Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68087.t1 | XP_013469316.1 | 94.8 | 388 | 17 | 2 | 1 | 388 | 1 | 385 | 1.20E-207 | 732.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68087.t1 | G4LTX4 | 69.3 | 388 | 104 | 5 | 1 | 387 | 1 | 374 | 7.8e-147 | 521.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68087.t1 | A0A072VN06 | 94.8 | 388 | 17 | 2 | 1 | 388 | 1 | 385 | 8.7e-208 | 732.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052469 | MS.gene68087 | 0.814314 | 1.64E-51 | -1.69E-46 |
| MS.gene053330 | MS.gene68087 | 0.836698 | 8.04E-57 | -1.69E-46 |
| MS.gene05553 | MS.gene68087 | 0.815339 | 9.73E-52 | -1.69E-46 |
| MS.gene05625 | MS.gene68087 | 0.815411 | 9.37E-52 | -1.69E-46 |
| MS.gene056305 | MS.gene68087 | 0.827115 | 1.87E-54 | -1.69E-46 |
| MS.gene056442 | MS.gene68087 | 0.818404 | 2.00E-52 | -1.69E-46 |
| MS.gene059247 | MS.gene68087 | 0.809195 | 2.13E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68087.t1 | MTR_1g090867 | 94.072 | 388 | 20 | 2 | 1 | 388 | 1 | 385 | 0.0 | 738 |
| MS.gene68087.t1 | MTR_3g094300 | 45.178 | 197 | 100 | 4 | 71 | 265 | 66 | 256 | 1.95e-44 | 155 |
| MS.gene68087.t1 | MTR_7g034465 | 32.246 | 276 | 167 | 10 | 97 | 360 | 222 | 489 | 2.00e-33 | 130 |
| MS.gene68087.t1 | MTR_7g034465 | 31.858 | 226 | 142 | 7 | 97 | 313 | 328 | 550 | 1.90e-26 | 111 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68087.t1 | AT3G52180 | 59.424 | 382 | 146 | 2 | 1 | 382 | 1 | 373 | 1.87e-157 | 448 |
| MS.gene68087.t1 | AT3G52180 | 66.906 | 278 | 92 | 0 | 105 | 382 | 1 | 278 | 1.63e-141 | 404 |
| MS.gene68087.t1 | AT3G52180 | 62.630 | 289 | 99 | 2 | 1 | 289 | 1 | 280 | 9.56e-118 | 343 |
| MS.gene68087.t1 | AT3G52180 | 62.630 | 289 | 99 | 2 | 1 | 289 | 1 | 280 | 1.79e-117 | 343 |
| MS.gene68087.t1 | AT3G10940 | 41.546 | 207 | 112 | 5 | 63 | 265 | 51 | 252 | 1.12e-44 | 156 |
| MS.gene68087.t1 | AT3G01510 | 31.716 | 268 | 162 | 8 | 97 | 351 | 140 | 399 | 6.18e-33 | 128 |
| MS.gene68087.t1 | AT3G01510 | 31.716 | 268 | 162 | 8 | 97 | 351 | 140 | 399 | 6.18e-33 | 128 |
| MS.gene68087.t1 | AT3G01510 | 31.716 | 268 | 162 | 8 | 97 | 351 | 282 | 541 | 1.83e-32 | 129 |
| MS.gene68087.t1 | AT3G52526 | 41.441 | 111 | 28 | 2 | 96 | 206 | 21 | 94 | 7.33e-17 | 75.9 |
Find 94 sgRNAs with CRISPR-Local
Find 338 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTAATACTAGTTAGATATTT+TGG | 0.114827 | 1.1:-66505274 | MS.gene68087:intron |
| CTGTTTGTCATCGAAATTTA+AGG | 0.130911 | 1.1:+66502205 | None:intergenic |
| TGCTCTACGGTGGAAATTTC+AGG | 0.182783 | 1.1:-66502630 | MS.gene68087:CDS |
| AAACAGAATAATAGAGTTTC+TGG | 0.188059 | 1.1:-66501055 | MS.gene68087:CDS |
| TTCAGTTGGCATATATGTTT+TGG | 0.189491 | 1.1:-66503842 | MS.gene68087:intron |
| CTTTGGTACTTAAAGCTTAC+AGG | 0.220091 | 1.1:-66502696 | MS.gene68087:intron |
| GTTGACATGGCCATCTTTAT+TGG | 0.230768 | 1.1:+66501440 | None:intergenic |
| TTTCTTGTGCAGGCTGCTTC+TGG | 0.237212 | 1.1:-66506220 | MS.gene68087:intron |
| TTGACTTATAGGCATGAATT+AGG | 0.265240 | 1.1:-66505613 | MS.gene68087:CDS |
| GAAATTTCAGGACTTGATAT+TGG | 0.272062 | 1.1:-66502618 | MS.gene68087:CDS |
| CGCAGTTTATCAACGTCTTC+AGG | 0.287983 | 1.1:+66505439 | None:intergenic |
| TATAAGGCAATTAATTCTAA+TGG | 0.309780 | 1.1:-66504723 | MS.gene68087:CDS |
| CTTAAATTTCGATGACAAAC+AGG | 0.311977 | 1.1:-66502204 | MS.gene68087:CDS |
| TGTAATTAGCAAATTATATA+AGG | 0.327149 | 1.1:-66504739 | MS.gene68087:CDS |
| ATCCTTCCGGACTTGATTGT+TGG | 0.328796 | 1.1:-66505574 | MS.gene68087:CDS |
| TGATCTACGAAAGCGGCTTC+CGG | 0.349920 | 1.1:-66504763 | MS.gene68087:CDS |
| TTGACATGGCCATCTTTATT+GGG | 0.352754 | 1.1:+66501441 | None:intergenic |
| TTCTTCTTCTTCTCTATCCC+TGG | 0.361202 | 1.1:-66507302 | MS.gene68087:intron |
| TGAGGCTAATACACTACTTC+TGG | 0.368444 | 1.1:-66503799 | MS.gene68087:intron |
| GTTGATAAACTGCGTAAAAT+CGG | 0.380846 | 1.1:-66505430 | MS.gene68087:CDS |
| TCGATGACAAACAGGGTTCA+TGG | 0.384520 | 1.1:-66502196 | MS.gene68087:CDS |
| CAGTGGCCGTGCCTCCCTTC+GGG | 0.392669 | 1.1:-66501121 | MS.gene68087:CDS |
| AATAAATAGACTCACAATAT+CGG | 0.395842 | 1.1:+66503134 | None:intergenic |
| TGTTCATCCTTCGTGAGATC+AGG | 0.409067 | 1.1:+66501078 | None:intergenic |
| AAAGTGACAGGCTTCTTACT+AGG | 0.410763 | 1.1:+66502672 | None:intergenic |
| GATGGTTCAGAGATCCTCAT+TGG | 0.427242 | 1.1:+66501023 | None:intergenic |
| ACAGTGGCCGTGCCTCCCTT+CGG | 0.430443 | 1.1:-66501122 | MS.gene68087:CDS |
| CATTCCAACCATGCTACTTA+AGG | 0.435096 | 1.1:-66507160 | MS.gene68087:intron |
| TGTTTGTCATCGAAATTTAA+GGG | 0.437209 | 1.1:+66502206 | None:intergenic |
| ACATATATACATTGCACTGC+TGG | 0.440089 | 1.1:-66504693 | MS.gene68087:CDS |
| TTTCAGGACTTGATATTGGA+TGG | 0.457996 | 1.1:-66502614 | MS.gene68087:CDS |
| GAGTACAAGTACATTGTTGA+TGG | 0.462857 | 1.1:-66501501 | MS.gene68087:CDS |
| AACACTTGCGTGCTGAGATA+AGG | 0.464716 | 1.1:-66505201 | MS.gene68087:intron |
| GAACTACAACTTCATCCTTC+CGG | 0.473825 | 1.1:-66505587 | MS.gene68087:CDS |
| AAGGTCATGCTGTCCAAAGC+TGG | 0.475543 | 1.1:-66503178 | MS.gene68087:CDS |
| AAGATATTGTGGTGGCGAGC+AGG | 0.477727 | 1.1:+66507337 | None:intergenic |
| TCCCTTCGGGAGAGAGTGAC+TGG | 0.483806 | 1.1:-66501108 | MS.gene68087:CDS |
| ATACATTGCACTGCTGGACT+TGG | 0.499456 | 1.1:-66504687 | MS.gene68087:CDS |
| AAGAGACATACCGCAACAGC+TGG | 0.503978 | 1.1:+66504657 | None:intergenic |
| AGTACATTGTTGATGGAGAA+TGG | 0.504240 | 1.1:-66501494 | MS.gene68087:CDS |
| TTCAGGACTTGATATTGGAT+GGG | 0.505174 | 1.1:-66502613 | MS.gene68087:CDS |
