTTGTTGGCTTCA+AGG | - | chr5.1:13579174-13579193 | None:intergenic | 45.0% |
| !! | GGGAGTATTGATAGGACTCA+TGG | - | chr5.1:13579004-13579023 | None:intergenic | 45.0% |
| !! | TCTTCAGTTGGTGGCAAAAC+TGG | + | chr5.1:13577502-13577521 | MS.gene67707:CDS | 45.0% |
| !! | TGGAAAAGGCATCTCTAGCT+TGG | + | chr5.1:13577834-13577853 | MS.gene67707:intron | 45.0% |
| !! | TTCTTGCTATGGTTTGCTGC+CGG | + | chr5.1:13579404-13579423 | MS.gene67707:intron | 45.0% |
| !! | TTTCCGGTGGTGGAAAGAAT+AGG | - | chr5.1:13579346-13579365 | None:intergenic | 45.0% |
| !! | TTTAAAAGAAAATTAAAATA+GGG | + | chr5.1:13577946-13577965 | MS.gene67707:intron | 5.0% |
| !!! | TTTTAAAAGAAAATTAAAAT+AGG | + | chr5.1:13577945-13577964 | MS.gene67707:intron | 5.0% |
| AACAGACTTGCCAGAAGGGT+TGG | - | chr5.1:13579224-13579243 | None:intergenic | 50.0% | |
| ACCTGTGCCATAACAGTGGT+TGG | - | chr5.1:13577336-13577355 | None:intergenic | 50.0% | |
| ATGAGAGAGAAGGTGGAGTC+AGG | + | chr5.1:13578330-13578349 | MS.gene67707:CDS | 50.0% | |
| ATGCACAATCTGGATCGGTG+AGG | + | chr5.1:13579770-13579789 | MS.gene67707:intron | 50.0% | |
| ATGGAAAACCGGGTGAACTC+TGG | + | chr5.1:13579285-13579304 | MS.gene67707:intron | 50.0% | |
| CAAGGCCATTGAGTCTCGAT+TGG | + | chr5.1:13577209-13577228 | MS.gene67707:CDS | 50.0% | |
| CCACAACAGACTTGCCAGAA+GGG | - | chr5.1:13579228-13579247 | None:intergenic | 50.0% | |
| CCCCTTGGGAAGAACTTGAT+TGG | + | chr5.1:13577535-13577554 | MS.gene67707:CDS | 50.0% | |
| CCCGTATCCACATGAAAGTC+TGG | + | chr5.1:13578971-13578990 | MS.gene67707:intron | 50.0% | |
| CCGATCCAATCGAGACTCAA+TGG | - | chr5.1:13577217-13577236 | None:intergenic | 50.0% | |
| CCTTGCAAGAATCGAACCAG+AGG | + | chr5.1:13579601-13579620 | MS.gene67707:intron | 50.0% | |
| CGAGGAACCTGAACAGTTGT+TGG | - | chr5.1:13579182-13579201 | None:intergenic | 50.0% | |
| CTCATCCAAGGACACAACCT+CGG | - | chr5.1:13578315-13578334 | None:intergenic | 50.0% | |
| CTGGTAGGAGTCATAGACTC+TGG | - | chr5.1:13578746-13578765 | None:intergenic | 50.0% | |
| CTTGTCCTCAAGGCTCAGAT+TGG | + | chr5.1:13579039-13579058 | MS.gene67707:intron | 50.0% | |
| GCCTCCTGAAATGATGACTG+TGG | + | chr5.1:13580395-13580414 | MS.gene67707:CDS | 50.0% | |
| GCCTGATCCAGACTTTCATG+TGG | - | chr5.1:13578981-13579000 | None:intergenic | 50.0% | |
| GGATTCCATGGGCAGAATTG+TGG | - | chr5.1:13579696-13579715 | None:intergenic | 50.0% | |
| GGCAGCAAACCATAGCAAGA+AGG | - | chr5.1:13579405-13579424 | None:intergenic | 50.0% | |
| GGCTTCAAGGGAAGTCGTAA+AGG | - | chr5.1:13579161-13579180 | None:intergenic | 50.0% | |
| GTGTCCTTGGATGAGAGAGA+AGG | + | chr5.1:13578320-13578339 | MS.gene67707:CDS | 50.0% | |
