Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052917.t1 | XP_013461343.1 | 96.6 | 507 | 17 | 0 | 1 | 507 | 1 | 507 | 7.80E-223 | 783.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052917.t1 | Q9LPL6 | 51.9 | 507 | 218 | 7 | 1 | 497 | 1 | 491 | 4.9e-125 | 449.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052917.t1 | A0A072V220 | 96.6 | 507 | 17 | 0 | 1 | 507 | 1 | 507 | 5.6e-223 | 783.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049260 | MS.gene052917 | -0.805493 | 1.30E-49 | -1.69E-46 |
| MS.gene050529 | MS.gene052917 | -0.801933 | 7.13E-49 | -1.69E-46 |
| MS.gene052178 | MS.gene052917 | -0.818658 | 1.75E-52 | -1.69E-46 |
| MS.gene052344 | MS.gene052917 | 0.800502 | 1.40E-48 | -1.69E-46 |
| MS.gene052917 | MS.gene054473 | -0.801042 | 1.08E-48 | -1.69E-46 |
| MS.gene052917 | MS.gene057779 | -0.800942 | 1.14E-48 | -1.69E-46 |
| MS.gene052917 | MS.gene059294 | -0.822605 | 2.17E-53 | -1.69E-46 |
| MS.gene052917 | MS.gene05984 | -0.80044 | 1.44E-48 | -1.69E-46 |
| MS.gene052917 | MS.gene061049 | -0.804598 | 2.00E-49 | -1.69E-46 |
| MS.gene052917 | MS.gene061679 | -0.820517 | 6.58E-53 | -1.69E-46 |
| MS.gene052917 | MS.gene061788 | -0.801748 | 7.78E-49 | -1.69E-46 |
| MS.gene052917 | MS.gene061836 | 0.80392 | 2.77E-49 | -1.69E-46 |
| MS.gene052917 | MS.gene061837 | 0.82204 | 2.93E-53 | -1.69E-46 |
| MS.gene052917 | MS.gene061838 | 0.817321 | 3.50E-52 | -1.69E-46 |
| MS.gene052917 | MS.gene062883 | -0.819866 | 9.28E-53 | -1.69E-46 |
| MS.gene052917 | MS.gene063114 | -0.801618 | 8.27E-49 | -1.69E-46 |
| MS.gene052917 | MS.gene064407 | 0.811676 | 6.22E-51 | -1.69E-46 |
| MS.gene052917 | MS.gene065137 | -0.815113 | 1.09E-51 | -1.69E-46 |
| MS.gene052917 | MS.gene065138 | -0.822143 | 2.77E-53 | -1.69E-46 |
| MS.gene052917 | MS.gene068905 | -0.803526 | 3.34E-49 | -1.69E-46 |
| MS.gene052917 | MS.gene069431 | 0.819589 | 1.07E-52 | -1.69E-46 |
| MS.gene052917 | MS.gene069680 | -0.820519 | 6.57E-53 | -1.69E-46 |
| MS.gene052917 | MS.gene069681 | -0.819129 | 1.37E-52 | -1.69E-46 |
| MS.gene052917 | MS.gene069682 | -0.810649 | 1.04E-50 | -1.69E-46 |
| MS.gene052917 | MS.gene070491 | -0.810626 | 1.05E-50 | -1.69E-46 |
| MS.gene052917 | MS.gene070724 | 0.815501 | 8.95E-52 | -1.69E-46 |
| MS.gene052917 | MS.gene070752 | -0.807753 | 4.33E-50 | -1.69E-46 |
| MS.gene052917 | MS.gene071821 | -0.80376 | 2.99E-49 | -1.69E-46 |
| MS.gene052917 | MS.gene073340 | 0.827172 | 1.81E-54 | -1.69E-46 |
| MS.gene052917 | MS.gene08664 | -0.806537 | 7.84E-50 | -1.69E-46 |
| MS.gene052917 | MS.gene08665 | -0.821299 | 4.35E-53 | -1.69E-46 |
| MS.gene052917 | MS.gene20098 | -0.811384 | 7.19E-51 | -1.69E-46 |
| MS.gene052917 | MS.gene20612 | -0.800275 | 1.56E-48 | -1.69E-46 |
| MS.gene052917 | MS.gene21053 | -0.806646 | 7.43E-50 | -1.69E-46 |