| GGGTTCATGGTTTCTCAAGA+AGG | 0.505456 | 1.1:-66502183 | MS.gene68087:CDS |
| TTCAGAATCTGAATCTTCCC+AGG | 0.507017 | 1.1:-66507485 | MS.gene68087:intron |
| ATGGCCATCTTTATTGGGAG+AGG | 0.509356 | 1.1:+66501446 | None:intergenic |
| TCAGGACTTGATATTGGATG+GGG | 0.510634 | 1.1:-66502612 | MS.gene68087:CDS |
| GATTGTTGGATCATGCCTGC+AGG | 0.516289 | 1.1:-66505560 | MS.gene68087:intron |
| CTTCGATAAAATTGTTGACA+TGG | 0.518353 | 1.1:+66501427 | None:intergenic |
| ATGACAGAAGCCATGGGTGC+TGG | 0.521445 | 1.1:-66506124 | MS.gene68087:intron |
| ATGGTTCAGAGATCCTCATT+GGG | 0.525064 | 1.1:+66501024 | None:intergenic |
| GTTACCTTAAGTAGCATGGT+TGG | 0.527020 | 1.1:+66507156 | None:intergenic |
| TTGTGGTGGCGAGCAGGAAG+AGG | 0.530076 | 1.1:+66507343 | None:intergenic |
| TGTCCCCACGACAAAGTGAC+AGG | 0.532631 | 1.1:+66502660 | None:intergenic |
| TTTAATGTCATTGCATGTGT+TGG | 0.534044 | 1.1:+66505222 | None:intergenic |
| TATAATTTGCTAATTACAGC+CGG | 0.535250 | 1.1:+66504744 | None:intergenic |
| TGAAGTTACCTTAAGTAGCA+TGG | 0.535870 | 1.1:+66507152 | None:intergenic |
| GAGGAGGAGCAGATAGTGTG+TGG | 0.537058 | 1.1:+66507362 | None:intergenic |
| CATGATCCAACAATCAAGTC+CGG | 0.539623 | 1.1:+66505568 | None:intergenic |
| TAGCTCTGATGTCGAGGAGG+AGG | 0.541130 | 1.1:-66506173 | MS.gene68087:CDS |
| AAGATGGAAGAAAGATATTG+TGG | 0.550960 | 1.1:+66507326 | None:intergenic |
| GTAACCTCTCCCAATAAAGA+TGG | 0.550991 | 1.1:-66501450 | MS.gene68087:CDS |
| GGGACACCGCAATTGCTCTA+CGG | 0.552218 | 1.1:-66502643 | MS.gene68087:CDS |
| CTCTCTCCCGAAGGGAGGCA+CGG | 0.552342 | 1.1:+66501115 | None:intergenic |
| TCTGGAAGCTCTTCCCAATG+AGG | 0.552898 | 1.1:-66501037 | MS.gene68087:CDS |
| GACAAGTAGCTCTGATGTCG+AGG | 0.561197 | 1.1:-66506179 | MS.gene68087:CDS |
| TAATAACATGACAGAAGCCA+TGG | 0.567902 | 1.1:-66506131 | MS.gene68087:CDS |
| TGGAAGAGCTCCAGCTGTTG+CGG | 0.568883 | 1.1:-66504667 | MS.gene68087:intron |
| AAGTGACAGGCTTCTTACTA+GGG | 0.570425 | 1.1:+66502673 | None:intergenic |
| CACCAGTCACTCTCTCCCGA+AGG | 0.571656 | 1.1:+66501106 | None:intergenic |
| TGGTGGCGAGCAGGAAGAGG+AGG | 0.575579 | 1.1:+66507346 | None:intergenic |
| GAGCTACTTGTCTCTGCACT+CGG | 0.576263 | 1.1:+66506190 | None:intergenic |
| GGCCACTGTCCGCATCATCA+AGG | 0.584686 | 1.1:+66501136 | None:intergenic |
| GAAGCCTGTCACTTTGTCGT+GGG | 0.585071 | 1.1:-66502664 | MS.gene68087:CDS |
| ATTAAACATACCAGCACCCA+TGG | 0.588156 | 1.1:+66506114 | None:intergenic |
| ACCAGTCACTCTCTCCCGAA+GGG | 0.593295 | 1.1:+66501107 | None:intergenic |
| AGAAGCCTGTCACTTTGTCG+TGG | 0.601786 | 1.1:-66502665 | MS.gene68087:CDS |
| TGTGTTGGCATATTCTCGTA+TGG | 0.603422 | 1.1:+66505237 | None:intergenic |
| TGAACAGGTCCTTGATGATG+CGG | 0.604730 | 1.1:-66501145 | MS.gene68087:intron |
| GTCCTTGATGATGCGGACAG+TGG | 0.606712 | 1.1:-66501138 | MS.gene68087:CDS |
| TTTCCACCGTAGAGCAATTG+CGG | 0.609902 | 1.1:+66502637 | None:intergenic |
| AAGGCAATTAATTCTAATGG+AGG | 0.612848 | 1.1:-66504720 | MS.gene68087:CDS |
| ATCCAACAATCAAGTCCGGA+AGG | 0.629842 | 1.1:+66505572 | None:intergenic |
| TGTGTGGAATTGTAAAACAG+AGG | 0.637298 | 1.1:+66507378 | None:intergenic |
| ATTCATTTGATCTACGAAAG+CGG | 0.641783 | 1.1:-66504770 | MS.gene68087:CDS |
| TTAAATTTCGATGACAAACA+GGG | 0.643133 | 1.1:-66502203 | MS.gene68087:CDS |
| ATGGAAGAAAGATATTGTGG+TGG | 0.657505 | 1.1:+66507329 | None:intergenic |
| AAGTAGCTCTGATGTCGAGG+AGG | 0.659228 | 1.1:-66506176 | MS.gene68087:CDS |
| ACACCGCAATTGCTCTACGG+TGG | 0.661178 | 1.1:-66502640 | MS.gene68087:CDS |
| AGTCACTCTCTCCCGAAGGG+AGG | 0.664364 | 1.1:+66501110 | None:intergenic |
| GTGGAATTGTAAAACAGAGG+AGG | 0.665928 | 1.1:+66507381 | None:intergenic |
| CAGGACTTGATATTGGATGG+GGG | 0.671888 | 1.1:-66502611 | MS.gene68087:CDS |
| AAGCCTGTCACTTTGTCGTG+GGG | 0.672587 | 1.1:-66502663 | MS.gene68087:CDS |
| AATAACATGACAGAAGCCAT+GGG | 0.682029 | 1.1:-66506130 | MS.gene68087:CDS |
| TCAGGGTTATAAACTCAATG+AGG | 0.689279 | 1.1:-66503817 | MS.gene68087:CDS |
| TGATGATCCTGATCTCACGA+AGG | 0.730198 | 1.1:-66501085 | MS.gene68087:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATAGTAATTTTACATTAAA+CGG | + | chr1.1:66506798-66506817 | None:intergenic | 10.0% |
| !!! | ATAAGAAAAATATCAATTTT+AGG | + | chr1.1:66504422-66504441 | None:intergenic | 10.0% |
| !!! | ATTTATTCAAAACATTTTAT+AGG | - | chr1.1:66506490-66506509 | MS.gene68087:intron | 10.0% |
| !! | AAATGTTGTAAAATCAATTT+CGG | + | chr1.1:66504894-66504913 | None:intergenic | 15.0% |
| !! | AAGGAAAAAATAAAAAGTAA+AGG | + | chr1.1:66501399-66501418 | None:intergenic | 15.0% |
| !! | ATAATATCAAATAAGAATGA+GGG | + | chr1.1:66505092-66505111 | None:intergenic | 15.0% |
| !! | ATCAACAATACAATAAAATA+AGG | - | chr1.1:66506455-66506474 | MS.gene68087:intron | 15.0% |
| !! | CATAATAAACAAAATTGTTT+AGG | + | chr1.1:66503166-66503185 | None:intergenic | 15.0% |
| !! | CATTAACTTTCTAAATTAAA+AGG | + | chr1.1:66505986-66506005 | None:intergenic | 15.0% |
| !! | TATAATATCAAATAAGAATG+AGG | + | chr1.1:66505093-66505112 | None:intergenic | 15.0% |
| !! | TCAACAATACAATAAAATAA+GGG | - | chr1.1:66506456-66506475 | MS.gene68087:intron | 15.0% |
| !! | TGTAATTAGCAAATTATATA+AGG | - | chr1.1:66503785-66503804 | MS.gene68087:intron | 15.0% |
| !! | TTTAACATTAAAATAAAGCT+TGG | + | chr1.1:66502463-66502482 | None:intergenic | 15.0% |
| !! | TTTGTTTATATAGAAAGATA+GGG | - | chr1.1:66504383-66504402 | MS.gene68087:intron | 15.0% |
| !!! | ATTTATATATAACTTTGAAG+AGG | + | chr1.1:66501483-66501502 | None:intergenic | 15.0% |