| GTTGACATGTCATACCGCCT+CGG | + | chr5.1:13580306-13580325 | MS.gene67707:CDS | 50.0% | |
| TCAAGTTCTTCCCAAGGGGA+TGG | - | chr5.1:13577534-13577553 | None:intergenic | 50.0% | |
| TCCAACCACTGTTATGGCAC+AGG | + | chr5.1:13577332-13577351 | MS.gene67707:CDS | 50.0% | |
| TCCACCTTCTCTCTCATCCA+AGG | - | chr5.1:13578327-13578346 | None:intergenic | 50.0% | |
| TCCTTGGATGAGAGAGAAGG+TGG | + | chr5.1:13578323-13578342 | MS.gene67707:CDS | 50.0% | |
| TCCTTGTACTGCTCACCATC+CGG | - | chr5.1:13577071-13577090 | None:intergenic | 50.0% | |
| TGAGAGAGAAGGTGGAGTCA+GGG | + | chr5.1:13578331-13578350 | MS.gene67707:CDS | 50.0% | |
| TGCAAGAATCGAACCAGAGG+CGG | + | chr5.1:13579604-13579623 | MS.gene67707:intron | 50.0% | |
| TGGTGAGCAGTACAAGGACA+TGG | + | chr5.1:13577073-13577092 | MS.gene67707:CDS | 50.0% | |
| TTGAGTCTCGATTGGATCGG+CGG | + | chr5.1:13577217-13577236 | MS.gene67707:CDS | 50.0% | |
| ! | ACTTTTGTTGCCCTTGGAGG+TGG | + | chr5.1:13577243-13577262 | MS.gene67707:CDS | 50.0% |
| ! | AGGAAAAGGAAGGGGGGTAT+AGG | - | chr5.1:13578911-13578930 | None:intergenic | 50.0% |
| ! | CACTTTTCATGCTTCGACGG+GGG | - | chr5.1:13579665-13579684 | None:intergenic | 50.0% |
| ! | CCTCTGGTTCGATTCTTGCA+AGG | - | chr5.1:13579604-13579623 | None:intergenic | 50.0% |
| ! | GGAAAAGGAAGGGGGGTATA+GGG | - | chr5.1:13578910-13578929 | None:intergenic | 50.0% |
| ! | TCCAAACAGCTGGCCTATGA+GGG | + | chr5.1:13578942-13578961 | MS.gene67707:intron | 50.0% |
| ! | TGCACTTTTGTTGCCCTTGG+AGG | + | chr5.1:13577240-13577259 | MS.gene67707:CDS | 50.0% |
| ! | TTAACAATGGTGGGGACACC+AGG | - | chr5.1:13575926-13575945 | None:intergenic | 50.0% |
| ! | TTCCAAACAGCTGGCCTATG+AGG | + | chr5.1:13578941-13578960 | MS.gene67707:intron | 50.0% |
| !! | CCACTTTTCATGCTTCGACG+GGG | - | chr5.1:13579666-13579685 | None:intergenic | 50.0% |
| AAGAATCGAACCAGAGGCGG+AGG | + | chr5.1:13579607-13579626 | MS.gene67707:intron | 55.0% | |
| AAGGGTTGGAGGTTGAGCCT+GGG | - | chr5.1:13579210-13579229 | None:intergenic | 55.0% | |
| ACAAGACTGCTTGCGACGGA+GGG | - | chr5.1:13579024-13579043 | None:intergenic | 55.0% | |
| ACATGTCATACCGCCTCGGT+TGG | + | chr5.1:13580310-13580329 | MS.gene67707:CDS | 55.0% | |
| ACCCTCATAGGCCAGCTGTT+TGG | - | chr5.1:13578946-13578965 | None:intergenic | 55.0% | |
| ACCGGATGGTGAGCAGTACA+AGG | + | chr5.1:13577067-13577086 | MS.gene67707:CDS | 55.0% | |
| AGACTTGCCAGAAGGGTTGG+AGG | - | chr5.1:13579221-13579240 | None:intergenic | 55.0% | |
| CAGAGAGGGAACTGGCATCA+GGG | + | chr5.1:13577614-13577633 | MS.gene67707:CDS | 55.0% | |
| CCCCGTCGAAGCATGAAAAG+TGG | + | chr5.1:13579663-13579682 | MS.gene67707:intron | 55.0% | |
