AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene055308


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene055308.t1 MTR_7g061020 95.421 546 25 0 23 568 92 637 0.0 1080
MS.gene055308.t1 MTR_6g053680 38.082 365 206 8 26 389 66 411 6.19e-62 219
MS.gene055308.t1 MTR_6g053680 42.857 105 54 2 458 560 800 900 4.72e-17 85.5
MS.gene055308.t1 MTR_3g100270 36.102 313 161 7 24 300 62 371 1.95e-52 193
MS.gene055308.t1 MTR_5g066320 37.543 293 148 6 24 284 70 359 3.04e-51 190
MS.gene055308.t1 MTR_1g067630 36.620 284 155 6 26 284 116 399 5.44e-50 186
MS.gene055308.t1 MTR_3g102170 36.964 303 147 9 26 284 63 365 9.68e-50 185
MS.gene055308.t1 MTR_1g018940 36.808 307 146 9 24 284 61 365 1.09e-48 182
MS.gene055308.t1 MTR_2g096010 35.915 284 158 6 25 284 110 393 4.67e-48 180
MS.gene055308.t1 MTR_4g094882 35.806 310 149 8 24 284 65 373 1.75e-47 179
MS.gene055308.t1 MTR_7g105030 34.256 289 161 5 25 284 70 358 1.25e-46 176
MS.gene055308.t1 MTR_7g105030 34.256 289 161 5 25 284 70 358 1.25e-46 176
MS.gene055308.t1 MTR_1g059730 34.375 288 160 5 26 284 75 362 1.48e-46 176
MS.gene055308.t1 MTR_2g055910 36.364 286 170 6 25 300 133 416 3.49e-42 160
MS.gene055308.t1 MTR_5g025100 37.313 268 157 5 26 284 947 1212 1.34e-41 161
MS.gene055308.t1 MTR_1g081800 32.993 294 180 4 30 306 146 439 3.68e-41 157
MS.gene055308.t1 MTR_8g098230 38.603 272 135 8 33 278 550 815 1.12e-40 158
MS.gene055308.t1 MTR_4g112350 39.925 268 147 8 25 280 190 455 1.30e-40 157
MS.gene055308.t1 MTR_8g072430 36.194 268 160 5 26 284 933 1198 2.16e-40 157
MS.gene055308.t1 MTR_8g098230 37.970 266 137 6 33 278 550 807 8.78e-40 155
MS.gene055308.t1 MTR_2g101990 34.296 277 162 8 18 283 242 509 1.81e-39 154
MS.gene055308.t1 MTR_5g031470 35.632 261 159 4 30 282 462 721 2.40e-39 154
MS.gene055308.t1 MTR_6g086735 35.401 274 157 8 21 283 175 439 2.71e-39 153
MS.gene055308.t1 MTR_6g086735 35.401 274 157 8 21 283 175 439 3.20e-39 152
MS.gene055308.t1 MTR_3g117330 33.942 274 171 7 20 285 148 419 3.34e-39 154
MS.gene055308.t1 MTR_5g049620 35.249 261 160 4 30 282 437 696 7.90e-39 152
MS.gene055308.t1 MTR_5g049820 35.249 261 160 4 30 282 437 696 9.27e-39 152
MS.gene055308.t1 MTR_2g069950 33.333 327 199 9 21 332 395 717 1.50e-38 152
MS.gene055308.t1 MTR_4g092140 34.266 286 161 6 18 278 370 653 4.15e-38 149
MS.gene055308.t1 MTR_4g071210 33.579 271 165 7 25 285 144 409 9.57e-38 149
MS.gene055308.t1 MTR_4g071210 33.579 271 165 7 25 285 144 409 9.58e-38 149
MS.gene055308.t1 MTR_5g011500 32.646 291 170 5 22 286 114 404 1.00e-37 149
MS.gene055308.t1 MTR_3g084790 31.944 288 167 5 26 284 151 438 1.15e-37 149
MS.gene055308.t1 MTR_4g087040 33.922 283 163 5 26 284 250 532 1.44e-37 149
MS.gene055308.t1 MTR_7g093720 34.082 267 163 7 26 282 129 392 1.46e-37 149
MS.gene055308.t1 MTR_1g017540 33.096 281 172 4 22 286 57 337 1.79e-37 148
MS.gene055308.t1 MTR_3g113110 33.829 269 162 5 25 283 81 343 2.55e-37 148
MS.gene055308.t1 MTR_7g075060 31.379 290 174 5 22 286 109 398 3.27e-37 147
MS.gene055308.t1 MTR_2g087840 32.646 291 172 5 18 284 137 427 6.81e-37 147
MS.gene055308.t1 MTR_5g096570 36.330 267 140 6 33 278 501 758 1.35e-36 146
MS.gene055308.t1 MTR_4g123730 33.696 276 159 6 33 284 213 488 2.34e-36 145
MS.gene055308.t1 MTR_7g113520 34.601 263 161 4 30 282 190 451 5.76e-36 143
MS.gene055308.t1 MTR_2g436650 32.248 307 161 9 21 291 178 473 9.91e-36 143
MS.gene055308.t1 MTR_4g119980 33.681 288 153 9 21 283 266 540 1.09e-35 143
MS.gene055308.t1 MTR_2g436650 32.248 307 161 9 21 291 258 553 1.45e-35 142
MS.gene055308.t1 MTR_1g484960 30.255 314 196 7 18 308 46 359 1.72e-35 143
MS.gene055308.t1 MTR_4g081390 34.043 282 160 6 21 278 489 768 1.90e-35 142
MS.gene055308.t1 MTR_3g060900 36.398 261 146 6 30 278 502 754 5.95e-35 141
MS.gene055308.t1 MTR_7g112420 34.340 265 153 6 30 278 336 595 6.32e-35 140
MS.gene055308.t1 MTR_2g010760 34.859 284 169 7 18 287 488 769 1.60e-34 139
MS.gene055308.t1 MTR_7g109130 35.740 277 140 8 30 277 240 507 3.44e-34 138
MS.gene055308.t1 MTR_8g080910 32.180 289 166 6 26 284 106 394 3.51e-34 139
MS.gene055308.t1 MTR_7g109130 35.740 277 140 8 30 277 161 428 3.79e-34 138
MS.gene055308.t1 MTR_1g082920 34.601 263 161 5 30 282 210 471 4.20e-34 138
MS.gene055308.t1 MTR_7g112420 35.135 259 153 6 30 278 466 719 4.59e-34 138
MS.gene055308.t1 MTR_7g109130 35.740 277 140 8 30 277 462 729 6.04e-34 138
MS.gene055308.t1 MTR_1g087880 34.296 277 144 7 30 277 458 725 9.65e-34 137
MS.gene055308.t1 MTR_7g091290 35.115 262 156 5 29 278 453 712 1.21e-33 137
MS.gene055308.t1 MTR_7g109130 34.926 272 152 6 30 277 462 732 1.32e-33 137
MS.gene055308.t1 MTR_6g082470 35.740 277 159 8 20 284 85 354 1.39e-33 137
MS.gene055308.t1 MTR_8g076190 29.907 321 194 8 25 337 82 379 2.42e-33 136
MS.gene055308.t1 MTR_8g076190 29.907 321 194 8 25 337 82 379 3.83e-33 135
MS.gene055308.t1 MTR_5g021650 28.615 325 197 6 22 335 80 380 4.12e-33 135
MS.gene055308.t1 MTR_4g071900 33.468 248 151 4 25 264 85 326 4.37e-33 135
MS.gene055308.t1 MTR_8g104200 35.606 264 154 6 30 278 578 840 4.95e-33 135
MS.gene055308.t1 MTR_2g082570 32.095 296 167 6 30 292 464 758 1.00e-32 134
MS.gene055308.t1 MTR_8g076190 29.573 328 193 9 25 337 82 386 1.16e-32 134
MS.gene055308.t1 MTR_1g083770 31.579 285 180 5 30 301 472 754 1.39e-31 130
MS.gene055308.t1 MTR_4g124650 32.721 272 167 6 22 284 199 463 2.71e-31 130
MS.gene055308.t1 MTR_7g091290 35.156 256 123 6 29 278 450 668 1.02e-30 128
MS.gene055308.t1 MTR_4g081390 34.274 248 139 5 21 246 491 736 1.19e-30 127
MS.gene055308.t1 MTR_3g055940 27.083 288 181 5 26 284 123 410 1.20e-23 106
MS.gene055308.t1 MTR_6g084490 30.935 278 142 7 30 278 540 796 7.83e-23 103
MS.gene055308.t1 MTR_1g075680 26.351 296 165 7 26 282 115 396 1.68e-22 102
MS.gene055308.t1 MTR_8g471180 30.000 260 167 7 30 281 207 459 1.81e-22 102
MS.gene055308.t1 MTR_5g094310 28.669 293 170 9 26 284 124 411 1.10e-21 100
MS.gene055308.t1 MTR_3g113630 28.223 287 173 11 25 287 157 434 1.88e-20 96.3
MS.gene055308.t1 MTR_3g113630 28.223 287 173 11 25 287 157 434 2.15e-20 96.3
MS.gene055308.t1 MTR_2g082570 30.392 204 118 4 30 210 464 666 5.92e-17 84.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene055308.t1 AT5G02370 56.566 495 186 9 23 505 87 564 1.01e-173 504
MS.gene055308.t1 AT5G23910 42.126 254 137 6 26 278 70 314 7.49e-54 194
MS.gene055308.t1 AT5G23910 52.381 84 40 0 476 559 618 701 3.69e-19 92.0
MS.gene055308.t1 AT5G23910 42.126 254 137 6 26 278 74 318 7.79e-54 194
MS.gene055308.t1 AT5G23910 52.381 84 40 0 476 559 622 705 3.98e-19 91.7
MS.gene055308.t1 AT5G60930 36.184 304 151 6 24 284 59 362 1.00e-51 191
MS.gene055308.t1 AT5G60930 36.184 304 151 6 24 284 59 362 1.09e-51 191
MS.gene055308.t1 AT5G60930 36.184 304 151 6 24 284 59 362 1.16e-51 191
MS.gene055308.t1 AT3G50240 36.646 322 153 9 16 291 72 388 7.14e-51 188
MS.gene055308.t1 AT3G50240 36.646 322 153 9 16 291 72 388 7.40e-51 189
MS.gene055308.t1 AT3G50240 36.646 322 153 9 16 291 72 388 7.82e-51 189
MS.gene055308.t1 AT5G47820 36.246 309 149 9 24 284 64 372 2.13e-50 187
MS.gene055308.t1 AT5G47820 36.246 309 149 9 24 284 64 372 2.13e-50 187
MS.gene055308.t1 AT3G49650 41.797 256 138 4 41 286 95 349 3.06e-50 186
MS.gene055308.t1 AT3G45850 34.828 290 164 6 20 284 110 399 7.85e-49 183
MS.gene055308.t1 AT3G45850 34.828 290 164 6 20 284 110 399 7.85e-49 183
MS.gene055308.t1 AT2G28620 35.862 290 161 7 20 284 105 394 7.29e-48 180
MS.gene055308.t1 AT2G28620 35.862 290 161 7 20 284 105 394 8.87e-48 179
MS.gene055308.t1 AT2G28620 35.862 290 161 7 20 284 105 394 8.87e-48 179
