Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene68741.t1 | XP_003604053.2 | 92.8 | 657 | 26 | 5 | 1 | 639 | 34 | 687 | 0.00E+00 | 1194.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene68741.t1 | P93004 | 89.7 | 282 | 27 | 1 | 358 | 639 | 1 | 280 | 1.5e-142 | 508.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene68741.t1 | A0A1S2Y9C8 | 87.4 | 657 | 59 | 4 | 1 | 639 | 40 | 690 | 0.0e+00 | 1122.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene052367 | MS.gene68741 | 0.809398 | 1.93E-50 | -1.69E-46 |
MS.gene055308 | MS.gene68741 | 0.808445 | 3.09E-50 | -1.69E-46 |
MS.gene056041 | MS.gene68741 | 0.811723 | 6.07E-51 | -1.69E-46 |
MS.gene06057 | MS.gene68741 | 0.813346 | 2.68E-51 | -1.69E-46 |
MS.gene061099 | MS.gene68741 | 0.804267 | 2.35E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene68741.t1 | MTR_3g117990 | 89.362 | 376 | 23 | 3 | 1 | 359 | 34 | 409 | 0.0 | 663 |
MS.gene68741.t1 | MTR_3g118010 | 96.809 | 282 | 6 | 1 | 358 | 639 | 1 | 279 | 0.0 | 547 |
MS.gene68741.t1 | MTR_3g117990 | 86.139 | 303 | 25 | 3 | 1 | 286 | 34 | 336 | 0.0 | 517 |
MS.gene68741.t1 | MTR_3g117990 | 87.313 | 268 | 17 | 3 | 1 | 251 | 34 | 301 | 4.93e-161 | 464 |
MS.gene68741.t1 | MTR_7g101190 | 79.443 | 287 | 48 | 3 | 358 | 636 | 1 | 284 | 3.69e-157 | 453 |
MS.gene68741.t1 | MTR_2g094270 | 74.126 | 286 | 67 | 1 | 358 | 636 | 1 | 286 | 5.65e-151 | 437 |
MS.gene68741.t1 | MTR_4g059390 | 75.532 | 282 | 60 | 2 | 361 | 636 | 6 | 284 | 1.37e-150 | 436 |
MS.gene68741.t1 | MTR_8g098375 | 66.431 | 283 | 91 | 2 | 350 | 628 | 2 | 284 | 4.08e-130 | 384 |
MS.gene68741.t1 | MTR_3g070210 | 71.648 | 261 | 73 | 1 | 370 | 629 | 28 | 288 | 1.62e-128 | 380 |
MS.gene68741.t1 | MTR_4g415300 | 65.217 | 276 | 96 | 0 | 354 | 629 | 13 | 288 | 2.62e-128 | 380 |
MS.gene68741.t1 | MTR_2g094270 | 73.600 | 250 | 59 | 1 | 358 | 600 | 1 | 250 | 3.67e-128 | 379 |
MS.gene68741.t1 | MTR_5g082070 | 71.595 | 257 | 72 | 1 | 374 | 629 | 32 | 288 | 2.27e-126 | 375 |
MS.gene68741.t1 | MTR_5g010150 | 65.603 | 282 | 93 | 2 | 352 | 629 | 4 | 285 | 2.68e-126 | 374 |
MS.gene68741.t1 | MTR_3g070210 | 73.191 | 235 | 62 | 1 | 370 | 603 | 28 | 262 | 1.05e-115 | 347 |
MS.gene68741.t1 | MTR_7g406840 | 44.444 | 378 | 184 | 4 | 1 | 358 | 14 | 385 | 9.62e-113 | 343 |
MS.gene68741.t1 | MTR_1g095070 | 82.828 | 198 | 34 | 0 | 441 | 638 | 23 | 220 | 4.67e-111 | 333 |
MS.gene68741.t1 | MTR_1g087750 | 45.855 | 386 | 184 | 4 | 1 | 365 | 59 | 440 | 2.11e-104 | 325 |
MS.gene68741.t1 | MTR_1g087750 | 42.361 | 432 | 181 | 7 | 1 | 365 | 59 | 489 | 2.96e-98 | 311 |
MS.gene68741.t1 | MTR_4g059390 | 72.500 | 200 | 46 | 2 | 361 | 554 | 6 | 202 | 1.42e-95 | 292 |
MS.gene68741.t1 | MTR_7g102870 | 40.526 | 380 | 194 | 7 | 1 | 355 | 77 | 449 | 6.98e-90 | 288 |
MS.gene68741.t1 | MTR_1g062970 | 40.415 | 386 | 198 | 6 | 1 | 362 | 79 | 456 | 1.05e-89 | 286 |
MS.gene68741.t1 | MTR_1g095070 | 83.750 | 160 | 26 | 0 | 441 | 600 | 23 | 182 | 1.81e-87 | 271 |
MS.gene68741.t1 | MTR_8g098375 | 62.911 | 213 | 75 | 2 | 350 | 558 | 2 | 214 | 5.16e-87 | 271 |
MS.gene68741.t1 | MTR_7g102840 | 39.842 | 379 | 197 | 5 | 1 | 355 | 76 | 447 | 5.18e-87 | 281 |
MS.gene68741.t1 | MTR_3g070210 | 71.505 | 186 | 52 | 1 | 370 | 554 | 28 | 213 | 3.64e-86 | 268 |
MS.gene68741.t1 | MTR_7g112720 | 40.674 | 386 | 199 | 6 | 1 | 361 | 45 | 425 | 4.59e-86 | 277 |
MS.gene68741.t1 | MTR_4g415300 | 62.687 | 201 | 75 | 0 | 354 | 554 | 13 | 213 | 4.83e-85 | 266 |
MS.gene68741.t1 | MTR_5g010150 | 62.679 | 209 | 74 | 2 | 350 | 554 | 2 | 210 | 1.17e-83 | 262 |