| MS.gene052917 | MS.gene26568 | 0.806964 | 6.37E-50 | -1.69E-46 |
| MS.gene052917 | MS.gene26990 | -0.811458 | 6.93E-51 | -1.69E-46 |
| MS.gene052917 | MS.gene27725 | -0.807524 | 4.85E-50 | -1.69E-46 |
| MS.gene052917 | MS.gene29146 | -0.812252 | 4.66E-51 | -1.69E-46 |
| MS.gene052917 | MS.gene31117 | -0.800544 | 1.37E-48 | -1.69E-46 |
| MS.gene052917 | MS.gene35717 | 0.810855 | 9.37E-51 | -1.69E-46 |
| MS.gene052917 | MS.gene35721 | -0.820939 | 5.26E-53 | -1.69E-46 |
| MS.gene052917 | MS.gene37213 | -0.803719 | 3.05E-49 | -1.69E-46 |
| MS.gene052917 | MS.gene37435 | 0.832461 | 9.33E-56 | -1.69E-46 |
| MS.gene052917 | MS.gene37910 | -0.800123 | 1.67E-48 | -1.69E-46 |
| MS.gene052917 | MS.gene39585 | 0.803215 | 3.88E-49 | -1.69E-46 |
| MS.gene052917 | MS.gene40511 | -0.802748 | 4.84E-49 | -1.69E-46 |
| MS.gene052917 | MS.gene40751 | -0.804173 | 2.45E-49 | -1.69E-46 |
| MS.gene052917 | MS.gene40923 | -0.808832 | 2.55E-50 | -1.69E-46 |
| MS.gene052917 | MS.gene42660 | -0.8018 | 7.59E-49 | -1.69E-46 |
| MS.gene052917 | MS.gene43917 | -0.814306 | 1.65E-51 | -1.69E-46 |
| MS.gene052917 | MS.gene44274 | -0.800867 | 1.18E-48 | -1.69E-46 |
| MS.gene052917 | MS.gene44398 | -0.803286 | 3.75E-49 | -1.69E-46 |
| MS.gene052917 | MS.gene46272 | 0.804853 | 1.77E-49 | -1.69E-46 |
| MS.gene052917 | MS.gene47517 | 0.814794 | 1.28E-51 | -1.69E-46 |
| MS.gene052917 | MS.gene51067 | -0.802044 | 6.76E-49 | -1.69E-46 |
| MS.gene052917 | MS.gene52238 | -0.807431 | 5.07E-50 | -1.69E-46 |
| MS.gene052917 | MS.gene52399 | -0.812789 | 3.55E-51 | -1.69E-46 |
| MS.gene052917 | MS.gene54700 | -0.812879 | 3.40E-51 | -1.69E-46 |
| MS.gene052917 | MS.gene55219 | 0.813587 | 2.37E-51 | -1.69E-46 |
| MS.gene052917 | MS.gene56808 | -0.807903 | 4.03E-50 | -1.69E-46 |
| MS.gene052917 | MS.gene57299 | -0.802653 | 5.07E-49 | -1.69E-46 |
| MS.gene052917 | MS.gene57566 | -0.801507 | 8.72E-49 | -1.69E-46 |
| MS.gene052917 | MS.gene57944 | 0.802916 | 4.47E-49 | -1.69E-46 |
| MS.gene052917 | MS.gene61507 | -0.822798 | 1.95E-53 | -1.69E-46 |
| MS.gene052917 | MS.gene62005 | -0.801375 | 9.28E-49 | -1.69E-46 |
| MS.gene052917 | MS.gene62154 | -0.800127 | 1.67E-48 | -1.69E-46 |
| MS.gene052917 | MS.gene62419 | -0.808944 | 2.41E-50 | -1.69E-46 |
| MS.gene052917 | MS.gene62594 | -0.817194 | 3.74E-52 | -1.69E-46 |
| MS.gene052917 | MS.gene62645 | -0.835222 | 1.90E-56 | -1.69E-46 |
| MS.gene052917 | MS.gene63376 | 0.824259 | 8.89E-54 | -1.69E-46 |
| MS.gene052917 | MS.gene64742 | -0.8001 | 1.69E-48 | -1.69E-46 |
| MS.gene052917 | MS.gene66847 | -0.813345 | 2.68E-51 | -1.69E-46 |
| MS.gene052917 | MS.gene68168 | -0.814506 | 1.49E-51 | -1.69E-46 |
| MS.gene052917 | MS.gene68907 | -0.821272 | 4.41E-53 | -1.69E-46 |
| MS.gene052917 | MS.gene69215 | 0.80826 | 3.38E-50 | -1.69E-46 |