| !!! | TTAATACTAGTTAGATATTT+TGG | - | chr1.1:66503250-66503269 | MS.gene68087:intron | 15.0% |
| !!! | TTTTGTTTATATAGAAAGAT+AGG | - | chr1.1:66504382-66504401 | MS.gene68087:intron | 15.0% |
| !! | AAACATGATAAATGTTGTAA+TGG | + | chr1.1:66506078-66506097 | None:intergenic | 20.0% |
| !! | AAAGGAAAACATTTGTTTAA+TGG | + | chr1.1:66505631-66505650 | None:intergenic | 20.0% |
| !! | AAGATAAAGTGATTTATGTT+TGG | - | chr1.1:66501587-66501606 | MS.gene68087:intron | 20.0% |
| !! | AATAAATAGACTCACAATAT+CGG | + | chr1.1:66505393-66505412 | None:intergenic | 20.0% |
| !! | ACTTAGTTATTTGTGAATTA+TGG | - | chr1.1:66505014-66505033 | MS.gene68087:intron | 20.0% |
| !! | ATAAAAATAAAAGAAGTCAG+AGG | + | chr1.1:66503049-66503068 | None:intergenic | 20.0% |
| !! | ATGCAAATATTATAAACACA+AGG | + | chr1.1:66502782-66502801 | None:intergenic | 20.0% |
| !! | CATTAACCATTATTTATCTT+TGG | - | chr1.1:66505811-66505830 | MS.gene68087:intron | 20.0% |
| !! | CTTAGTTTATTTCAATAAAC+CGG | - | chr1.1:66506954-66506973 | MS.gene68087:intron | 20.0% |
| !! | GATAAATATCACTTGAAATT+TGG | + | chr1.1:66504622-66504641 | None:intergenic | 20.0% |
| !! | TAAGTACCAAAGATAAATAA+TGG | + | chr1.1:66505820-66505839 | None:intergenic | 20.0% |
| !! | TATAAGGCAATTAATTCTAA+TGG | - | chr1.1:66503801-66503820 | MS.gene68087:CDS | 20.0% |
| !! | TTAAAACACAAGAAAATTTC+TGG | - | chr1.1:66504326-66504345 | MS.gene68087:intron | 20.0% |
| !! | TTAACATTTCTATTTACTCA+TGG | - | chr1.1:66503629-66503648 | MS.gene68087:intron | 20.0% |
| !! | TTAATATGTTGTACAAAGAA+AGG | - | chr1.1:66503993-66504012 | MS.gene68087:intron | 20.0% |
| !! | TTTATATCAACTCGAATATT+TGG | - | chr1.1:66505749-66505768 | MS.gene68087:intron | 20.0% |
| !! | TTTCGGAAAGAAAAAAAAAA+TGG | + | chr1.1:66504877-66504896 | None:intergenic | 20.0% |
| !!! | AATCAAACATTCTTGTTTTT+GGG | + | chr1.1:66502236-66502255 | None:intergenic | 20.0% |
| !!! | ACATGGAGATATTTTTTAAA+TGG | - | chr1.1:66506013-66506032 | MS.gene68087:intron | 20.0% |
| !!! | AGAAATTTTCTTGTGTTTTA+AGG | + | chr1.1:66504327-66504346 | None:intergenic | 20.0% |
| !!! | AGAATTGATTTTATCATATC+TGG | + | chr1.1:66501813-66501832 | None:intergenic | 20.0% |
| !!! | ATATTCGAGTTGATATAAAA+AGG | + | chr1.1:66505748-66505767 | None:intergenic | 20.0% |
| !!! | ATTTGATGATTAATTCTTCT+TGG | - | chr1.1:66505244-66505263 | MS.gene68087:CDS | 20.0% |
| !!! | ATTTTGAGTGAATTGATTTA+AGG | - | chr1.1:66501736-66501755 | MS.gene68087:intron | 20.0% |
| !!! | TAATCAAACATTCTTGTTTT+TGG | + | chr1.1:66502237-66502256 | None:intergenic | 20.0% |
| !!! | TATGTTTTTGAGTTAATTCT+TGG | - | chr1.1:66503945-66503964 | MS.gene68087:intron | 20.0% |
| !!! | TATTCGAGTTGATATAAAAA+GGG | + | chr1.1:66505747-66505766 | None:intergenic | 20.0% |
| !!! | TTACAACATTTATCATGTTT+TGG | - | chr1.1:66506078-66506097 | MS.gene68087:intron | 20.0% |
| ! | AAACAGAATAATAGAGTTTC+TGG | - | chr1.1:66507469-66507488 | MS.gene68087:intron | 25.0% |
| ! | AAAGTTAATGCTACATTACA+TGG | - | chr1.1:66505996-66506015 | MS.gene68087:intron | 25.0% |
| ! | AAATTCCAACAGAAAAACAA+AGG | + | chr1.1:66506121-66506140 | None:intergenic | 25.0% |
| ! | AAGTCACTAAAGTTTAATTC+AGG | + | chr1.1:66504852-66504871 | None:intergenic | 25.0% |
| ! | AATTGATAGATGAAGTTGAA+AGG | + | chr1.1:66501418-66501437 | None:intergenic | 25.0% |
| ! | AGCTATATGACATAAAGAAA+GGG | + | chr1.1:66505212-66505231 | None:intergenic | 25.0% |
| ! | ATAATCATTGAAGAGCTTAT+CGG | - | chr1.1:66503400-66503419 | MS.gene68087:intron | 25.0% |
| ! | ATCATATCTGGATGATTTAA+AGG | + | chr1.1:66501801-66501820 | None:intergenic | 25.0% |
| ! | ATGCTATTGAGAAATCTAAA+AGG | + | chr1.1:66501885-66501904 | None:intergenic | 25.0% |
| ! | ATTGAAGCTATTATACCATT+TGG | + | chr1.1:66506769-66506788 | None:intergenic | 25.0% |
| ! | ATTTATCAGTTTATCTCCAT+TGG | - | chr1.1:66504635-66504654 | MS.gene68087:intron | 25.0% |
| ! | CAATTTCAATTTCAATTTCG+AGG | - | chr1.1:66501439-66501458 | MS.gene68087:CDS | 25.0% |
| ! | CTATGCAGTTGTTAATTTAA+AGG | - | chr1.1:66506396-66506415 | MS.gene68087:intron | 25.0% |
| ! | CTCTCTTAATACATTAGTAA+TGG | - | chr1.1:66501273-66501292 | MS.gene68087:intron | 25.0% |
| ! | GACTGTATTTAATAACCAAA+TGG | - | chr1.1:66506751-66506770 | MS.gene68087:intron | 25.0% |
| ! | TAAAGTGATTTATGTTTGGA+TGG | - | chr1.1:66501591-66501610 | MS.gene68087:intron | 25.0% |
| ! | TAAAGTTTAATTCAGGCAAT+TGG | + | chr1.1:66504845-66504864 | None:intergenic | 25.0% |
| ! | TCAAATTAGAACTACAAAGT+AGG | + | chr1.1:66502596-66502615 | None:intergenic | 25.0% |
| ! | TCTCTCTATCTTATGTATAT+GGG | - | chr1.1:66506725-66506744 | MS.gene68087:intron | 25.0% |
| ! | TCTGTTAAGAATTTAGTTGT+CGG | - | chr1.1:66506907-66506926 | MS.gene68087:intron | 25.0% |
| ! | TGTTTGTCATCGAAATTTAA+GGG | + | chr1.1:66506321-66506340 | None:intergenic | 25.0% |
| ! | TTAAATTTCGATGACAAACA+GGG | - | chr1.1:66506321-66506340 | MS.gene68087:intron | 25.0% |
| ! | TTATGTAGCAAATTTGTCAA+GGG | - | chr1.1:66505529-66505548 | MS.gene68087:intron | 25.0% |
| ! | TTATTTGTGAATTATGGAAC+AGG | - | chr1.1:66505020-66505039 | MS.gene68087:intron | 25.0% |
| ! | TTCTCTCTATCTTATGTATA+TGG | - | chr1.1:66506724-66506743 | MS.gene68087:intron | 25.0% |
| ! | TTCTGATTCTTTATATGCTA+AGG | - | chr1.1:66505151-66505170 | MS.gene68087:intron | 25.0% |
| ! | TTTATGTAGCAAATTTGTCA+AGG | - | chr1.1:66505528-66505547 | MS.gene68087:intron | 25.0% |
| !! | ACAAATGTTTTCCTTTGAAT+AGG | - | chr1.1:66505635-66505654 | MS.gene68087:intron | 25.0% |