MS.gene055308.t1 AT2G37420 36.082 291 162 7 26 292 110 400 1.34e-47 179
MS.gene055308.t1 AT2G37420 36.082 291 162 7 26 292 110 400 1.34e-47 179
MS.gene055308.t1 AT2G36200 33.681 288 162 5 26 284 74 361 9.83e-45 171
MS.gene055308.t1 AT2G36200 33.681 288 162 5 26 284 74 361 1.14e-44 170
MS.gene055308.t1 AT1G12430 33.121 314 185 5 22 310 127 440 2.54e-42 163
MS.gene055308.t1 AT1G12430 33.121 314 185 5 22 310 127 440 2.65e-42 163
MS.gene055308.t1 AT5G65930 34.448 299 180 8 26 314 945 1237 4.46e-42 163
MS.gene055308.t1 AT5G65930 34.448 299 180 8 26 314 946 1238 4.55e-42 162
MS.gene055308.t1 AT5G65930 34.448 299 180 8 26 314 952 1244 4.64e-42 162
MS.gene055308.t1 AT1G18550 39.147 258 144 5 34 280 227 482 1.09e-41 160
MS.gene055308.t1 AT1G18410 37.786 262 149 6 30 278 553 813 1.26e-41 161
MS.gene055308.t1 AT1G18410 37.786 262 149 6 30 278 553 813 1.26e-41 161
MS.gene055308.t1 AT1G18410 38.610 259 143 6 30 278 543 795 1.26e-41 161
MS.gene055308.t1 AT3G63480 34.021 291 170 6 26 295 63 352 1.28e-41 156
MS.gene055308.t1 AT2G22610 35.640 289 171 7 30 310 481 762 1.93e-41 160
MS.gene055308.t1 AT2G22610 35.640 289 171 7 30 310 480 761 2.26e-41 160
MS.gene055308.t1 AT2G22610 35.640 289 171 7 30 310 480 761 2.31e-41 160
MS.gene055308.t1 AT1G18410 37.786 262 149 6 30 278 696 956 3.03e-41 160
MS.gene055308.t1 AT1G18410 38.610 259 143 6 30 278 696 948 3.13e-41 160
MS.gene055308.t1 AT5G06670 33.083 266 167 6 26 282 122 385 6.52e-41 158
MS.gene055308.t1 AT5G06670 33.083 266 167 6 26 282 122 385 6.52e-41 158
MS.gene055308.t1 AT5G06670 33.083 266 167 6 26 282 122 385 6.52e-41 158
MS.gene055308.t1 AT5G06670 33.083 266 167 6 26 282 122 385 7.29e-41 158
MS.gene055308.t1 AT5G06670 33.083 266 167 6 26 282 122 385 8.64e-41 159
MS.gene055308.t1 AT5G06670 33.083 266 167 6 26 282 122 385 8.64e-41 159
MS.gene055308.t1 AT5G27950 36.567 268 155 4 30 282 137 404 1.26e-40 156
MS.gene055308.t1 AT4G05190 34.228 298 161 6 15 278 456 752 1.48e-40 157
MS.gene055308.t1 AT3G50240 35.664 286 135 8 52 291 4 286 1.76e-40 157
MS.gene055308.t1 AT4G05190 34.228 298 161 6 15 278 469 765 2.17e-40 157
MS.gene055308.t1 AT4G21270 33.893 298 162 6 15 278 472 768 7.98e-40 155
MS.gene055308.t1 AT1G55550 35.338 266 157 5 30 282 148 411 9.09e-40 155
MS.gene055308.t1 AT3G16060 35.036 274 158 8 21 283 229 493 1.59e-39 154
MS.gene055308.t1 AT5G41310 38.281 256 132 6 33 278 489 728 1.64e-39 155
MS.gene055308.t1 AT3G63480 33.559 295 170 7 26 295 63 356 1.78e-39 150
MS.gene055308.t1 AT1G73860 36.122 263 153 5 30 278 490 751 2.04e-39 154
MS.gene055308.t1 AT4G39050 34.082 267 167 6 26 285 154 418 2.52e-39 154
MS.gene055308.t1 AT1G21730 33.088 272 171 6 20 282 125 394 2.55e-39 154
MS.gene055308.t1 AT1G73860 36.122 263 153 5 30 278 573 834 3.12e-39 154
MS.gene055308.t1 AT3G12020 36.255 251 149 7 41 282 140 388 3.51e-39 154
MS.gene055308.t1 AT3G12020 36.255 251 149 7 41 282 140 388 3.51e-39 154
MS.gene055308.t1 AT3G12020 36.255 251 149 7 41 282 140 388 4.97e-39 153
MS.gene055308.t1 AT3G12020 36.255 251 149 7 41 282 140 388 4.97e-39 153
MS.gene055308.t1 AT3G19050 34.420 276 157 7 33 284 257 532 8.06e-39 153
MS.gene055308.t1 AT5G06670 34.818 247 150 6 45 282 150 394 9.40e-39 152
MS.gene055308.t1 AT5G06670 34.818 247 150 6 45 282 150 394 9.40e-39 152
MS.gene055308.t1 AT2G21380 33.208 265 168 6 25 282 159 421 4.56e-38 150
MS.gene055308.t1 AT2G21380 33.208 265 168 6 25 282 159 421 4.56e-38 150
MS.gene055308.t1 AT1G59540 33.086 269 170 4 26 284 59 327 4.65e-38 150
MS.gene055308.t1 AT3G10310 35.740 277 162 5 29 291 424 698 7.67e-38 150
MS.gene055308.t1 AT3G10310 35.740 277 162 5 29 291 424 698 9.13e-38 149
MS.gene055308.t1 AT1G01950 30.631 333 200 7 22 329 117 443 1.03e-37 149
MS.gene055308.t1 AT1G01950 30.631 333 200 7 22 329 117 443 1.13e-37 149
MS.gene055308.t1 AT1G72250 34.532 278 158 7 22 282 556 826 1.15e-37 149
MS.gene055308.t1 AT1G72250 34.532 278 158 7 22 282 547 817 1.17e-37 149
MS.gene055308.t1 AT1G01950 30.631 333 200 7 22 329 117 443 1.25e-37 149
MS.gene055308.t1 AT1G72250 34.532 278 158 7 22 282 568 838 1.31e-37 149
MS.gene055308.t1 AT1G72250 34.532 278 158 7 22 282 567 837 1.34e-37 149
MS.gene055308.t1 AT1G63640 36.680 259 143 6 33 278 539 789 2.09e-37 149
MS.gene055308.t1 AT3G44050 33.333 288 168 5 21 284 145 432 6.26e-37 147
MS.gene055308.t1 AT1G63640 36.090 266 142 6 33 278 539 796 6.29e-37 147
MS.gene055308.t1 AT1G63640 36.090 266 142 6 33 278 539 796 6.29e-37 147
MS.gene055308.t1 AT1G63640 36.090 266 142 6 33 278 539 796 6.29e-37 147
MS.gene055308.t1 AT1G63640 35.688 269 145 6 30 278 526 786 7.85e-37 147
MS.gene055308.t1 AT3G54870 30.124 322 202 6 22 320 161 482 2.02e-36 145
MS.gene055308.t1 AT3G54870 30.124 322 202 6 22 320 161 482 2.16e-36 145
MS.gene055308.t1 AT3G54870 30.124 322 202 6 22 320 161 482 2.19e-36 145
MS.gene055308.t1 AT3G17360 34.028 288 166 5 21 284 220 507 2.40e-36 145
MS.gene055308.t1 AT3G17360 34.028 288 166 5 21 284 220 507 2.54e-36 145
MS.gene055308.t1 AT3G17360 34.028 288 166 5 21 284 220 507 2.75e-36 145
MS.gene055308.t1 AT3G44730 35.915 284 151 8 21 278 468 746 3.08e-36 145
MS.gene055308.t1 AT3G44730 35.915 284 151 8 21 278 468 746 3.08e-36 145
MS.gene055308.t1 AT3G44730 35.915 284 151 8 21 278 423 701 3.26e-36 145
MS.gene055308.t1 AT3G44730 35.915 284 151 8 21 278 423 701 3.26e-36 145
MS.gene055308.t1 AT2G47500 34.657 277 143 7 30 277 461 728 5.65e-36 144
MS.gene055308.t1 AT2G47500 34.657 277 143 7 30 277 461 728 6.77e-36 144
MS.gene055308.t1 AT3G51150 34.191 272 163 5 22 283 77 342 7.22e-36 144
MS.gene055308.t1 AT3G51150 34.191 272 163 5 22 283 77 342 7.64e-36 144
MS.gene055308.t1 AT3G51150 34.191 272 163 5 22 283 77 342 7.64e-36 144
MS.gene055308.t1 AT3G51150 34.191 272 163 5 22 283 77 342 7.64e-36 144
MS.gene055308.t1 AT3G10180 32.258 310 191 6 25 318 54 360 1.14e-35 143
MS.gene055308.t1 AT3G10180 32.258 310 191 6 25 318 54 360 1.17e-35 143
MS.gene055308.t1 AT4G14150 32.432 296 170 8 19 284 133 428 2.83e-35 142
MS.gene055308.t1 AT3G23670 32.872 289 165 7 25 284 145 433 2.96e-35 142
MS.gene055308.t1 AT3G16630 34.155 284 157 9 21 283 253 527 3.04e-35 141
MS.gene055308.t1 AT3G16630 34.155 284 157 9 21 283 253 527 3.04e-35 141
MS.gene055308.t1 AT5G27000 33.716 261 160 5 30 278 458 717 3.14e-35 142
MS.gene055308.t1 AT3G23670 32.872 289 165 7 25 284 145 433 3.96e-35 142
MS.gene055308.t1 AT3G43210 34.496 258 148 5 39 284 102 350 8.40e-35 140
MS.gene055308.t1 AT3G43210 34.496 258 148 5 39 284 102 350 8.40e-35 140
MS.gene055308.t1 AT3G43210 34.496 258 148 5 39 284 102 350 8.40e-35 140
MS.gene055308.t1 AT3G43210 34.496 258 148 5 39 284 102 350 8.40e-35 140
MS.gene055308.t1 AT3G43210 34.496 258 148 5 39 284 102 350 8.40e-35 140
MS.gene055308.t1 AT5G66310 33.829 269 162 5 25 283 81 343 1.05e-34 140
MS.gene055308.t1 AT5G66310 33.829 269 162 5 25 283 81 343 1.05e-34 140
MS.gene055308.t1 AT5G66310 33.829 269 162 5 25 283 81 343 1.05e-34 140
MS.gene055308.t1 AT1G18370 35.316 269 158 6 26 284 93 355 1.24e-34 140
MS.gene055308.t1 AT1G09170 35.316 269 152 7 30 277 497 764 2.24e-34 139
MS.gene055308.t1 AT1G09170 35.316 269 152 7 30 277 497 764 2.73e-34 139
MS.gene055308.t1 AT4G27180 34.074 270 156 5 30 278 452 720 2.94e-34 138
MS.gene055308.t1 AT4G27180 34.074 270 156 5 30 278 452 720 2.94e-34 138
MS.gene055308.t1 AT1G09170 35.316 269 152 7 30 277 497 764 3.93e-34 138
MS.gene055308.t1 AT1G09170 35.316 269 152 7 30 277 497 764 4.22e-34 138
MS.gene055308.t1 AT1G09170 35.316 269 152 7 30 277 497 764 4.22e-34 138
