Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68144.t1 | XP_003604043.1 | 98.7 | 156 | 2 | 0 | 1 | 156 | 1 | 156 | 1.70E-83 | 318.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68144.t1 | Q9SZN7 | 76.3 | 156 | 34 | 1 | 1 | 156 | 1 | 153 | 1.8e-62 | 240.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68144.t1 | G7J8I5 | 98.7 | 156 | 2 | 0 | 1 | 156 | 1 | 156 | 1.2e-83 | 318.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049861 | MS.gene68144 | 0.816242 | 6.12E-52 | -1.69E-46 |
| MS.gene052818 | MS.gene68144 | -0.823679 | 1.22E-53 | -1.69E-46 |
| MS.gene053298 | MS.gene68144 | 0.803565 | 3.28E-49 | -1.69E-46 |
| MS.gene053963 | MS.gene68144 | 0.808357 | 3.22E-50 | -1.69E-46 |
| MS.gene054222 | MS.gene68144 | 0.827913 | 1.20E-54 | -1.69E-46 |
| MS.gene055555 | MS.gene68144 | 0.80524 | 1.47E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68144.t1 | MTR_3g117890 | 98.718 | 156 | 2 | 0 | 1 | 156 | 1 | 156 | 3.13e-116 | 325 |
| MS.gene68144.t1 | MTR_4g073040 | 79.245 | 159 | 27 | 3 | 1 | 156 | 1 | 156 | 2.15e-88 | 254 |
| MS.gene68144.t1 | MTR_5g022620 | 61.491 | 161 | 53 | 3 | 1 | 156 | 1 | 157 | 9.79e-66 | 197 |
| MS.gene68144.t1 | MTR_1g030630 | 53.205 | 156 | 64 | 3 | 1 | 156 | 1 | 147 | 1.57e-53 | 166 |
| MS.gene68144.t1 | MTR_8g091420 | 51.613 | 155 | 69 | 3 | 2 | 156 | 5 | 153 | 5.32e-49 | 155 |
| MS.gene68144.t1 | MTR_3g087770 | 51.923 | 156 | 66 | 4 | 2 | 156 | 5 | 152 | 6.21e-49 | 155 |
| MS.gene68144.t1 | MTR_5g025150 | 47.436 | 156 | 71 | 3 | 1 | 156 | 1 | 145 | 1.55e-45 | 146 |
| MS.gene68144.t1 | MTR_6g003990 | 45.062 | 162 | 76 | 3 | 1 | 156 | 1 | 155 | 6.60e-45 | 145 |
| MS.gene68144.t1 | MTR_7g083060 | 48.077 | 156 | 71 | 3 | 1 | 156 | 1 | 146 | 7.60e-45 | 144 |
| MS.gene68144.t1 | MTR_3g073670 | 47.742 | 155 | 71 | 3 | 2 | 156 | 5 | 149 | 2.79e-42 | 138 |
| MS.gene68144.t1 | MTR_6g003990 | 46.341 | 123 | 61 | 1 | 34 | 156 | 1 | 118 | 3.75e-36 | 121 |
| MS.gene68144.t1 | MTR_5g055020 | 37.821 | 156 | 88 | 3 | 1 | 156 | 1 | 147 | 1.18e-34 | 118 |
| MS.gene68144.t1 | MTR_1g078090 | 38.686 | 137 | 76 | 4 | 25 | 156 | 52 | 185 | 2.78e-24 | 93.2 |
| MS.gene68144.t1 | MTR_6g026890 | 36.029 | 136 | 81 | 4 | 25 | 156 | 15 | 148 | 3.96e-23 | 89.4 |
| MS.gene68144.t1 | MTR_2g091235 | 36.429 | 140 | 77 | 3 | 28 | 156 | 4 | 142 | 4.13e-22 | 86.3 |
| MS.gene68144.t1 | MTR_6g045203 | 36.364 | 143 | 70 | 6 | 28 | 156 | 5 | 140 | 4.91e-18 | 75.9 |
| MS.gene68144.t1 | MTR_7g013660 | 48.485 | 66 | 33 | 1 | 26 | 91 | 4 | 68 | 3.82e-14 | 65.5 |