MS.gene68741.t1 | MTR_7g112720 | 38.255 | 298 | 155 | 5 | 89 | 361 | 1 | 294 | 3.35e-61 | 207 |
MS.gene68741.t1 | MTR_2g101370 | 40.175 | 229 | 123 | 5 | 397 | 622 | 20 | 237 | 7.55e-38 | 141 |
MS.gene68741.t1 | MTR_8g013680 | 41.364 | 220 | 109 | 6 | 397 | 610 | 19 | 224 | 2.50e-35 | 134 |
MS.gene68741.t1 | MTR_4g063090 | 38.627 | 233 | 128 | 6 | 402 | 630 | 26 | 247 | 7.34e-34 | 130 |
MS.gene68741.t1 | MTR_1g077540 | 38.494 | 239 | 129 | 7 | 389 | 622 | 13 | 238 | 2.61e-33 | 129 |
MS.gene68741.t1 | MTR_1g115405 | 38.095 | 231 | 129 | 5 | 397 | 624 | 21 | 240 | 1.44e-31 | 123 |
MS.gene68741.t1 | MTR_5g012810 | 40.092 | 217 | 115 | 5 | 397 | 610 | 19 | 223 | 4.17e-31 | 122 |
MS.gene68741.t1 | MTR_6g069040 | 37.131 | 237 | 135 | 5 | 389 | 622 | 13 | 238 | 3.54e-30 | 119 |
MS.gene68741.t1 | MTR_7g023350 | 36.681 | 229 | 131 | 5 | 397 | 622 | 21 | 238 | 5.35e-30 | 119 |
MS.gene68741.t1 | MTR_7g103030 | 35.556 | 225 | 130 | 5 | 389 | 610 | 13 | 225 | 2.06e-29 | 117 |
MS.gene68741.t1 | MTR_1g006490 | 35.622 | 233 | 127 | 8 | 397 | 623 | 19 | 234 | 2.89e-29 | 117 |
MS.gene68741.t1 | MTR_1g006590 | 37.021 | 235 | 121 | 10 | 397 | 623 | 19 | 234 | 4.29e-29 | 116 |
MS.gene68741.t1 | MTR_8g087710 | 31.222 | 221 | 137 | 5 | 395 | 615 | 37 | 242 | 9.43e-22 | 96.3 |
MS.gene68741.t1 | MTR_2g104940 | 31.556 | 225 | 138 | 6 | 397 | 621 | 80 | 288 | 1.48e-21 | 96.3 |
MS.gene68741.t1 | MTR_2g017660 | 30.222 | 225 | 142 | 5 | 397 | 621 | 39 | 248 | 6.81e-21 | 93.6 |
MS.gene68741.t1 | MTR_4g006730 | 29.391 | 279 | 160 | 10 | 364 | 634 | 55 | 304 | 5.94e-20 | 91.3 |
MS.gene68741.t1 | MTR_5g079570 | 29.825 | 228 | 144 | 5 | 394 | 621 | 37 | 248 | 9.47e-20 | 90.1 |
MS.gene68741.t1 | MTR_3g008920 | 28.745 | 247 | 157 | 7 | 394 | 639 | 23 | 251 | 1.04e-19 | 89.7 |
MS.gene68741.t1 | MTR_2g060360 | 31.064 | 235 | 135 | 7 | 397 | 622 | 19 | 235 | 4.94e-19 | 87.4 |
MS.gene68741.t1 | MTR_5g063930 | 28.511 | 235 | 151 | 6 | 389 | 621 | 28 | 247 | 5.31e-19 | 87.8 |
MS.gene68741.t1 | MTR_8g087720 | 30.631 | 222 | 139 | 5 | 394 | 615 | 35 | 241 | 1.37e-18 | 86.7 |
MS.gene68741.t1 | MTR_4g084880 | 29.596 | 223 | 143 | 6 | 397 | 618 | 35 | 244 | 3.26e-18 | 85.5 |
MS.gene68741.t1 | MTR_4g075570 | 28.452 | 239 | 148 | 8 | 389 | 612 | 43 | 273 | 7.55e-18 | 85.5 |
MS.gene68741.t1 | MTR_2g017590 | 29.437 | 231 | 148 | 5 | 391 | 621 | 30 | 245 | 1.06e-17 | 84.0 |
MS.gene68741.t1 | MTR_2g017620 | 29.911 | 224 | 142 | 5 | 391 | 614 | 18 | 226 | 2.45e-17 | 82.8 |
MS.gene68741.t1 | MTR_2g017620 | 29.004 | 231 | 149 | 5 | 391 | 621 | 32 | 247 | 3.07e-17 | 82.8 |
MS.gene68741.t1 | MTR_4g075590 | 28.452 | 239 | 148 | 8 | 389 | 612 | 29 | 259 | 1.01e-16 | 82.0 |
MS.gene68741.t1 | MTR_7g010650 | 29.596 | 223 | 137 | 7 | 395 | 615 | 35 | 239 | 1.43e-16 | 80.9 |
MS.gene68741.t1 | MTR_2g017610 | 29.565 | 230 | 137 | 7 | 397 | 621 | 38 | 247 | 5.22e-16 | 79.0 |
MS.gene68741.t1 | MTR_2g017570 | 28.384 | 229 | 141 | 6 | 397 | 621 | 38 | 247 | 1.21e-15 | 78.2 |
MS.gene68741.t1 | MTR_4g006730 | 29.185 | 233 | 141 | 8 | 410 | 634 | 1 | 217 | 1.32e-15 | 76.6 |
MS.gene68741.t1 | MTR_4g006630 | 29.185 | 233 | 141 | 8 | 410 | 634 | 1 | 217 | 1.41e-15 | 76.6 |
MS.gene68741.t1 | MTR_1g097840 | 28.800 | 250 | 158 | 8 | 389 | 634 | 66 | 299 | 3.02e-15 | 77.4 |
MS.gene68741.t1 | MTR_1g070385 | 27.468 | 233 | 131 | 8 | 394 | 615 | 59 | 264 | 7.36e-14 | 75.5 |