MS.gene055308.t1 AT5G54670 33.704 270 157 5 30 278 401 669 6.07e-34 137
MS.gene055308.t1 AT5G54670 33.704 270 157 5 30 278 461 729 7.21e-34 137
MS.gene055308.t1 AT5G54670 33.704 270 157 5 30 278 461 729 7.21e-34 137
MS.gene055308.t1 AT4G24170 34.363 259 151 7 37 283 76 327 1.61e-33 137
MS.gene055308.t1 AT4G24170 34.363 259 151 7 37 283 76 327 1.61e-33 137
MS.gene055308.t1 AT1G01950 30.844 308 182 7 47 329 1 302 1.68e-32 133
MS.gene055308.t1 AT5G27550 32.584 267 161 5 30 282 195 456 1.96e-31 130
MS.gene055308.t1 AT5G27550 32.584 267 161 5 30 282 195 456 1.96e-31 130
MS.gene055308.t1 AT1G09170 34.221 263 127 6 30 277 497 728 2.19e-30 127
MS.gene055308.t1 AT1G09170 35.931 231 137 5 30 250 497 726 2.39e-30 126
MS.gene055308.t1 AT1G09170 35.931 231 137 5 30 250 497 726 2.39e-30 126
MS.gene055308.t1 AT2G21300 32.258 248 154 4 25 264 85 326 3.11e-30 126
MS.gene055308.t1 AT2G21300 32.258 248 154 4 25 264 85 326 3.11e-30 126
MS.gene055308.t1 AT2G21300 32.258 248 154 4 25 264 85 326 3.11e-30 126
MS.gene055308.t1 AT2G21300 32.258 248 154 4 25 264 85 326 3.11e-30 126
MS.gene055308.t1 AT2G21300 32.258 248 154 4 25 264 85 326 3.11e-30 126
MS.gene055308.t1 AT5G27950 34.874 238 140 4 60 282 1 238 8.67e-30 122
MS.gene055308.t1 AT4G38950 30.357 280 171 5 3 264 42 315 1.08e-28 122
MS.gene055308.t1 AT4G38950 30.357 280 171 5 3 264 42 315 1.08e-28 122
MS.gene055308.t1 AT4G38950 30.357 280 171 5 3 264 42 315 1.08e-28 122
MS.gene055308.t1 AT4G38950 30.357 280 171 5 3 264 42 315 1.08e-28 122
MS.gene055308.t1 AT4G38950 30.357 280 171 5 3 264 42 315 1.08e-28 122
MS.gene055308.t1 AT1G59540 31.064 235 152 4 60 284 1 235 2.41e-27 117
MS.gene055308.t1 AT5G65460 28.571 399 237 13 30 397 199 580 1.18e-26 115
MS.gene055308.t1 AT5G65460 28.571 399 237 13 30 397 199 580 1.45e-26 115
MS.gene055308.t1 AT5G65460 28.571 399 237 13 30 397 199 580 1.47e-26 115
MS.gene055308.t1 AT5G65460 28.571 399 237 13 30 397 199 580 1.62e-26 115
MS.gene055308.t1 AT4G14330 28.470 281 165 8 23 282 102 367 2.33e-24 108
MS.gene055308.t1 AT5G65460 28.079 406 237 14 30 397 199 587 3.28e-24 108
MS.gene055308.t1 AT5G10470 29.032 279 182 6 30 301 203 472 1.58e-23 106
MS.gene055308.t1 AT5G10470 29.032 279 182 6 30 301 203 472 1.64e-23 106
MS.gene055308.t1 AT5G42490 32.381 210 128 4 25 227 70 272 2.83e-23 105
MS.gene055308.t1 AT5G42490 32.381 210 128 4 25 227 70 272 2.98e-23 105
MS.gene055308.t1 AT3G51150 38.182 165 95 3 126 283 25 189 1.91e-22 102
MS.gene055308.t1 AT3G20150 25.773 291 181 8 26 284 151 438 1.24e-20 97.1
MS.gene055308.t1 AT3G20150 25.773 291 181 8 26 284 151 438 1.27e-20 97.1
MS.gene055308.t1 AT1G20060 28.794 257 161 6 26 265 178 429 1.90e-19 93.2
MS.gene055308.t1 AT1G20060 28.794 257 161 6 26 265 178 429 1.99e-19 93.2
MS.gene055308.t1 AT1G20060 28.794 257 161 6 26 265 178 429 1.99e-19 93.2
MS.gene055308.t1 AT1G20060 28.794 257 161 6 26 265 178 429 2.10e-19 93.2
MS.gene055308.t1 AT1G20060 28.794 257 161 6 26 265 178 429 2.17e-19 92.8
MS.gene055308.t1 AT1G20060 28.794 257 161 6 26 265 178 429 2.17e-19 92.8
MS.gene055308.t1 AT1G20060 28.794 257 161 6 26 265 178 429 2.18e-19 92.8
MS.gene055308.t1 AT1G20060 28.794 257 161 6 26 265 178 429 2.19e-19 92.8
MS.gene055308.t1 AT1G20060 28.794 257 161 6 26 265 178 429 2.23e-19 92.8
MS.gene055308.t1 AT5G65460 28.443 334 196 12 90 397 18 334 2.69e-14 76.6
MS.gene055308.t1 AT1G20060 26.394 269 164 8 26 265 178 441 1.83e-13 73.9

Find 126 sgRNAs with CRISPR-Local

Find 319 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGATTCCAATGCTGCCTTAT+TGG 0.176877 7.1:-40595037 None:intergenic
CTCCACTAAGAAAGGGTTTC+AGG 0.192536 7.1:+40595552 MS.gene055308:CDS
CTGTCCCTATAGGGTGTTCT+TGG 0.234705 7.1:-40593815 None:intergenic
AATTCGGACATTGTATTTAC+AGG 0.240436 7.1:-40593428 None:intergenic
AGCAAGTGAGATTTCAGTTT+TGG 0.243100 7.1:+40593361 MS.gene055308:CDS
CTAGAGAGTCCTGCAATATA+CGG 0.293700 7.1:-40593847 None:intergenic
TGCTGGTACATCTTTGCTTA+AGG 0.296025 7.1:-40595422 None:intergenic
AGAGGAGTTACTAGAGTTAA+AGG 0.297792 7.1:+40595854 MS.gene055308:CDS
TTCTAGCCAAGCTTTCAATT+TGG 0.299864 7.1:-40594439 None:intergenic
ATCTGTTCATACTGTTAGTT+TGG 0.307923 7.1:+40594335 MS.gene055308:CDS
AAGAAAGGGTTTCAGGAAAA+TGG 0.319274 7.1:+40595559 MS.gene055308:CDS
GCTGGTACATCTTTGCTTAA+GGG 0.322766 7.1:-40595421 None:intergenic
AATGGGGTTGTTATTGTTAG+AGG 0.324244 7.1:-40591848 None:intergenic
TGCCCTCATGGTTGCCTGCC+TGG 0.327794 7.1:+40593883 MS.gene055308:CDS
GACTGAGCATGAGGCCAATA+AGG 0.332710 7.1:+40595023 MS.gene055308:CDS
CCTTACCTTGGAAACTGAAA+TGG 0.336754 7.1:-40591866 None:intergenic
AATGCTACTGTGTTTGCTTA+TGG 0.345908 7.1:+40592257 MS.gene055308:CDS
TTCCTGAAACCCTTTCTTAG+TGG 0.355395 7.1:-40595554 None:intergenic
GTCAATTTGCTGTCCCTATA+GGG 0.356552 7.1:-40593824 None:intergenic
GTGGAGCAGGTTGCAGAAAA+AGG 0.356653 7.1:-40595535 None:intergenic
TGCAAGAAGTTCTGCTTTGA+AGG 0.362396 7.1:+40595603 MS.gene055308:CDS
TCAGAATCCAGGAGAATATC+AGG 0.366885 7.1:+40594311 MS.gene055308:intron
ATAGTCCCCTGAGGTGAATA+TGG 0.371640 7.1:-40593397 None:intergenic
GGTCAATTTGCTGTCCCTAT+AGG 0.380127 7.1:-40593825 None:intergenic
CAAACCAAGAACACCCTATA+GGG 0.384546 7.1:+40593811 MS.gene055308:CDS
TACTGTGTAAGCAGGGCCTT+TGG 0.386750 7.1:+40594714 MS.gene055308:intron
CTTACCTTGGAAACTGAAAT+GGG 0.387259 7.1:-40591865 None:intergenic
TCAGGGCATAGGAGACAAAA+TGG 0.393383 7.1:+40596286 MS.gene055308:intron
TCCATGTCAACGTTACCTTT+TGG 0.410793 7.1:-40594414 None:intergenic
AGAAGAAAGTCCACTAAAAT+CGG 0.413708 7.1:+40596331 MS.gene055308:CDS
ACAAACCAAGAACACCCTAT+AGG 0.421273 7.1:+40593810 MS.gene055308:CDS
TTAAGTGACCTGGAGAAAAT+TGG 0.424670 7.1:+40596443 MS.gene055308:CDS
GCTTATGGTGCTACTGGTAG+TGG 0.426928 7.1:+40592272 MS.gene055308:CDS
AAACCCTTTCTTAGTGGAGC+AGG 0.438676 7.1:-40595548 None:intergenic
GGAGAAGACCTCTTGAAATT+CGG 0.440719 7.1:-40593444 None:intergenic
GTGTTTGCTTATGGTGCTAC+TGG 0.443703 7.1:+40592266 MS.gene055308:CDS
CAAATTGACCCGTATATTGC+AGG 0.450340 7.1:+40593838 MS.gene055308:CDS
CGTATATTGCAGGACTCTCT+AGG 0.452947 7.1:+40593848 MS.gene055308:CDS
GCTATGTAGAACATGCATTC+TGG 0.454134 7.1:+40594976 MS.gene055308:intron
TATGTGTGATTTCAGAATCC+AGG 0.457622 7.1:+40594300 MS.gene055308:intron
GCAACCTGCTCCACTAAGAA+AGG 0.467614 7.1:+40595544 MS.gene055308:CDS
TGAATACCATTGATGTTGAC+GGG 0.468513 7.1:-40595478 None:intergenic
CTCTCTCCCGTCAACATCAA+TGG 0.470898 7.1:+40595472 MS.gene055308:CDS
AATTGGTCTGTCTTTGAAGC+AGG 0.472337 7.1:+40596460 MS.gene055308:CDS
AATAGAAGGAGCTGCAATGA+AGG 0.472976 7.1:+40593710 MS.gene055308:CDS
TGGAAGCCAAATTGAAAGCT+TGG 0.473460 7.1:+40594433 MS.gene055308:CDS
AACTTATAGCTTTACCAGGC+AGG 0.481857 7.1:-40593897 None:intergenic
ACAGATTCCTGATATTCTCC+TGG 0.485357 7.1:-40594318 None:intergenic
TTAGTTTGGCTGCTCGATCA+AGG 0.490952 7.1:+40594349 MS.gene055308:CDS
CCGAAAATAGCCGGTATCAT+CGG 0.493905 7.1:-40592227 None:intergenic
CAACCCCATTTCAGTTTCCA+AGG 0.495157 7.1:+40591861 MS.gene055308:CDS
GGGATCTAGTCGTGCCCTCA+TGG 0.500153 7.1:+40593871 MS.gene055308:CDS
CAGGTAATGAAGACAATAGA+AGG 0.502947 7.1:+40593696 MS.gene055308:intron
ATTGTATTCCTTCAGGGCAT+AGG 0.503428 7.1:+40596275 MS.gene055308:intron
TTGAATACCATTGATGTTGA+CGG 0.505132 7.1:-40595479 None:intergenic
AAGATGGCCATATTCACCTC+AGG 0.507995 7.1:+40593390 MS.gene055308:CDS
TACTTTCAATAGCTCAGTGA+AGG 0.508772 7.1:+40594566 MS.gene055308:CDS
AATGGACTTTGTAGTACTGC+TGG 0.509124 7.1:-40595439 None:intergenic
TGAGGCCAATAAGGCAGCAT+TGG 0.510390 7.1:+40595032 MS.gene055308:CDS
TGATCTCCTAGCAGAGGTAA+TGG 0.510719 7.1:-40594541 None:intergenic
