Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene67737.t1 | XP_003595074.1 | 92 | 313 | 25 | 0 | 1 | 313 | 1 | 313 | 5.00E-127 | 464.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene67737.t1 | Q9LU68 | 35.1 | 228 | 98 | 8 | 63 | 257 | 62 | 272 | 2.3e-16 | 87.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene67737.t1 | G7IG87 | 92.0 | 313 | 25 | 0 | 1 | 313 | 1 | 313 | 3.6e-127 | 464.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049711 | MS.gene67737 | 0.81369 | 2.25E-51 | -1.69E-46 |
MS.gene050559 | MS.gene67737 | 0.801549 | 8.54E-49 | -1.69E-46 |
MS.gene051279 | MS.gene67737 | 0.80463 | 1.97E-49 | -1.69E-46 |
MS.gene053226 | MS.gene67737 | 0.8103 | 1.23E-50 | -1.69E-46 |
MS.gene054651 | MS.gene67737 | 0.806282 | 8.87E-50 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene67737.t1 | MTR_2g038010 | 95.333 | 300 | 14 | 0 | 14 | 313 | 14 | 313 | 2.39e-177 | 493 |
MS.gene67737.t1 | MTR_4g127420 | 39.711 | 277 | 130 | 8 | 53 | 311 | 51 | 308 | 1.14e-28 | 114 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene67737.t1 | AT5G57180 | 31.988 | 322 | 138 | 10 | 53 | 311 | 52 | 355 | 3.62e-29 | 115 |
MS.gene67737.t1 | AT5G57180 | 31.988 | 322 | 138 | 10 | 53 | 311 | 52 | 355 | 3.62e-29 | 115 |
MS.gene67737.t1 | AT5G57180 | 31.988 | 322 | 138 | 10 | 53 | 311 | 52 | 355 | 9.52e-29 | 114 |
MS.gene67737.t1 | AT5G57180 | 31.988 | 322 | 138 | 10 | 53 | 311 | 52 | 355 | 1.27e-28 | 114 |
MS.gene67737.t1 | AT4G25990 | 35.319 | 235 | 116 | 9 | 32 | 257 | 18 | 225 | 2.49e-15 | 76.3 |
MS.gene67737.t1 | AT4G25990 | 35.319 | 235 | 116 | 9 | 32 | 257 | 18 | 225 | 2.63e-15 | 76.3 |
MS.gene67737.t1 | AT4G25990 | 35.319 | 235 | 116 | 9 | 32 | 257 | 18 | 225 | 3.20e-15 | 76.3 |
Find 88 sgRNAs with CRISPR-Local
Find 98 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CGATGTCAGCTTGTTGAATT+TGG | 0.161057 | 2.3:-50976287 | MS.gene67737:CDS |
TCCTTCTCCGCCGCTATTTC+CGG | 0.179986 | 2.3:+50976402 | None:intergenic |
GAGAAAGAGGAAGAGGTTTC+TGG | 0.210680 | 2.3:-50976550 | MS.gene67737:CDS |
AACATTGAAATTTAATGAAT+TGG | 0.254527 | 2.3:+50976972 | None:intergenic |
AGGTCTCTTTCGATTGGTTC+GGG | 0.284013 | 2.3:+50976822 | None:intergenic |
ATTTGATTGTAAATCGATTC+TGG | 0.285202 | 2.3:-50976482 | MS.gene67737:CDS |
TCGATTGGTTCGGGGTCTTT+TGG | 0.296838 | 2.3:+50976831 | None:intergenic |
GAAGTGGTGGAACGAGATTC+TGG | 0.300365 | 2.3:-50976511 | MS.gene67737:CDS |
TAGGTCTCTTTCGATTGGTT+CGG | 0.325908 | 2.3:+50976821 | None:intergenic |