MS.gene68741.t1 | MTR_2g017620 | 31.579 | 171 | 105 | 4 | 444 | 614 | 1 | 159 | 1.44e-13 | 70.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene68741.t1 | AT4G35100 | 89.716 | 282 | 27 | 1 | 358 | 639 | 1 | 280 | 0.0 | 516 |
MS.gene68741.t1 | AT4G35100 | 89.716 | 282 | 27 | 1 | 358 | 639 | 1 | 280 | 0.0 | 516 |
MS.gene68741.t1 | AT2G16850 | 90.426 | 282 | 23 | 1 | 358 | 639 | 1 | 278 | 1.19e-180 | 513 |
MS.gene68741.t1 | AT5G60660 | 75.000 | 284 | 64 | 2 | 358 | 635 | 1 | 283 | 3.72e-148 | 431 |
MS.gene68741.t1 | AT2G37170 | 72.819 | 298 | 63 | 5 | 347 | 635 | 36 | 324 | 2.46e-147 | 430 |
MS.gene68741.t1 | AT3G54820 | 74.825 | 286 | 64 | 2 | 358 | 637 | 1 | 284 | 4.70e-147 | 427 |
MS.gene68741.t1 | AT3G53420 | 74.564 | 287 | 60 | 3 | 358 | 635 | 1 | 283 | 1.12e-146 | 427 |
MS.gene68741.t1 | AT3G53420 | 74.564 | 287 | 60 | 3 | 358 | 635 | 1 | 283 | 1.12e-146 | 427 |
MS.gene68741.t1 | AT2G37170 | 74.564 | 287 | 58 | 4 | 358 | 635 | 1 | 281 | 1.13e-145 | 424 |
MS.gene68741.t1 | AT2G39010 | 74.126 | 286 | 64 | 3 | 358 | 636 | 1 | 283 | 3.78e-145 | 423 |
MS.gene68741.t1 | AT2G37180 | 74.913 | 287 | 57 | 4 | 358 | 635 | 1 | 281 | 9.59e-145 | 422 |
MS.gene68741.t1 | AT4G00430 | 69.395 | 281 | 83 | 1 | 352 | 629 | 5 | 285 | 4.26e-135 | 397 |
MS.gene68741.t1 | AT2G45960 | 67.500 | 280 | 89 | 1 | 352 | 629 | 5 | 284 | 1.85e-130 | 385 |
MS.gene68741.t1 | AT1G01620 | 67.708 | 288 | 83 | 2 | 348 | 629 | 1 | 284 | 9.00e-127 | 376 |
MS.gene68741.t1 | AT4G23400 | 67.018 | 285 | 91 | 1 | 348 | 629 | 1 | 285 | 8.78e-124 | 368 |
MS.gene68741.t1 | AT3G61430 | 65.845 | 284 | 95 | 1 | 348 | 629 | 1 | 284 | 6.20e-122 | 363 |
MS.gene68741.t1 | AT3G61430 | 65.845 | 284 | 95 | 1 | 348 | 629 | 1 | 284 | 6.20e-122 | 363 |
MS.gene68741.t1 | AT2G45960 | 69.323 | 251 | 75 | 1 | 352 | 600 | 5 | 255 | 1.49e-118 | 354 |
MS.gene68741.t1 | AT2G45960 | 75.330 | 227 | 56 | 0 | 374 | 600 | 29 | 255 | 3.47e-117 | 352 |
MS.gene68741.t1 | AT1G01620 | 75.472 | 212 | 52 | 0 | 418 | 629 | 1 | 212 | 1.52e-109 | 329 |
MS.gene68741.t1 | AT5G47900 | 49.474 | 380 | 160 | 6 | 1 | 355 | 1 | 373 | 8.24e-109 | 333 |
MS.gene68741.t1 | AT5G47900 | 49.474 | 380 | 160 | 6 | 1 | 355 | 60 | 432 | 2.38e-108 | 334 |
MS.gene68741.t1 | AT5G47900 | 49.474 | 380 | 160 | 6 | 1 | 355 | 60 | 432 | 2.38e-108 | 334 |
MS.gene68741.t1 | AT2G39010 | 71.569 | 204 | 48 | 3 | 358 | 554 | 1 | 201 | 1.87e-93 | 288 |
MS.gene68741.t1 | AT4G00430 | 68.095 | 210 | 64 | 1 | 352 | 558 | 5 | 214 | 7.17e-93 | 286 |
MS.gene68741.t1 | AT5G47900 | 48.649 | 333 | 139 | 6 | 1 | 308 | 60 | 385 | 3.20e-88 | 281 |
MS.gene68741.t1 | AT5G47900 | 47.892 | 332 | 141 | 6 | 50 | 355 | 7 | 332 | 4.21e-88 | 278 |
MS.gene68741.t1 | AT5G27730 | 40.519 | 385 | 200 | 6 | 1 | 361 | 51 | 430 | 4.65e-87 | 280 |
MS.gene68741.t1 | AT5G47900 | 42.674 | 389 | 174 | 9 | 1 | 355 | 54 | 427 | 4.80e-86 | 276 |
MS.gene68741.t1 | AT5G47900 | 44.054 | 370 | 138 | 7 | 1 | 308 | 60 | 422 | 4.21e-81 | 263 |
MS.gene68741.t1 | AT5G27730 | 43.976 | 332 | 157 | 6 | 1 | 308 | 51 | 377 | 9.70e-80 | 258 |
MS.gene68741.t1 | AT5G47900 | 50.000 | 244 | 109 | 3 | 119 | 355 | 11 | 248 | 2.52e-74 | 239 |
MS.gene68741.t1 | AT5G27730 | 44.523 | 283 | 129 | 5 | 1 | 260 | 51 | 328 | 5.25e-73 | 239 |
MS.gene68741.t1 | AT5G47900 | 47.636 | 275 | 112 | 6 | 1 | 250 | 60 | 327 | 2.70e-70 | 232 |
MS.gene68741.t1 | AT5G27730 | 38.344 | 326 | 173 | 5 | 60 | 361 | 28 | 349 | 3.52e-66 | 222 |
MS.gene68741.t1 | AT5G27730 | 42.279 | 272 | 129 | 5 | 61 | 308 | 29 | 296 | 5.30e-59 | 200 |
MS.gene68741.t1 | AT5G47900 | 47.945 | 219 | 87 | 5 | 1 | 199 | 60 | 271 | 4.65e-50 | 176 |
