Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68456.t1 | XP_003591668.1 | 73 | 371 | 13 | 2 | 1 | 286 | 1 | 369 | 1.00E-139 | 506.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68456.t1 | Q9FLE8 | 43.4 | 166 | 74 | 3 | 140 | 285 | 223 | 388 | 2.6e-30 | 134.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68456.t1 | G7I314 | 73.0 | 371 | 13 | 2 | 1 | 286 | 1 | 369 | 7.5e-140 | 506.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050214 | MS.gene68456 | 0.929627 | 5.30E-93 | -1.69E-46 |
| MS.gene050310 | MS.gene68456 | 0.804755 | 1.85E-49 | -1.69E-46 |
| MS.gene051199 | MS.gene68456 | 0.801841 | 7.44E-49 | -1.69E-46 |
| MS.gene055537 | MS.gene68456 | 0.807134 | 5.86E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68456.t1 | MTR_1g090400 | 94.841 | 252 | 11 | 1 | 35 | 286 | 120 | 369 | 2.17e-173 | 484 |
| MS.gene68456.t1 | MTR_7g106500 | 37.778 | 315 | 129 | 9 | 1 | 285 | 1 | 278 | 1.34e-58 | 189 |
| MS.gene68456.t1 | MTR_7g104720 | 44.118 | 204 | 108 | 4 | 84 | 285 | 205 | 404 | 6.12e-49 | 167 |
| MS.gene68456.t1 | MTR_5g083110 | 49.333 | 150 | 74 | 2 | 137 | 285 | 90 | 238 | 9.69e-46 | 154 |
| MS.gene68456.t1 | MTR_8g099665 | 37.768 | 233 | 122 | 6 | 63 | 285 | 148 | 367 | 1.88e-43 | 152 |
| MS.gene68456.t1 | MTR_1g051180 | 44.720 | 161 | 78 | 2 | 136 | 285 | 203 | 363 | 9.32e-42 | 147 |
| MS.gene68456.t1 | MTR_3g017490 | 46.309 | 149 | 78 | 2 | 140 | 286 | 113 | 261 | 1.33e-40 | 142 |
| MS.gene68456.t1 | MTR_8g106900 | 45.963 | 161 | 80 | 3 | 132 | 285 | 113 | 273 | 7.34e-39 | 137 |
| MS.gene68456.t1 | MTR_8g038440 | 45.395 | 152 | 78 | 2 | 139 | 285 | 103 | 254 | 7.56e-39 | 137 |
| MS.gene68456.t1 | MTR_7g090230 | 43.046 | 151 | 83 | 2 | 138 | 285 | 274 | 424 | 4.96e-37 | 136 |
| MS.gene68456.t1 | MTR_5g072400 | 44.966 | 149 | 80 | 2 | 138 | 285 | 106 | 253 | 6.47e-37 | 132 |
| MS.gene68456.t1 | MTR_3g465550 | 44.828 | 145 | 77 | 2 | 138 | 280 | 84 | 227 | 2.01e-36 | 130 |
| MS.gene68456.t1 | MTR_3g071510 | 40.690 | 145 | 84 | 2 | 142 | 285 | 91 | 234 | 2.18e-35 | 127 |
| MS.gene68456.t1 | MTR_7g010090 | 38.288 | 222 | 106 | 6 | 85 | 285 | 220 | 431 | 6.84e-32 | 122 |
| MS.gene68456.t1 | MTR_6g011640 | 30.627 | 271 | 134 | 9 | 55 | 285 | 140 | 396 | 8.38e-28 | 110 |
| MS.gene68456.t1 | MTR_3g030520 | 38.217 | 157 | 77 | 4 | 149 | 285 | 142 | 298 | 7.88e-23 | 95.9 |