AATCCGTGGTTTGGGCGTTT+TGG | 0.332255 | 2.3:-50976349 | MS.gene67737:CDS |
GCCGGTTTCTTCTTCAATCC+TGG | 0.341550 | 2.3:+50976238 | None:intergenic |
GCTTCGTTGTAGGTTTGATT+AGG | 0.345142 | 2.3:+50976802 | None:intergenic |
TTTGGTTCGGATAGCGCTTT+GGG | 0.350171 | 2.3:+50976849 | None:intergenic |
GAGAGAGTGAATCCGTGGTT+TGG | 0.364752 | 2.3:-50976358 | MS.gene67737:CDS |
GGAGAAGAGGAATTCGAGTT+TGG | 0.365864 | 2.3:-50976158 | MS.gene67737:CDS |
TAGGAATTTGTGGTCGGAAC+GGG | 0.371859 | 2.3:-50976098 | MS.gene67737:CDS |
GGAGAAGGAGGTTTCTGTTA+TGG | 0.382850 | 2.3:-50976388 | MS.gene67737:CDS |
TAACTCAGCGGCTTCGTTGT+AGG | 0.395497 | 2.3:+50976792 | None:intergenic |
CGGCAAAATCACCGGCGAAA+TGG | 0.402834 | 2.3:+50976070 | None:intergenic |
GGTTATGTTATTGCTAGGTT+CGG | 0.408994 | 2.3:+50976870 | None:intergenic |
AGAGAGTGAATCCGTGGTTT+GGG | 0.414523 | 2.3:-50976357 | MS.gene67737:CDS |
CCACAACACTCCGTTACAAC+AGG | 0.422127 | 2.3:+50976700 | None:intergenic |
GGTTTCTGGAGTGGTGAATT+CGG | 0.424243 | 2.3:-50976536 | MS.gene67737:CDS |
AAACAGGTTCGGATACGCTT+TGG | 0.442881 | 2.3:+50976765 | None:intergenic |
TGAGGTTAATGTGGAGGATG+AGG | 0.445030 | 2.3:+50976936 | None:intergenic |
AACTGAACTACGCGGATGTT+AGG | 0.451034 | 2.3:-50976117 | MS.gene67737:CDS |
CTGGAAGATGAGATTGAGGA+AGG | 0.454280 | 2.3:-50976463 | MS.gene67737:CDS |
TGAGAAAGAGAAAGAGGAAG+AGG | 0.459393 | 2.3:-50976557 | MS.gene67737:CDS |
GATGTTCTTGAAATCTCGCC+AGG | 0.468583 | 2.3:-50976256 | MS.gene67737:CDS |
ACACTCCGTTACAACAGGTT+TGG | 0.470904 | 2.3:+50976705 | None:intergenic |
CTTTGGGTTATGTTATTGCT+AGG | 0.481081 | 2.3:+50976865 | None:intergenic |
TCCGGAAATAGCGGCGGAGA+AGG | 0.484410 | 2.3:-50976403 | MS.gene67737:CDS |
GGAATTAAGTGAGGTTAATG+TGG | 0.484512 | 2.3:+50976927 | None:intergenic |
TTGATTAGGTCTCTTTCGAT+TGG | 0.488412 | 2.3:+50976816 | None:intergenic |
ACGCGGATGTTAGGAATTTG+TGG | 0.489666 | 2.3:-50976108 | MS.gene67737:CDS |
TTTAGGTTACGAAACAGGTT+CGG | 0.499384 | 2.3:+50976754 | None:intergenic |
TGTTCGTGAGAAAGAGAAAG+AGG | 0.506328 | 2.3:-50976563 | MS.gene67737:CDS |
AGAAAGAAAACGTGGAGAAG+AGG | 0.513497 | 2.3:-50976171 | MS.gene67737:CDS |
GAGATTGTTAATGTTGATGA+AGG | 0.515055 | 2.3:+50976892 | None:intergenic |
TCACTTCCTCTAAAATCAAA+CGG | 0.521600 | 2.3:+50976649 | None:intergenic |
GGCGGCGGTGATTCCTATGC+CGG | 0.527648 | 2.3:-50976218 | MS.gene67737:CDS |
GCCAGGATTGAAGAAGAAAC+CGG | 0.529667 | 2.3:-50976239 | MS.gene67737:CDS |
AGAGGAAGAGGTTTCTGGAG+TGG | 0.529786 | 2.3:-50976545 | MS.gene67737:CDS |