CACATTTGACAGTGCAAACA+AGG 0.511891 7.1:-40593768 None:intergenic
CAGGGAACTGAAGAACAACC+TGG 0.514866 7.1:+40593221 MS.gene055308:intron
AAGCACTCCATGACTCCTGC+TGG 0.523110 7.1:-40593516 None:intergenic
GTCTCTAGTTTATGAGCTGA+AGG 0.524968 7.1:-40594390 None:intergenic
GTATATTGCAGGACTCTCTA+GGG 0.527165 7.1:+40593849 MS.gene055308:CDS
TTTGCGCCTCTGAATACCAC+TGG 0.531310 7.1:-40593465 None:intergenic
ATTTGTTAAATAATGCAAGC+AGG 0.533405 7.1:+40595734 MS.gene055308:CDS
TTCATACTATGAGGTCTACA+TGG 0.535101 7.1:+40593310 MS.gene055308:CDS
AGAAGTTAGTCCGATGATAC+CGG 0.535452 7.1:+40592217 MS.gene055308:CDS
ATTGCCAACGGCATCAAGCC+AGG 0.538567 7.1:-40593239 None:intergenic
TCAGGAAAATGGCACTCCAC+TGG 0.539018 7.1:+40595570 MS.gene055308:CDS
TACTATCGACTCCTCCTGAT+GGG 0.542716 7.1:+40593549 MS.gene055308:CDS
TTGACAAATAGACAGGATAG+TGG 0.543005 7.1:-40593264 None:intergenic
ACAAGACTTCCATTCCCATC+AGG 0.544458 7.1:-40593563 None:intergenic
GACGTATCCAGCAGGAGTCA+TGG 0.547288 7.1:+40593509 MS.gene055308:CDS
CTGAACCTCATAGACTTGGC+AGG 0.548095 7.1:+40593596 MS.gene055308:CDS
CATAAACTAGAGACACCAAA+AGG 0.549478 7.1:+40594399 MS.gene055308:CDS
TAGAGAGTCCTGCAATATAC+GGG 0.552724 7.1:-40593846 None:intergenic
CATGTTGCAGTTAAGTGACC+TGG 0.553001 7.1:+40596433 MS.gene055308:intron
TTAGTGGACTTTCTTCTCTG+AGG 0.555574 7.1:-40596325 None:intergenic
TCGACTCCTCCTGATGGGAA+TGG 0.557805 7.1:+40593554 MS.gene055308:CDS
TGGAAAGACATATACTATGC+AGG 0.559413 7.1:+40592292 MS.gene055308:CDS
TCAAAGACATAGTCTGAAGA+TGG 0.559622 7.1:-40595504 None:intergenic
CAACCTGCTCCACTAAGAAA+GGG 0.561860 7.1:+40595545 MS.gene055308:CDS
AAGAGCTCACAACAAAGACT+TGG 0.567161 7.1:+40594477 MS.gene055308:CDS
GCCTCAATGACGTATCCAGC+AGG 0.568523 7.1:+40593501 MS.gene055308:CDS
GTACTATCGACTCCTCCTGA+TGG 0.574583 7.1:+40593548 MS.gene055308:CDS
GCAGAGGTAATGGTGGAACC+AGG 0.578211 7.1:-40594531 None:intergenic
AGCTCAAATTTCATACTATG+AGG 0.579166 7.1:+40593301 MS.gene055308:CDS
GGTAACCTGCCAAGTCTATG+AGG 0.585231 7.1:-40593601 None:intergenic
TACAATGTCCGAATTTCAAG+AGG 0.592483 7.1:+40593436 MS.gene055308:CDS
GAATCATATAATGATGTACC+TGG 0.593975 7.1:+40595054 MS.gene055308:CDS
TTTCAAGAGGTCTTCTCCAG+TGG 0.601275 7.1:+40593449 MS.gene055308:CDS
CTTGCACTGAATTTGTCCAG+TGG 0.602500 7.1:-40595586 None:intergenic
GGGAATGGAAGTCTTGTATG+TGG 0.605834 7.1:+40593569 MS.gene055308:CDS
ACAACCTGGCTTGATGCCGT+TGG 0.606768 7.1:+40593235 MS.gene055308:CDS
CTGTCTATTTGTCAAAACAC+TGG 0.610198 7.1:+40593272 MS.gene055308:CDS
TTACATCCACCGAAAATAGC+CGG 0.611157 7.1:-40592236 None:intergenic
ACCAAAAGGTAACGTTGACA+TGG 0.612646 7.1:+40594413 MS.gene055308:CDS
ACTTTCAATAGCTCAGTGAA+GGG 0.614829 7.1:+40594567 MS.gene055308:CDS
ATAGAAGGAGCTGCAATGAA+GGG 0.615772 7.1:+40593711 MS.gene055308:CDS
AGGCGCAAAACTGCACACAC+AGG 0.616518 7.1:+40593479 MS.gene055308:CDS
AAAACTGAACCTCATAGACT+TGG 0.619189 7.1:+40593592 MS.gene055308:CDS
TAAGAGAGAGACTGAGCATG+AGG 0.631727 7.1:+40595014 MS.gene055308:CDS
GTTCCACCATTACCTCTGCT+AGG 0.634367 7.1:+40594535 MS.gene055308:CDS
AGATGGCCATATTCACCTCA+GGG 0.636559 7.1:+40593391 MS.gene055308:CDS
TCTTCTCCAGTGGTATTCAG+AGG 0.640669 7.1:+40593459 MS.gene055308:CDS
TACCAGGCAGGCAACCATGA+GGG 0.641534 7.1:-40593885 None:intergenic
GAACATGCATTCTGGTGTTG+AGG 0.643262 7.1:+40594984 MS.gene055308:intron
TCTCCTAGCAGAGGTAATGG+TGG 0.644704 7.1:-40594538 None:intergenic
ACTCTAAGAGGTCGTAACAT+CGG 0.645191 7.1:-40593334 None:intergenic
AGTAACTGATCTCCTAGCAG+AGG 0.645669 7.1:-40594547 None:intergenic
AAAGCTTGGCTAGAATCAAG+AGG 0.648838 7.1:+40594447 MS.gene055308:CDS
TTCAATAGCTCAGTGAAGGG+TGG 0.656508 7.1:+40594570 MS.gene055308:CDS
AGACTTCCATTCCCATCAGG+AGG 0.657956 7.1:-40593560 None:intergenic
TCCTGCTGGATACGTCATTG+AGG 0.658697 7.1:-40593502 None:intergenic
TTCAGACTATGTCTTTGACA+CGG 0.659344 7.1:+40595509 MS.gene055308:CDS
AGGATAGTGGACATTGCCAA+CGG 0.676034 7.1:-40593251 None:intergenic
TTACCTTGGAAACTGAAATG+GGG 0.684729 7.1:-40591864 None:intergenic
TATATTGCAGGACTCTCTAG+GGG 0.686018 7.1:+40593850 MS.gene055308:CDS
TTACCAGGCAGGCAACCATG+AGG 0.691053 7.1:-40593886 None:intergenic
AAGCTCAACATACTACTGAG+AGG 0.692590 7.1:+40594613 MS.gene055308:CDS
ATTTCTAAAAGAGACACCAA+AGG 0.694450 7.1:-40594730 None:intergenic
GATGGCCATATTCACCTCAG+GGG 0.723977 7.1:+40593392 MS.gene055308:CDS
ATATTGCAGGACTCTCTAGG+GGG 0.730181 7.1:+40593851 MS.gene055308:CDS
GAACTTGAGATAGTCCCCTG+AGG 0.791662 7.1:-40593406 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTATTGAATTTTTAGTATT+TGG + chr7.1:40592526-40592545 MS.gene055308:intron 10.0%
!! ATTCGATATTATAAAGAAAA+TGG + chr7.1:40595114-40595133 MS.gene055308:intron 15.0%
!! GATCATTGAAAATAAAATTA+TGG + chr7.1:40594648-40594667 MS.gene055308:intron 15.0%
!! TTAAAAATTAAACAGTGTTA+AGG - chr7.1:40595828-40595847 None:intergenic 15.0%
!!! AATATTAAATTTTCATGCAT+TGG + chr7.1:40594915-40594934 MS.gene055308:intron 15.0%
!!! AATTTTTGACAAAATTAAAG+TGG - chr7.1:40596082-40596101 None:intergenic 15.0%
!!! ATATACTCTGATTTTTTAAA+AGG + chr7.1:40594184-40594203 MS.gene055308:intron 15.0%
!!! CAATTTTGTTAATTTGTTTT+TGG + chr7.1:40592365-40592384 MS.gene055308:intron 15.0%
!!! TTAGTTAAGTTATTGAATTT+TGG + chr7.1:40592101-40592120 MS.gene055308:intron 15.0%
!! AAAAATAGATTATGTGAGAA+AGG - chr7.1:40595677-40595696 None:intergenic 20.0%
!! AAACTAATCAGAATTAATAG+GGG - chr7.1:40594066-40594085 None:intergenic 20.0%
!! AAACTGCTAAAAAATTAAAC+AGG - chr7.1:40593154-40593173 None:intergenic 20.0%
!! AAATTCAATAAATCTACCAA+AGG - chr7.1:40592518-40592537 None:intergenic 20.0%
!! CATAACTTCTAAATTATACT+CGG + chr7.1:40595783-40595802 MS.gene055308:intron 20.0%
!! GAAACTAATCAGAATTAATA+GGG - chr7.1:40594067-40594086 None:intergenic 20.0%
!!! AATTGAATTTTTTTGAAACC+TGG - chr7.1:40592028-40592047 None:intergenic 20.0%
!!! CTTTTAGTGATACATTTTTT+TGG + chr7.1:40596410-40596429 MS.gene055308:intron 20.0%
!!! TCTTTTAGAAATTTACTAGA+TGG + chr7.1:40594741-40594760 MS.gene055308:CDS 20.0%
!!! TGAATTTTGGTTTTTGATTT+TGG + chr7.1:40592114-40592133 MS.gene055308:intron 20.0%
!!! TTATTTTCAATCCTCATTTT+TGG - chr7.1:40593079-40593098 None:intergenic 20.0%
!!! TTCTTCATTTTCTAATACTT+GGG + chr7.1:40596244-40596263 MS.gene055308:intron 20.0%
!!! TTTAATTTTTAAATGCAGAG+AGG + chr7.1:40595836-40595855 MS.gene055308:intron 20.0%
!!! TTTCTTCATTTTCTAATACT+TGG + chr7.1:40596243-40596262 MS.gene055308:intron 20.0%
!!! TTTGATTTTGGTTTTTTAGT+CGG + chr7.1:40592126-40592145 MS.gene055308:intron 20.0%
!!! TTTTAACTTCACTAACAAAA+TGG + chr7.1:40595638-40595657 MS.gene055308:intron 20.0%
!!! TTTTTCCTCTCATTTAATAT+TGG + chr7.1:40593928-40593947 MS.gene055308:intron 20.0%
! AACAATTATGTGATTATGTG+AGG + chr7.1:40592470-40592489 MS.gene055308:intron 25.0%
! ACAAAGTGAAAATAATGTGA+TGG - chr7.1:40596163-40596182 None:intergenic 25.0%
! ACAATTATGTGATTATGTGA+GGG + chr7.1:40592471-40592490 MS.gene055308:intron 25.0%
! ACAGTTGGATAAATATGAAA+CGG + chr7.1:40595188-40595207 MS.gene055308:intron 25.0%
! AGAAGTTATGCAAAATACAA+GGG - chr7.1:40595773-40595792 None:intergenic 25.0%
! ATACATTATTGCACTAGATA+AGG - chr7.1:40592720-40592739 None:intergenic 25.0%
! ATCAGAGTATATATTAGATC+TGG - chr7.1:40594176-40594195 None:intergenic 25.0%
! ATGAACCAATATTAAATGAG+AGG - chr7.1:40593936-40593955 None:intergenic 25.0%
! CAATATCAAGAATTCAAAAG+TGG - chr7.1:40593107-40593126 None:intergenic 25.0%
! CATTATTGCACTATTCTTTA+GGG + chr7.1:40595941-40595960 MS.gene055308:intron 25.0%
! CGAAACTAATCAGAATTAAT+AGG - chr7.1:40594068-40594087 None:intergenic 25.0%
! GGATAGAAAAACAAATATCT+AGG + chr7.1:40594143-40594162 MS.gene055308:intron 25.0%