| MS.gene68456.t1 | MTR_7g079015 | 38.462 | 104 | 54 | 3 | 182 | 275 | 1 | 104 | 8.53e-12 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68456.t1 | AT5G01420 | 39.055 | 402 | 126 | 12 | 1 | 285 | 1 | 400 | 4.08e-67 | 214 |
| MS.gene68456.t1 | AT5G06470 | 51.235 | 162 | 69 | 2 | 132 | 285 | 79 | 238 | 3.32e-58 | 186 |
| MS.gene68456.t1 | AT3G11773 | 54.286 | 140 | 63 | 1 | 146 | 285 | 11 | 149 | 1.68e-49 | 161 |
| MS.gene68456.t1 | AT4G10630 | 47.619 | 168 | 74 | 3 | 132 | 285 | 166 | 333 | 3.72e-49 | 166 |
| MS.gene68456.t1 | AT5G03870 | 42.544 | 228 | 112 | 5 | 67 | 285 | 166 | 383 | 1.01e-48 | 166 |
| MS.gene68456.t1 | AT1G64500 | 43.787 | 169 | 85 | 3 | 127 | 285 | 197 | 365 | 2.43e-42 | 149 |
| MS.gene68456.t1 | AT5G58530 | 44.025 | 159 | 78 | 3 | 138 | 286 | 109 | 266 | 1.42e-37 | 134 |
| MS.gene68456.t1 | AT5G13810 | 44.667 | 150 | 81 | 2 | 138 | 285 | 123 | 272 | 1.47e-37 | 134 |
| MS.gene68456.t1 | AT3G11773 | 42.675 | 157 | 66 | 2 | 129 | 285 | 67 | 199 | 1.02e-34 | 124 |
| MS.gene68456.t1 | AT3G57070 | 42.763 | 152 | 83 | 2 | 138 | 285 | 264 | 415 | 2.38e-34 | 129 |
| MS.gene68456.t1 | AT2G41330 | 46.207 | 145 | 75 | 2 | 144 | 285 | 256 | 400 | 6.05e-34 | 127 |
| MS.gene68456.t1 | AT1G32760 | 44.706 | 170 | 84 | 4 | 126 | 285 | 144 | 313 | 1.63e-33 | 124 |
| MS.gene68456.t1 | AT5G39865 | 43.373 | 166 | 74 | 3 | 140 | 285 | 223 | 388 | 4.27e-33 | 125 |
| MS.gene68456.t1 | AT3G28850 | 42.135 | 178 | 71 | 5 | 140 | 285 | 249 | 426 | 9.58e-30 | 117 |
Find 57 sgRNAs with CRISPR-Local
Find 83 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGATGCTTGTGGTGGTTTA+AGG | 0.148710 | 1.1:+66024896 | MS.gene68456:CDS |
| TAATGGTAGCCATAAGATTT+TGG | 0.260789 | 1.1:+66024939 | MS.gene68456:CDS |
| TCGAACGCAGCAAGTAGTTT+TGG | 0.302448 | 1.1:-66024433 | None:intergenic |
| GAGCTAATACTGATAGAAAA+AGG | 0.313758 | 1.1:+66024338 | MS.gene68456:CDS |
| ATCAATGCACAAGGAGTATA+AGG | 0.319818 | 1.1:+66024714 | MS.gene68456:CDS |
| TTCTACACAACATCGCTTAG+AGG | 0.320109 | 1.1:+66024610 | MS.gene68456:CDS |
| TTCTCCATCTAGCCACAATA+TGG | 0.324101 | 1.1:-66025021 | None:intergenic |
| GTTCCAATGGATTGTTCTAA+TGG | 0.327957 | 1.1:+66024868 | MS.gene68456:CDS |
| GGATGAACTGTGGAGCCTTT+TGG | 0.348501 | 1.1:+66024735 | MS.gene68456:CDS |
| CGGAGACCGGATTTGAATTC+CGG | 0.349959 | 1.1:+66024397 | MS.gene68456:CDS |