| !! | ACTCTATCTTCATAGTATTT+TGG | + | chr1.1:66504511-66504530 | None:intergenic | 25.0% |
| !! | ATCATTTAAAACAGGGAATT+CGG | + | chr1.1:66501962-66501981 | None:intergenic | 25.0% |
| !! | ATTATACATTAGGGCTTTTA+TGG | - | chr1.1:66504282-66504301 | MS.gene68087:intron | 25.0% |
| !! | CATCTAATAAAGTAGCTTTA+TGG | - | chr1.1:66506688-66506707 | MS.gene68087:intron | 25.0% |
| !! | GCTTTTATGGTTGTATTTTA+GGG | - | chr1.1:66504295-66504314 | MS.gene68087:intron | 25.0% |
| !!! | AAAAAACTCAGAAGCATTTT+GGG | - | chr1.1:66502627-66502646 | MS.gene68087:CDS | 25.0% |
| !!! | ACATTTTAGTATGTCTATTG+AGG | - | chr1.1:66504781-66504800 | MS.gene68087:CDS | 25.0% |
| !!! | AGAATTGATTTTGACATGTT+TGG | + | chr1.1:66501700-66501719 | None:intergenic | 25.0% |
| !!! | ATCTTCATAGTATTTTGGAT+TGG | + | chr1.1:66504506-66504525 | None:intergenic | 25.0% |
| !!! | ATTCTTTTTTGAGTCATTAG+AGG | - | chr1.1:66507308-66507327 | MS.gene68087:CDS | 25.0% |
| !!! | ATTGTTTTACTCAAAAACTG+AGG | - | chr1.1:66505122-66505141 | MS.gene68087:intron | 25.0% |
| !!! | CATATGTTGGTTTTCAATTT+TGG | + | chr1.1:66501854-66501873 | None:intergenic | 25.0% |
| !!! | GTTTCTTTTTGTTTCACTTA+TGG | - | chr1.1:66502986-66503005 | MS.gene68087:intron | 25.0% |
| !!! | GTTTTTGAGTAAAACAATTG+AGG | + | chr1.1:66505120-66505139 | None:intergenic | 25.0% |
| !!! | TATAATTTGCTAATTACAGC+CGG | + | chr1.1:66503783-66503802 | None:intergenic | 25.0% |
| AAGATGGAAGAAAGATATTG+TGG | + | chr1.1:66501201-66501220 | None:intergenic | 30.0% | |
| AAGCAGTTTACTAGTTAATG+GGG | + | chr1.1:66506048-66506067 | None:intergenic | 30.0% | |
| AAGGCAATTAATTCTAATGG+AGG | - | chr1.1:66503804-66503823 | MS.gene68087:CDS | 30.0% | |
| AAGTTTCAACTACGTAGTTT+AGG | - | chr1.1:66507128-66507147 | MS.gene68087:intron | 30.0% | |
| AGAGATAGAAAAACAAATCC+AGG | + | chr1.1:66506600-66506619 | None:intergenic | 30.0% | |
| AGATAACCTATGTGTATTGA+AGG | - | chr1.1:66501934-66501953 | MS.gene68087:intron | 30.0% | |
| ATTCATTTGATCTACGAAAG+CGG | - | chr1.1:66503754-66503773 | MS.gene68087:intron | 30.0% | |
| ATTGAGTGATGTAATTCTGT+AGG | - | chr1.1:66502084-66502103 | MS.gene68087:intron | 30.0% | |
| ATTTGCATTCGACTCAAATT+TGG | - | chr1.1:66502794-66502813 | MS.gene68087:intron | 30.0% | |
| ATTTGCATTTCAGACTGTTA+TGG | - | chr1.1:66506839-66506858 | MS.gene68087:intron | 30.0% | |
| CAAAACAAACTGTTAGACAA+TGG | + | chr1.1:66504661-66504680 | None:intergenic | 30.0% | |
| CACATGAAGTAGAAGTTATT+AGG | + | chr1.1:66502260-66502279 | None:intergenic | 30.0% | |
| CCCTAATGTATAATTAACGA+CGG | + | chr1.1:66504276-66504295 | None:intergenic | 30.0% | |
| CCGTCGTTAATTATACATTA+GGG | - | chr1.1:66504273-66504292 | MS.gene68087:intron | 30.0% | |
| CTGTTTGTCATCGAAATTTA+AGG | + | chr1.1:66506322-66506341 | None:intergenic | 30.0% | |
| CTTAAATTTCGATGACAAAC+AGG | - | chr1.1:66506320-66506339 | MS.gene68087:intron | 30.0% | |
| CTTCGATAAAATTGTTGACA+TGG | + | chr1.1:66507100-66507119 | None:intergenic | 30.0% | |
| GAAATTTCAGGACTTGATAT+TGG | - | chr1.1:66505906-66505925 | MS.gene68087:intron | 30.0% | |
| GAAGCAGTTTACTAGTTAAT+GGG | + | chr1.1:66506049-66506068 | None:intergenic | 30.0% | |
| GACTGTCCAATCTAAATAAA+TGG | + | chr1.1:66502054-66502073 | None:intergenic | 30.0% | |
| GACTGTTATGGAATAATTAC+AGG | - | chr1.1:66506851-66506870 | MS.gene68087:intron | 30.0% | |
| GAGAAAATCAATCTATCAGT+TGG | + | chr1.1:66505054-66505073 | None:intergenic | 30.0% | |
| GAGAAAGAGTCTAATTTAAG+AGG | + | chr1.1:66502556-66502575 | None:intergenic | 30.0% | |
| GAGATAGAAAAACAAATCCA+GGG | + | chr1.1:66506599-66506618 | None:intergenic | 30.0% | |
| GAGCTATATGACATAAAGAA+AGG | + | chr1.1:66505213-66505232 | None:intergenic | 30.0% | |
| GTATCAGAATATTACGATGA+AGG | + | chr1.1:66506162-66506181 | None:intergenic | 30.0% | |
| GTTAATTCTTGGTATACTGA+AGG | - | chr1.1:66503956-66503975 | MS.gene68087:intron | 30.0% | |
| GTTATGGAATAATTACAGGA+TGG | - | chr1.1:66506855-66506874 | MS.gene68087:intron | 30.0% | |
| GTTTAGCACATTGTTAGAAA+GGG | + | chr1.1:66502887-66502906 | None:intergenic | 30.0% | |
| TAATATTAGCGAACATGTGA+AGG | + | chr1.1:66502749-66502768 | None:intergenic | 30.0% | |
| TAATCATTGAAGAGCTTATC+GGG | - | chr1.1:66503401-66503420 | MS.gene68087:intron | 30.0% | |
| TAGTTGCATCACTATCAAAT+TGG | - | chr1.1:66504966-66504985 | MS.gene68087:intron | 30.0% | |
| TCACTATCAAATTGGAAATC+TGG | - | chr1.1:66504974-66504993 | MS.gene68087:intron | 30.0% | |
| TCCAATATTTCTTGTAATGC+TGG | - | chr1.1:66501308-66501327 | MS.gene68087:intron | 30.0% | |
| TCCAGCATTACAAGAAATAT+TGG | + | chr1.1:66501312-66501331 | None:intergenic | 30.0% | |
| TGAAGCAGTTTACTAGTTAA+TGG | + | chr1.1:66506050-66506069 | None:intergenic | 30.0% | |
| TGTTTAGCACATTGTTAGAA+AGG | + | chr1.1:66502888-66502907 | None:intergenic | 30.0% | |
| TTAGCAATCAATGATGTTGA+TGG | - | chr1.1:66502109-66502128 | MS.gene68087:intron | 30.0% | |
| TTCTTCATATTCAATGTACC+AGG | - | chr1.1:66506989-66507008 | MS.gene68087:intron | 30.0% | |
| TTGACTTATAGGCATGAATT+AGG | - | chr1.1:66502911-66502930 | MS.gene68087:intron | 30.0% | |
| TTTAATGTCATTGCATGTGT+TGG | + | chr1.1:66503305-66503324 | None:intergenic | 30.0% | |
| TTTCCTTTGAATAGGAATCA+TGG | - | chr1.1:66505643-66505662 | MS.gene68087:intron | 30.0% | |
| ! | AAAAAGTGCATGACATACAA+TGG | + | chr1.1:66503702-66503721 | None:intergenic | 30.0% |
| ! | AACATCTGGACATCTTTTTA+TGG | + | chr1.1:66505465-66505484 | None:intergenic | 30.0% |
| ! | AGCTGAGATCATTTAAAACA+GGG | + | chr1.1:66501969-66501988 | None:intergenic | 30.0% |