| CCCTTCTGGCAAGTCTGTTG+TGG | + | chr5.1:13579225-13579244 | MS.gene67707:intron | 55.0% | |
| CTTTCATGTGGATACGGGCG+TGG | - | chr5.1:13578969-13578988 | None:intergenic | 55.0% | |
| GAGGACAAGACTGCTTGCGA+CGG | - | chr5.1:13579028-13579047 | None:intergenic | 55.0% | |
| GCCAATCACACCACCTCCAA+GGG | - | chr5.1:13577256-13577275 | None:intergenic | 55.0% | |
| GCCACAACAGACTTGCCAGA+AGG | - | chr5.1:13579229-13579248 | None:intergenic | 55.0% | |
| GGTGTGATTGGCGACATGTG+TGG | + | chr5.1:13577264-13577283 | MS.gene67707:CDS | 55.0% | |
| ! | CAGGTTCTTCGGCCCTTTTC+CGG | - | chr5.1:13579362-13579381 | None:intergenic | 55.0% |
| ! | CGCAAGCAGTCTTGTCCTCA+AGG | + | chr5.1:13579029-13579048 | MS.gene67707:intron | 55.0% |
| ! | CGGTGCACTTTTGTTGCCCT+TGG | + | chr5.1:13577237-13577256 | MS.gene67707:CDS | 55.0% |
| !! | GCGACGGAGGGAGTATTGAT+AGG | - | chr5.1:13579012-13579031 | None:intergenic | 55.0% |
| AGAGGCTGTTGCAGCTGGCA+CGG | + | chr5.1:13580187-13580206 | MS.gene67707:CDS | 60.0% | |
| AGGGTTGGAGGTTGAGCCTG+GGG | - | chr5.1:13579209-13579228 | None:intergenic | 60.0% | |
| ATACGGGCGTGGACCCTCAT+AGG | - | chr5.1:13578958-13578977 | None:intergenic | 60.0% | |
| CAAGGCCGAGGTTGTGTCCT+TGG | + | chr5.1:13578307-13578326 | MS.gene67707:CDS | 60.0% | |
| CATGGAGAGGCTGTTGCAGC+TGG | + | chr5.1:13580182-13580201 | MS.gene67707:CDS | 60.0% | |
| CCAGAGAGGGAACTGGCATC+AGG | + | chr5.1:13577613-13577632 | MS.gene67707:CDS | 60.0% | |
| CCTGATGCCAGTTCCCTCTC+TGG | - | chr5.1:13577616-13577635 | None:intergenic | 60.0% | |
| CGCCAATCACACCACCTCCA+AGG | - | chr5.1:13577257-13577276 | None:intergenic | 60.0% | |
| GAAGGGTTGGAGGTTGAGCC+TGG | - | chr5.1:13579211-13579230 | None:intergenic | 60.0% | |
| GACAAGACTGCTTGCGACGG+AGG | - | chr5.1:13579025-13579044 | None:intergenic | 60.0% | |
| GCCCTTGGAGGTGGTGTGAT+TGG | + | chr5.1:13577252-13577271 | MS.gene67707:CDS | 60.0% | |
| GGCTATGGGCAGTGGCTTCA+TGG | + | chr5.1:13580164-13580183 | MS.gene67707:CDS | 60.0% | |
| GGCTCAACCTCCAACCCTTC+TGG | + | chr5.1:13579211-13579230 | MS.gene67707:intron | 60.0% | |
| TCAGGTTCCTCGATGTCCCC+AGG | + | chr5.1:13579190-13579209 | MS.gene67707:intron | 60.0% | |
| TGGGCAGTGGCTTCATGGAG+AGG | + | chr5.1:13580169-13580188 | MS.gene67707:CDS | 60.0% | |
| ! | CAATGGTGGGGACACCAGGT+TGG | - | chr5.1:13575922-13575941 | None:intergenic | 60.0% |
| ! | GCTGCCGCTTCATTCCTACG+TGG | + | chr5.1:13577291-13577310 | MS.gene67707:CDS | 60.0% |
| ! | GTTCTTCGGCCCTTTTCCGG+TGG | - | chr5.1:13579359-13579378 | None:intergenic | 60.0% |
| ! | TTCTCAAGTTGCGCCCGCAC+CGG | - | chr5.1:13579426-13579445 | None:intergenic | 60.0% |