| MS.gene68144.t1 | MTR_3g435930 | 34.586 | 133 | 74 | 3 | 26 | 156 | 116 | 237 | 4.13e-14 | 67.4 |
| MS.gene68144.t1 | MTR_1g083310 | 36.765 | 68 | 43 | 0 | 25 | 92 | 14 | 81 | 2.49e-12 | 63.5 |
| MS.gene68144.t1 | MTR_1g092670 | 45.455 | 66 | 35 | 1 | 26 | 91 | 4 | 68 | 4.46e-12 | 58.9 |
| MS.gene68144.t1 | MTR_7g108560 | 36.765 | 68 | 42 | 1 | 24 | 91 | 20 | 86 | 6.94e-12 | 62.0 |
| MS.gene68144.t1 | MTR_7g113110 | 42.857 | 63 | 35 | 1 | 30 | 92 | 37 | 98 | 9.96e-12 | 62.0 |
| MS.gene68144.t1 | MTR_3g010130 | 55.769 | 52 | 21 | 2 | 1 | 52 | 1 | 50 | 2.47e-11 | 56.6 |
| MS.gene68144.t1 | MTR_1g107565 | 39.706 | 68 | 40 | 1 | 24 | 91 | 11 | 77 | 3.63e-11 | 60.5 |
| MS.gene68144.t1 | MTR_3g067750 | 41.538 | 65 | 37 | 1 | 26 | 90 | 12 | 75 | 4.83e-11 | 58.9 |
| MS.gene68144.t1 | MTR_7g100450 | 46.269 | 67 | 34 | 1 | 26 | 92 | 209 | 273 | 8.33e-11 | 58.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68144.t1 | AT4G38580 | 76.282 | 156 | 34 | 1 | 1 | 156 | 1 | 153 | 1.07e-84 | 245 |
| MS.gene68144.t1 | AT4G38580 | 76.282 | 156 | 34 | 1 | 1 | 156 | 1 | 153 | 1.07e-84 | 245 |
| MS.gene68144.t1 | AT4G35060 | 70.701 | 157 | 41 | 3 | 1 | 156 | 1 | 153 | 1.82e-76 | 224 |
| MS.gene68144.t1 | AT5G66110 | 66.667 | 138 | 44 | 1 | 19 | 156 | 12 | 147 | 2.10e-66 | 199 |
| MS.gene68144.t1 | AT5G66110 | 66.667 | 138 | 44 | 1 | 19 | 156 | 12 | 147 | 2.10e-66 | 199 |
| MS.gene68144.t1 | AT5G66110 | 65.854 | 123 | 40 | 1 | 34 | 156 | 1 | 121 | 1.43e-58 | 178 |
| MS.gene68144.t1 | AT1G71050 | 56.329 | 158 | 61 | 4 | 1 | 156 | 1 | 152 | 9.28e-54 | 167 |
| MS.gene68144.t1 | AT1G22990 | 49.057 | 159 | 71 | 2 | 1 | 156 | 1 | 152 | 1.93e-50 | 159 |
| MS.gene68144.t1 | AT1G22990 | 46.795 | 156 | 74 | 2 | 1 | 156 | 1 | 147 | 2.26e-47 | 150 |
| MS.gene68144.t1 | AT4G39700 | 48.734 | 158 | 74 | 4 | 2 | 156 | 5 | 158 | 1.20e-44 | 144 |
| MS.gene68144.t1 | AT5G17450 | 45.860 | 157 | 76 | 3 | 1 | 156 | 1 | 149 | 1.42e-42 | 139 |
| MS.gene68144.t1 | AT4G08570 | 44.231 | 156 | 76 | 4 | 2 | 156 | 5 | 150 | 3.17e-40 | 132 |
| MS.gene68144.t1 | AT5G17450 | 43.396 | 106 | 51 | 3 | 52 | 156 | 8 | 105 | 1.46e-25 | 94.4 |
| MS.gene68144.t1 | AT1G06330 | 38.000 | 150 | 71 | 6 | 27 | 156 | 3 | 150 | 4.74e-24 | 91.7 |
| MS.gene68144.t1 | AT2G18196 | 33.824 | 136 | 84 | 4 | 25 | 156 | 45 | 178 | 3.93e-20 | 82.4 |
| MS.gene68144.t1 | AT4G10465 | 33.566 | 143 | 89 | 3 | 18 | 156 | 43 | 183 | 1.75e-19 | 80.9 |