| MS.gene052917 | MS.gene69234 | 0.800574 | 1.35E-48 | -1.69E-46 |
| MS.gene052917 | MS.gene72466 | -0.809169 | 2.16E-50 | -1.69E-46 |
| MS.gene052917 | MS.gene73679 | 0.80675 | 7.07E-50 | -1.69E-46 |
| MS.gene052917 | MS.gene74587 | -0.82102 | 5.04E-53 | -1.69E-46 |
| MS.gene052917 | MS.gene75021 | -0.826035 | 3.38E-54 | -1.69E-46 |
| MS.gene052917 | MS.gene81602 | -0.805173 | 1.52E-49 | -1.69E-46 |
| MS.gene052917 | MS.gene88870 | -0.803788 | 2.95E-49 | -1.69E-46 |
| MS.gene052917 | MS.gene89630 | -0.801128 | 1.04E-48 | -1.69E-46 |
| MS.gene052917 | MS.gene90444 | -0.809024 | 2.32E-50 | -1.69E-46 |
| MS.gene052917 | MS.gene91584 | -0.802697 | 4.96E-49 | -1.69E-46 |
| MS.gene052917 | MS.gene92773 | -0.817366 | 3.42E-52 | -1.69E-46 |
| MS.gene052917 | MS.gene95864 | -0.833769 | 4.41E-56 | -1.69E-46 |
| MS.gene052917 | MS.gene96331 | 0.81934 | 1.22E-52 | -1.69E-46 |
| MS.gene052917 | MS.gene96371 | -0.816949 | 4.25E-52 | -1.69E-46 |
| MS.gene052917 | MS.gene96864 | -0.837944 | 3.85E-57 | -1.69E-46 |
| MS.gene052917 | MS.gene98214 | -0.817456 | 3.27E-52 | -1.69E-46 |
| MS.gene052917 | MS.gene99375 | -0.834254 | 3.33E-56 | -1.69E-46 |
| MS.gene052917 | MS.gene99622 | -0.853591 | 2.16E-61 | -1.69E-46 |
| MS.gene052917 | MS.gene99735 | -0.82964 | 4.60E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052917.t1 | MTR_3g088805 | 97.830 | 507 | 11 | 0 | 1 | 507 | 1 | 507 | 0.0 | 1016 |
| MS.gene052917.t1 | MTR_1g026840 | 51.105 | 362 | 155 | 6 | 10 | 355 | 7 | 362 | 5.96e-112 | 346 |
| MS.gene052917.t1 | MTR_3g110108 | 57.303 | 267 | 108 | 2 | 9 | 269 | 6 | 272 | 9.44e-104 | 319 |
| MS.gene052917.t1 | MTR_3g110108 | 57.519 | 266 | 107 | 2 | 10 | 269 | 7 | 272 | 5.06e-102 | 320 |
| MS.gene052917.t1 | MTR_7g072310 | 49.621 | 264 | 129 | 1 | 10 | 269 | 15 | 278 | 4.95e-86 | 280 |
| MS.gene052917.t1 | MTR_3g097280 | 39.721 | 287 | 142 | 3 | 5 | 275 | 2 | 273 | 1.21e-59 | 204 |
| MS.gene052917.t1 | MTR_7g072310 | 47.573 | 206 | 104 | 1 | 68 | 269 | 1 | 206 | 1.21e-59 | 208 |
| MS.gene052917.t1 | MTR_8g095280 | 40.000 | 265 | 152 | 4 | 5 | 264 | 2 | 264 | 2.62e-56 | 193 |
| MS.gene052917.t1 | MTR_8g095280 | 40.343 | 233 | 132 | 4 | 37 | 264 | 3 | 233 | 9.88e-49 | 172 |
| MS.gene052917.t1 | MTR_5g007480 | 32.090 | 268 | 172 | 8 | 3 | 264 | 46 | 309 | 5.00e-32 | 127 |
| MS.gene052917.t1 | MTR_7g097010 | 28.819 | 288 | 178 | 9 | 10 | 278 | 43 | 322 | 1.08e-22 | 100 |
| MS.gene052917.t1 | MTR_4g077940 | 31.469 | 286 | 167 | 10 | 3 | 266 | 46 | 324 | 5.23e-21 | 95.5 |
| MS.gene052917.t1 | MTR_4g077940 | 31.469 | 286 | 167 | 10 | 3 | 266 | 73 | 351 | 5.98e-21 | 95.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052917.t1 | AT1G21380 | 58.333 | 528 | 172 | 13 | 1 | 506 | 1 | 502 | 0.0 | 536 |
| MS.gene052917.t1 | AT1G76970 | 53.320 | 512 | 166 | 12 | 1 | 506 | 1 | 445 | 1.24e-161 | 466 |