| CTTCAGGTAAAATCCATTGA+TGG | 0.409719 | 1.1:+66023995 | MS.gene68456:CDS |
| TTTGTTAAGGGAAGATATAT+AGG | 0.419790 | 1.1:+66024784 | MS.gene68456:CDS |
| AATGCCAGAACGTATTCTTC+AGG | 0.424308 | 1.1:+66023979 | MS.gene68456:CDS |
| TAGTTTGTCGTTTCGGAGAC+CGG | 0.433762 | 1.1:+66024384 | MS.gene68456:CDS |
| AAAACTACTTGCTGCGTTCG+AGG | 0.434476 | 1.1:+66024435 | MS.gene68456:CDS |
| AGAAGTTGAAGTTGACCCTT+TGG | 0.437150 | 1.1:+66024540 | MS.gene68456:CDS |
| TTTCTATCAGTATTAGCTCT+TGG | 0.445564 | 1.1:-66024334 | None:intergenic |
| GTTTCTTCTACAAAGTTTCA+AGG | 0.449292 | 1.1:+66024669 | MS.gene68456:CDS |
| AGAGTGATAGTTTGTCGTTT+CGG | 0.451538 | 1.1:+66024377 | MS.gene68456:CDS |
| GAAGCTCAAATCAATCAAAC+AGG | 0.457778 | 1.1:+66023946 | MS.gene68456:CDS |
| TTTACCTGAAGAATACGTTC+TGG | 0.475307 | 1.1:-66023983 | None:intergenic |
| TGTTTGTTGTGTAATGAGAA+TGG | 0.484610 | 1.1:+66024985 | MS.gene68456:CDS |
| AAAATCTGCATACCCATCAA+TGG | 0.498345 | 1.1:-66024008 | None:intergenic |
| TGAGGAAGAGTTTACAAAGG+TGG | 0.505075 | 1.1:+66024489 | MS.gene68456:CDS |
| AATTCTTGAAGGGGTTCCAA+TGG | 0.506549 | 1.1:+66024855 | MS.gene68456:CDS |
| GTGTAATGAGAATGGATTGA+TGG | 0.517662 | 1.1:+66024993 | MS.gene68456:CDS |
| AGTTGAAGAAAATTCTTGAA+GGG | 0.524425 | 1.1:+66024845 | MS.gene68456:CDS |
| AAGAAACAGAGTCAAAACAG+AGG | 0.526139 | 1.1:+66024278 | MS.gene68456:CDS |
| AAGTTGAAGAAAATTCTTGA+AGG | 0.526961 | 1.1:+66024844 | MS.gene68456:CDS |
| TTCAGGTAAAATCCATTGAT+GGG | 0.528869 | 1.1:+66023996 | MS.gene68456:CDS |
| GCACAACTTTCTCACCCAAA+AGG | 0.528869 | 1.1:-66024750 | None:intergenic |
| AAGCTACCGGAATTCAAATC+CGG | 0.531010 | 1.1:-66024403 | None:intergenic |
| AAACTATCACTCTCAGAAAG+AGG | 0.531340 | 1.1:-66024367 | None:intergenic |
| GTTGAAGAAAATTCTTGAAG+GGG | 0.541357 | 1.1:+66024846 | MS.gene68456:CDS |
| GTGAGAAAGTTGTGCCTCCA+AGG | 0.543640 | 1.1:+66024758 | MS.gene68456:CDS |
| TCTCTTCAAATAACGCCAAA+GGG | 0.545226 | 1.1:-66024555 | None:intergenic |
| AAGTGTCCACCAGGTGGTGA+TGG | 0.545637 | 1.1:+66024577 | MS.gene68456:CDS |
| TTCTCTTCAAATAACGCCAA+AGG | 0.551664 | 1.1:-66024556 | None:intergenic |
| TGCGTTCGAGGAAGCTGTGA+AGG | 0.562144 | 1.1:+66024447 | MS.gene68456:CDS |
| AATGGACCTTGTGATGCTTG+TGG | 0.579467 | 1.1:+66024886 | MS.gene68456:CDS |
| GGTCCATTAGAACAATCCAT+TGG | 0.585251 | 1.1:-66024871 | None:intergenic |