| MS.gene68144.t1 | AT3G56891 | 32.544 | 169 | 89 | 6 | 10 | 156 | 1 | 166 | 1.52e-18 | 77.8 |
| MS.gene68144.t1 | AT2G18196 | 33.071 | 127 | 79 | 4 | 34 | 156 | 1 | 125 | 2.30e-16 | 71.2 |
| MS.gene68144.t1 | AT3G56891 | 33.103 | 145 | 73 | 5 | 34 | 156 | 1 | 143 | 3.59e-16 | 71.2 |
| MS.gene68144.t1 | AT1G29100 | 33.974 | 156 | 65 | 4 | 27 | 156 | 4 | 147 | 1.23e-15 | 69.7 |
| MS.gene68144.t1 | AT1G29100 | 33.333 | 153 | 64 | 4 | 30 | 156 | 1 | 141 | 3.22e-14 | 65.9 |
| MS.gene68144.t1 | AT1G56210 | 39.744 | 78 | 46 | 1 | 25 | 102 | 39 | 115 | 8.82e-13 | 65.1 |
| MS.gene68144.t1 | AT1G66240 | 43.939 | 66 | 36 | 1 | 26 | 91 | 33 | 97 | 1.17e-12 | 60.8 |
| MS.gene68144.t1 | AT3G56240 | 47.761 | 67 | 34 | 1 | 26 | 92 | 3 | 68 | 2.13e-12 | 60.8 |
| MS.gene68144.t1 | AT3G56240 | 47.761 | 67 | 34 | 1 | 26 | 92 | 3 | 68 | 2.13e-12 | 60.8 |
| MS.gene68144.t1 | AT3G02960 | 28.571 | 133 | 85 | 2 | 24 | 156 | 124 | 246 | 4.41e-12 | 62.4 |
| MS.gene68144.t1 | AT5G27690 | 39.130 | 69 | 41 | 1 | 24 | 92 | 28 | 95 | 1.70e-11 | 61.2 |
| MS.gene68144.t1 | AT3G06130 | 39.706 | 68 | 40 | 1 | 24 | 91 | 8 | 74 | 4.28e-11 | 60.1 |
Find 47 sgRNAs with CRISPR-Local
Find 51 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAACACCGCAAACAATTTC+AGG | 0.262177 | 3.1:-92733868 | MS.gene68144:intron |
| AGCACACAAGGTCACTGTTC+AGG | 0.319616 | 3.1:-92733663 | MS.gene68144:CDS |
| TCGTACGTACCTTGTGCATA+TGG | 0.340646 | 3.1:+92733542 | None:intergenic |
| TACGACAACAATCAGTATTC+TGG | 0.342642 | 3.1:-92733485 | MS.gene68144:CDS |
| ATACGCGCCACCACTTTGTT+AGG | 0.355486 | 3.1:+92733629 | None:intergenic |
| TCGCTCACCGCACTGGTAAG+AGG | 0.420324 | 3.1:-92733607 | MS.gene68144:CDS |
| CTTTCCTATCAATATCAACT+TGG | 0.425944 | 3.1:+92733684 | None:intergenic |
| GTAGTTGTTTCTAACATAAC+CGG | 0.435319 | 3.1:+92733505 | None:intergenic |
| AAGAGATAATATGGGTGCTC+TGG | 0.436844 | 3.1:-92733934 | None:intergenic |
| GGGTGTGCAACGACGTCGTA+TGG | 0.444075 | 3.1:+92733563 | None:intergenic |
| CTATTACCTGAAATTGTTTG+CGG | 0.461292 | 3.1:+92733862 | None:intergenic |
| GAAATTGTTTGCGGTGTTTG+TGG | 0.465422 | 3.1:+92733871 | None:intergenic |
| ACGACGTCGTATGGAACATA+TGG | 0.471597 | 3.1:+92733572 | None:intergenic |
| TCAGTATTCTGGATCCCATC+TGG | 0.473879 | 3.1:-92733474 | MS.gene68144:CDS |
| TGAACCAAGTTGATATTGAT+AGG | 0.475748 | 3.1:-92733688 | MS.gene68144:CDS |
| AAATTGTTTGCGGTGTTTGT+GGG | 0.476948 | 3.1:+92733872 | None:intergenic |
| GCACACAAGGTCACTGTTCA+GGG | 0.478112 | 3.1:-92733662 | MS.gene68144:CDS |