MS.gene68741.t1 | AT5G47900 | 47.297 | 222 | 87 | 5 | 1 | 199 | 60 | 274 | 1.42e-49 | 175 |
MS.gene68741.t1 | AT3G16240 | 42.396 | 217 | 111 | 5 | 397 | 610 | 19 | 224 | 5.29e-36 | 136 |
MS.gene68741.t1 | AT5G47450 | 40.789 | 228 | 120 | 7 | 394 | 617 | 16 | 232 | 9.17e-34 | 130 |
MS.gene68741.t1 | AT4G01470 | 37.555 | 229 | 129 | 5 | 397 | 622 | 21 | 238 | 2.09e-33 | 129 |
MS.gene68741.t1 | AT3G26520 | 36.975 | 238 | 134 | 6 | 389 | 622 | 14 | 239 | 2.69e-33 | 128 |
MS.gene68741.t1 | AT1G73190 | 35.950 | 242 | 136 | 5 | 389 | 622 | 16 | 246 | 2.34e-31 | 123 |
MS.gene68741.t1 | AT1G17810 | 37.190 | 242 | 133 | 5 | 389 | 622 | 16 | 246 | 6.99e-31 | 122 |
MS.gene68741.t1 | AT4G17340 | 38.462 | 247 | 129 | 8 | 397 | 639 | 19 | 246 | 4.00e-30 | 119 |
MS.gene68741.t1 | AT2G36830 | 37.327 | 217 | 122 | 5 | 397 | 610 | 21 | 226 | 1.43e-29 | 118 |
MS.gene68741.t1 | AT2G25810 | 37.281 | 228 | 127 | 7 | 397 | 622 | 19 | 232 | 4.94e-28 | 113 |
MS.gene68741.t1 | AT3G47440 | 30.864 | 243 | 147 | 8 | 386 | 622 | 12 | 239 | 7.49e-23 | 99.0 |
MS.gene68741.t1 | AT4G19030 | 27.046 | 281 | 186 | 5 | 338 | 615 | 1 | 265 | 1.76e-19 | 89.7 |
MS.gene68741.t1 | AT1G80760 | 29.098 | 244 | 154 | 6 | 394 | 634 | 77 | 304 | 7.57e-18 | 85.1 |
MS.gene68741.t1 | AT1G31885 | 27.876 | 226 | 147 | 5 | 394 | 615 | 40 | 253 | 1.65e-17 | 84.7 |
MS.gene68741.t1 | AT4G10380 | 29.778 | 225 | 142 | 5 | 394 | 618 | 75 | 283 | 1.36e-16 | 81.6 |
MS.gene68741.t1 | AT5G37820 | 28.761 | 226 | 144 | 5 | 397 | 621 | 79 | 288 | 1.42e-16 | 81.6 |
MS.gene68741.t1 | AT5G37820 | 29.515 | 227 | 141 | 6 | 397 | 621 | 43 | 252 | 2.07e-16 | 80.5 |
MS.gene68741.t1 | AT4G18910 | 27.232 | 224 | 149 | 4 | 395 | 615 | 50 | 262 | 4.84e-15 | 76.6 |
MS.gene68741.t1 | AT5G37810 | 26.692 | 266 | 174 | 7 | 359 | 621 | 5 | 252 | 1.36e-14 | 75.1 |
MS.gene68741.t1 | AT2G34390 | 28.571 | 231 | 148 | 7 | 395 | 621 | 46 | 263 | 1.40e-13 | 72.4 |
MS.gene68741.t1 | AT1G31885 | 28.947 | 190 | 122 | 4 | 430 | 615 | 19 | 199 | 1.45e-13 | 72.0 |
MS.gene68741.t1 | AT2G34390 | 28.448 | 232 | 149 | 7 | 394 | 621 | 3 | 221 | 5.46e-13 | 69.7 |
MS.gene68741.t1 | AT3G06100 | 30.000 | 230 | 136 | 9 | 397 | 621 | 46 | 255 | 1.44e-11 | 65.9 |
Find 179 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AGCTTCCGGTTTCACATTTA+TGG | 0.131675 | 3.2:+93046021 | MS.gene68741:CDS |
TGCATTATTGGACTTCAATA+TGG | 0.179392 | 3.2:+93045475 | MS.gene68741:CDS |
GCTGCAGTTTCATGCATTAT+TGG | 0.191483 | 3.2:+93045463 | MS.gene68741:CDS |
TGTGACGGTGTTGGCCTTCT+AGG | 0.206372 | 3.2:+93056017 | MS.gene68741:CDS |
CTTATGATATTTGTCGATTA+TGG | 0.223955 | 3.2:+93043331 | None:intergenic |
TCATTCCAACTCTTTATTCT+TGG | 0.246225 | 3.2:+93043517 | MS.gene68741:CDS |
CCTTTCTTTCTCTTCCTTGT+TGG | 0.247561 | 3.2:+93043421 | MS.gene68741:CDS |
GAGTCCCGTGCGCTTCTCTT+AGG | 0.269420 | 3.2:-93056365 | None:intergenic |
CTGCTTAGCTCTGCAGCTTC+CGG | 0.284725 | 3.2:+93046007 | MS.gene68741:CDS |
TCAAGGAGGGGTGCTGGTGG+TGG | 0.295321 | 3.2:-93055873 | None:intergenic |
GTTCAAACTATACGCTTCTT+TGG | 0.296079 | 3.2:+93043598 | MS.gene68741:CDS |
GGGTGGTTCCTTGCGTTAAT+AGG | 0.300918 | 3.2:+93045757 | MS.gene68741:CDS |
TATGCATGCAGTGGATCTTC+TGG | 0.301366 | 3.2:+93056628 | MS.gene68741:intron |
TCTTCAACAATGCCAAAGTT+TGG | 0.312604 | 3.2:+93056507 | MS.gene68741:CDS |
ATGATTGATCGCTATATTCT+TGG | 0.323341 | 3.2:+93044239 | MS.gene68741:CDS |
GGTTACCTTAAAATGCCTTC+TGG | 0.328597 | 3.2:-93044473 | None:intergenic |
GGACTCACATGTCCCTGTTT+TGG | 0.328630 | 3.2:+93056382 | MS.gene68741:CDS |