| ! | ATGATCTCAGCTGTTAATTT+TGG | - | chr1.1:66501977-66501996 | MS.gene68087:intron | 30.0% |
| ! | ATTTTACTTCTCACAGCTTA+TGG | - | chr1.1:66503494-66503513 | MS.gene68087:intron | 30.0% |
| ! | CAAAGTAATAGATTTTTGCG+CGG | + | chr1.1:66503457-66503476 | None:intergenic | 30.0% |
| ! | GGCTTTTATGGTTGTATTTT+AGG | - | chr1.1:66504294-66504313 | MS.gene68087:intron | 30.0% |
| ! | GTTGATAAACTGCGTAAAAT+CGG | - | chr1.1:66503094-66503113 | MS.gene68087:intron | 30.0% |
| ! | TATAATTAACGACGGCTTTT+TGG | + | chr1.1:66504268-66504287 | None:intergenic | 30.0% |
| ! | TCAGTTGGCATATATGTTTT+GGG | - | chr1.1:66504683-66504702 | MS.gene68087:CDS | 30.0% |
| ! | TCTCTGCCATTTATTTAGAT+TGG | - | chr1.1:66502045-66502064 | MS.gene68087:intron | 30.0% |
| ! | TGAAGAAACTTATTTCTCAC+CGG | + | chr1.1:66506976-66506995 | None:intergenic | 30.0% |
| ! | TTCAGTTGGCATATATGTTT+TGG | - | chr1.1:66504682-66504701 | MS.gene68087:CDS | 30.0% |
| ! | TTTTACTTCTCACAGCTTAT+GGG | - | chr1.1:66503495-66503514 | MS.gene68087:intron | 30.0% |
| !! | AGAATACTGAAGAAAGTGTT+AGG | + | chr1.1:66502529-66502548 | None:intergenic | 30.0% |
| !! | TCTGAAATGCAAATTTTGTC+TGG | + | chr1.1:66506833-66506852 | None:intergenic | 30.0% |
| !! | TTCTAGAGTAGAATTCATTC+TGG | + | chr1.1:66501674-66501693 | None:intergenic | 30.0% |
| !!! | AAAAACTCAGAAGCATTTTG+GGG | - | chr1.1:66502628-66502647 | MS.gene68087:CDS | 30.0% |
| !!! | ACAGTTTGTTTTGTTTCAGT+TGG | - | chr1.1:66504668-66504687 | MS.gene68087:CDS | 30.0% |
| !!! | ATGTTGGTTTTCAATTTTGG+AGG | + | chr1.1:66501851-66501870 | None:intergenic | 30.0% |
| !!! | CAAAAAACTCAGAAGCATTT+TGG | - | chr1.1:66502626-66502645 | MS.gene68087:CDS | 30.0% |
| !!! | CACATGTTTTTTTTACCATC+TGG | - | chr1.1:66507271-66507290 | MS.gene68087:intron | 30.0% |
| !!! | CACTTTTTCACATTATATCG+TGG | - | chr1.1:66503714-66503733 | MS.gene68087:intron | 30.0% |
| !!! | GCTAAACAGTTTTGACTTAT+AGG | - | chr1.1:66502900-66502919 | MS.gene68087:intron | 30.0% |
| !!! | GCTTCTGAGTTTTTTGTTTT+TGG | + | chr1.1:66502622-66502641 | None:intergenic | 30.0% |
| !!! | GTTTGGTTTTAGTGTATGTT+CGG | - | chr1.1:66501508-66501527 | MS.gene68087:CDS | 30.0% |
| !!! | TGTTGGTTTTCAATTTTGGA+GGG | + | chr1.1:66501850-66501869 | None:intergenic | 30.0% |
| !!! | TTTTGAAACGTTGCACATTT+TGG | - | chr1.1:66502133-66502152 | MS.gene68087:intron | 30.0% |
| AAAGAAAGCTAGCTAGAAGT+AGG | - | chr1.1:66502184-66502203 | MS.gene68087:CDS | 35.0% | |
| AAAGGCTACTAAGCATATGT+TGG | + | chr1.1:66501867-66501886 | None:intergenic | 35.0% | |
| AACTCAAAGTTTGAGCTTTG+TGG | - | chr1.1:66504462-66504481 | MS.gene68087:intron | 35.0% | |
| AATAACATGACAGAAGCCAT+GGG | - | chr1.1:66502394-66502413 | MS.gene68087:intron | 35.0% | |
| AATCAGAAACTGTCTATGCA+AGG | + | chr1.1:66503550-66503569 | None:intergenic | 35.0% | |
| AATGTGAGCAATATATGCTG+TGG | + | chr1.1:66507196-66507215 | None:intergenic | 35.0% | |
| ACAAAGATAGATAGCATACC+AGG | + | chr1.1:66501243-66501262 | None:intergenic | 35.0% | |
| ACATATATACATTGCACTGC+TGG | - | chr1.1:66503831-66503850 | MS.gene68087:CDS | 35.0% | |
| AGAGAAGAAGAAGAAGAAGA+TGG | + | chr1.1:66501217-66501236 | None:intergenic | 35.0% | |
| AGTTTCTGATTTCGTAGTAC+CGG | - | chr1.1:66503559-66503578 | MS.gene68087:intron | 35.0% | |
| ATAGAAAAACAAATCCAGGG+AGG | + | chr1.1:66506596-66506615 | None:intergenic | 35.0% | |
| ATATCTCATGCTCTTTGAAC+AGG | - | chr1.1:66507364-66507383 | MS.gene68087:CDS | 35.0% | |
| ATATGCTGTGGTACATTGTA+TGG | + | chr1.1:66507184-66507203 | None:intergenic | 35.0% | |
| ATGATAGAGAATAACGAACC+TGG | + | chr1.1:66501060-66501079 | None:intergenic | 35.0% | |
| ATGGAAGAAAGATATTGTGG+TGG | + | chr1.1:66501198-66501217 | None:intergenic | 35.0% | |
| ATTATAGCACACAATAGCAG+TGG | - | chr1.1:66504174-66504193 | MS.gene68087:intron | 35.0% | |
| ATTATATCGTGGATGTTGCA+GGG | - | chr1.1:66503725-66503744 | MS.gene68087:intron | 35.0% | |
| CAAAGATAGATAGCATACCA+GGG | + | chr1.1:66501242-66501261 | None:intergenic | 35.0% | |
| CATATTCAATGTACCAGGAA+GGG | - | chr1.1:66506994-66507013 | MS.gene68087:intron | 35.0% | |
| CTCAAATTTGGACTAACTGA+TGG | - | chr1.1:66502806-66502825 | MS.gene68087:intron | 35.0% | |
| CTTTGGTACTTAAAGCTTAC+AGG | - | chr1.1:66505828-66505847 | MS.gene68087:intron | 35.0% | |
| GAGTACAAGTACATTGTTGA+TGG | - | chr1.1:66507023-66507042 | MS.gene68087:intron | 35.0% | |
| GCCGTCGTTAATTATACATT+AGG | - | chr1.1:66504272-66504291 | MS.gene68087:intron | 35.0% | |
| TAAATGCCATGCAATATCTC+AGG | + | chr1.1:66505669-66505688 | None:intergenic | 35.0% | |
| TAATAACATGACAGAAGCCA+TGG | - | chr1.1:66502393-66502412 | MS.gene68087:intron | 35.0% | |
| TAGAAAAACAAATCCAGGGA+GGG | + | chr1.1:66506595-66506614 | None:intergenic | 35.0% | |
| TATACTGTGACTTCTAATGC+TGG | - | chr1.1:66505436-66505455 | MS.gene68087:CDS | 35.0% | |
| TCAGGGTTATAAACTCAATG+AGG | - | chr1.1:66504707-66504726 | MS.gene68087:CDS | 35.0% | |
| TCATATTCAATGTACCAGGA+AGG | - | chr1.1:66506993-66507012 | MS.gene68087:intron | 35.0% | |
| TGAAACAAAAAGAAACCTGC+AGG | + | chr1.1:66502982-66503001 | None:intergenic | 35.0% | |
| TGAAGTTACCTTAAGTAGCA+TGG | + | chr1.1:66501375-66501394 | None:intergenic | 35.0% | |
| TGATAGAGAATAACGAACCT+GGG | + | chr1.1:66501059-66501078 | None:intergenic | 35.0% | |
| TGCAACTATCAATGCTACAA+CGG | - | chr1.1:66504940-66504959 | MS.gene68087:intron | 35.0% | |
| TGTGTGGAATTGTAAAACAG+AGG | + | chr1.1:66501149-66501168 | None:intergenic | 35.0% | |
| TTACTAGTTAATGGGGATGA+TGG | + | chr1.1:66506041-66506060 | None:intergenic | 35.0% | |