! TAGAAGTTATGCAAAATACA+AGG - chr7.1:40595774-40595793 None:intergenic 25.0%
! TCATTATTGCACTATTCTTT+AGG + chr7.1:40595940-40595959 MS.gene055308:intron 25.0%
! TTAGTGAAGTTAAAACAACT+AGG - chr7.1:40595633-40595652 None:intergenic 25.0%
! TTATCTAGTGCAATAATGTA+TGG + chr7.1:40592719-40592738 MS.gene055308:intron 25.0%
!! ATAAAACTTATAGCTTTACC+AGG - chr7.1:40593904-40593923 None:intergenic 25.0%
!! ATAAACTGCTACATCATTTT+GGG - chr7.1:40591989-40592008 None:intergenic 25.0%
!! ATTGCAATGATTTTATCTCA+AGG + chr7.1:40592898-40592917 MS.gene055308:intron 25.0%
!! ATTTGTTAAATAATGCAAGC+AGG + chr7.1:40595734-40595753 MS.gene055308:CDS 25.0%
!! CACATACATTGATTAATACA+TGG + chr7.1:40595337-40595356 MS.gene055308:intron 25.0%
!! CACTTTTGAATTCTTGATAT+TGG + chr7.1:40593105-40593124 MS.gene055308:intron 25.0%
!! CTTTTCTGAATATGGTAAAA+CGG + chr7.1:40592632-40592651 MS.gene055308:intron 25.0%
!! TGGTTATACTTTTCTGAATA+TGG + chr7.1:40592624-40592643 MS.gene055308:intron 25.0%
!!! AAAATAATGTGATGGATGTT+TGG - chr7.1:40596155-40596174 None:intergenic 25.0%
!!! AATTTGTTTTTGGTATATGC+AGG + chr7.1:40592375-40592394 MS.gene055308:intron 25.0%
!!! ATTCTGAAATCACACATAAA+GGG - chr7.1:40594298-40594317 None:intergenic 25.0%
!!! CTCATTTAATATTGGTTCAT+TGG + chr7.1:40593936-40593955 MS.gene055308:intron 25.0%
!!! TTGTTATTGTTAGAGGTTTT+TGG - chr7.1:40591844-40591863 None:intergenic 25.0%
!!! TTTATACTAACCGATTTTAG+TGG - chr7.1:40596344-40596363 None:intergenic 25.0%
AAAAGTGAGATACAAGAAAC+TGG - chr7.1:40591949-40591968 None:intergenic 30.0%
AAAGTGAGATACAAGAAACT+GGG - chr7.1:40591948-40591967 None:intergenic 30.0%
AACTCTAATGGTATTAATGC+CGG + chr7.1:40592800-40592819 MS.gene055308:intron 30.0%
AATCAGTAAATCGAAACTGT+TGG - chr7.1:40595281-40595300 None:intergenic 30.0%
AATGATTTCTCAGACCAAAA+TGG - chr7.1:40595968-40595987 None:intergenic 30.0%
AATTCGGACATTGTATTTAC+AGG - chr7.1:40593431-40593450 None:intergenic 30.0%
AATTCTCTTGGTCATTCTAA+TGG - chr7.1:40594027-40594046 None:intergenic 30.0%
ACATCCCTAATATACGATTA+GGG - chr7.1:40592970-40592989 None:intergenic 30.0%
AGAAGAAAGTCCACTAAAAT+CGG + chr7.1:40596331-40596350 MS.gene055308:CDS 30.0%
AGCTCAAATTTCATACTATG+AGG + chr7.1:40593301-40593320 MS.gene055308:CDS 30.0%
ATAGGTTGTACAAACTCTAA+TGG + chr7.1:40592788-40592807 MS.gene055308:intron 30.0%
ATCTGTTCATACTGTTAGTT+TGG + chr7.1:40594335-40594354 MS.gene055308:CDS 30.0%
ATTAGAGTTTGTACAACCTA+TGG - chr7.1:40592789-40592808 None:intergenic 30.0%
GAATCATATAATGATGTACC+TGG + chr7.1:40595054-40595073 MS.gene055308:CDS 30.0%
GATAAAGAGACTATTCAAAC+TGG - chr7.1:40595910-40595929 None:intergenic 30.0%
TACATCCCTAATATACGATT+AGG - chr7.1:40592971-40592990 None:intergenic 30.0%
TAGAAGTGAGAAAAACTCTA+GGG - chr7.1:40593026-40593045 None:intergenic 30.0%
TAGTTGAAATAAACGATGCT+TGG + chr7.1:40593193-40593212 MS.gene055308:intron 30.0%
TATAACCATAACCTATGTCA+TGG - chr7.1:40592612-40592631 None:intergenic 30.0%
TATGAAACGGTTCATATTTC+TGG + chr7.1:40595201-40595220 MS.gene055308:intron 30.0%
TCAATAAATCTACCAAAGGT+GGG - chr7.1:40592514-40592533 None:intergenic 30.0%
TCAATCATTGTATTCCTTCA+GGG + chr7.1:40596269-40596288 MS.gene055308:intron 30.0%
TCATATTTATCCAACTGTTC+TGG - chr7.1:40595186-40595205 None:intergenic 30.0%
TGAACCCTAATCGTATATTA+GGG + chr7.1:40592963-40592982 MS.gene055308:intron 30.0%
TTCAATAAATCTACCAAAGG+TGG - chr7.1:40592515-40592534 None:intergenic 30.0%
TTCAATCATTGTATTCCTTC+AGG + chr7.1:40596268-40596287 MS.gene055308:intron 30.0%
TTCCTATACTACCAAAAATG+AGG + chr7.1:40593065-40593084 MS.gene055308:intron 30.0%
TTGAATACCATTGATGTTGA+CGG - chr7.1:40595482-40595501 None:intergenic 30.0%
TTTAACCATGACATAGGTTA+TGG + chr7.1:40592604-40592623 MS.gene055308:intron 30.0%
! AAATGTAAGTTTGAGTTCAG+AGG + chr7.1:40592553-40592572 MS.gene055308:intron 30.0%
! AATGTAAGTTTGAGTTCAGA+GGG + chr7.1:40592554-40592573 MS.gene055308:intron 30.0%
! AGGCATTATCAAAAAGTACA+AGG + chr7.1:40594873-40594892 MS.gene055308:intron 30.0%
! ATTTCTAAAAGAGACACCAA+AGG - chr7.1:40594733-40594752 None:intergenic 30.0%
! GATAAACTGCTACATCATTT+TGG - chr7.1:40591990-40592009 None:intergenic 30.0%
! TCTAACTTGTACTACTTGTT+TGG + chr7.1:40596559-40596578 MS.gene055308:intron 30.0%
! TTCTTGTTTAACCATGACAT+AGG + chr7.1:40592598-40592617 MS.gene055308:intron 30.0%
!! GATTCTGAAATCACACATAA+AGG - chr7.1:40594299-40594318 None:intergenic 30.0%
!! TGCTTTTGATTCTTGCAAAA+AGG + chr7.1:40594770-40594789 MS.gene055308:CDS 30.0%
!! TTATTGTTAGAGGTTTTTGG+TGG - chr7.1:40591841-40591860 None:intergenic 30.0%
!!! ATCCTCATTTTTGGTAGTAT+AGG - chr7.1:40593070-40593089 None:intergenic 30.0%
!!! TATTGTTAGAGGTTTTTGGT+GGG - chr7.1:40591840-40591859 None:intergenic 30.0%
!!! TTTTTTGAAACCTGGTAAGT+GGG - chr7.1:40592020-40592039 None:intergenic 30.0%
!!! TTTTTTTGAAACCTGGTAAG+TGG - chr7.1:40592021-40592040 None:intergenic 30.0%
AAAACAACCATGTGCATGTT+TGG + chr7.1:40596024-40596043 MS.gene055308:intron 35.0%
AAAACTGAACCTCATAGACT+TGG + chr7.1:40593592-40593611 MS.gene055308:CDS 35.0%
AAGAAAGGGTTTCAGGAAAA+TGG + chr7.1:40595559-40595578 MS.gene055308:CDS 35.0%
AAGCTAAGATGCAATTCTCT+TGG - chr7.1:40594039-40594058 None:intergenic 35.0%
AATGCTACTGTGTTTGCTTA+TGG + chr7.1:40592257-40592276 MS.gene055308:CDS 35.0%
ACTAGTTATGACACGAGTAA+TGG - chr7.1:40594233-40594252 None:intergenic 35.0%
ACTTTCAATAGCTCAGTGAA+GGG + chr7.1:40594567-40594586 MS.gene055308:CDS 35.0%
AGAGGAGTTACTAGAGTTAA+AGG + chr7.1:40595854-40595873 MS.gene055308:CDS 35.0%
ATACTACTGAGAGGTAACTA+TGG + chr7.1:40594622-40594641 MS.gene055308:intron 35.0%
ATCGAATAAATGCAAAGTGC+AGG - chr7.1:40595101-40595120 None:intergenic 35.0%
ATTCAAACTGGACATTCATG+TGG - chr7.1:40595898-40595917 None:intergenic 35.0%
ATTTATCCAACTGTTCTGGT+TGG - chr7.1:40595182-40595201 None:intergenic 35.0%
CAATGTATGTGACCATAGTT+CGG - chr7.1:40595328-40595347 None:intergenic 35.0%
CAGGTAATGAAGACAATAGA+AGG + chr7.1:40593696-40593715 MS.gene055308:intron 35.0%
CATAAACTAGAGACACCAAA+AGG + chr7.1:40594399-40594418 MS.gene055308:CDS 35.0%
CATTTCAGTTTCCAAGGTAA+GGG + chr7.1:40591867-40591886 MS.gene055308:intron 35.0%
CCACTAATACTGAAAAAGAC+AGG + chr7.1:40594853-40594872 MS.gene055308:intron 35.0%
CTGAACCCTAATCGTATATT+AGG + chr7.1:40592962-40592981 MS.gene055308:intron 35.0%
CTGTCTATTTGTCAAAACAC+TGG + chr7.1:40593272-40593291 MS.gene055308:CDS 35.0%
CTTACCTTGGAAACTGAAAT+GGG - chr7.1:40591868-40591887 None:intergenic 35.0%
GATCAAGAGGATAACAATGT+GGG + chr7.1:40592179-40592198 MS.gene055308:intron 35.0%
GCAATAATGTATGGATCCTT+TGG + chr7.1:40592728-40592747 MS.gene055308:intron 35.0%
GGATTCTTTCTTTGATCAAG+AGG + chr7.1:40592166-40592185 MS.gene055308:intron 35.0%
GTAGAAGTGAGAAAAACTCT+AGG - chr7.1:40593027-40593046 None:intergenic 35.0%
GTTTGATGTATTCCAAGCAA+CGG + chr7.1:40593646-40593665 MS.gene055308:intron 35.0%
TACAATGTCCGAATTTCAAG+AGG + chr7.1:40593436-40593455 MS.gene055308:CDS 35.0%
TACTTTCAATAGCTCAGTGA+AGG + chr7.1:40594566-40594585 MS.gene055308:CDS 35.0%
TATGTGTGATTTCAGAATCC+AGG + chr7.1:40594300-40594319 MS.gene055308:intron 35.0%
TCAAAGACATAGTCTGAAGA+TGG - chr7.1:40595507-40595526 None:intergenic 35.0%
TCGAATAAATGCAAAGTGCA+GGG - chr7.1:40595100-40595119 None:intergenic 35.0%
TGAATACCATTGATGTTGAC+GGG - chr7.1:40595481-40595500 None:intergenic 35.0%
TGATCAAGAGGATAACAATG+TGG + chr7.1:40592178-40592197 MS.gene055308:intron 35.0%
TGGAAAGACATATACTATGC+AGG + chr7.1:40592292-40592311 MS.gene055308:CDS 35.0%
TTAAGTGACCTGGAGAAAAT+TGG + chr7.1:40596443-40596462 MS.gene055308:CDS 35.0%
TTACCTTGGAAACTGAAATG+GGG - chr7.1:40591867-40591886 None:intergenic 35.0%