| !! | CTAGCGTTGGCTATGGGCAG+TGG | + | chr5.1:13580156-13580175 | MS.gene67707:CDS | 60.0% |
| !! | CTATGGTTTGCTGCCGGTGC+GGG | + | chr5.1:13579410-13579429 | MS.gene67707:intron | 60.0% |
| !! | GCTATGGTTTGCTGCCGGTG+CGG | + | chr5.1:13579409-13579428 | MS.gene67707:intron | 60.0% |
| !! | TGAGGGTGCCAGAGTTCACC+CGG | - | chr5.1:13579296-13579315 | None:intergenic | 60.0% |
| !! | TGGGGTGATGGGGAGTTGTG+AGG | - | chr5.1:13578820-13578839 | None:intergenic | 60.0% |
| GGGTGAACTCTGGCACCCTC+AGG | + | chr5.1:13579295-13579314 | MS.gene67707:intron | 65.0% | |
| GGTTGAGCCTGGGGACATCG+AGG | - | chr5.1:13579200-13579219 | None:intergenic | 65.0% | |
| TGGGAGGAAACCTCCGCCTC+TGG | - | chr5.1:13579620-13579639 | None:intergenic | 65.0% | |
| ! | CTTCGGCCCTTTTCCGGTGG+TGG | - | chr5.1:13579356-13579375 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 13575896 | 13580659 | 13575896 | ID=MS.gene67707 |
| chr5.1 | mRNA | 13575896 | 13580659 | 13575896 | ID=MS.gene67707.t1;Parent=MS.gene67707 |
| chr5.1 | exon | 13575896 | 13576020 | 13575896 | ID=MS.gene67707.t1.exon1;Parent=MS.gene67707.t1 |
| chr5.1 | CDS | 13575896 | 13576020 | 13575896 | ID=cds.MS.gene67707.t1;Parent=MS.gene67707.t1 |
| chr5.1 | exon | 13576944 | 13577094 | 13576944 | ID=MS.gene67707.t1.exon2;Parent=MS.gene67707.t1 |
| chr5.1 | CDS | 13576944 | 13577094 | 13576944 | ID=cds.MS.gene67707.t1;Parent=MS.gene67707.t1 |
| chr5.1 | exon | 13577186 | 13577353 | 13577186 | ID=MS.gene67707.t1.exon3;Parent=MS.gene67707.t1 |
| chr5.1 | CDS | 13577186 | 13577353 | 13577186 | ID=cds.MS.gene67707.t1;Parent=MS.gene67707.t1 |
| chr5.1 | exon | 13577496 | 13577722 | 13577496 | ID=MS.gene67707.t1.exon4;Parent=MS.gene67707.t1 |
| chr5.1 | CDS | 13577496 | 13577722 | 13577496 | ID=cds.MS.gene67707.t1;Parent=MS.gene67707.t1 |
| chr5.1 | exon | 13578262 | 13578385 | 13578262 | ID=MS.gene67707.t1.exon5;Parent=MS.gene67707.t1 |
| chr5.1 | CDS | 13578262 | 13578385 | 13578262 | ID=cds.MS.gene67707.t1;Parent=MS.gene67707.t1 |
| chr5.1 | exon | 13580146 | 13580208 | 13580146 | ID=MS.gene67707.t1.exon6;Parent=MS.gene67707.t1 |
| chr5.1 | CDS | 13580146 | 13580208 | 13580146 | ID=cds.MS.gene67707.t1;Parent=MS.gene67707.t1 |
| chr5.1 | exon | 13580297 | 13580440 | 13580297 | ID=MS.gene67707.t1.exon7;Parent=MS.gene67707.t1 |
| chr5.1 | CDS | 13580297 | 13580440 | 13580297 | ID=cds.MS.gene67707.t1;Parent=MS.gene67707.t1 |
| chr5.1 | exon | 13580528 | 13580659 | 13580528 | ID=MS.gene67707.t1.exon8;Parent=MS.gene67707.t1 |
| chr5.1 | CDS | 13580528 | 13580659 | 13580528 | ID=cds.MS.gene67707.t1;Parent=MS.gene67707.t1 |
| Gene Sequence |
| Protein sequence |