AACGGGGTTTGCCATTTCGC+CGG | 0.529803 | 2.3:-50976081 | MS.gene67737:CDS |
GAAGGGATTGATAGTATCAT+CGG | 0.536499 | 2.3:-50976445 | MS.gene67737:CDS |
CGAGTTTGGCTTTGCCTCTG+CGG | 0.537308 | 2.3:-50976144 | MS.gene67737:CDS |
TGATAGTATCATCGGGAGTA+CGG | 0.539956 | 2.3:-50976437 | MS.gene67737:CDS |
GGTGATTCCTATGCCGGCGG+CGG | 0.554261 | 2.3:-50976212 | MS.gene67737:CDS |
GGAGGTTTCTGTTATGGCGG+CGG | 0.558777 | 2.3:-50976382 | MS.gene67737:CDS |
TTAGGAATTTGTGGTCGGAA+CGG | 0.563469 | 2.3:-50976099 | MS.gene67737:CDS |
TGGAAGATGAGATTGAGGAA+GGG | 0.564697 | 2.3:-50976462 | MS.gene67737:CDS |
GGCATAGGAATCACCGCCGC+CGG | 0.565478 | 2.3:+50976220 | None:intergenic |
GATTCTGGAAGATGAGATTG+AGG | 0.567004 | 2.3:-50976467 | MS.gene67737:CDS |
AGGAATTTGTGGTCGGAACG+GGG | 0.568258 | 2.3:-50976097 | MS.gene67737:CDS |
AAGGGATTGATAGTATCATC+GGG | 0.575119 | 2.3:-50976444 | MS.gene67737:CDS |
ATTAGAAGAGGAATTAAGTG+AGG | 0.575275 | 2.3:+50976918 | None:intergenic |
GAAAACTACTCCGGAAATAG+CGG | 0.578730 | 2.3:-50976412 | MS.gene67737:CDS |
CAGCTTGTTGAATTTGGCGA+TGG | 0.579144 | 2.3:-50976281 | MS.gene67737:CDS |
ATTCACCAAACCTGTTGTAA+CGG | 0.579716 | 2.3:-50976710 | MS.gene67737:CDS |
ACAGGTTTGGTGAATTTACA+CGG | 0.581535 | 2.3:+50976718 | None:intergenic |
CAAATGAGTTCAAGTGTAAG+CGG | 0.582047 | 2.3:-50977000 | MS.gene67737:CDS |
CCGCCAAAACGCCCAAACCA+CGG | 0.586894 | 2.3:+50976346 | None:intergenic |
ATTAAGTGAGGTTAATGTGG+AGG | 0.592696 | 2.3:+50976930 | None:intergenic |
GGCGGTGATTCCTATGCCGG+CGG | 0.608446 | 2.3:-50976215 | MS.gene67737:CDS |
GGAAATAGCGGCGGAGAAGG+AGG | 0.611138 | 2.3:-50976400 | MS.gene67737:CDS |
TGATGAAGGTGAATTAGAAG+AGG | 0.617037 | 2.3:+50976906 | None:intergenic |
GGTCTCTTTCGATTGGTTCG+GGG | 0.618967 | 2.3:+50976823 | None:intergenic |
ACAAGCTGACATCGCTGACG+TGG | 0.627168 | 2.3:+50976296 | None:intergenic |
GGATGTTAGGAATTTGTGGT+CGG | 0.629537 | 2.3:-50976104 | MS.gene67737:CDS |
GAAGGAGGTTTCTGTTATGG+CGG | 0.636714 | 2.3:-50976385 | MS.gene67737:CDS |
GGTGAATTCGGATGAAGTGG+TGG | 0.643177 | 2.3:-50976524 | MS.gene67737:CDS |
AAATCAAACGGCAACAACAA+CGG | 0.643478 | 2.3:+50976661 | None:intergenic |
ATTGAAGAAGAAACCGGCGG+CGG | 0.644653 | 2.3:-50976233 | MS.gene67737:CDS |
CGCTTTGGAGAGTAACTCAG+CGG | 0.652661 | 2.3:+50976780 | None:intergenic |
TAGTTCAGTTTCAACCGCAG+AGG | 0.654507 | 2.3:+50976130 | None:intergenic |
GCAGAGGAAGAAAGAAAACG+TGG | 0.655845 | 2.3:-50976179 | MS.gene67737:CDS |
AGTGGTGAATTCGGATGAAG+TGG | 0.657000 | 2.3:-50976527 | MS.gene67737:CDS |