| MS.gene052917.t1 | AT1G76970 | 53.320 | 512 | 166 | 12 | 1 | 506 | 1 | 445 | 1.24e-161 | 466 |
| MS.gene052917.t1 | AT1G76970 | 53.320 | 512 | 166 | 12 | 1 | 506 | 1 | 445 | 1.24e-161 | 466 |
| MS.gene052917.t1 | AT1G76970 | 53.320 | 512 | 166 | 12 | 1 | 506 | 1 | 445 | 1.24e-161 | 466 |
| MS.gene052917.t1 | AT1G76970 | 50.737 | 475 | 161 | 12 | 38 | 506 | 12 | 419 | 3.10e-133 | 393 |
| MS.gene052917.t1 | AT1G76970 | 50.737 | 475 | 161 | 12 | 38 | 506 | 12 | 419 | 3.10e-133 | 393 |
| MS.gene052917.t1 | AT4G32760 | 49.133 | 346 | 164 | 4 | 7 | 347 | 4 | 342 | 5.03e-106 | 326 |
| MS.gene052917.t1 | AT1G76970 | 49.292 | 424 | 142 | 12 | 89 | 506 | 1 | 357 | 7.14e-106 | 320 |
| MS.gene052917.t1 | AT4G32760 | 49.143 | 350 | 158 | 5 | 7 | 347 | 4 | 342 | 4.42e-105 | 328 |
| MS.gene052917.t1 | AT4G32760 | 49.143 | 350 | 158 | 5 | 7 | 347 | 4 | 342 | 4.80e-105 | 328 |
| MS.gene052917.t1 | AT3G08790 | 52.060 | 267 | 116 | 3 | 9 | 269 | 6 | 266 | 3.84e-89 | 285 |
| MS.gene052917.t1 | AT2G38410 | 43.322 | 307 | 126 | 3 | 10 | 268 | 13 | 319 | 9.07e-73 | 244 |
| MS.gene052917.t1 | AT5G01760 | 42.164 | 268 | 147 | 3 | 9 | 269 | 26 | 292 | 1.87e-63 | 216 |
| MS.gene052917.t1 | AT5G63640 | 43.494 | 269 | 143 | 3 | 5 | 267 | 2 | 267 | 7.68e-63 | 212 |
| MS.gene052917.t1 | AT5G63640 | 43.494 | 269 | 143 | 3 | 5 | 267 | 2 | 267 | 7.68e-63 | 212 |
| MS.gene052917.t1 | AT5G16880 | 31.970 | 269 | 173 | 8 | 9 | 269 | 52 | 318 | 8.63e-32 | 127 |
| MS.gene052917.t1 | AT5G16880 | 31.970 | 269 | 173 | 8 | 9 | 269 | 52 | 318 | 8.63e-32 | 127 |
| MS.gene052917.t1 | AT5G16880 | 31.970 | 269 | 173 | 8 | 9 | 269 | 52 | 318 | 8.63e-32 | 127 |
| MS.gene052917.t1 | AT5G16880 | 33.333 | 243 | 152 | 8 | 9 | 244 | 52 | 291 | 1.15e-29 | 118 |
| MS.gene052917.t1 | AT1G06210 | 27.715 | 267 | 170 | 7 | 9 | 258 | 42 | 302 | 1.40e-21 | 97.1 |
| MS.gene052917.t1 | AT1G06210 | 30.986 | 142 | 94 | 3 | 9 | 149 | 42 | 180 | 1.08e-13 | 72.0 |
Find 104 sgRNAs with CRISPR-Local
Find 401 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTTCTGGTTTCTGTTCTT+TGG | 0.175763 | 3.1:+72011655 | None:intergenic |
| ATCTCAATATGACCTATTAT+TGG | 0.203376 | 3.1:+72011574 | None:intergenic |
| CAAGAAGCATGACACGTTTC+TGG | 0.211611 | 3.1:+72012608 | None:intergenic |
| ATATGACCTATTATTGGTTT+TGG | 0.213860 | 3.1:+72011580 | None:intergenic |
| GATGAGTCAGAAGATGATTT+TGG | 0.239011 | 3.1:-72012340 | MS.gene052917:CDS |
| ATTTGATGATGCTGCTATTC+AGG | 0.241637 | 3.1:-72014823 | MS.gene052917:CDS |
| CTGGTTTCTGTTCTTTGGTT+GGG | 0.252074 | 3.1:+72011660 | None:intergenic |
| CTTCTGACTCATCATCTTCA+TGG | 0.255854 | 3.1:+72012350 | None:intergenic |
| AAGAGACAGCAGCTGTGTTT+TGG | 0.269940 | 3.1:+72016073 | None:intergenic |
| ATTATATGCTGCATAGTATT+GGG | 0.271228 | 3.1:+72015360 | None:intergenic |