| TACGACAAGAAAGCACCTTC+CGG | 0.490150 | 3.1:-92733524 | MS.gene68144:CDS |
| ATGATATCACATGACAGAAC+AGG | 0.494670 | 3.1:+92733391 | None:intergenic |
| CTGGTAAGAGGGCTGAGATA+TGG | 0.502117 | 3.1:-92733595 | MS.gene68144:CDS |
| CGTACGTACCTTGTGCATAT+GGG | 0.507821 | 3.1:+92733543 | None:intergenic |
| GTGTTTGTGGGAACTTCCAC+CGG | 0.512215 | 3.1:+92733884 | None:intergenic |
| TGGAACTAGCACGCGCCAGA+TGG | 0.513296 | 3.1:+92733459 | None:intergenic |
| GCGCGTATCGCTCACCGCAC+TGG | 0.514553 | 3.1:-92733614 | MS.gene68144:CDS |
| CGCTCACCGCACTGGTAAGA+GGG | 0.517783 | 3.1:-92733606 | MS.gene68144:CDS |
| TCTGAGCTATTTGACTGCTC+CGG | 0.534149 | 3.1:-92733903 | MS.gene68144:CDS |
| AAAGTGAGAAGGTCGGTGGA+AGG | 0.544215 | 3.1:-92733722 | MS.gene68144:CDS |
| GGTGGAAGTGAAAGTGAAGA+TGG | 0.547212 | 3.1:-92733765 | MS.gene68144:CDS |
| GAGCTATTTGACTGCTCCGG+TGG | 0.554467 | 3.1:-92733900 | MS.gene68144:CDS |
| GGAACTAGCACGCGCCAGAT+GGG | 0.557432 | 3.1:+92733460 | None:intergenic |
| AGGTCGGTGGAAGGAATGAA+AGG | 0.586836 | 3.1:-92733713 | MS.gene68144:CDS |
| GAGAAAAGTGAGAAGGTCGG+TGG | 0.602080 | 3.1:-92733726 | MS.gene68144:CDS |
| AGCGGTGGTGTAGCGAACTT+CGG | 0.605621 | 3.1:+92733436 | None:intergenic |
| TCACATGACAGAACAGGCGG+TGG | 0.625825 | 3.1:+92733397 | None:intergenic |
| CGAGAGAAAAGTGAGAAGGT+CGG | 0.626298 | 3.1:-92733729 | MS.gene68144:CDS |
| TATTGATAGGAAAGCACACA+AGG | 0.639331 | 3.1:-92733675 | MS.gene68144:CDS |
| GATGCGAGAGAAAAGTGAGA+AGG | 0.650873 | 3.1:-92733733 | MS.gene68144:CDS |
| CACATGACAGAACAGGCGGT+GGG | 0.664346 | 3.1:+92733398 | None:intergenic |
| TTGTTTCTAACATAACCGGA+AGG | 0.675813 | 3.1:+92733509 | None:intergenic |
| TGTTGAACCTAACAAAGTGG+TGG | 0.684270 | 3.1:-92733636 | MS.gene68144:CDS |
| CACACAAGGTCACTGTTCAG+GGG | 0.691299 | 3.1:-92733661 | MS.gene68144:CDS |
| GGTGGTGTAGCGAACTTCGG+TGG | 0.699721 | 3.1:+92733439 | None:intergenic |
| ATATCACATGACAGAACAGG+CGG | 0.726418 | 3.1:+92733394 | None:intergenic |
| GTTGCACACCCATATGCACA+AGG | 0.727359 | 3.1:-92733551 | MS.gene68144:CDS |
| GTATGTTGAACCTAACAAAG+TGG | 0.728726 | 3.1:-92733639 | MS.gene68144:CDS |
| TCTCAGCCCTCTTACCAGTG+CGG | 0.734386 | 3.1:+92733600 | None:intergenic |
| AAAGTGAAGATGGACTGCGA+AGG | 0.769260 | 3.1:-92733755 | MS.gene68144:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATATATATATGTACAGA+CGG | - | chr3.1:92733535-92733554 | MS.gene68144:CDS | 15.0% |
| !! | TAACAACATATGAATATGAA+TGG | + | chr3.1:92733497-92733516 | None:intergenic | 20.0% |