AGTACGGTTGAAAACTACTC+CGG | 0.658108 | 2.3:-50976421 | MS.gene67737:CDS |
AACTACTCCGGAAATAGCGG+CGG | 0.661324 | 2.3:-50976409 | MS.gene67737:CDS |
GCGGTGAGAGAGTGAATCCG+TGG | 0.661590 | 2.3:-50976363 | MS.gene67737:CDS |
TTGGTGAATTTACACGGCGG+CGG | 0.665308 | 2.3:+50976724 | None:intergenic |
GGTGGAACGAGATTCTGGAG+AGG | 0.681595 | 2.3:-50976506 | MS.gene67737:CDS |
ATGAGTTCAAGTGTAAGCGG+AGG | 0.690537 | 2.3:-50976997 | MS.gene67737:CDS |
AGGATTGAAGAAGAAACCGG+CGG | 0.719957 | 2.3:-50976236 | MS.gene67737:CDS |
GGAAAAGTGATTCTCAAACG+CGG | 0.725439 | 2.3:-50976594 | MS.gene67737:CDS |
GCGGTTGAAACTGAACTACG+CGG | 0.778633 | 2.3:-50976125 | MS.gene67737:CDS |
CCTGTTGTAACGGAGTGTTG+TGG | 0.784473 | 2.3:-50976700 | MS.gene67737:CDS |
GGTTTGGTGAATTTACACGG+CGG | 0.881700 | 2.3:+50976721 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AACATTGAAATTTAATGAAT+TGG | + | chr2.3:50976106-50976125 | None:intergenic | 15.0% |
!! | ATTTGATTGTAAATCGATTC+TGG | - | chr2.3:50976593-50976612 | MS.gene67737:CDS | 25.0% |
!!! | TGAATGATTTTTTGCTTGAA+AGG | - | chr2.3:50976460-50976479 | MS.gene67737:CDS | 25.0% |
ATTAGAAGAGGAATTAAGTG+AGG | + | chr2.3:50976160-50976179 | None:intergenic | 30.0% | |
! | GAGATTGTTAATGTTGATGA+AGG | + | chr2.3:50976186-50976205 | None:intergenic | 30.0% |
!! | TCACTTCCTCTAAAATCAAA+CGG | + | chr2.3:50976429-50976448 | None:intergenic | 30.0% |
!!! | GATTTTTTAGGTTACGAAAC+AGG | + | chr2.3:50976329-50976348 | None:intergenic | 30.0% |
AAATCAAACGGCAACAACAA+CGG | + | chr2.3:50976417-50976436 | None:intergenic | 35.0% | |
ATTAAGTGAGGTTAATGTGG+AGG | + | chr2.3:50976148-50976167 | None:intergenic | 35.0% | |
ATTCACCAAACCTGTTGTAA+CGG | - | chr2.3:50976365-50976384 | MS.gene67737:CDS | 35.0% | |
GGAATTAAGTGAGGTTAATG+TGG | + | chr2.3:50976151-50976170 | None:intergenic | 35.0% | |
GGTTATGTTATTGCTAGGTT+CGG | + | chr2.3:50976208-50976227 | None:intergenic | 35.0% | |
TGATGAAGGTGAATTAGAAG+AGG | + | chr2.3:50976172-50976191 | None:intergenic | 35.0% | |
TTGATTAGGTCTCTTTCGAT+TGG | + | chr2.3:50976262-50976281 | None:intergenic | 35.0% | |
! | AAGGGATTGATAGTATCATC+GGG | - | chr2.3:50976631-50976650 | MS.gene67737:CDS | 35.0% |
! | CTTTGGGTTATGTTATTGCT+AGG | + | chr2.3:50976213-50976232 | None:intergenic | 35.0% |
! | GAAGGGATTGATAGTATCAT+CGG | - | chr2.3:50976630-50976649 | MS.gene67737:CDS | 35.0% |
! | TTTAGGTTACGAAACAGGTT+CGG | + | chr2.3:50976324-50976343 | None:intergenic | 35.0% |
!! | ACAGGTTTGGTGAATTTACA+CGG | + | chr2.3:50976360-50976379 | None:intergenic | 35.0% |