| ATAGGCTGTCTGCTATAAAT+TGG | 0.314887 | 3.1:+72011899 | None:intergenic |
| ATTTGCTCATTGGTCCTGAT+TGG | 0.315014 | 3.1:-72017174 | MS.gene052917:CDS |
| ATAGCGGATGAGGTGGGATT+AGG | 0.317539 | 3.1:+72011968 | None:intergenic |
| GATGCATGGCAAGAAGCTTT+TGG | 0.329126 | 3.1:-72015403 | MS.gene052917:CDS |
| GATATCACCTCGGGGTCTTT+CGG | 0.348200 | 3.1:+72013636 | None:intergenic |
| GGCATCTTTGATGCTGGTGG+TGG | 0.350846 | 3.1:+72012103 | None:intergenic |
| TCTGGTTTCTGTTCTTTGGT+TGG | 0.364136 | 3.1:+72011659 | None:intergenic |
| ATCTTTGATGCTGGTGGTGG+GGG | 0.364963 | 3.1:+72012106 | None:intergenic |
| TGTCTCTGATTATACTTTGA+AGG | 0.370774 | 3.1:+72011788 | None:intergenic |
| TTCGTCTACTGACAGCTTGC+TGG | 0.373432 | 3.1:-72011717 | MS.gene052917:CDS |
| CATCCTCCAAAACCAATAAT+AGG | 0.374177 | 3.1:-72011586 | MS.gene052917:CDS |
| CAGTGGTTCTGAAGTCTTCA+TGG | 0.390162 | 3.1:+72011859 | None:intergenic |
| TAGCGGATGAGGTGGGATTA+GGG | 0.392358 | 3.1:+72011969 | None:intergenic |
| CATTATATGCTGCATAGTAT+TGG | 0.394535 | 3.1:+72015359 | None:intergenic |
| GCGTGATATATTACACGAAA+TGG | 0.398151 | 3.1:-72015602 | MS.gene052917:CDS |
| TCTTTGAAAAGGGCATCTTC+TGG | 0.400879 | 3.1:+72011641 | None:intergenic |
| GCATCTTTGATGCTGGTGGT+GGG | 0.400965 | 3.1:+72012104 | None:intergenic |
| GCGAAAGGAACTGCTAATTC+AGG | 0.408666 | 3.1:-72012418 | MS.gene052917:CDS |
| TGGTTTCTGTTCTTTGGTTG+GGG | 0.408861 | 3.1:+72011661 | None:intergenic |
| GCAACCAGTGATTTGCTCAT+TGG | 0.412156 | 3.1:-72017184 | MS.gene052917:CDS |
| TTTGCTCATTGGTCCTGATT+GGG | 0.413807 | 3.1:-72017173 | MS.gene052917:CDS |
| TCGCAATATTGTCATGTTGA+AGG | 0.414484 | 3.1:+72012437 | None:intergenic |
| AATCAACTAGATCTTTGAAA+AGG | 0.414664 | 3.1:+72011630 | None:intergenic |
| ACATGTACAAGTGGCAGAAC+TGG | 0.424522 | 3.1:+72012376 | None:intergenic |
| TCCCAGGGAGCTGGAGGCAG+TGG | 0.429190 | 3.1:+72011842 | None:intergenic |
| AGTCAGATGCATCCGACCTT+AGG | 0.429675 | 3.1:-72014791 | MS.gene052917:intron |
| CATCTTTGATGCTGGTGGTG+GGG | 0.432270 | 3.1:+72012105 | None:intergenic |
| CTCTGATTATACTTTGAAGG+TGG | 0.432987 | 3.1:+72011791 | None:intergenic |
| AGGTAGTAGTGGCATGAGGA+TGG | 0.438987 | 3.1:+72011927 | None:intergenic |
| AACCACTGCCTCCAGCTCCC+TGG | 0.441086 | 3.1:-72011844 | MS.gene052917:CDS |
| TTAACAATCGGTTGAGTTTG+AGG | 0.441299 | 3.1:+72014858 | None:intergenic |
| GGAGATGGCTCATCATATAT+AGG | 0.453485 | 3.1:+72011881 | None:intergenic |
| GAAGATAATTAAGAAGCGCT+TGG | 0.458456 | 3.1:-72016108 | MS.gene052917:CDS |
| AAGATAATTAAGAAGCGCTT+GGG | 0.476491 | 3.1:-72016107 | MS.gene052917:CDS |
| TTTCTGTTCTTTGGTTGGGG+TGG | 0.479671 | 3.1:+72011664 | None:intergenic |
| ATCAACTAGATCTTTGAAAA+GGG | 0.485078 | 3.1:+72011631 | None:intergenic |
| CTCTCTAGGAATAGCGGATG+AGG | 0.485199 | 3.1:+72011958 | None:intergenic |