ATTTATGGCTTTATATATTC+TGG | 0.342580 | 3.2:+93046036 | MS.gene68741:CDS |
GTGTACAGAGATTTATTTAG+AGG | 0.350332 | 3.2:-93045971 | None:intergenic |
AATTAATTAATTAATTTAGT+TGG | 0.352963 | 3.2:-93056751 | None:intergenic |
GCACATTCTTGCCAACTTAG+AGG | 0.363831 | 3.2:+93045498 | MS.gene68741:CDS |
CTAGGCATAGCATGGTCCTT+TGG | 0.364281 | 3.2:+93056035 | MS.gene68741:CDS |
ATTCTTGGCATCCTTCTTCA+AGG | 0.367489 | 3.2:+93043532 | MS.gene68741:CDS |
TAAACATTGGCGCCTTGAAT+TGG | 0.371732 | 3.2:-93043919 | None:intergenic |
TCTTCTTTGCCTCCAATTCA+AGG | 0.372683 | 3.2:+93043907 | MS.gene68741:CDS |
ACTCTGCAGGTAGATGTTTA+CGG | 0.374686 | 3.2:+93046219 | MS.gene68741:intron |
CCGCCGCCTAGGTGGTTGTA+AGG | 0.374976 | 3.2:-93056242 | None:intergenic |
ACCTTAAGATTTCTGAAAAC+AGG | 0.377103 | 3.2:-93044284 | None:intergenic |
ATGGGCAAAGGAGCCAAAAC+AGG | 0.383343 | 3.2:-93056395 | None:intergenic |
AATCATTCCAGCAGAATTGC+AGG | 0.385868 | 3.2:-93044222 | None:intergenic |
CTCTGCAGGTAGATGTTTAC+GGG | 0.398068 | 3.2:+93046220 | MS.gene68741:intron |
CTTCAACAATGCCAAAGTTT+GGG | 0.399277 | 3.2:+93056508 | MS.gene68741:CDS |
GGCAGAGCCTTTGCTGTAAC+CGG | 0.402530 | 3.2:-93056282 | None:intergenic |
GCATTATTGGACTTCAATAT+GGG | 0.409722 | 3.2:+93045476 | MS.gene68741:CDS |
TGTTCAGTGAGAGGTGATCT+TGG | 0.410959 | 3.2:+93044194 | MS.gene68741:CDS |
CCGCTCTAAGAATGTATTGA+TGG | 0.413506 | 3.2:-93056689 | None:intergenic |
CAAGGAGGGGTGCTGGTGGT+GGG | 0.413906 | 3.2:-93055872 | None:intergenic |
GATGCATCGAAGTGCCAATC+TGG | 0.416971 | 3.2:-93043874 | None:intergenic |
GTCCTTGTCTACTGCACCGC+TGG | 0.418520 | 3.2:+93056071 | MS.gene68741:CDS |
GCCCTCGGTGCTGAAATTAT+CGG | 0.421803 | 3.2:+93056302 | MS.gene68741:CDS |
AGGACCATGCTATGCCTAGA+AGG | 0.427239 | 3.2:-93056031 | None:intergenic |
GTTGGTGGGGTTGCTTCTAA+AGG | 0.429287 | 3.2:-93056733 | None:intergenic |
AATTAATTAATTTAGTTGGT+GGG | 0.430160 | 3.2:-93056747 | None:intergenic |
TACTGCACCGCTGGTATCTC+CGG | 0.434993 | 3.2:+93056080 | MS.gene68741:CDS |
AGTCCCGTGCGCTTCTCTTA+GGG | 0.437868 | 3.2:-93056364 | None:intergenic |
GCTCCTAGCAGGGTTGATTC+CGG | 0.438753 | 3.2:-93056468 | None:intergenic |
ATTTACTCCGGATTGTTGTA+TGG | 0.438927 | 3.2:+93043841 | MS.gene68741:CDS |
CTTCTGGGTTGGACCGTTGG+TGG | 0.441035 | 3.2:+93056644 | MS.gene68741:CDS |
TGGACCGTTGGTGGGAGCGT+TGG | 0.441974 | 3.2:+93056653 | MS.gene68741:CDS |
TTGATTCCGGTACCGGTGAT+TGG | 0.445472 | 3.2:-93056455 | None:intergenic |
ATCAACCCTGCTAGGAGCTT+CGG | 0.445533 | 3.2:+93056473 | MS.gene68741:CDS |
TACATGGTAGCACAGTGTTT+AGG | 0.447822 | 3.2:+93056176 | MS.gene68741:CDS |
GACAAGTGTGTTGGAGTGGA+TGG | 0.450359 | 3.2:+93046254 | MS.gene68741:CDS |
GCGGCGGCTATCAAGGCGTT+GGG | 0.451615 | 3.2:+93056708 | MS.gene68741:CDS |
TCTAAAGAAGTGAGTGAAGA+AGG | 0.451723 | 3.2:+93055813 | MS.gene68741:CDS |
CCATGGAGCATGAGAAATGA+TGG | 0.451821 | 3.2:-93043368 | None:intergenic |
AGCGGCGGCTATCAAGGCGT+TGG | 0.453049 | 3.2:+93056707 | MS.gene68741:CDS |
TGTTCTTGTATCTTCAAACT+TGG | 0.454466 | 3.2:+93046299 | MS.gene68741:CDS |
TAAAGCCATAAATGTGAAAC+CGG | 0.454471 | 3.2:-93046026 | None:intergenic |
GGACCTGCCTGCAATTCTGC+TGG | 0.460227 | 3.2:+93044215 | MS.gene68741:CDS |
TCTTAGAGCGGCGGCTATCA+AGG | 0.465345 | 3.2:+93056701 | MS.gene68741:CDS |
AGCAGGGTTGATTCCGGTAC+CGG | 0.467989 | 3.2:-93056462 | None:intergenic |
AAAATGCCTTCTGGATCAAA+AGG | 0.469212 | 3.2:-93044464 | None:intergenic |
ATTAACCCTGCTGTCACATT+CGG | 0.470489 | 3.2:+93056110 | MS.gene68741:CDS |
GGCATCAATTCCTTCACATA+TGG | 0.470691 | 3.2:+93043568 | MS.gene68741:CDS |