!! | TTGTTGCCGTTTGATTTTAG+AGG | - | chr2.3:50976420-50976439 | MS.gene67737:CDS | 35.0% |
AGAAAGAAAACGTGGAGAAG+AGG | - | chr2.3:50976904-50976923 | MS.gene67737:CDS | 40.0% | |
AGTACGGTTGAAAACTACTC+CGG | - | chr2.3:50976654-50976673 | MS.gene67737:CDS | 40.0% | |
GAAAACTACTCCGGAAATAG+CGG | - | chr2.3:50976663-50976682 | MS.gene67737:CDS | 40.0% | |
GCTTCGTTGTAGGTTTGATT+AGG | + | chr2.3:50976276-50976295 | None:intergenic | 40.0% | |
GGAAAAGTGATTCTCAAACG+CGG | - | chr2.3:50976481-50976500 | MS.gene67737:CDS | 40.0% | |
GGATGTTAGGAATTTGTGGT+CGG | - | chr2.3:50976971-50976990 | MS.gene67737:CDS | 40.0% | |
TGAGAAAGAGAAAGAGGAAG+AGG | - | chr2.3:50976518-50976537 | MS.gene67737:CDS | 40.0% | |
TGATAGTATCATCGGGAGTA+CGG | - | chr2.3:50976638-50976657 | MS.gene67737:CDS | 40.0% | |
TGGAAGATGAGATTGAGGAA+GGG | - | chr2.3:50976613-50976632 | MS.gene67737:CDS | 40.0% | |
TGTTCGTGAGAAAGAGAAAG+AGG | - | chr2.3:50976512-50976531 | MS.gene67737:CDS | 40.0% | |
TTAGGAATTTGTGGTCGGAA+CGG | - | chr2.3:50976976-50976995 | MS.gene67737:CDS | 40.0% | |
! | GATTCTGGAAGATGAGATTG+AGG | - | chr2.3:50976608-50976627 | MS.gene67737:CDS | 40.0% |
! | TAGGTCTCTTTCGATTGGTT+CGG | + | chr2.3:50976257-50976276 | None:intergenic | 40.0% |
!! | CGATGTCAGCTTGTTGAATT+TGG | - | chr2.3:50976788-50976807 | MS.gene67737:CDS | 40.0% |
AAACAGGTTCGGATACGCTT+TGG | + | chr2.3:50976313-50976332 | None:intergenic | 45.0% | |
AACTGAACTACGCGGATGTT+AGG | - | chr2.3:50976958-50976977 | MS.gene67737:CDS | 45.0% | |
ACACTCCGTTACAACAGGTT+TGG | + | chr2.3:50976373-50976392 | None:intergenic | 45.0% | |
ACGCGGATGTTAGGAATTTG+TGG | - | chr2.3:50976967-50976986 | MS.gene67737:CDS | 45.0% | |
AGAGAGTGAATCCGTGGTTT+GGG | - | chr2.3:50976718-50976737 | MS.gene67737:CDS | 45.0% | |
AGGATTGAAGAAGAAACCGG+CGG | - | chr2.3:50976839-50976858 | MS.gene67737:CDS | 45.0% | |
AGTGGTGAATTCGGATGAAG+TGG | - | chr2.3:50976548-50976567 | MS.gene67737:CDS | 45.0% | |
ATGAGTTCAAGTGTAAGCGG+AGG | - | chr2.3:50976078-50976097 | MS.gene67737:CDS | 45.0% | |
CTGGAAGATGAGATTGAGGA+AGG | - | chr2.3:50976612-50976631 | MS.gene67737:CDS | 45.0% | |
GAAGGAGGTTTCTGTTATGG+CGG | - | chr2.3:50976690-50976709 | MS.gene67737:CDS | 45.0% | |
GAGAAAGAGGAAGAGGTTTC+TGG | - | chr2.3:50976525-50976544 | MS.gene67737:CDS | 45.0% | |
GATGTTCTTGAAATCTCGCC+AGG | - | chr2.3:50976819-50976838 | MS.gene67737:CDS | 45.0% | |
GCAGAGGAAGAAAGAAAACG+TGG | - | chr2.3:50976896-50976915 | MS.gene67737:CDS | 45.0% | |