| ! | ACATATGAATATGAATGGAA+TGG | + | chr3.1:92733492-92733511 | None:intergenic | 25.0% |
| ATATATATATGTACAGACGG+TGG | - | chr3.1:92733538-92733557 | MS.gene68144:CDS | 30.0% | |
| CTATTACCTGAAATTGTTTG+CGG | + | chr3.1:92733462-92733481 | None:intergenic | 30.0% | |
| CTTTCCTATCAATATCAACT+TGG | + | chr3.1:92733640-92733659 | None:intergenic | 30.0% | |
| TGAATATGAATGGAATGGAA+TGG | + | chr3.1:92733487-92733506 | None:intergenic | 30.0% | |
| !! | GTAGTTGTTTCTAACATAAC+CGG | + | chr3.1:92733819-92733838 | None:intergenic | 30.0% |
| !! | TGAACCAAGTTGATATTGAT+AGG | - | chr3.1:92733633-92733652 | MS.gene68144:CDS | 30.0% |
| AAATTGTTTGCGGTGTTTGT+GGG | + | chr3.1:92733452-92733471 | None:intergenic | 35.0% | |
| GTATGTTGAACCTAACAAAG+TGG | - | chr3.1:92733682-92733701 | MS.gene68144:CDS | 35.0% | |
| TACGACAACAATCAGTATTC+TGG | - | chr3.1:92733836-92733855 | MS.gene68144:intron | 35.0% | |
| ! | TATTGATAGGAAAGCACACA+AGG | - | chr3.1:92733646-92733665 | MS.gene68144:CDS | 35.0% |
| !! | TTGTTTCTAACATAACCGGA+AGG | + | chr3.1:92733815-92733834 | None:intergenic | 35.0% |
| CAAACACCGCAAACAATTTC+AGG | - | chr3.1:92733453-92733472 | MS.gene68144:CDS | 40.0% | |
| GAAATTGTTTGCGGTGTTTG+TGG | + | chr3.1:92733453-92733472 | None:intergenic | 40.0% | |
| TGTTGAACCTAACAAAGTGG+TGG | - | chr3.1:92733685-92733704 | MS.gene68144:CDS | 40.0% | |
| ACGACGTCGTATGGAACATA+TGG | + | chr3.1:92733752-92733771 | None:intergenic | 45.0% | |
| CGAGAGAAAAGTGAGAAGGT+CGG | - | chr3.1:92733592-92733611 | MS.gene68144:CDS | 45.0% | |
| CGTACGTACCTTGTGCATAT+GGG | + | chr3.1:92733781-92733800 | None:intergenic | 45.0% | |
| GATGCGAGAGAAAAGTGAGA+AGG | - | chr3.1:92733588-92733607 | MS.gene68144:CDS | 45.0% | |
| GGTGGAAGTGAAAGTGAAGA+TGG | - | chr3.1:92733556-92733575 | MS.gene68144:CDS | 45.0% | |
| TCAGTATTCTGGATCCCATC+TGG | - | chr3.1:92733847-92733866 | MS.gene68144:intron | 45.0% | |
| TCGTACGTACCTTGTGCATA+TGG | + | chr3.1:92733782-92733801 | None:intergenic | 45.0% | |
| TCTGAGCTATTTGACTGCTC+CGG | - | chr3.1:92733418-92733437 | MS.gene68144:CDS | 45.0% | |
| !! | AAAGTGAAGATGGACTGCGA+AGG | - | chr3.1:92733566-92733585 | MS.gene68144:CDS | 45.0% |
| !! | TACGACAAGAAAGCACCTTC+CGG | - | chr3.1:92733797-92733816 | MS.gene68144:intron | 45.0% |
| AAAGTGAGAAGGTCGGTGGA+AGG | - | chr3.1:92733599-92733618 | MS.gene68144:CDS | 50.0% | |
| AGCACACAAGGTCACTGTTC+AGG | - | chr3.1:92733658-92733677 | MS.gene68144:CDS | 50.0% | |
| AGGTCGGTGGAAGGAATGAA+AGG | - | chr3.1:92733608-92733627 | MS.gene68144:CDS | 50.0% | |