| TGATTATACTTTGAAGGTGG+GGG | 0.487825 | 3.1:+72011794 | None:intergenic |
| TCAATGTTGATAGCCCAATC+AGG | 0.495239 | 3.1:+72017160 | None:intergenic |
| GCTTGTGTATCCCAGGGAGC+TGG | 0.497061 | 3.1:+72011833 | None:intergenic |
| GACAGGAGCTTGTGTATCCC+AGG | 0.497968 | 3.1:+72011826 | None:intergenic |
| TCTGAAGTCTTCATGGGAGA+TGG | 0.501003 | 3.1:+72011866 | None:intergenic |
| ACCACTGCCTCCAGCTCCCT+GGG | 0.501310 | 3.1:-72011843 | MS.gene052917:CDS |
| TCTGATTATACTTTGAAGGT+GGG | 0.508439 | 3.1:+72011792 | None:intergenic |
| GAGTTCATCCTCACTGACTC+TGG | 0.514966 | 3.1:+72012136 | None:intergenic |
| CTGATTATACTTTGAAGGTG+GGG | 0.515817 | 3.1:+72011793 | None:intergenic |
| TGCAGCATATAATGAACTAA+AGG | 0.517669 | 3.1:-72015350 | MS.gene052917:intron |
| GAGATACTCATACACAGATT+CGG | 0.522064 | 3.1:-72012162 | MS.gene052917:CDS |
| TCTGCTGCAGAATTAACAAT+CGG | 0.522280 | 3.1:+72014846 | None:intergenic |
| CGAGGAGCTACAAATGAAGT+TGG | 0.534144 | 3.1:+72012001 | None:intergenic |
| TCGTCTACTGACAGCTTGCT+GGG | 0.535234 | 3.1:-72011716 | MS.gene052917:CDS |
| CAAAATATGTCAGGGCGTGA+AGG | 0.535246 | 3.1:-72012671 | MS.gene052917:intron |
| TCTTAGTGGTGATGCATACA+AGG | 0.537375 | 3.1:-72012050 | MS.gene052917:CDS |
| GGTTCATCTCATTCAAGTAA+TGG | 0.537379 | 3.1:-72011746 | MS.gene052917:CDS |
| TCAAAGATGCCAGTCTACTC+TGG | 0.537786 | 3.1:-72012091 | MS.gene052917:CDS |
| GTTTGAGGAGGTGTGAAGAA+TGG | 0.551390 | 3.1:+72014873 | None:intergenic |
| TAGACTGGCATCTTTGATGC+TGG | 0.555060 | 3.1:+72012097 | None:intergenic |
| GGTTAAGATAGTGAAGAAGC+GGG | 0.556219 | 3.1:-72015581 | MS.gene052917:intron |
| TTATATGCTGCATAGTATTG+GGG | 0.557867 | 3.1:+72015361 | None:intergenic |
| AGCACGGTTGACTATCTTAG+TGG | 0.568503 | 3.1:-72012064 | MS.gene052917:CDS |
| GGATGGGTTGAAGACTCTCT+AGG | 0.571085 | 3.1:+72011944 | None:intergenic |
| AGGACCAATGAGCAAATCAC+TGG | 0.572265 | 3.1:+72017180 | None:intergenic |
| ACTGGCATCTTTGATGCTGG+TGG | 0.583559 | 3.1:+72012100 | None:intergenic |
| AATTGGTGATGAGGTAGTAG+TGG | 0.585150 | 3.1:+72011916 | None:intergenic |
| CAACATGACAATATTGCGAA+AGG | 0.596738 | 3.1:-72012433 | MS.gene052917:CDS |
| ATATCATTAACATGGACCCT+AGG | 0.596855 | 3.1:-72017129 | MS.gene052917:intron |
| TCATGGTTTACATGTACAAG+TGG | 0.597818 | 3.1:+72012367 | None:intergenic |
| CTAGGAATAGCGGATGAGGT+GGG | 0.601814 | 3.1:+72011962 | None:intergenic |
| GTTTCTGGTAAGAACGGCAC+TGG | 0.602167 | 3.1:+72012623 | None:intergenic |
| TCTAGGAATAGCGGATGAGG+TGG | 0.605134 | 3.1:+72011961 | None:intergenic |
| TTATATTTGTAGGCAAGCAA+AGG | 0.605384 | 3.1:-72016138 | MS.gene052917:intron |
| AGTGGTTCTGAAGTCTTCAT+GGG | 0.606260 | 3.1:+72011860 | None:intergenic |
| TGGTTAAGATAGTGAAGAAG+CGG | 0.607102 | 3.1:-72015582 | MS.gene052917:CDS |
| TGTGTATCCCAGGGAGCTGG+AGG | 0.607755 | 3.1:+72011836 | None:intergenic |