GCCAGGATTGAAGAAGAAAC+CGG | - | chr2.3:50976836-50976855 | MS.gene67737:CDS | 45.0% | |
GGAGAAGGAGGTTTCTGTTA+TGG | - | chr2.3:50976687-50976706 | MS.gene67737:CDS | 45.0% | |
TAGGAATTTGTGGTCGGAAC+GGG | - | chr2.3:50976977-50976996 | MS.gene67737:CDS | 45.0% | |
TAGTTCAGTTTCAACCGCAG+AGG | + | chr2.3:50976948-50976967 | None:intergenic | 45.0% | |
TGAGGTTAATGTGGAGGATG+AGG | + | chr2.3:50976142-50976161 | None:intergenic | 45.0% | |
! | AGGTCTCTTTCGATTGGTTC+GGG | + | chr2.3:50976256-50976275 | None:intergenic | 45.0% |
! | GGAGAAGAGGAATTCGAGTT+TGG | - | chr2.3:50976917-50976936 | MS.gene67737:CDS | 45.0% |
!! | CAGCTTGTTGAATTTGGCGA+TGG | - | chr2.3:50976794-50976813 | MS.gene67737:CDS | 45.0% |
!! | GGTTTCTGGAGTGGTGAATT+CGG | - | chr2.3:50976539-50976558 | MS.gene67737:CDS | 45.0% |
!! | GGTTTGGTGAATTTACACGG+CGG | + | chr2.3:50976357-50976376 | None:intergenic | 45.0% |
!! | TTTGGTTCGGATAGCGCTTT+GGG | + | chr2.3:50976229-50976248 | None:intergenic | 45.0% |
!!! | TTTTGGTTCGGATAGCGCTT+TGG | + | chr2.3:50976230-50976249 | None:intergenic | 45.0% |
AACTACTCCGGAAATAGCGG+CGG | - | chr2.3:50976666-50976685 | MS.gene67737:CDS | 50.0% | |
AGGAATTTGTGGTCGGAACG+GGG | - | chr2.3:50976978-50976997 | MS.gene67737:CDS | 50.0% | |
ATTGAAGAAGAAACCGGCGG+CGG | - | chr2.3:50976842-50976861 | MS.gene67737:CDS | 50.0% | |
CCACAACACTCCGTTACAAC+AGG | + | chr2.3:50976378-50976397 | None:intergenic | 50.0% | |
GAGAGAGTGAATCCGTGGTT+TGG | - | chr2.3:50976717-50976736 | MS.gene67737:CDS | 50.0% | |
GCGGTTGAAACTGAACTACG+CGG | - | chr2.3:50976950-50976969 | MS.gene67737:CDS | 50.0% | |
GGTGAATTCGGATGAAGTGG+TGG | - | chr2.3:50976551-50976570 | MS.gene67737:CDS | 50.0% | |
TAACTCAGCGGCTTCGTTGT+AGG | + | chr2.3:50976286-50976305 | None:intergenic | 50.0% | |
TTGGTGAATTTACACGGCGG+CGG | + | chr2.3:50976354-50976373 | None:intergenic | 50.0% | |
! | AGAGGAAGAGGTTTCTGGAG+TGG | - | chr2.3:50976530-50976549 | MS.gene67737:CDS | 50.0% |
! | GAAGTGGTGGAACGAGATTC+TGG | - | chr2.3:50976564-50976583 | MS.gene67737:CDS | 50.0% |
! | GCCGGTTTCTTCTTCAATCC+TGG | + | chr2.3:50976840-50976859 | None:intergenic | 50.0% |
!! | AATCCGTGGTTTGGGCGTTT+TGG | - | chr2.3:50976726-50976745 | MS.gene67737:CDS | 50.0% |
!! | CCTGTTGTAACGGAGTGTTG+TGG | - | chr2.3:50976375-50976394 | MS.gene67737:CDS | 50.0% |
!! | CGCTTTGGAGAGTAACTCAG+CGG | + | chr2.3:50976298-50976317 | None:intergenic | 50.0% |
!! | GGTCTCTTTCGATTGGTTCG+GGG | + | chr2.3:50976255-50976274 | None:intergenic | 50.0% |