GTTTCTAGCAGCAATATTGT+TGG | 0.471022 | 3.2:+93043816 | MS.gene68741:CDS |
GATCTTCTGGGTTGGACCGT+TGG | 0.472135 | 3.2:+93056641 | MS.gene68741:CDS |
AGCCAACACAATCTACTACT+TGG | 0.474321 | 3.2:+93043479 | MS.gene68741:CDS |
TTGGCCGTGATTGCAATTCA+AGG | 0.479960 | 3.2:+93046318 | MS.gene68741:CDS |
TTCTGGGTTGGACCGTTGGT+GGG | 0.480051 | 3.2:+93056645 | MS.gene68741:CDS |
GAAAATAACCACCTTGAAGA+AGG | 0.482226 | 3.2:-93043543 | None:intergenic |
ATTAATTAATTTAGTTGGTG+GGG | 0.483253 | 3.2:-93056746 | None:intergenic |
GCGAAGTCAAGGAGGGGTGC+TGG | 0.483574 | 3.2:-93055879 | None:intergenic |
TGCTATCTGTGGCGTTGGGT+TGG | 0.487734 | 3.2:+93056199 | MS.gene68741:CDS |
ACATTGGCGCCTTGAATTGG+AGG | 0.491113 | 3.2:-93043916 | None:intergenic |
GTCACTGTCGCCACCGTCAT+TGG | 0.492002 | 3.2:+93055972 | MS.gene68741:CDS |
ATGAGAAATGATGGGGAAGA+TGG | 0.492402 | 3.2:-93043359 | None:intergenic |
TAATTAATTAATTTAGTTGG+TGG | 0.492825 | 3.2:-93056748 | None:intergenic |
CTGTGGCGTTGGGTTGGTGA+AGG | 0.493175 | 3.2:+93056205 | MS.gene68741:CDS |
ATGGTCTATATGTTCCAGAT+TGG | 0.496797 | 3.2:+93043860 | MS.gene68741:CDS |
GGCATAGCATGGTCCTTTGG+TGG | 0.497936 | 3.2:+93056038 | MS.gene68741:CDS |
GCAGCACCGAAGCTCCTAGC+AGG | 0.500446 | 3.2:-93056479 | None:intergenic |
TACAGCAAAGGCTCTGCCCT+CGG | 0.501785 | 3.2:+93056287 | MS.gene68741:CDS |
CCATCATTTCTCATGCTCCA+TGG | 0.501869 | 3.2:+93043368 | MS.gene68741:CDS |
TTAGGTGCTATCTGTGGCGT+TGG | 0.502610 | 3.2:+93056194 | MS.gene68741:CDS |
ACACTTTACGAGCCAAGAAA+AGG | 0.506621 | 3.2:-93056133 | None:intergenic |
CGACAGTGACGTAGAGAAAG+AGG | 0.507110 | 3.2:-93055959 | None:intergenic |
AGTGATTTAGGCGCCCTTTG+TGG | 0.507807 | 3.2:-93045702 | None:intergenic |
ACTATACCAATCACCGGTAC+CGG | 0.509500 | 3.2:+93056449 | MS.gene68741:CDS |
CCAACAAGGAAGAGAAAGAA+AGG | 0.513124 | 3.2:-93043421 | None:intergenic |
TACATGGTCATCCCAAACTT+TGG | 0.513712 | 3.2:-93056519 | None:intergenic |
CAGAGTTAGCACCGCCGCCT+AGG | 0.517082 | 3.2:-93056253 | None:intergenic |
ATTTCTCATGCTCCATGGAA+TGG | 0.517246 | 3.2:+93043373 | MS.gene68741:CDS |
ACATGATCTCACCTCTAAGT+TGG | 0.518261 | 3.2:-93045509 | None:intergenic |
ACAAAGGGCGCCTAAATCAC+TGG | 0.519041 | 3.2:+93045704 | MS.gene68741:CDS |
CATAAGAGCGGTGTTATACA+TGG | 0.519758 | 3.2:+93056160 | MS.gene68741:CDS |
AAAAGGCCGAATGTGACAGC+AGG | 0.520051 | 3.2:-93056116 | None:intergenic |
AGTTGGAATGATCTAAGTAA+TGG | 0.520686 | 3.2:-93043505 | None:intergenic |
CAATACTGTAGGACCACAAA+GGG | 0.522623 | 3.2:+93045689 | MS.gene68741:intron |
ATGCATGCAGTGGATCTTCT+GGG | 0.527197 | 3.2:+93056629 | MS.gene68741:intron |
GGGCGCCTAAATCACTGGCT+TGG | 0.529127 | 3.2:+93045709 | MS.gene68741:CDS |
ACGGTGAACTATCTGAAACT+TGG | 0.530146 | 3.2:-93044427 | None:intergenic |
TTCCAAGTAGTAGATTGTGT+TGG | 0.530377 | 3.2:-93043481 | None:intergenic |
ATGATATTTGTCGATTATGG+TGG | 0.535720 | 3.2:+93043334 | MS.gene68741:CDS |
CGCCGCCTAGGTGGTTGTAA+GGG | 0.536394 | 3.2:-93056241 | None:intergenic |
GGTGCTAACTCTGTAGCTTC+CGG | 0.550093 | 3.2:+93056263 | MS.gene68741:CDS |
TAGGTGCTATCTGTGGCGTT+GGG | 0.554325 | 3.2:+93056195 | MS.gene68741:CDS |
ATATTGTTGGCAATTTACTC+CGG | 0.555052 | 3.2:+93043829 | MS.gene68741:CDS |
TAGTCCTTACCGTGAGGATG+TGG | 0.555862 | 3.2:-93055843 | None:intergenic |
GTTGGTGGGAGCGTTGGCAG+CGG | 0.556763 | 3.2:+93056659 | MS.gene68741:CDS |
CAGACGTTTGACAAGTGTGT+TGG | 0.557488 | 3.2:+93046245 | MS.gene68741:CDS |
ACAAGTGTGTTGGAGTGGAT+GGG | 0.559908 | 3.2:+93046255 | MS.gene68741:CDS |
TCCGATAATTTCAGCACCGA+GGG | 0.562447 | 3.2:-93056303 | None:intergenic |