| TTATCGGGTTTAGATTGACT+AGG | - | chr1.1:66503416-66503435 | MS.gene68087:intron | 35.0% | |
| TTCAGGACTTGATATTGGAT+GGG | - | chr1.1:66505911-66505930 | MS.gene68087:intron | 35.0% | |
| TTCTACTTCATGTGTTCTCT+GGG | - | chr1.1:66502266-66502285 | MS.gene68087:intron | 35.0% | |
| TTGACATGGCCATCTTTATT+GGG | + | chr1.1:66507086-66507105 | None:intergenic | 35.0% | |
| TTTCAGGACTTGATATTGGA+TGG | - | chr1.1:66505910-66505929 | MS.gene68087:intron | 35.0% | |
| ! | AGTACATTGTTGATGGAGAA+TGG | - | chr1.1:66507030-66507049 | MS.gene68087:intron | 35.0% |
| ! | CAGCTGAGATCATTTAAAAC+AGG | + | chr1.1:66501970-66501989 | None:intergenic | 35.0% |
| ! | GGGTTCTAATTTCTCTTATG+AGG | + | chr1.1:66502216-66502235 | None:intergenic | 35.0% |
| ! | TGATTGACATTTTCTTGTGC+AGG | - | chr1.1:66502294-66502313 | MS.gene68087:intron | 35.0% |
| ! | TTCAAAGAGCATGAGATATG+TGG | + | chr1.1:66507363-66507382 | None:intergenic | 35.0% |
| !! | TTTTGGAAATGTCCACATGT+AGG | - | chr1.1:66506095-66506114 | MS.gene68087:intron | 35.0% |
| !!! | CAGTTTCTTTTGCTATTGGA+GGG | - | chr1.1:66505268-66505287 | MS.gene68087:intron | 35.0% |
| !!! | GCATATATGTTTTGGGTTCA+GGG | - | chr1.1:66504690-66504709 | MS.gene68087:CDS | 35.0% |
| !!! | GGTTACAAAGTTTTCTAGCT+AGG | - | chr1.1:66504596-66504615 | MS.gene68087:intron | 35.0% |
| AAAGTGACAGGCTTCTTACT+AGG | + | chr1.1:66505855-66505874 | None:intergenic | 40.0% | |
| AACTGTTAGACAATGGCCAA+TGG | + | chr1.1:66504654-66504673 | None:intergenic | 40.0% | |
| AAGAGATTGTCTGCAACATC+TGG | + | chr1.1:66505479-66505498 | None:intergenic | 40.0% | |
| AAGAGGTTACTTGAACGAAC+AGG | + | chr1.1:66501466-66501485 | None:intergenic | 40.0% | |
| AAGTGACAGGCTTCTTACTA+GGG | + | chr1.1:66505854-66505873 | None:intergenic | 40.0% | |
| AGCAGCAGAGGATACTTTAA+CGG | + | chr1.1:66504221-66504240 | None:intergenic | 40.0% | |
| AGGCCATGATTCCTATTCAA+AGG | + | chr1.1:66505649-66505668 | None:intergenic | 40.0% | |
| AGTATGTCTATTGAGGTTCG+TGG | - | chr1.1:66504788-66504807 | MS.gene68087:intron | 40.0% | |
| ATAGAGTTCCACGAGTTAGT+TGG | - | chr1.1:66504524-66504543 | MS.gene68087:intron | 40.0% | |
| ATCTACTAAAGCCTCACCAT+AGG | - | chr1.1:66507231-66507250 | MS.gene68087:intron | 40.0% | |
| ATTAAACATACCAGCACCCA+TGG | + | chr1.1:66502413-66502432 | None:intergenic | 40.0% | |
| CAGTTCTGTCACATATAGTC+TGG | - | chr1.1:66503022-66503041 | MS.gene68087:intron | 40.0% | |
| CATGATCCAACAATCAAGTC+CGG | + | chr1.1:66502959-66502978 | None:intergenic | 40.0% | |
| CATTATATCGTGGATGTTGC+AGG | - | chr1.1:66503724-66503743 | MS.gene68087:intron | 40.0% | |
| CCTACGCAATAGATGATTCT+AGG | + | chr1.1:66505556-66505575 | None:intergenic | 40.0% | |
| CCTAGAATCATCTATTGCGT+AGG | - | chr1.1:66505553-66505572 | MS.gene68087:intron | 40.0% | |
| CCTCCAATAGCAAAAGAAAC+TGG | + | chr1.1:66505270-66505289 | None:intergenic | 40.0% | |
| CTTCTACTTCATGTGTTCTC+TGG | - | chr1.1:66502265-66502284 | MS.gene68087:intron | 40.0% | |
| GAAAAACAAAGGCCTACATG+TGG | + | chr1.1:66506110-66506129 | None:intergenic | 40.0% | |
| GAACTACAACTTCATCCTTC+CGG | - | chr1.1:66502937-66502956 | MS.gene68087:intron | 40.0% | |
| GTAACCTCTCCCAATAAAGA+TGG | - | chr1.1:66507074-66507093 | MS.gene68087:intron | 40.0% | |
| GTACTAAAAATCCCTCCCTA+TGG | + | chr1.1:66507250-66507269 | None:intergenic | 40.0% | |
| GTGGAATTGTAAAACAGAGG+AGG | + | chr1.1:66501146-66501165 | None:intergenic | 40.0% | |
| GTTACCTTAAGTAGCATGGT+TGG | + | chr1.1:66501371-66501390 | None:intergenic | 40.0% | |
| GTTGACATGGCCATCTTTAT+TGG | + | chr1.1:66507087-66507106 | None:intergenic | 40.0% | |
| TAACAGACACAAACTCCAGA+TGG | + | chr1.1:66507289-66507308 | None:intergenic | 40.0% | |
| TAGAGTTCCACGAGTTAGTT+GGG | - | chr1.1:66504525-66504544 | MS.gene68087:intron | 40.0% | |
| TCAGGACTTGATATTGGATG+GGG | - | chr1.1:66505912-66505931 | MS.gene68087:intron | 40.0% | |
| TCGGATCCTTCAATACACAT+AGG | + | chr1.1:66501943-66501962 | None:intergenic | 40.0% | |
| TCTACTAAAGCCTCACCATA+GGG | - | chr1.1:66507232-66507251 | MS.gene68087:intron | 40.0% | |
| TCTACTTCATGTGTTCTCTG+GGG | - | chr1.1:66502267-66502286 | MS.gene68087:intron | 40.0% | |
| TGAGGCTAATACACTACTTC+TGG | - | chr1.1:66504725-66504744 | MS.gene68087:CDS | 40.0% | |
| TGCATGACATACAATGGCAT+CGG | + | chr1.1:66503696-66503715 | None:intergenic | 40.0% | |
| TGCTGAGATAAGGTTCGTAA+TGG | - | chr1.1:66503333-66503352 | MS.gene68087:intron | 40.0% | |
| TGTAATGCTGGACATACACA+GGG | - | chr1.1:66501320-66501339 | MS.gene68087:intron | 40.0% | |
| TGTGACAGAACTGAATCATC+AGG | + | chr1.1:66503015-66503034 | None:intergenic | 40.0% | |
| TTCAGAATCTGAATCTTCCC+AGG | - | chr1.1:66501039-66501058 | MS.gene68087:CDS | 40.0% | |
| TTCTTCTTCTTCTCTATCCC+TGG | - | chr1.1:66501222-66501241 | MS.gene68087:intron | 40.0% | |
| TTGTAATGCTGGACATACAC+AGG | - | chr1.1:66501319-66501338 | MS.gene68087:intron | 40.0% | |
| ! | ATGTTTTCGGTGATCTGTCA+TGG | - | chr1.1:66504027-66504046 | MS.gene68087:intron | 40.0% |
| ! | CATTCCAACCATGCTACTTA+AGG | - | chr1.1:66501364-66501383 | MS.gene68087:intron | 40.0% |
| ! | CTCACAGCTTATGGGTTTTT+GGG | - | chr1.1:66503503-66503522 | MS.gene68087:intron | 40.0% |
| ! | CTTTTTATGGCATCCAGCTT+TGG | + | chr1.1:66505362-66505381 | None:intergenic | 40.0% |
| ! | GGACTGATGCTGAATGTTTT+CGG | - | chr1.1:66504014-66504033 | MS.gene68087:intron | 40.0% |
| ! | GGAGATTTAGAGCTTGTTTC+TGG | - | chr1.1:66504347-66504366 | MS.gene68087:intron | 40.0% |