TTACTCGTGTCATAACTAGT+CGG + chr7.1:40594233-40594252 MS.gene055308:intron 35.0%
TTCAGACTATGTCTTTGACA+CGG + chr7.1:40595509-40595528 MS.gene055308:CDS 35.0%
TTCATACTATGAGGTCTACA+TGG + chr7.1:40593310-40593329 MS.gene055308:CDS 35.0%
TTCCAATGTCTAGTCTAATG+CGG - chr7.1:40594109-40594128 None:intergenic 35.0%
TTCTAGCCAAGCTTTCAATT+TGG - chr7.1:40594442-40594461 None:intergenic 35.0%
TTGACAAATAGACAGGATAG+TGG - chr7.1:40593267-40593286 None:intergenic 35.0%
TTTCTCTTACTGTGTAAGCA+GGG + chr7.1:40594707-40594726 MS.gene055308:intron 35.0%
! AATGGGGTTGTTATTGTTAG+AGG - chr7.1:40591851-40591870 None:intergenic 35.0%
! AGCAAGTGAGATTTCAGTTT+TGG + chr7.1:40593361-40593380 MS.gene055308:CDS 35.0%
! ATGATTTTATCTCAAGGTGC+TGG + chr7.1:40592904-40592923 MS.gene055308:intron 35.0%
! CAGTAGTATGTTGAGCTTTT+TGG - chr7.1:40594611-40594630 None:intergenic 35.0%
! GCTTCATAAGATGTAGCTTT+TGG + chr7.1:40592931-40592950 MS.gene055308:intron 35.0%
! TAGAGTTAAAGGTACATGCA+CGG + chr7.1:40595865-40595884 MS.gene055308:intron 35.0%
! TTTTCTCTTACTGTGTAAGC+AGG + chr7.1:40594706-40594725 MS.gene055308:intron 35.0%
!! AATGCGTTTAAAGTTGATGC+AGG + chr7.1:40593677-40593696 MS.gene055308:intron 35.0%
!! CACTTGCTTTTAACTCTAAG+AGG - chr7.1:40593349-40593368 None:intergenic 35.0%
!! TTTCTAGCAATTTTGGTGGA+AGG + chr7.1:40592841-40592860 MS.gene055308:intron 35.0%
!! TTTTTGCAGCTTTAGTGAAC+AGG - chr7.1:40596596-40596615 None:intergenic 35.0%
!!! AAGATGTAGCTTTTGGAGTT+TGG + chr7.1:40592938-40592957 MS.gene055308:intron 35.0%
!!! AGCATTTCTAGCAATTTTGG+TGG + chr7.1:40592837-40592856 MS.gene055308:intron 35.0%
!!! ATTGTTAGAGGTTTTTGGTG+GGG - chr7.1:40591839-40591858 None:intergenic 35.0%
!!! CAGTGTTTTGACAAATAGAC+AGG - chr7.1:40593274-40593293 None:intergenic 35.0%
!!! CCTGTCTTTTTCAGTATTAG+TGG - chr7.1:40594856-40594875 None:intergenic 35.0%
!!! CTATTCTTTAGGGTCCATTT+TGG + chr7.1:40595951-40595970 MS.gene055308:intron 35.0%
!!! GAGAGCATTTCTAGCAATTT+TGG + chr7.1:40592834-40592853 MS.gene055308:intron 35.0%
!!! TCAGTTTTGGATGACAAAGA+TGG + chr7.1:40593374-40593393 MS.gene055308:CDS 35.0%
AAAGCTTGGCTAGAATCAAG+AGG + chr7.1:40594447-40594466 MS.gene055308:CDS 40.0%
AAGAGCTCACAACAAAGACT+TGG + chr7.1:40594477-40594496 MS.gene055308:CDS 40.0%
AAGCTCAACATACTACTGAG+AGG + chr7.1:40594613-40594632 MS.gene055308:CDS 40.0%
AATAGAAGGAGCTGCAATGA+AGG + chr7.1:40593710-40593729 MS.gene055308:CDS 40.0%
ACAAACCAAGAACACCCTAT+AGG + chr7.1:40593810-40593829 MS.gene055308:CDS 40.0%
ACAGATTCCTGATATTCTCC+TGG - chr7.1:40594321-40594340 None:intergenic 40.0%
ACAGGCACATAAAAACAACC+AGG - chr7.1:40593136-40593155 None:intergenic 40.0%
ACCAAAAGGTAACGTTGACA+TGG + chr7.1:40594413-40594432 MS.gene055308:CDS 40.0%
ACTTGTACTACTTGTTTGGC+AGG + chr7.1:40596563-40596582 MS.gene055308:intron 40.0%
AGAAGTTAGTCCGATGATAC+CGG + chr7.1:40592217-40592236 MS.gene055308:CDS 40.0%
ATAGAAGGAGCTGCAATGAA+GGG + chr7.1:40593711-40593730 MS.gene055308:CDS 40.0%
ATGACAAGAAAGAGCTTGAG+GGG + chr7.1:40593970-40593989 MS.gene055308:intron 40.0%
ATGCTCTCTTCATTTACCAC+CGG - chr7.1:40592822-40592841 None:intergenic 40.0%
ATTGGAAACGTCAACAACTG+TGG + chr7.1:40594122-40594141 MS.gene055308:intron 40.0%
ATTGTATTCCTTCAGGGCAT+AGG + chr7.1:40596275-40596294 MS.gene055308:intron 40.0%
CAAACCAAGAACACCCTATA+GGG + chr7.1:40593811-40593830 MS.gene055308:CDS 40.0%
CAAATTGACCCGTATATTGC+AGG + chr7.1:40593838-40593857 MS.gene055308:CDS 40.0%
CAAGGTAAGGGTCATAGTTA+GGG + chr7.1:40591879-40591898 MS.gene055308:intron 40.0%
CACACAAGTAATGACATACC+AGG - chr7.1:40595075-40595094 None:intergenic 40.0%
CACATTTGACAGTGCAAACA+AGG - chr7.1:40593771-40593790 None:intergenic 40.0%
CATGACAAGAAAGAGCTTGA+GGG + chr7.1:40593969-40593988 MS.gene055308:intron 40.0%
CCATTTCAGTTTCCAAGGTA+AGG + chr7.1:40591866-40591885 MS.gene055308:intron 40.0%
CCTTACCTTGGAAACTGAAA+TGG - chr7.1:40591869-40591888 None:intergenic 40.0%
CGATGAGATTGGAAGAATCA+CGG + chr7.1:40596052-40596071 MS.gene055308:intron 40.0%
CTAGAGAGTCCTGCAATATA+CGG - chr7.1:40593850-40593869 None:intergenic 40.0%
GCTATGTAGAACATGCATTC+TGG + chr7.1:40594976-40594995 MS.gene055308:intron 40.0%
GCTGGTACATCTTTGCTTAA+GGG - chr7.1:40595424-40595443 None:intergenic 40.0%
GGAGAAGACCTCTTGAAATT+CGG - chr7.1:40593447-40593466 None:intergenic 40.0%
GGGGGTGATATATAAGTTGT+AGG + chr7.1:40593989-40594008 MS.gene055308:intron 40.0%
GTAATTGCATTCACCGTAGT+TGG + chr7.1:40595156-40595175 MS.gene055308:intron 40.0%
GTATATTGCAGGACTCTCTA+GGG + chr7.1:40593849-40593868 MS.gene055308:CDS 40.0%
GTTTGGATTGACGATGAGAT+TGG + chr7.1:40596041-40596060 MS.gene055308:intron 40.0%
TAGAGAGTCCTGCAATATAC+GGG - chr7.1:40593849-40593868 None:intergenic 40.0%
TATATTGCAGGACTCTCTAG+GGG + chr7.1:40593850-40593869 MS.gene055308:CDS 40.0%
TATTAGGGATGTAGTAGCTG+TGG + chr7.1:40592978-40592997 MS.gene055308:intron 40.0%
TCAGAATCCAGGAGAATATC+AGG + chr7.1:40594311-40594330 MS.gene055308:intron 40.0%
TCCAATGTCTAGTCTAATGC+GGG - chr7.1:40594108-40594127 None:intergenic 40.0%
TCCTTTGGCTATGCACAATT+TGG + chr7.1:40592743-40592762 MS.gene055308:intron 40.0%
TCGGAATGAGTGTTACAAGT+TGG + chr7.1:40592145-40592164 MS.gene055308:intron 40.0%
TCTAATGGTATTAATGCCGG+TGG + chr7.1:40592803-40592822 MS.gene055308:intron 40.0%
TGATTCCAATGCTGCCTTAT+TGG - chr7.1:40595040-40595059 None:intergenic 40.0%
TGCAAGAAGTTCTGCTTTGA+AGG + chr7.1:40595603-40595622 MS.gene055308:CDS 40.0%
TGCTGGTACATCTTTGCTTA+AGG - chr7.1:40595425-40595444 None:intergenic 40.0%
TGGAAGCCAAATTGAAAGCT+TGG + chr7.1:40594433-40594452 MS.gene055308:CDS 40.0%
TGGGTCATCACAATTTCTTG+TGG - chr7.1:40591929-40591948 None:intergenic 40.0%
TGGTACTATGATCCGAACTA+TGG + chr7.1:40595313-40595332 MS.gene055308:intron 40.0%
TGTAGTAGCTGTGGTGTAAT+TGG + chr7.1:40592987-40593006 MS.gene055308:intron 40.0%
TTACATCCACCGAAAATAGC+CGG - chr7.1:40592239-40592258 None:intergenic 40.0%
TTCCTGAAACCCTTTCTTAG+TGG - chr7.1:40595557-40595576 None:intergenic 40.0%
! AACTTATAGCTTTACCAGGC+AGG - chr7.1:40593900-40593919 None:intergenic 40.0%
! AAGACAGACCAATTTTCTCC+AGG - chr7.1:40596454-40596473 None:intergenic 40.0%
! AATGGACTTTGTAGTACTGC+TGG - chr7.1:40595442-40595461 None:intergenic 40.0%
! ACTCTAAGAGGTCGTAACAT+CGG - chr7.1:40593337-40593356 None:intergenic 40.0%
! GGAGAGAGAGCTTTTCTTAA+TGG - chr7.1:40595460-40595479 None:intergenic 40.0%
! GTCTCTAGTTTATGAGCTGA+AGG - chr7.1:40594393-40594412 None:intergenic 40.0%
! TACTGATTGCGATGAATGTG+TGG + chr7.1:40595293-40595312 MS.gene055308:intron 40.0%
! TCCATGTCAACGTTACCTTT+TGG - chr7.1:40594417-40594436 None:intergenic 40.0%
! TGTTAAGGCACCTTGAAAGA+AGG - chr7.1:40595813-40595832 None:intergenic 40.0%
!! AAACGATGCTTGGTGTTTCA+GGG + chr7.1:40593203-40593222 MS.gene055308:intron 40.0%
!! AATTGGTCTGTCTTTGAAGC+AGG + chr7.1:40596460-40596479 MS.gene055308:CDS 40.0%
!! GTCAATTTGCTGTCCCTATA+GGG - chr7.1:40593827-40593846 None:intergenic 40.0%
!! TAAACGATGCTTGGTGTTTC+AGG + chr7.1:40593202-40593221 MS.gene055308:intron 40.0%
!! TTAGTGGACTTTCTTCTCTG+AGG - chr7.1:40596328-40596347 None:intergenic 40.0%
!! TTCTTGATATTGGTAGTGCC+TGG + chr7.1:40593115-40593134 MS.gene055308:intron 40.0%
AAACCCTTTCTTAGTGGAGC+AGG - chr7.1:40595551-40595570 None:intergenic 45.0%
AAAGTGAACGAACCCACCTT+TGG + chr7.1:40592499-40592518 MS.gene055308:intron 45.0%
AACCCATTACCCCAATTGAG+TGG - chr7.1:40593629-40593648 None:intergenic 45.0%
AAGATGGCCATATTCACCTC+AGG + chr7.1:40593390-40593409 MS.gene055308:CDS 45.0%
AATGTCTAGTCTAATGCGGG+TGG - chr7.1:40594105-40594124 None:intergenic 45.0%
ACAAGACTTCCATTCCCATC+AGG - chr7.1:40593566-40593585 None:intergenic 45.0%