| ATACGCGCCACCACTTTGTT+AGG | + | chr3.1:92733695-92733714 | None:intergenic | 50.0% | |
| CACACAAGGTCACTGTTCAG+GGG | - | chr3.1:92733660-92733679 | MS.gene68144:CDS | 50.0% | |
| CTGGTAAGAGGGCTGAGATA+TGG | - | chr3.1:92733726-92733745 | MS.gene68144:CDS | 50.0% | |
| GAGAAAAGTGAGAAGGTCGG+TGG | - | chr3.1:92733595-92733614 | MS.gene68144:CDS | 50.0% | |
| GCACACAAGGTCACTGTTCA+GGG | - | chr3.1:92733659-92733678 | MS.gene68144:CDS | 50.0% | |
| GTGTTTGTGGGAACTTCCAC+CGG | + | chr3.1:92733440-92733459 | None:intergenic | 50.0% | |
| GTTGCACACCCATATGCACA+AGG | - | chr3.1:92733770-92733789 | MS.gene68144:CDS | 50.0% | |
| ! | ATTTTCGTCGCTGAAAGCGG+TGG | + | chr3.1:92733903-92733922 | None:intergenic | 50.0% |
| ! | GGGATTTTCGTCGCTGAAAG+CGG | + | chr3.1:92733906-92733925 | None:intergenic | 50.0% |
| AGCGGTGGTGTAGCGAACTT+CGG | + | chr3.1:92733888-92733907 | None:intergenic | 55.0% | |
| CACATGACAGAACAGGCGGT+GGG | + | chr3.1:92733926-92733945 | None:intergenic | 55.0% | |
| GAGCTATTTGACTGCTCCGG+TGG | - | chr3.1:92733421-92733440 | MS.gene68144:CDS | 55.0% | |
| TCACATGACAGAACAGGCGG+TGG | + | chr3.1:92733927-92733946 | None:intergenic | 55.0% | |
| TCTCAGCCCTCTTACCAGTG+CGG | + | chr3.1:92733724-92733743 | None:intergenic | 55.0% | |
| GGAACTAGCACGCGCCAGAT+GGG | + | chr3.1:92733864-92733883 | None:intergenic | 60.0% | |
| GGGTGTGCAACGACGTCGTA+TGG | + | chr3.1:92733761-92733780 | None:intergenic | 60.0% | |
| GGTGGTGTAGCGAACTTCGG+TGG | + | chr3.1:92733885-92733904 | None:intergenic | 60.0% | |
| TGGAACTAGCACGCGCCAGA+TGG | + | chr3.1:92733865-92733884 | None:intergenic | 60.0% | |
| ! | CGCTCACCGCACTGGTAAGA+GGG | - | chr3.1:92733715-92733734 | MS.gene68144:CDS | 60.0% |
| ! | TCGCTCACCGCACTGGTAAG+AGG | - | chr3.1:92733714-92733733 | MS.gene68144:CDS | 60.0% |
| GCGCGTATCGCTCACCGCAC+TGG | - | chr3.1:92733707-92733726 | MS.gene68144:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 92733397 | 92733946 | 92733397 | ID=MS.gene68144 |
| chr3.1 | mRNA | 92733397 | 92733946 | 92733397 | ID=MS.gene68144.t1;Parent=MS.gene68144 |
| chr3.1 | exon | 92733869 | 92733946 | 92733869 | ID=MS.gene68144.t1.exon1;Parent=MS.gene68144.t1 |
| chr3.1 | CDS | 92733869 | 92733946 | 92733869 | ID=cds.MS.gene68144.t1;Parent=MS.gene68144.t1 |
| chr3.1 | exon | 92733397 | 92733789 | 92733397 | ID=MS.gene68144.t1.exon2;Parent=MS.gene68144.t1 |
| chr3.1 | CDS | 92733397 | 92733789 | 92733397 | ID=cds.MS.gene68144.t1;Parent=MS.gene68144.t1 |
| Gene Sequence |
| Protein sequence |