!! | TGGTTCGGGGTCTTTTGGTT+CGG | + | chr2.3:50976242-50976261 | None:intergenic | 50.0% |
!!! | ACGGCGGCGGTAGATTTTTT+AGG | + | chr2.3:50976341-50976360 | None:intergenic | 50.0% |
!!! | TCGATTGGTTCGGGGTCTTT+TGG | + | chr2.3:50976247-50976266 | None:intergenic | 50.0% |
ACAAGCTGACATCGCTGACG+TGG | + | chr2.3:50976782-50976801 | None:intergenic | 55.0% | |
CGGCGGAGAAAAAGAAGCAG+AGG | - | chr2.3:50976880-50976899 | MS.gene67737:CDS | 55.0% | |
GGAGGTTTCTGTTATGGCGG+CGG | - | chr2.3:50976693-50976712 | MS.gene67737:CDS | 55.0% | |
! | AACGGGGTTTGCCATTTCGC+CGG | - | chr2.3:50976994-50977013 | MS.gene67737:CDS | 55.0% |
! | GGTGGAACGAGATTCTGGAG+AGG | - | chr2.3:50976569-50976588 | MS.gene67737:CDS | 55.0% |
! | TCCTTCTCCGCCGCTATTTC+CGG | + | chr2.3:50976676-50976695 | None:intergenic | 55.0% |
! | TGCTTCTTTTTCTCCGCCGC+CGG | + | chr2.3:50976879-50976898 | None:intergenic | 55.0% |
!! | CGAGTTTGGCTTTGCCTCTG+CGG | - | chr2.3:50976931-50976950 | MS.gene67737:CDS | 55.0% |
!! | GGGCGTTTTGGCGGGAAAAT+CGG | - | chr2.3:50976738-50976757 | MS.gene67737:CDS | 55.0% |
CCGCCAAAACGCCCAAACCA+CGG | + | chr2.3:50976732-50976751 | None:intergenic | 60.0% | |
GCGGTGAGAGAGTGAATCCG+TGG | - | chr2.3:50976712-50976731 | MS.gene67737:CDS | 60.0% | |
GGAAATAGCGGCGGAGAAGG+AGG | - | chr2.3:50976675-50976694 | MS.gene67737:CDS | 60.0% | |
TCCGGAAATAGCGGCGGAGA+AGG | - | chr2.3:50976672-50976691 | MS.gene67737:CDS | 60.0% | |
! | TTTTTCTCCGCCGCCGGCAT+AGG | + | chr2.3:50976873-50976892 | None:intergenic | 60.0% |
!! | CCGTGGTTTGGGCGTTTTGG+CGG | - | chr2.3:50976729-50976748 | MS.gene67737:CDS | 60.0% |
!! | CGTGGTTTGGGCGTTTTGGC+GGG | - | chr2.3:50976730-50976749 | MS.gene67737:CDS | 60.0% |
GGCATAGGAATCACCGCCGC+CGG | + | chr2.3:50976858-50976877 | None:intergenic | 65.0% | |
GGCGGCGGTGATTCCTATGC+CGG | - | chr2.3:50976857-50976876 | MS.gene67737:CDS | 65.0% | |
GGCGGTGATTCCTATGCCGG+CGG | - | chr2.3:50976860-50976879 | MS.gene67737:CDS | 65.0% | |
GGTGATTCCTATGCCGGCGG+CGG | - | chr2.3:50976863-50976882 | MS.gene67737:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.3 | gene | 50976078 | 50977019 | 50976078 | ID=MS.gene67737 |
chr2.3 | mRNA | 50976078 | 50977019 | 50976078 | ID=MS.gene67737.t1;Parent=MS.gene67737 |
chr2.3 | exon | 50976078 | 50977019 | 50976078 | ID=MS.gene67737.t1.exon1;Parent=MS.gene67737.t1 |
chr2.3 | CDS | 50976078 | 50977019 | 50976078 | ID=cds.MS.gene67737.t1;Parent=MS.gene67737.t1 |
Gene Sequence |
Protein sequence |