| ! | TCTCACAGCTTATGGGTTTT+TGG | - | chr1.1:66503502-66503521 | MS.gene68087:intron | 40.0% |
| ! | TGACTGAAGTTTTACCCATC+CGG | + | chr1.1:66503581-66503600 | None:intergenic | 40.0% |
| ! | TGTGTTGGCATATTCTCGTA+TGG | + | chr1.1:66503290-66503309 | None:intergenic | 40.0% |
| !! | ATCGGCTGTTGCACTTTTTA+TGG | + | chr1.1:66505375-66505394 | None:intergenic | 40.0% |
| !! | CATTTTGGTGTATGCTAGAG+AGG | - | chr1.1:66502148-66502167 | MS.gene68087:intron | 40.0% |
| !! | CTTGTTTCTGGATCTTGTGT+TGG | - | chr1.1:66504359-66504378 | MS.gene68087:intron | 40.0% |
| !! | TGGCCAGTTTCTTTTGCTAT+TGG | - | chr1.1:66505264-66505283 | MS.gene68087:intron | 40.0% |
| !! | TTAAGGGCACTCTCTGAAAA+GGG | + | chr1.1:66506305-66506324 | None:intergenic | 40.0% |
| !! | TTTAAGGGCACTCTCTGAAA+AGG | + | chr1.1:66506306-66506325 | None:intergenic | 40.0% |
| !!! | CCAGTTTCTTTTGCTATTGG+AGG | - | chr1.1:66505267-66505286 | MS.gene68087:intron | 40.0% |
| !!! | GGCATATATGTTTTGGGTTC+AGG | - | chr1.1:66504689-66504708 | MS.gene68087:CDS | 40.0% |
| !!! | GTAGGCCTTTGTTTTTCTGT+TGG | - | chr1.1:66506113-66506132 | MS.gene68087:intron | 40.0% |
| AAAAATCCCTCCCTATGGTG+AGG | + | chr1.1:66507245-66507264 | None:intergenic | 45.0% | |
| AACAAATCCAGGGAGGGAAA+AGG | + | chr1.1:66506589-66506608 | None:intergenic | 45.0% | |
| AACACTTGCGTGCTGAGATA+AGG | - | chr1.1:66503323-66503342 | MS.gene68087:intron | 45.0% | |
| ATACATTGCACTGCTGGACT+TGG | - | chr1.1:66503837-66503856 | MS.gene68087:CDS | 45.0% | |
| ATCCAACAATCAAGTCCGGA+AGG | + | chr1.1:66502955-66502974 | None:intergenic | 45.0% | |
| ATCCTTCCGGACTTGATTGT+TGG | - | chr1.1:66502950-66502969 | MS.gene68087:intron | 45.0% | |
| ATGGCCATCTTTATTGGGAG+AGG | + | chr1.1:66507081-66507100 | None:intergenic | 45.0% | |
| ATTCCCGCTACACTGAAACA+CGG | + | chr1.1:66504244-66504263 | None:intergenic | 45.0% | |
| CAGGACTTGATATTGGATGG+GGG | - | chr1.1:66505913-66505932 | MS.gene68087:intron | 45.0% | |
| CGCAGTTTATCAACGTCTTC+AGG | + | chr1.1:66503088-66503107 | None:intergenic | 45.0% | |
| GAATCAGCACTAAGCAGCAA+TGG | + | chr1.1:66501101-66501120 | None:intergenic | 45.0% | |
| GGGTTCATGGTTTCTCAAGA+AGG | - | chr1.1:66506341-66506360 | MS.gene68087:intron | 45.0% | |
| TATCAACGTCTTCAGGAGTC+TGG | + | chr1.1:66503081-66503100 | None:intergenic | 45.0% | |
| TCATGGCCTGAGATATTGCA+TGG | - | chr1.1:66505660-66505679 | MS.gene68087:intron | 45.0% | |
| TCGATGACAAACAGGGTTCA+TGG | - | chr1.1:66506328-66506347 | MS.gene68087:intron | 45.0% | |
| TGATGATCCTGATCTCACGA+AGG | - | chr1.1:66507439-66507458 | MS.gene68087:intron | 45.0% | |
| TGCTCTACGGTGGAAATTTC+AGG | - | chr1.1:66505894-66505913 | MS.gene68087:intron | 45.0% | |
| TGTTCATCCTTCGTGAGATC+AGG | + | chr1.1:66507449-66507468 | None:intergenic | 45.0% | |
| TTTCCACCGTAGAGCAATTG+CGG | + | chr1.1:66505890-66505909 | None:intergenic | 45.0% | |
| ! | CTGATTTCGTAGTACCGGAT+GGG | - | chr1.1:66503564-66503583 | MS.gene68087:intron | 45.0% |
| ! | TCTGATTTCGTAGTACCGGA+TGG | - | chr1.1:66503563-66503582 | MS.gene68087:intron | 45.0% |
| !! | TGAACAGGTCCTTGATGATG+CGG | - | chr1.1:66507379-66507398 | MS.gene68087:CDS | 45.0% |
| !! | TTATATATAAATAATATGTT+TGG | - | chr1.1:66501491-66501510 | MS.gene68087:CDS | 5.0% |
| AACTTTGTAACCACGACGCG+TGG | + | chr1.1:66504588-66504607 | None:intergenic | 50.0% | |
| AAGAGACATACCGCAACAGC+TGG | + | chr1.1:66503870-66503889 | None:intergenic | 50.0% | |
| AAGGTCATGCTGTCCAAAGC+TGG | - | chr1.1:66505346-66505365 | MS.gene68087:intron | 50.0% | |
| AATCCGACCCAACTAACTCG+TGG | + | chr1.1:66504535-66504554 | None:intergenic | 50.0% | |
| ACACAATAGCAGTGGAGAGG+AGG | - | chr1.1:66504182-66504201 | MS.gene68087:intron | 50.0% | |
| ACTAAAGCCTCACCATAGGG+AGG | - | chr1.1:66507235-66507254 | MS.gene68087:intron | 50.0% | |
| ACTTGATATTGGATGGGGGC+AGG | - | chr1.1:66505917-66505936 | MS.gene68087:intron | 50.0% | |
| AGCACACAATAGCAGTGGAG+AGG | - | chr1.1:66504179-66504198 | MS.gene68087:intron | 50.0% | |
| AGCTGTTGCGGTATGTCTCT+TGG | - | chr1.1:66503869-66503888 | MS.gene68087:intron | 50.0% | |
| CACAATAGCAGTGGAGAGGA+GGG | - | chr1.1:66504183-66504202 | MS.gene68087:intron | 50.0% | |
| CGGTGATCTGTCATGGTGAA+TGG | - | chr1.1:66504034-66504053 | MS.gene68087:intron | 50.0% | |
| CTAAAGCCTCACCATAGGGA+GGG | - | chr1.1:66507236-66507255 | MS.gene68087:intron | 50.0% | |
| GAGCTACTTGTCTCTGCACT+CGG | + | chr1.1:66502337-66502356 | None:intergenic | 50.0% | |
| GATTGTTGGATCATGCCTGC+AGG | - | chr1.1:66502964-66502983 | MS.gene68087:intron | 50.0% | |
| GTTCCACGAGTTAGTTGGGT+CGG | - | chr1.1:66504529-66504548 | MS.gene68087:intron | 50.0% | |
| TCTGGAAGCTCTTCCCAATG+AGG | - | chr1.1:66507487-66507506 | MS.gene68087:CDS | 50.0% | |
| TGATCTACGAAAGCGGCTTC+CGG | - | chr1.1:66503761-66503780 | MS.gene68087:intron | 50.0% | |
| TGCTCCGTGTTTCAGTGTAG+CGG | - | chr1.1:66504237-66504256 | MS.gene68087:intron | 50.0% | |
| TTTCTTGTGCAGGCTGCTTC+TGG | - | chr1.1:66502304-66502323 | MS.gene68087:intron | 50.0% | |
| ! | AAGATATTGTGGTGGCGAGC+AGG | + | chr1.1:66501190-66501209 | None:intergenic | 50.0% |
| !! | AAGCCTGTCACTTTGTCGTG+GGG | - | chr1.1:66505861-66505880 | MS.gene68087:intron | 50.0% |
| !! | AAGTAGCTCTGATGTCGAGG+AGG | - | chr1.1:66502348-66502367 | MS.gene68087:intron | 50.0% |
| !! | AGAAGCCTGTCACTTTGTCG+TGG | - | chr1.1:66505859-66505878 | MS.gene68087:intron | 50.0% |
| !! | GAAGCCTGTCACTTTGTCGT+GGG | - | chr1.1:66505860-66505879 | MS.gene68087:intron | 50.0% |