ACCCGCATTAGACTAGACAT+TGG + chr7.1:40594104-40594123 MS.gene055308:intron 45.0%
AGATGGCCATATTCACCTCA+GGG + chr7.1:40593391-40593410 MS.gene055308:CDS 45.0%
AGGTTACCGTCCACTCAATT+GGG + chr7.1:40593616-40593635 MS.gene055308:intron 45.0%
AGTAACTGATCTCCTAGCAG+AGG - chr7.1:40594550-40594569 None:intergenic 45.0%
ATAGTCCCCTGAGGTGAATA+TGG - chr7.1:40593400-40593419 None:intergenic 45.0%
ATATTGCAGGACTCTCTAGG+GGG + chr7.1:40593851-40593870 MS.gene055308:CDS 45.0%
ATCTCAAAGACCCACTTACC+AGG + chr7.1:40592007-40592026 MS.gene055308:intron 45.0%
CAACCCCATTTCAGTTTCCA+AGG + chr7.1:40591861-40591880 MS.gene055308:CDS 45.0%
CAACCTGCTCCACTAAGAAA+GGG + chr7.1:40595545-40595564 MS.gene055308:CDS 45.0%
CATGTTGCAGTTAAGTGACC+TGG + chr7.1:40596433-40596452 MS.gene055308:intron 45.0%
CATTACCCCAATTGAGTGGA+CGG - chr7.1:40593625-40593644 None:intergenic 45.0%
CATTATGTCCTTCCGTTGCT+TGG - chr7.1:40593661-40593680 None:intergenic 45.0%
CCAAGGTAAGGGTCATAGTT+AGG + chr7.1:40591878-40591897 MS.gene055308:intron 45.0%
CCAGTTGTGCAAAAAACTCC+TGG + chr7.1:40594513-40594532 MS.gene055308:CDS 45.0%
CCGAAAATAGCCGGTATCAT+CGG - chr7.1:40592230-40592249 None:intergenic 45.0%
CCTAACTATGACCCTTACCT+TGG - chr7.1:40591881-40591900 None:intergenic 45.0%
CGTATATTGCAGGACTCTCT+AGG + chr7.1:40593848-40593867 MS.gene055308:CDS 45.0%
CGTCAATCCAAACATGCACA+TGG - chr7.1:40596034-40596053 None:intergenic 45.0%
CTCCACTAAGAAAGGGTTTC+AGG + chr7.1:40595552-40595571 MS.gene055308:CDS 45.0%
CTTGCACTGAATTTGTCCAG+TGG - chr7.1:40595589-40595608 None:intergenic 45.0%
GATGTATTCCAAGCAACGGA+AGG + chr7.1:40593650-40593669 MS.gene055308:intron 45.0%
GCATGACAAGAAAGAGCTTG+AGG + chr7.1:40593968-40593987 MS.gene055308:intron 45.0%
GCCAAATTGTGCATAGCCAA+AGG - chr7.1:40592747-40592766 None:intergenic 45.0%
GCTCAGATGGTTATAGCCAT+AGG + chr7.1:40592770-40592789 MS.gene055308:intron 45.0%
GTCCACTCAATTGGGGTAAT+GGG + chr7.1:40593624-40593643 MS.gene055308:intron 45.0%
GTTTGGATGAGCAGTGAGTT+TGG - chr7.1:40596138-40596157 None:intergenic 45.0%
TAAGAGAGAGACTGAGCATG+AGG + chr7.1:40595014-40595033 MS.gene055308:CDS 45.0%
TCAGGGCATAGGAGACAAAA+TGG + chr7.1:40596286-40596305 MS.gene055308:intron 45.0%
TCTTCTCCAGTGGTATTCAG+AGG + chr7.1:40593459-40593478 MS.gene055308:CDS 45.0%
TGACAAGAAAGAGCTTGAGG+GGG + chr7.1:40593971-40593990 MS.gene055308:intron 45.0%
TGAGTGAGTGTCACAAGTGA+AGG + chr7.1:40594793-40594812 MS.gene055308:intron 45.0%
TGATCTCCTAGCAGAGGTAA+TGG - chr7.1:40594544-40594563 None:intergenic 45.0%
TTCAATAGCTCAGTGAAGGG+TGG + chr7.1:40594570-40594589 MS.gene055308:CDS 45.0%
TTCTTGTGGTTTCGTGAGAG+AGG - chr7.1:40591915-40591934 None:intergenic 45.0%
TTTCAAGAGGTCTTCTCCAG+TGG + chr7.1:40593449-40593468 MS.gene055308:CDS 45.0%
! ACAATTTGGCTCAGCTCAGA+TGG + chr7.1:40592757-40592776 MS.gene055308:intron 45.0%
! GAACATGCATTCTGGTGTTG+AGG + chr7.1:40594984-40595003 MS.gene055308:intron 45.0%
! GGGAATGGAAGTCTTGTATG+TGG + chr7.1:40593569-40593588 MS.gene055308:CDS 45.0%
! GTAAGTTTGAGTTCAGAGGG+TGG + chr7.1:40592557-40592576 MS.gene055308:intron 45.0%
! TTAGTTTGGCTGCTCGATCA+AGG + chr7.1:40594349-40594368 MS.gene055308:CDS 45.0%
! TTTTGTCTCCTATGCCCTGA+AGG - chr7.1:40596286-40596305 None:intergenic 45.0%
!! AGGATAGTGGACATTGCCAA+CGG - chr7.1:40593254-40593273 None:intergenic 45.0%
!! ATGATACCGGCTATTTTCGG+TGG + chr7.1:40592230-40592249 MS.gene055308:CDS 45.0%
!! CCGATGATACCGGCTATTTT+CGG + chr7.1:40592227-40592246 MS.gene055308:CDS 45.0%
!! CTAGCAATTTTGGTGGAAGG+AGG + chr7.1:40592844-40592863 MS.gene055308:intron 45.0%
!! GGTCAATTTGCTGTCCCTAT+AGG - chr7.1:40593828-40593847 None:intergenic 45.0%
!! GTGTTTGCTTATGGTGCTAC+TGG + chr7.1:40592266-40592285 MS.gene055308:CDS 45.0%
!! TACTATCGACTCCTCCTGAT+GGG + chr7.1:40593549-40593568 MS.gene055308:CDS 45.0%
!!! CCAGGAGTTTTTTGCACAAC+TGG - chr7.1:40594516-40594535 None:intergenic 45.0%
AGACTTCCATTCCCATCAGG+AGG - chr7.1:40593563-40593582 None:intergenic 50.0%
AGTTGGCCAACCAGAACAGT+TGG + chr7.1:40595173-40595192 MS.gene055308:intron 50.0%
CAGGGAACTGAAGAACAACC+TGG + chr7.1:40593221-40593240 MS.gene055308:intron 50.0%
CAGGTTACCGTCCACTCAAT+TGG + chr7.1:40593615-40593634 MS.gene055308:intron 50.0%
CGTCCACTCAATTGGGGTAA+TGG + chr7.1:40593623-40593642 MS.gene055308:intron 50.0%
CTCTCTCCCGTCAACATCAA+TGG + chr7.1:40595472-40595491 MS.gene055308:CDS 50.0%
CTGAACCTCATAGACTTGGC+AGG + chr7.1:40593596-40593615 MS.gene055308:CDS 50.0%
GAACTTGAGATAGTCCCCTG+AGG - chr7.1:40593409-40593428 None:intergenic 50.0%
GACTGAGCATGAGGCCAATA+AGG + chr7.1:40595023-40595042 MS.gene055308:CDS 50.0%
GATGGCCATATTCACCTCAG+GGG + chr7.1:40593392-40593411 MS.gene055308:CDS 50.0%
GCAACCTGCTCCACTAAGAA+AGG + chr7.1:40595544-40595563 MS.gene055308:CDS 50.0%
GGTAACCTGCCAAGTCTATG+AGG - chr7.1:40593604-40593623 None:intergenic 50.0%
GGTTACCGTCCACTCAATTG+GGG + chr7.1:40593617-40593636 MS.gene055308:intron 50.0%
GTGGAGCAGGTTGCAGAAAA+AGG - chr7.1:40595538-40595557 None:intergenic 50.0%
GTGGTTTCGTGAGAGAGGAA+GGG - chr7.1:40591910-40591929 None:intergenic 50.0%
GTTCCACCATTACCTCTGCT+AGG + chr7.1:40594535-40594554 MS.gene055308:CDS 50.0%
TACTGTGTAAGCAGGGCCTT+TGG + chr7.1:40594714-40594733 MS.gene055308:intron 50.0%
TCAGGAAAATGGCACTCCAC+TGG + chr7.1:40595570-40595589 MS.gene055308:CDS 50.0%
TCCTGCTGGATACGTCATTG+AGG - chr7.1:40593505-40593524 None:intergenic 50.0%
TGAGGCCAATAAGGCAGCAT+TGG + chr7.1:40595032-40595051 MS.gene055308:CDS 50.0%
TGTGGTTTCGTGAGAGAGGA+AGG - chr7.1:40591911-40591930 None:intergenic 50.0%
TTTGCGCCTCTGAATACCAC+TGG - chr7.1:40593468-40593487 None:intergenic 50.0%
! CTGTCCCTATAGGGTGTTCT+TGG - chr7.1:40593818-40593837 None:intergenic 50.0%
! CTGTTCTGGTTGGCCAACTA+CGG - chr7.1:40595172-40595191 None:intergenic 50.0%
! TCTCCTAGCAGAGGTAATGG+TGG - chr7.1:40594541-40594560 None:intergenic 50.0%
! TTTGAGTTCAGAGGGTGGTG+AGG + chr7.1:40592562-40592581 MS.gene055308:intron 50.0%
!! GCTTATGGTGCTACTGGTAG+TGG + chr7.1:40592272-40592291 MS.gene055308:CDS 50.0%
!! GTACTATCGACTCCTCCTGA+TGG + chr7.1:40593548-40593567 MS.gene055308:CDS 50.0%
AAGCACTCCATGACTCCTGC+TGG - chr7.1:40593519-40593538 None:intergenic 55.0%
AGGCGCAAAACTGCACACAC+AGG + chr7.1:40593479-40593498 MS.gene055308:CDS 55.0%
ATTGCCAACGGCATCAAGCC+AGG - chr7.1:40593242-40593261 None:intergenic 55.0%
GACGTATCCAGCAGGAGTCA+TGG + chr7.1:40593509-40593528 MS.gene055308:CDS 55.0%
GCCTCAATGACGTATCCAGC+AGG + chr7.1:40593501-40593520 MS.gene055308:CDS 55.0%
TACCAGGCAGGCAACCATGA+GGG - chr7.1:40593888-40593907 None:intergenic 55.0%
TCGACTCCTCCTGATGGGAA+TGG + chr7.1:40593554-40593573 MS.gene055308:CDS 55.0%
TTACCAGGCAGGCAACCATG+AGG - chr7.1:40593889-40593908 None:intergenic 55.0%
! ACAACCTGGCTTGATGCCGT+TGG + chr7.1:40593235-40593254 MS.gene055308:CDS 55.0%
! GCAGAGGTAATGGTGGAACC+AGG - chr7.1:40594534-40594553 None:intergenic 55.0%
GGGATCTAGTCGTGCCCTCA+TGG + chr7.1:40593871-40593890 MS.gene055308:CDS 60.0%
TGCCCTCATGGTTGCCTGCC+TGG + chr7.1:40593883-40593902 MS.gene055308:CDS 65.0%


Chromosome Type Strat End Strand Name
chr7.1 gene 40591808 40596656 40591808 ID=MS.gene055308
chr7.1 mRNA 40591808 40596656 40591808 ID=MS.gene055308.t1;Parent=MS.gene055308
chr7.1 exon 40591808 40591882 40591808 ID=MS.gene055308.t1.exon1;Parent=MS.gene055308.t1
chr7.1 CDS 40591808 40591882 40591808 ID=cds.MS.gene055308.t1;Parent=MS.gene055308.t1
chr7.1 exon 40592206 40592313 40592206 ID=MS.gene055308.t1.exon2;Parent=MS.gene055308.t1
chr7.1 CDS 40592206 40592313 40592206 ID=cds.MS.gene055308.t1;Parent=MS.gene055308.t1