AAATCCTTGAATTGCAATCA+CGG | 0.562969 | 3.2:-93046322 | None:intergenic |
GGATGCCAAGAATAAAGAGT+TGG | 0.564020 | 3.2:-93043522 | None:intergenic |
AAGTCAAGGAGGGGTGCTGG+TGG | 0.564356 | 3.2:-93055876 | None:intergenic |
CTTGGCATCCTTCTTCAAGG+TGG | 0.564926 | 3.2:+93043535 | MS.gene68741:CDS |
GTAGCTTCCGGTTACAGCAA+AGG | 0.567822 | 3.2:+93056275 | MS.gene68741:CDS |
GAGTGCAATATGTCTAGCAC+TGG | 0.569204 | 3.2:+93044404 | MS.gene68741:CDS |
CATGGAGCATGAGAAATGAT+GGG | 0.571546 | 3.2:-93043367 | None:intergenic |
TTTCAGATAGTTCACCGTCA+TGG | 0.572351 | 3.2:+93044432 | MS.gene68741:CDS |
ACAGCAAAACCAATGGGCAA+AGG | 0.573216 | 3.2:-93056407 | None:intergenic |
AGCAGGGTTAATGTGGCCAC+CGG | 0.573223 | 3.2:-93056099 | None:intergenic |
TTGGCCTTCTAGGCATAGCA+TGG | 0.579145 | 3.2:+93056027 | MS.gene68741:CDS |
CCTACCACATCCTCACGGTA+AGG | 0.579509 | 3.2:+93055839 | MS.gene68741:CDS |
GCAAGGTGAAGACCATTCCA+TGG | 0.582375 | 3.2:-93043385 | None:intergenic |
GCTTAATCTCAGCGAAGTCA+AGG | 0.584024 | 3.2:-93055890 | None:intergenic |
GCTGCCAACGCTCCCACCAA+CGG | 0.587110 | 3.2:-93056657 | None:intergenic |
CTAAAGAAGTGAGTGAAGAA+GGG | 0.592831 | 3.2:+93055814 | MS.gene68741:CDS |
CCTTACAACCACCTAGGCGG+CGG | 0.593116 | 3.2:+93056242 | MS.gene68741:CDS |
TATTCTCACGGTGTAAACAT+TGG | 0.594566 | 3.2:-93043932 | None:intergenic |
TACCAGCGGTGCAGTAGACA+AGG | 0.595575 | 3.2:-93056073 | None:intergenic |
GACAAAGATCATGCCACCAA+AGG | 0.596121 | 3.2:-93056051 | None:intergenic |
ATATAGACCATACAACAATC+CGG | 0.597198 | 3.2:-93043848 | None:intergenic |
ATGTGACAGCAGGGTTAATG+TGG | 0.601114 | 3.2:-93056106 | None:intergenic |
CGGTGATTGGTATAGTTGCA+AGG | 0.601911 | 3.2:-93056442 | None:intergenic |
CAGCACCGAAGCTCCTAGCA+GGG | 0.610916 | 3.2:-93056478 | None:intergenic |
GTACCGGAATCAACCCTGCT+AGG | 0.610944 | 3.2:+93056465 | MS.gene68741:CDS |
AACACAAACCTATTAACGCA+AGG | 0.613812 | 3.2:-93045765 | None:intergenic |
AATCTCAGCGAAGTCAAGGA+GGG | 0.616287 | 3.2:-93055886 | None:intergenic |
CAGGTGAATTGTTCAGTGAG+AGG | 0.616782 | 3.2:+93044185 | MS.gene68741:intron |
AGAAGGCCAACACCGTCACA+TGG | 0.616986 | 3.2:-93056014 | None:intergenic |
AACGTCAAGACCATATGTGA+AGG | 0.617892 | 3.2:-93043578 | None:intergenic |
ATGCAGTGGATCTTCTGGGT+TGG | 0.623221 | 3.2:+93056633 | MS.gene68741:intron |
TGCACCGCTGGTATCTCCGG+TGG | 0.624717 | 3.2:+93056083 | MS.gene68741:CDS |
ATTCCAGCAGAATTGCAGGC+AGG | 0.625616 | 3.2:-93044218 | None:intergenic |
ACTTCGCTGAGATTAAGCAC+TGG | 0.630134 | 3.2:+93055895 | MS.gene68741:CDS |
ATCTCAGCGAAGTCAAGGAG+GGG | 0.630738 | 3.2:-93055885 | None:intergenic |
CCTTACCGTGAGGATGTGGT+AGG | 0.631606 | 3.2:-93055839 | None:intergenic |
TGACCCTAAGAGAAGCGCAC+GGG | 0.634134 | 3.2:+93056361 | MS.gene68741:CDS |
CTTGCAACTATACCAATCAC+CGG | 0.635837 | 3.2:+93056443 | MS.gene68741:CDS |
TGGGCAAAGGAGCCAAAACA+GGG | 0.637363 | 3.2:-93056394 | None:intergenic |
AAACAAACTGGTCCATGTGA+CGG | 0.639153 | 3.2:+93056002 | MS.gene68741:CDS |
GTTTGACAAGTGTGTTGGAG+TGG | 0.639516 | 3.2:+93046250 | MS.gene68741:CDS |
ACAATACTGTAGGACCACAA+AGG | 0.644164 | 3.2:+93045688 | MS.gene68741:intron |
CAGTGACGTAGAGAAAGAGG+AGG | 0.644359 | 3.2:-93055956 | None:intergenic |
TTGAATTGGAGGCAAAGAAG+AGG | 0.646002 | 3.2:-93043905 | None:intergenic |
AGTTAGCACCGCCGCCTAGG+TGG | 0.648428 | 3.2:-93056250 | None:intergenic |
CAGTGTTTAGGTGCTATCTG+TGG | 0.653498 | 3.2:+93056188 | MS.gene68741:CDS |
AAAGGCCGAATGTGACAGCA+GGG | 0.654056 | 3.2:-93056115 | None:intergenic |
TCTAAATAAATCTCTGTACA+CGG | 0.654333 | 3.2:+93045973 | MS.gene68741:CDS |