| GTTGAAGGAGTACTCGCTGA+AGG | 0.616029 | 3.1:+72012452 | None:intergenic |
| GGTAGTAGTGGCATGAGGAT+GGG | 0.618700 | 3.1:+72011928 | None:intergenic |
| GTGCTAGTACCAGAGTAGAC+TGG | 0.618718 | 3.1:+72012082 | None:intergenic |
| GGTGATGCATACAAGGCAGA+AGG | 0.619741 | 3.1:-72012043 | MS.gene052917:CDS |
| AATATGTCAGGGCGTGAAGG+AGG | 0.620328 | 3.1:-72012668 | MS.gene052917:intron |
| TCTGCTATAAATTGGTGATG+AGG | 0.626318 | 3.1:+72011907 | None:intergenic |
| TGGTGGAAATTCAACTCCAG+CGG | 0.635802 | 3.1:+72014914 | None:intergenic |
| CTCAGCCGGACTTAAGTGTG+AGG | 0.638020 | 3.1:-72015447 | MS.gene052917:intron |
| TGAAGACTCTCTAGGAATAG+CGG | 0.642392 | 3.1:+72011952 | None:intergenic |
| ACAGGAGCTTGTGTATCCCA+GGG | 0.649202 | 3.1:+72011827 | None:intergenic |
| TGACACGTTTCTGGTAAGAA+CGG | 0.650994 | 3.1:+72012617 | None:intergenic |
| ACAATCGGTTGAGTTTGAGG+AGG | 0.657220 | 3.1:+72014861 | None:intergenic |
| AGTCTACTCTGGTACTAGCA+CGG | 0.660902 | 3.1:-72012080 | MS.gene052917:CDS |
| TCAGCCGGACTTAAGTGTGA+GGG | 0.669116 | 3.1:-72015446 | MS.gene052917:intron |
| TATATGCTGCATAGTATTGG+GGG | 0.675300 | 3.1:+72015362 | None:intergenic |
| ATTGTGTGATATCATTAACA+TGG | 0.682485 | 3.1:-72017137 | MS.gene052917:CDS |
| TTCGGAAACCAGAGTCAGTG+AGG | 0.691532 | 3.1:-72012144 | MS.gene052917:CDS |
| GATGAGGTAGTAGTGGCATG+AGG | 0.699881 | 3.1:+72011923 | None:intergenic |
| GGATTAGGGCTAGAATGACG+AGG | 0.725632 | 3.1:+72011983 | None:intergenic |
| TTTGAATCCGAAAGACCCCG+AGG | 0.741330 | 3.1:-72013643 | MS.gene052917:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATGGTTAATAAATAATATT+AGG | - | chr3.1:72013037-72013056 | MS.gene052917:intron | 10.0% |
| !! | TAACTAAAACAAATAATTAA+AGG | + | chr3.1:72015503-72015522 | None:intergenic | 10.0% |
| !!! | ATATTTCTTTTTTAAGTTAA+AGG | - | chr3.1:72015565-72015584 | MS.gene052917:intron | 10.0% |
| !! | AACAAAACAAAAAAAAGTAA+AGG | + | chr3.1:72014455-72014474 | None:intergenic | 15.0% |
| !! | AGAAAGAATAAATTCAAAAA+TGG | + | chr3.1:72012527-72012546 | None:intergenic | 15.0% |
| !! | TAAATAATATTAGGTGAATT+TGG | - | chr3.1:72013046-72013065 | MS.gene052917:intron | 15.0% |
| !! | TATCAAATATTTCATCTATT+TGG | - | chr3.1:72012779-72012798 | MS.gene052917:intron | 15.0% |
| !!! | AACCTAAATTTTATGAAAAT+AGG | - | chr3.1:72012480-72012499 | MS.gene052917:CDS | 15.0% |
| !!! | AATTTTCTATATTGTATTTG+AGG | + | chr3.1:72013809-72013828 | None:intergenic | 15.0% |
| !!! | AGTTTAGTTTTTATTGTTTA+TGG | - | chr3.1:72015223-72015242 | MS.gene052917:intron | 15.0% |
| !!! | ATTATATATTGATAATAGCA+GGG | - | chr3.1:72014103-72014122 | MS.gene052917:intron | 15.0% |
| !!! | GTTTAGTTTTTATTGTTTAT+GGG | - | chr3.1:72015224-72015243 | MS.gene052917:intron | 15.0% |
| !!! | TAAAAAATTATCTTTTTACG+AGG | - | chr3.1:72012893-72012912 | MS.gene052917:intron | 15.0% |