| TTGATGGTGTGTCCATATTG+TGG | 0.585754 | 1.1:+66025009 | MS.gene68456:CDS |
| GGACCTTGTGATGCTTGTGG+TGG | 0.596799 | 1.1:+66024889 | MS.gene68456:CDS |
| AACAGAGTCAAAACAGAGGG+AGG | 0.601310 | 1.1:+66024282 | MS.gene68456:CDS |
| AACTATCACTCTCAGAAAGA+GGG | 0.607495 | 1.1:-66024366 | None:intergenic |
| AGAAACAGAGTCAAAACAGA+GGG | 0.608171 | 1.1:+66024279 | MS.gene68456:CDS |
| ATCACAGTACCATCACCACC+TGG | 0.624770 | 1.1:-66024586 | None:intergenic |
| TTTGAAGAGAAGTGTCCACC+AGG | 0.629966 | 1.1:+66024568 | MS.gene68456:CDS |
| TTAGCTCTTGGTAACAGTGG+TGG | 0.637058 | 1.1:-66024322 | None:intergenic |
| AGTTGAGGAAGAGTTTACAA+AGG | 0.642245 | 1.1:+66024486 | MS.gene68456:CDS |
| GTATTAGCTCTTGGTAACAG+TGG | 0.650696 | 1.1:-66024325 | None:intergenic |
| AAACCACCACAAGCATCACA+AGG | 0.679920 | 1.1:-66024892 | None:intergenic |
| ACAGTACCATCACCACCTGG+TGG | 0.680584 | 1.1:-66024583 | None:intergenic |
| GAGGGATATATCAATGCACA+AGG | 0.680749 | 1.1:+66024705 | MS.gene68456:CDS |
| AGGAAGCTGTGAAGGAACAG+AGG | 0.688483 | 1.1:+66024455 | MS.gene68456:CDS |
| GAAGAGAAGTGTCCACCAGG+TGG | 0.706764 | 1.1:+66024571 | MS.gene68456:CDS |
| AGGAGTATAAGGATGAACTG+TGG | 0.720579 | 1.1:+66024725 | MS.gene68456:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTGAAAGATGAAATCTT+TGG | - | chr1.1:66024037-66024056 | None:intergenic | 20.0% |
| ! | AAAGAGAATATTAGTCACAA+AGG | + | chr1.1:66024223-66024242 | MS.gene68456:intron | 25.0% |
| ! | AAGTTGAAGAAAATTCTTGA+AGG | + | chr1.1:66024844-66024863 | MS.gene68456:CDS | 25.0% |
| ! | AGTTGAAGAAAATTCTTGAA+GGG | + | chr1.1:66024845-66024864 | MS.gene68456:CDS | 25.0% |
| ! | TCTGATACATCAATAATTTC+TGG | - | chr1.1:66024133-66024152 | None:intergenic | 25.0% |
| ! | TGAAGAAAATGAAGAAGAAA+TGG | + | chr1.1:66024168-66024187 | MS.gene68456:intron | 25.0% |
| ! | TTTGTTAAGGGAAGATATAT+AGG | + | chr1.1:66024784-66024803 | MS.gene68456:CDS | 25.0% |
| !! | AAATGAAGAAGAAATGGATT+TGG | + | chr1.1:66024174-66024193 | MS.gene68456:intron | 25.0% |
| GAGCTAATACTGATAGAAAA+AGG | + | chr1.1:66024338-66024357 | MS.gene68456:CDS | 30.0% | |
| GTTGAAGAAAATTCTTGAAG+GGG | + | chr1.1:66024846-66024865 | MS.gene68456:CDS | 30.0% | |
| GTTTCTTCTACAAAGTTTCA+AGG | + | chr1.1:66024669-66024688 | MS.gene68456:CDS | 30.0% | |
| TTCAGGTAAAATCCATTGAT+GGG | + | chr1.1:66023996-66024015 | MS.gene68456:CDS | 30.0% | |