TAATCTCAGCGAAGTCAAGG+AGG | 0.655437 | 3.2:-93055887 | None:intergenic |
ACTGGTCCATGTGACGGTGT+TGG | 0.657929 | 3.2:+93056008 | MS.gene68741:CDS |
TTCCGATAATTTCAGCACCG+AGG | 0.665140 | 3.2:-93056304 | None:intergenic |
TCAATACATTCTTAGAGCGG+CGG | 0.665343 | 3.2:+93056692 | MS.gene68741:CDS |
CTGACCCTAAGAGAAGCGCA+CGG | 0.668284 | 3.2:+93056360 | MS.gene68741:CDS |
ATGGAGCATGAGAAATGATG+GGG | 0.677643 | 3.2:-93043366 | None:intergenic |
AAACACCCTTACAACCACCT+AGG | 0.684637 | 3.2:+93056236 | MS.gene68741:CDS |
AAAGGAGCGTGACACCATGA+CGG | 0.685895 | 3.2:-93044446 | None:intergenic |
CACCCTTACAACCACCTAGG+CGG | 0.687114 | 3.2:+93056239 | MS.gene68741:CDS |
CCATCAATACATTCTTAGAG+CGG | 0.687313 | 3.2:+93056689 | MS.gene68741:CDS |
TAAAGTGTCTCTCATAAGAG+CGG | 0.688091 | 3.2:+93056148 | MS.gene68741:CDS |
AGTGACGTAGAGAAAGAGGA+GGG | 0.690484 | 3.2:-93055955 | None:intergenic |
GGGCACCTACCACATCCTCA+CGG | 0.692416 | 3.2:+93055834 | MS.gene68741:CDS |
GACGTAGAGAAAGAGGAGGG+TGG | 0.694343 | 3.2:-93055952 | None:intergenic |
AAGGCATGACGAAATCAGCA+AGG | 0.697375 | 3.2:-93043402 | None:intergenic |
GTGGCCACCGGAGATACCAG+CGG | 0.716451 | 3.2:-93056087 | None:intergenic |
TCTACGTAGTCCTTACCGTG+AGG | 0.728979 | 3.2:-93055849 | None:intergenic |
GTGCAAGAGAGATACCAACA+AGG | 0.751478 | 3.2:-93043435 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.2 | gene | 93043334 | 93056758 | 93043334 | ID=MS.gene68741 |
chr3.2 | mRNA | 93043334 | 93056758 | 93043334 | ID=MS.gene68741.t1;Parent=MS.gene68741 |
chr3.2 | exon | 93043334 | 93043664 | 93043334 | ID=MS.gene68741.t1.exon1;Parent=MS.gene68741.t1 |
chr3.2 | CDS | 93043334 | 93043664 | 93043334 | ID=cds.MS.gene68741.t1;Parent=MS.gene68741.t1 |
chr3.2 | exon | 93043797 | 93043945 | 93043797 | ID=MS.gene68741.t1.exon2;Parent=MS.gene68741.t1 |
chr3.2 | CDS | 93043797 | 93043945 | 93043797 | ID=cds.MS.gene68741.t1;Parent=MS.gene68741.t1 |
chr3.2 | exon | 93044188 | 93044304 | 93044188 | ID=MS.gene68741.t1.exon3;Parent=MS.gene68741.t1 |
chr3.2 | CDS | 93044188 | 93044304 | 93044188 | ID=cds.MS.gene68741.t1;Parent=MS.gene68741.t1 |
chr3.2 | exon | 93044404 | 93044489 | 93044404 | ID=MS.gene68741.t1.exon4;Parent=MS.gene68741.t1 |
chr3.2 | CDS | 93044404 | 93044489 | 93044404 | ID=cds.MS.gene68741.t1;Parent=MS.gene68741.t1 |
chr3.2 | exon | 93045453 | 93045519 | 93045453 | ID=MS.gene68741.t1.exon5;Parent=MS.gene68741.t1 |
chr3.2 | CDS | 93045453 | 93045519 | 93045453 | ID=cds.MS.gene68741.t1;Parent=MS.gene68741.t1 |
chr3.2 | exon | 93045700 | 93045778 | 93045700 | ID=MS.gene68741.t1.exon6;Parent=MS.gene68741.t1 |
chr3.2 | CDS | 93045700 | 93045778 | 93045700 | ID=cds.MS.gene68741.t1;Parent=MS.gene68741.t1 |
chr3.2 | exon | 93045966 | 93046057 | 93045966 | ID=MS.gene68741.t1.exon7;Parent=MS.gene68741.t1 |
chr3.2 | CDS | 93045966 | 93046057 | 93045966 | ID=cds.MS.gene68741.t1;Parent=MS.gene68741.t1 |
chr3.2 | exon | 93046228 | 93046371 | 93046228 | ID=MS.gene68741.t1.exon8;Parent=MS.gene68741.t1 |
chr3.2 | CDS | 93046228 | 93046371 | 93046228 | ID=cds.MS.gene68741.t1;Parent=MS.gene68741.t1 |
chr3.2 | exon | 93055804 | 93056538 | 93055804 | ID=MS.gene68741.t1.exon9;Parent=MS.gene68741.t1 |
chr3.2 | CDS | 93055804 | 93056538 | 93055804 | ID=cds.MS.gene68741.t1;Parent=MS.gene68741.t1 |
chr3.2 | exon | 93056639 | 93056758 | 93056639 | ID=MS.gene68741.t1.exon10;Parent=MS.gene68741.t1 |
chr3.2 | CDS | 93056639 | 93056758 | 93056639 | ID=cds.MS.gene68741.t1;Parent=MS.gene68741.t1 |
Gene Sequence |
Protein sequence |