| !! | GACAAGTAGCTCTGATGTCG+AGG | - | chr1.1:66502345-66502364 | MS.gene68087:intron | 50.0% |
| ACACCGCAATTGCTCTACGG+TGG | - | chr1.1:66505884-66505903 | MS.gene68087:intron | 55.0% | |
| ACCAGTCACTCTCTCCCGAA+GGG | + | chr1.1:66507420-66507439 | None:intergenic | 55.0% | |
| ACTGAAACACGGAGCAGCAG+AGG | + | chr1.1:66504233-66504252 | None:intergenic | 55.0% | |
| ATGACAGAAGCCATGGGTGC+TGG | - | chr1.1:66502400-66502419 | MS.gene68087:intron | 55.0% | |
| CAACGTCTTCAGGAGTCTGG+TGG | + | chr1.1:66503078-66503097 | None:intergenic | 55.0% | |
| GAGGAGGAGCAGATAGTGTG+TGG | + | chr1.1:66501165-66501184 | None:intergenic | 55.0% | |
| GCTCCGTGTTTCAGTGTAGC+GGG | - | chr1.1:66504238-66504257 | MS.gene68087:intron | 55.0% | |
| GGGACACCGCAATTGCTCTA+CGG | - | chr1.1:66505881-66505900 | MS.gene68087:intron | 55.0% | |
| TGGAAGAGCTCCAGCTGTTG+CGG | - | chr1.1:66503857-66503876 | MS.gene68087:intron | 55.0% | |
| TGTCCCCACGACAAAGTGAC+AGG | + | chr1.1:66505867-66505886 | None:intergenic | 55.0% | |
| ! | TTCGCTTCCTTTTCCCTCCC+TGG | - | chr1.1:66506579-66506598 | MS.gene68087:intron | 55.0% |
| !! | GTCCTTGATGATGCGGACAG+TGG | - | chr1.1:66507386-66507405 | MS.gene68087:CDS | 55.0% |
| !! | TAGCTCTGATGTCGAGGAGG+AGG | - | chr1.1:66502351-66502370 | MS.gene68087:intron | 55.0% |
| AGTCACTCTCTCCCGAAGGG+AGG | + | chr1.1:66507417-66507436 | None:intergenic | 60.0% | |
| CACCAGTCACTCTCTCCCGA+AGG | + | chr1.1:66507421-66507440 | None:intergenic | 60.0% | |
| GGCCACTGTCCGCATCATCA+AGG | + | chr1.1:66507391-66507410 | None:intergenic | 60.0% | |
| TCCCTTCGGGAGAGAGTGAC+TGG | - | chr1.1:66507416-66507435 | MS.gene68087:intron | 60.0% | |
| TGTACTCGTAGCGCCCTTCC+TGG | + | chr1.1:66507010-66507029 | None:intergenic | 60.0% | |
| ! | TTGTGGTGGCGAGCAGGAAG+AGG | + | chr1.1:66501184-66501203 | None:intergenic | 60.0% |
| ACAGTGGCCGTGCCTCCCTT+CGG | - | chr1.1:66507402-66507421 | MS.gene68087:intron | 65.0% | |
| CAGTGGAGAGGAGGGAGCTG+AGG | - | chr1.1:66504191-66504210 | MS.gene68087:intron | 65.0% | |
| CTCTCTCCCGAAGGGAGGCA+CGG | + | chr1.1:66507412-66507431 | None:intergenic | 65.0% | |
| GGAGAGGAGGGAGCTGAGGA+TGG | - | chr1.1:66504195-66504214 | MS.gene68087:intron | 65.0% | |
| ! | TGGTGGCGAGCAGGAAGAGG+AGG | + | chr1.1:66501181-66501200 | None:intergenic | 65.0% |
| CAGTGGCCGTGCCTCCCTTC+GGG | - | chr1.1:66507403-66507422 | MS.gene68087:intron | 70.0% | |
| CGCACGCATACCACGCGTCG+TGG | - | chr1.1:66504575-66504594 | MS.gene68087:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 66501029 | 66507517 | 66501029 | ID=MS.gene68087 |
| chr1.1 | mRNA | 66501029 | 66507517 | 66501029 | ID=MS.gene68087.t1;Parent=MS.gene68087 |
| chr1.1 | exon | 66507486 | 66507517 | 66507486 | ID=MS.gene68087.t1.exon1;Parent=MS.gene68087.t1 |
| chr1.1 | CDS | 66507486 | 66507517 | 66507486 | ID=cds.MS.gene68087.t1;Parent=MS.gene68087.t1 |
| chr1.1 | exon | 66507303 | 66507405 | 66507303 | ID=MS.gene68087.t1.exon2;Parent=MS.gene68087.t1 |
| chr1.1 | CDS | 66507303 | 66507405 | 66507303 | ID=cds.MS.gene68087.t1;Parent=MS.gene68087.t1 |
| chr1.1 | exon | 66507161 | 66507205 | 66507161 | ID=MS.gene68087.t1.exon3;Parent=MS.gene68087.t1 |
| chr1.1 | CDS | 66507161 | 66507205 | 66507161 | ID=cds.MS.gene68087.t1;Parent=MS.gene68087.t1 |
| chr1.1 | exon | 66506125 | 66506230 | 66506125 | ID=MS.gene68087.t1.exon4;Parent=MS.gene68087.t1 |
| chr1.1 | CDS | 66506125 | 66506230 | 66506125 | ID=cds.MS.gene68087.t1;Parent=MS.gene68087.t1 |
| chr1.1 | exon | 66505561 | 66505637 | 66505561 | ID=MS.gene68087.t1.exon5;Parent=MS.gene68087.t1 |
| chr1.1 | CDS | 66505561 | 66505637 | 66505561 | ID=cds.MS.gene68087.t1;Parent=MS.gene68087.t1 |
| chr1.1 | exon | 66505388 | 66505464 | 66505388 | ID=MS.gene68087.t1.exon6;Parent=MS.gene68087.t1 |
| chr1.1 | CDS | 66505388 | 66505464 | 66505388 | ID=cds.MS.gene68087.t1;Parent=MS.gene68087.t1 |
| chr1.1 | exon | 66505202 | 66505282 | 66505202 | ID=MS.gene68087.t1.exon7;Parent=MS.gene68087.t1 |
| chr1.1 | CDS | 66505202 | 66505282 | 66505202 | ID=cds.MS.gene68087.t1;Parent=MS.gene68087.t1 |
| chr1.1 | exon | 66504668 | 66504800 | 66504668 | ID=MS.gene68087.t1.exon8;Parent=MS.gene68087.t1 |
| chr1.1 | CDS | 66504668 | 66504800 | 66504668 | ID=cds.MS.gene68087.t1;Parent=MS.gene68087.t1 |
| chr1.1 | exon | 66503800 | 66503859 | 66503800 | ID=MS.gene68087.t1.exon9;Parent=MS.gene68087.t1 |
| chr1.1 | CDS | 66503800 | 66503859 | 66503800 | ID=cds.MS.gene68087.t1;Parent=MS.gene68087.t1 |
| chr1.1 | exon | 66503149 | 66503205 | 66503149 | ID=MS.gene68087.t1.exon10;Parent=MS.gene68087.t1 |
| chr1.1 | CDS | 66503149 | 66503205 | 66503149 | ID=cds.MS.gene68087.t1;Parent=MS.gene68087.t1 |
| chr1.1 | exon | 66502608 | 66502703 | 66502608 | ID=MS.gene68087.t1.exon11;Parent=MS.gene68087.t1 |
| chr1.1 | CDS | 66502608 | 66502703 | 66502608 | ID=cds.MS.gene68087.t1;Parent=MS.gene68087.t1 |
| chr1.1 | exon | 66502175 | 66502234 | 66502175 | ID=MS.gene68087.t1.exon12;Parent=MS.gene68087.t1 |
| chr1.1 | CDS | 66502175 | 66502234 | 66502175 | ID=cds.MS.gene68087.t1;Parent=MS.gene68087.t1 |
| chr1.1 | exon | 66501428 | 66501535 | 66501428 | ID=MS.gene68087.t1.exon13;Parent=MS.gene68087.t1 |
| chr1.1 | CDS | 66501428 | 66501535 | 66501428 | ID=cds.MS.gene68087.t1;Parent=MS.gene68087.t1 |
| chr1.1 | exon | 66501029 | 66501160 | 66501029 | ID=MS.gene68087.t1.exon14;Parent=MS.gene68087.t1 |
| chr1.1 | CDS | 66501029 | 66501160 | 66501029 | ID=cds.MS.gene68087.t1;Parent=MS.gene68087.t1 |
| Gene Sequence |
| Protein sequence |