| ! | CATTTTCTCGAGAAACAAAT+GGG | - | chr1.1:66024066-66024085 | None:intergenic | 30.0% |
| ! | TAATGGTAGCCATAAGATTT+TGG | + | chr1.1:66024939-66024958 | MS.gene68456:CDS | 30.0% |
| ! | TCATTTTCTCGAGAAACAAA+TGG | - | chr1.1:66024067-66024086 | None:intergenic | 30.0% |
| ! | TTTCTATCAGTATTAGCTCT+TGG | - | chr1.1:66024337-66024356 | None:intergenic | 30.0% |
| !! | ACATCAATAATTTCTGGTTG+TGG | - | chr1.1:66024127-66024146 | None:intergenic | 30.0% |
| !! | GTGATGTGTTTTAAGTGTAA+TGG | + | chr1.1:66024922-66024941 | MS.gene68456:CDS | 30.0% |
| !! | TGTTTGTTGTGTAATGAGAA+TGG | + | chr1.1:66024985-66025004 | MS.gene68456:CDS | 30.0% |
| !!! | GTAGAAGAAACCGAATTTTT+TGG | - | chr1.1:66024660-66024679 | None:intergenic | 30.0% |
| AAAATCTGCATACCCATCAA+TGG | - | chr1.1:66024011-66024030 | None:intergenic | 35.0% | |
| AAACTATCACTCTCAGAAAG+AGG | - | chr1.1:66024370-66024389 | None:intergenic | 35.0% | |
| AACTATCACTCTCAGAAAGA+GGG | - | chr1.1:66024369-66024388 | None:intergenic | 35.0% | |
| AAGAAACAGAGTCAAAACAG+AGG | + | chr1.1:66024278-66024297 | MS.gene68456:CDS | 35.0% | |
| AGAAACAGAGTCAAAACAGA+GGG | + | chr1.1:66024279-66024298 | MS.gene68456:CDS | 35.0% | |
| AGTTGAGGAAGAGTTTACAA+AGG | + | chr1.1:66024486-66024505 | MS.gene68456:CDS | 35.0% | |
| CTTCAGGTAAAATCCATTGA+TGG | + | chr1.1:66023995-66024014 | MS.gene68456:CDS | 35.0% | |
| GAAGCTCAAATCAATCAAAC+AGG | + | chr1.1:66023946-66023965 | MS.gene68456:CDS | 35.0% | |
| TCGAAGACTGCCAAAAAATT+CGG | + | chr1.1:66024647-66024666 | MS.gene68456:CDS | 35.0% | |
| TCTCTTCAAATAACGCCAAA+GGG | - | chr1.1:66024558-66024577 | None:intergenic | 35.0% | |
| TTCTCTTCAAATAACGCCAA+AGG | - | chr1.1:66024559-66024578 | None:intergenic | 35.0% | |
| TTTACCTGAAGAATACGTTC+TGG | - | chr1.1:66023986-66024005 | None:intergenic | 35.0% | |
| ! | AGAGTGATAGTTTGTCGTTT+CGG | + | chr1.1:66024377-66024396 | MS.gene68456:CDS | 35.0% |
| ! | ATCAATGCACAAGGAGTATA+AGG | + | chr1.1:66024714-66024733 | MS.gene68456:CDS | 35.0% |
| ! | CCTTTTCTGCCAAAATCTTA+TGG | - | chr1.1:66024951-66024970 | None:intergenic | 35.0% |
| ! | GTTGTTTCGGTTTCGAAAAT+TGG | + | chr1.1:66024247-66024266 | MS.gene68456:intron | 35.0% |
| ! | TTTTGGATCAAACAAGCTAC+CGG | - | chr1.1:66024419-66024438 | None:intergenic | 35.0% |
| !! | CAAGGTTTTGTATCTTGAGA+GGG | + | chr1.1:66024687-66024706 | MS.gene68456:CDS | 35.0% |