chr7.1 exon 40593224 40593617 40593224 ID=MS.gene055308.t1.exon3;Parent=MS.gene055308.t1
chr7.1 CDS 40593224 40593617 40593224 ID=cds.MS.gene055308.t1;Parent=MS.gene055308.t1
chr7.1 exon 40593699 40593904 40593699 ID=MS.gene055308.t1.exon4;Parent=MS.gene055308.t1
chr7.1 CDS 40593699 40593904 40593699 ID=cds.MS.gene055308.t1;Parent=MS.gene055308.t1
chr7.1 exon 40594315 40594634 40594315 ID=MS.gene055308.t1.exon5;Parent=MS.gene055308.t1
chr7.1 CDS 40594315 40594634 40594315 ID=cds.MS.gene055308.t1;Parent=MS.gene055308.t1
chr7.1 exon 40594728 40594791 40594728 ID=MS.gene055308.t1.exon6;Parent=MS.gene055308.t1
chr7.1 CDS 40594728 40594791 40594728 ID=cds.MS.gene055308.t1;Parent=MS.gene055308.t1
chr7.1 exon 40594985 40595075 40594985 ID=MS.gene055308.t1.exon7;Parent=MS.gene055308.t1
chr7.1 CDS 40594985 40595075 40594985 ID=cds.MS.gene055308.t1;Parent=MS.gene055308.t1
chr7.1 exon 40595416 40595624 40595416 ID=MS.gene055308.t1.exon8;Parent=MS.gene055308.t1
chr7.1 CDS 40595416 40595624 40595416 ID=cds.MS.gene055308.t1;Parent=MS.gene055308.t1
chr7.1 exon 40595709 40595755 40595709 ID=MS.gene055308.t1.exon9;Parent=MS.gene055308.t1
chr7.1 CDS 40595709 40595755 40595709 ID=cds.MS.gene055308.t1;Parent=MS.gene055308.t1
chr7.1 exon 40595854 40595875 40595854 ID=MS.gene055308.t1.exon10;Parent=MS.gene055308.t1
chr7.1 CDS 40595854 40595875 40595854 ID=cds.MS.gene055308.t1;Parent=MS.gene055308.t1
chr7.1 exon 40596290 40596352 40596290 ID=MS.gene055308.t1.exon11;Parent=MS.gene055308.t1
chr7.1 CDS 40596290 40596352 40596290 ID=cds.MS.gene055308.t1;Parent=MS.gene055308.t1
chr7.1 exon 40596443 40596481 40596443 ID=MS.gene055308.t1.exon12;Parent=MS.gene055308.t1
chr7.1 CDS 40596443 40596481 40596443 ID=cds.MS.gene055308.t1;Parent=MS.gene055308.t1
chr7.1 exon 40596585 40596656 40596585 ID=MS.gene055308.t1.exon13;Parent=MS.gene055308.t1
chr7.1 CDS 40596585 40596656 40596585 ID=cds.MS.gene055308.t1;Parent=MS.gene055308.t1
Gene Sequence

>MS.gene055308

ATGGCTACTACTCTTAATTACTCATGCACCCCACCAAAAACCTCTAACAATAACAACCCCATTTCAGTTTCCAAGGTAAGGGTCATAGTTAGGGTTAGACCCTTCCTCTCTCACGAAACCACAAGAAATTGTGATGACCCAGTTTCTTGTATCTCACTTTTAGATCAAGATTTTCAATCCCAAAATGATGTAGCAGTTTATCTCAAAGACCCACTTACCAGGTTTCAAAAAAATTCAATTTTTTTTTTAGAAAAAGTTCACTTTTTTATTATTATTGTTACTGTGAATTATGATTAGTTAAGTTATTGAATTTTGGTTTTTGATTTTGGTTTTTTAGTCGGAATGAGTGTTACAAGTTGGATTCTTTCTTTGATCAAGAGGATAACAATGTGGGTCAGATATTTGAGAGAGAAGTTAGTCCGATGATACCGGCTATTTTCGGTGGATGTAATGCTACTGTGTTTGCTTATGGTGCTACTGGTAGTGGAAAGACATATACTATGCAGGTGAGAGTGTGATCTATATGTGTGAATTAGTTTAATTTTGTTGTGAAATGTCAATTTTGTTAATTTGTTTTTGGTATATGCAGGTGAGAGAGTGTGATCTATGTATGTTAATTAGTTTAATTTTGTTGTGAAATGTCAATTTTTTATGTTGACAGTAACAATTATGTGATTATGTGAGGGATCAGAAAGTGAACGAACCCACCTTTGGTAGATTTATTGAATTTTTAGTATTTGGTTGTAAATGTAAGTTTGAGTTCAGAGGGTGGTGAGGAGTAGTACTCTTTTTCTTGTTTAACCATGACATAGGTTATGGTTATACTTTTCTGAATATGGTAAAACGGTCAATTTTTGTAGTTAGTATATGTTATATGTTAGTGAATTATGTCATCATTCATAAATTGAGCCTTATCTAGTGCAATAATGTATGGATCCTTTGGCTATGCACAATTTGGCTCAGCTCAGATGGTTATAGCCATAGGTTGTACAAACTCTAATGGTATTAATGCCGGTGGTAAATGAAGAGAGCATTTCTAGCAATTTTGGTGGAAGGAGGAGTAATTTATCTAGTATATTTCTTATTTTCTATTGCAATGATTTTATCTCAAGGTGCTGGAACAGCTTCATAAGATGTAGCTTTTGGAGTTTGGACTGAACCCTAATCGTATATTAGGGATGTAGTAGCTGTGGTGTAATTGGTGTTTCGTCTTCTCCCTAGAGTTTTTCTCACTTCTACTGAGACTTTGTATTCTTTTTCCTATACTACCAAAAATGAGGATTGAAAATAACTGATCCACTTTTGAATTCTTGATATTGGTAGTGCCTGGTTGTTTTTATGTGCCTGTTTAATTTTTTAGCAGTTTCTTACTTTTTTGTGTTGTGTAGTTGAAATAAACGATGCTTGGTGTTTCAGGGAACTGAAGAACAACCTGGCTTGATGCCGTTGGCAATGTCCACTATCCTGTCTATTTGTCAAAACACTGGTAGCACAGCTCAAATTTCATACTATGAGGTCTACATGGACCGATGTTACGACCTCTTAGAGTTAAAAGCAAGTGAGATTTCAGTTTTGGATGACAAAGATGGCCATATTCACCTCAGGGGACTATCTCAAGTTCCTGTAAATACAATGTCCGAATTTCAAGAGGTCTTCTCCAGTGGTATTCAGAGGCGCAAAACTGCACACACAGGCCTCAATGACGTATCCAGCAGGAGTCATGGAGTGCTTGTGATATCTGTACTATCGACTCCTCCTGATGGGAATGGAAGTCTTGTATGTGGAAAACTGAACCTCATAGACTTGGCAGGTTACCGTCCACTCAATTGGGGTAATGGGTTTGATGTATTCCAAGCAACGGAAGGACATAATGCGTTTAAAGTTGATGCAGGTAATGAAGACAATAGAAGGAGCTGCAATGAAGGGATTCGTCTTCAAGAGAGTGCTAAGATAAATCAGTCCTTGTTTGCACTGTCAAATGTGATATATGCGTTGAACAACAACAAACCAAGAACACCCTATAGGGACAGCAAATTGACCCGTATATTGCAGGACTCTCTAGGGGGATCTAGTCGTGCCCTCATGGTTGCCTGCCTGGTAAAGCTATAAGTTTTATAGTTTTTTTCCTCTCATTTAATATTGGTTCATTGGATTTGATATGCATGACAAGAAAGAGCTTGAGGGGGTGATATATAAGTTGTAGGTTACTTGTTCAACCATTAGAATGACCAAGAGAATTGCATCTTAGCTTAATTCCCCTATTAATTCTGATTAGTTTCGAGATTTCTGTTATTCCACCCGCATTAGACTAGACATTGGAAACGTCAACAACTGTGGATAGAAAAACAAATATCTAGGTTTGATACCAGATCTAATATATACTCTGATTTTTTAAAAGGCAAGAACTGCTTAAACTATATAACCATTACTCGTGTCATAACTAGTCGGTATGCAACTCTAAATTAGATATTCAGTGTTTAATTATAGCCCTTTATGTGTGATTTCAGAATCCAGGAGAATATCAGGAATCTGTTCATACTGTTAGTTTGGCTGCTCGATCAAGGCACGTCTCTAATTTTGTACCTTCAGCTCATAAACTAGAGACACCAAAAGGTAACGTTGACATGGAAGCCAAATTGAAAGCTTGGCTAGAATCAAGAGGTAAGATAAAGAGCTCACAACAAAGACTTGGAGCATTTAATTCTCCAGTTGTGCAAAAAACTCCTGGTTCCACCATTACCTCTGCTAGGAGATCAGTTACTTTCAATAGCTCAGTGAAGGGTGGCAGAACTTTCGTCAACCAAAAAGCTCAACATACTACTGAGAGGTAACTATGGTCTGATCATTGAAAATAAAATTATGGAGTATGATTTTCTCATTGATTTTCTGTTAGTGATATTTTCTCTTACTGTGTAAGCAGGGCCTTTGGTGTCTCTTTTAGAAATTTACTAGATGGTGAAGTTGCTTTTGATTCTTGCAAAAAGGTGAGTGAGTGTCACAAGTGAAGGACACGTACTAAAAAGTTCACTAATTACAAGTACTATGCCACTAATACTGAAAAAGACAGGCATTATCAAAAAGTACAAGGAACTGTTTTTGTCTTGATGAATATTAAATTTTCATGCATTGGAAATATTTGCATTTTTCTTGACTATAATAATATTTAATGCTATGTAGAACATGCATTCTGGTGTTGAGGACAATGATAAGAGAGAGACTGAGCATGAGGCCAATAAGGCAGCATTGGAATCATATAATGATGTACCTGGTATGTCATTACTTGTGTGATCCCTGCACTTTGCATTTATTCGATATTATAAAGAAAATGGACTCTGTACTTGAAATGTCGTAATTGCATTCACCGTAGTTGGCCAACCAGAACAGTTGGATAAATATGAAACGGTTCATATTTCTGGTTTCTTTTAAAACTCGATGTACTGAGCTTAAAATATGAATTGTTTGATCTTCATCCAACAGTTTCGATTTACTGATTGCGATGAATGTGTGGTACTATGATCCGAACTATGGTCACATACATTGATTAATACATGGTAGAGTCTAATATAACTTTGCTTTCTAAAGCTTGAAGCACATGCTTTTGTATGCAGATGAACCCTTAAGCAAAGATGTACCAGCAGTACTACAAAGTCCATTAAGAAAAGCTCTCTCTCCCGTCAACATCAATGGTATTCAAAACCATCTTCAGACTATGTCTTTGACACGGACACCTTTTTCTGCAACCTGCTCCACTAAGAAAGGGTTTCAGGAAAATGGCACTCCACTGGACAAATTCAGTGCAAGAAGTTCTGCTTTGAAGGTACACCTAGTTGTTTTAACTTCACTAACAAAATGGAATTTGTGAATCTCCTTTCTCACATAATCTATTTTTTTTAATGTGTAGAACTGTCTAGTTCAAGAATACGTTGATTTGTTAAATAATGCAAGCAGGTAAATAACATTCTCCCTTGTATTTTGCATAACTTCTAAATTATACTCGGTGAGCCTTCTTTCAAGGTGCCTTAACACTGTTTAATTTTTAAATGCAGAGAGGAGTTACTAGAGTTAAAGGTACATGCACGGTTGCTTGCCACATGAATGTCCAGTTTGAATAGTCTCTTTATCTGACAGTTTTTCATTATTGCACTATTCTTTAGGGTCCATTTTGGTCTGAGAAATCATTCTGTTTTAACTTTTTTGTTTTTTTACTTTTGATTACAAAACAACCATGTGCATGTTTGGATTGACGATGAGATTGGAAGAATCACGGCGATCCACTTTAATTTTGTCAAAAATTACACTTTAAAGCTTCAACGAAATCACAATGTTGCCAAACTCACTGCTCATCCAAACATCCATCACATTATTTTCACTTTGTTTCTTGTTTTCAGATATCTCGTGTACAATATTTGAAAATAAGAAACAAAGTGACATGATTTTTCTTCATTTTCTAATACTTGGGATTCAATCATTGTATTCCTTCAGGGCATAGGAGACAAAATGGCAGATTACATTATAGACCTCAGAGAAGAAAGTCCACTAAAATCGGTTAGTATAAATATAATTCATAACTTACAACACAGATACAATTAATTCATCAAGATGCTTTTAGTGATACATTTTTTTGGCATGTTGCAGTTAAGTGACCTGGAGAAAATTGGTCTGTCTTTGAAGCAGGTATATCACTACATATATATAAGCATAATGAAATTTTAGTTGAAAATCTAGTTTAGTTATAAAAATGTGAACAAAATTCTAACTTGTACTACTTGTTTGGCAGGCTCATAACCTGTTCACTAAAGCTGCAAAAAAACTCTTTGATGATAAAGCAGAAGATTCAATACTCAATTGA

Protein sequence

>MS.gene055308.t1

MATTLNYSCTPPKTSNNNNPISVSKIFEREVSPMIPAIFGGCNATVFAYGATGSGKTYTMQGTEEQPGLMPLAMSTILSICQNTGSTAQISYYEVYMDRCYDLLELKASEISVLDDKDGHIHLRGLSQVPVNTMSEFQEVFSSGIQRRKTAHTGLNDVSSRSHGVLVISVLSTPPDGNGSLVCGKLNLIDLAGNEDNRRSCNEGIRLQESAKINQSLFALSNVIYALNNNKPRTPYRDSKLTRILQDSLGGSSRALMVACLNPGEYQESVHTVSLAARSRHVSNFVPSAHKLETPKGNVDMEAKLKAWLESRGKIKSSQQRLGAFNSPVVQKTPGSTITSARRSVTFNSSVKGGRTFVNQKAQHTTERAFGVSFRNLLDGEVAFDSCKKNMHSGVEDNDKRETEHEANKAALESYNDVPDEPLSKDVPAVLQSPLRKALSPVNINGIQNHLQTMSLTRTPFSATCSTKKGFQENGTPLDKFSARSSALKNCLVQEYVDLLNNASREELLELKGIGDKMADYIIDLREESPLKSLSDLEKIGLSLKQAHNLFTKAAKKLFDDKAEDSILN