| !! | CCATAAGATTTTGGCAGAAA+AGG | + | chr1.1:66024948-66024967 | MS.gene68456:CDS | 35.0% |
| !! | GTGTAATGAGAATGGATTGA+TGG | + | chr1.1:66024993-66025012 | MS.gene68456:CDS | 35.0% |
| !! | GTTCCAATGGATTGTTCTAA+TGG | + | chr1.1:66024868-66024887 | MS.gene68456:CDS | 35.0% |
| !! | TAGTCACAAAGGTGTTGTTT+CGG | + | chr1.1:66024234-66024253 | MS.gene68456:intron | 35.0% |
| !! | TCAAGGTTTTGTATCTTGAG+AGG | + | chr1.1:66024686-66024705 | MS.gene68456:CDS | 35.0% |
| !!! | GTTTTGAGTTTGCATGAACA+AGG | + | chr1.1:66024820-66024839 | MS.gene68456:CDS | 35.0% |
| AAGCTACCGGAATTCAAATC+CGG | - | chr1.1:66024406-66024425 | None:intergenic | 40.0% | |
| AATGCCAGAACGTATTCTTC+AGG | + | chr1.1:66023979-66023998 | MS.gene68456:CDS | 40.0% | |
| AATTCTTGAAGGGGTTCCAA+TGG | + | chr1.1:66024855-66024874 | MS.gene68456:CDS | 40.0% | |
| ACAGAGGAAAAACAGAGTTG+AGG | + | chr1.1:66024471-66024490 | MS.gene68456:CDS | 40.0% | |
| AGAAGTTGAAGTTGACCCTT+TGG | + | chr1.1:66024540-66024559 | MS.gene68456:CDS | 40.0% | |
| CTTCCCTTAACAAAAAGCCT+TGG | - | chr1.1:66024778-66024797 | None:intergenic | 40.0% | |
| GAAAAGTTGCGAGAATTTGC+AGG | + | chr1.1:66024093-66024112 | MS.gene68456:intron | 40.0% | |
| GAGGGATATATCAATGCACA+AGG | + | chr1.1:66024705-66024724 | MS.gene68456:CDS | 40.0% | |
| GGTCCATTAGAACAATCCAT+TGG | - | chr1.1:66024874-66024893 | None:intergenic | 40.0% | |
| TGAGGAAGAGTTTACAAAGG+TGG | + | chr1.1:66024489-66024508 | MS.gene68456:CDS | 40.0% | |
| TTCTACACAACATCGCTTAG+AGG | + | chr1.1:66024610-66024629 | MS.gene68456:CDS | 40.0% | |
| ! | AGGAGTATAAGGATGAACTG+TGG | + | chr1.1:66024725-66024744 | MS.gene68456:CDS | 40.0% |
| ! | CCTCCAAGGCTTTTTGTTAA+GGG | + | chr1.1:66024772-66024791 | MS.gene68456:CDS | 40.0% |
| ! | GTATTAGCTCTTGGTAACAG+TGG | - | chr1.1:66024328-66024347 | None:intergenic | 40.0% |
| ! | TCTCGAGAAACAAATGGGTT+TGG | - | chr1.1:66024061-66024080 | None:intergenic | 40.0% |
| !! | TTGATGGTGTGTCCATATTG+TGG | + | chr1.1:66025009-66025028 | MS.gene68456:CDS | 40.0% |
| AAACCACCACAAGCATCACA+AGG | - | chr1.1:66024895-66024914 | None:intergenic | 45.0% | |
| AACAGAGTCAAAACAGAGGG+AGG | + | chr1.1:66024282-66024301 | MS.gene68456:CDS | 45.0% | |
| AATGGACCTTGTGATGCTTG+TGG | + | chr1.1:66024886-66024905 | MS.gene68456:CDS | 45.0% | |
| CCCTTAACAAAAAGCCTTGG+AGG | - | chr1.1:66024775-66024794 | None:intergenic | 45.0% | |
| GCACAACTTTCTCACCCAAA+AGG | - | chr1.1:66024753-66024772 | None:intergenic | 45.0% | |
| GTGATGCTTGTGGTGGTTTA+AGG | + | chr1.1:66024896-66024915 | MS.gene68456:CDS | 45.0% | |
| ! | AAAACTACTTGCTGCGTTCG+AGG | + | chr1.1:66024435-66024454 | MS.gene68456:CDS | 45.0% |
| ! | GATGAACTGTGGAGCCTTTT+GGG | + | chr1.1:66024736-66024755 | MS.gene68456:CDS | 45.0% |
| ! | GCCTCCAAGGCTTTTTGTTA+AGG | + | chr1.1:66024771-66024790 | MS.gene68456:CDS | 45.0% |
| ! | TAGTTTGTCGTTTCGGAGAC+CGG | + | chr1.1:66024384-66024403 | MS.gene68456:CDS | 45.0% |
| ! | TCGAACGCAGCAAGTAGTTT+TGG | - | chr1.1:66024436-66024455 | None:intergenic | 45.0% |
| ! | TTAGCTCTTGGTAACAGTGG+TGG | - | chr1.1:66024325-66024344 | None:intergenic | 45.0% |
| !! | TTTGAAGAGAAGTGTCCACC+AGG | + | chr1.1:66024568-66024587 | MS.gene68456:CDS | 45.0% |
| AGGAAGCTGTGAAGGAACAG+AGG | + | chr1.1:66024455-66024474 | MS.gene68456:CDS | 50.0% | |
| ATCACAGTACCATCACCACC+TGG | - | chr1.1:66024589-66024608 | None:intergenic | 50.0% | |
| CGGAGACCGGATTTGAATTC+CGG | + | chr1.1:66024397-66024416 | MS.gene68456:CDS | 50.0% | |
| GTGAGAAAGTTGTGCCTCCA+AGG | + | chr1.1:66024758-66024777 | MS.gene68456:CDS | 50.0% | |
| ! | GGATGAACTGTGGAGCCTTT+TGG | + | chr1.1:66024735-66024754 | MS.gene68456:CDS | 50.0% |
| AAGTGTCCACCAGGTGGTGA+TGG | + | chr1.1:66024577-66024596 | MS.gene68456:CDS | 55.0% | |
| ACAGTACCATCACCACCTGG+TGG | - | chr1.1:66024586-66024605 | None:intergenic | 55.0% | |
| GGACCTTGTGATGCTTGTGG+TGG | + | chr1.1:66024889-66024908 | MS.gene68456:CDS | 55.0% | |
| TGCGTTCGAGGAAGCTGTGA+AGG | + | chr1.1:66024447-66024466 | MS.gene68456:CDS | 55.0% | |
| !! | GAAGAGAAGTGTCCACCAGG+TGG | + | chr1.1:66024571-66024590 | MS.gene68456:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 66023917 | 66025035 | 66023917 | ID=MS.gene68456 |
| chr1.1 | mRNA | 66023917 | 66025035 | 66023917 | ID=MS.gene68456.t1;Parent=MS.gene68456 |
| chr1.1 | exon | 66023917 | 66024017 | 66023917 | ID=MS.gene68456.t1.exon1;Parent=MS.gene68456.t1 |
| chr1.1 | CDS | 66023917 | 66024017 | 66023917 | ID=cds.MS.gene68456.t1;Parent=MS.gene68456.t1 |
| chr1.1 | exon | 66024276 | 66025035 | 66024276 | ID=MS.gene68456.t1.exon2;Parent=MS.gene68456.t1 |
| chr1.1 | CDS | 66024276 | 66025035 | 66024276 | ID=cds.MS.gene68456.t1;Parent=MS.gene68456.t1 |
| Gene Sequence |
| Protein sequence |