| !!! | TAAATTTTATGAAAATAGGA+GGG | - | chr3.1:72012484-72012503 | MS.gene052917:CDS | 15.0% |
| !!! | TAATTTTTTTTACTGTTCAA+TGG | - | chr3.1:72013019-72013038 | MS.gene052917:intron | 15.0% |
| !!! | TACATTAATTTTGCTAAAAT+GGG | + | chr3.1:72015354-72015373 | None:intergenic | 15.0% |
| !!! | TGAATTTGAGTTTTATAAAA+GGG | + | chr3.1:72014141-72014160 | None:intergenic | 15.0% |
| !!! | TTACATTAATTTTGCTAAAA+TGG | + | chr3.1:72015355-72015374 | None:intergenic | 15.0% |
| !!! | TTCTATCAATTTTAATACTA+TGG | - | chr3.1:72012421-72012440 | MS.gene052917:CDS | 15.0% |
| !!! | TTGAATTTGAGTTTTATAAA+AGG | + | chr3.1:72014142-72014161 | None:intergenic | 15.0% |
| !!! | TTTAGTTTTTATTGTTTATG+GGG | - | chr3.1:72015225-72015244 | MS.gene052917:intron | 15.0% |
| !! | AAACAATAAAAACTAAACTG+AGG | + | chr3.1:72015222-72015241 | None:intergenic | 20.0% |
| !! | AATGTTCATATTAATTCCTT+AGG | - | chr3.1:72014720-72014739 | MS.gene052917:intron | 20.0% |
| !! | AGAGAATAAACTAATAATGA+AGG | - | chr3.1:72012934-72012953 | MS.gene052917:intron | 20.0% |
| !! | CAGTAAAAAAAATTACTATG+AGG | + | chr3.1:72013014-72013033 | None:intergenic | 20.0% |
| !! | GCATTTAATCATATATCTTT+AGG | - | chr3.1:72014391-72014410 | MS.gene052917:intron | 20.0% |
| !! | TAAATGTGATACATTAATAG+TGG | + | chr3.1:72012074-72012093 | None:intergenic | 20.0% |
| !! | TATAAAAACCAACAATTGAT+CGG | + | chr3.1:72014223-72014242 | None:intergenic | 20.0% |
| !! | TATAATCAGAAAAGATGATT+AGG | + | chr3.1:72012641-72012660 | None:intergenic | 20.0% |
| !! | TATCTATCAAGAAATTCAAA+AGG | + | chr3.1:72015478-72015497 | None:intergenic | 20.0% |
| !! | TTAGTGATAAGATATTAAGA+CGG | - | chr3.1:72012265-72012284 | MS.gene052917:intron | 20.0% |
| !! | TTCATCTATTTGGATATAAT+GGG | - | chr3.1:72012789-72012808 | MS.gene052917:intron | 20.0% |
| !! | TTTAACACACTTGATATTAT+TGG | - | chr3.1:72012841-72012860 | MS.gene052917:intron | 20.0% |
| !! | TTTCATCTATTTGGATATAA+TGG | - | chr3.1:72012788-72012807 | MS.gene052917:intron | 20.0% |
| !! | TTTGTTGAAATTCTTGAAAA+GGG | - | chr3.1:72012032-72012051 | MS.gene052917:CDS | 20.0% |
| !!! | AATTGAGTTGCTTTATTTTA+GGG | - | chr3.1:72016279-72016298 | MS.gene052917:intron | 20.0% |
| !!! | CAAATTTTTCATTTTTTGCA+TGG | - | chr3.1:72014177-72014196 | MS.gene052917:intron | 20.0% |
| !!! | CATTATATATTGATAATAGC+AGG | - | chr3.1:72014102-72014121 | MS.gene052917:intron | 20.0% |
| !!! | CTAAATTTTATGAAAATAGG+AGG | - | chr3.1:72012483-72012502 | MS.gene052917:CDS | 20.0% |
| !!! | CTCCTATTTTCATAAAATTT+AGG | + | chr3.1:72012485-72012504 | None:intergenic | 20.0% |
| !!! | CTTGTTTTTATTTTTCTCAT+GGG | - | chr3.1:72012595-72012614 | MS.gene052917:CDS | 20.0% |
| !!! | CTTTTTTCTCAAGTTATTAT+TGG | + | chr3.1:72011753-72011772 | None:intergenic | 20.0% |
| !!! | GAATTAATATGAACATTTTC+TGG | + | chr3.1:72014717-72014736 | None:intergenic | 20.0% |
| !!! | GAATTTGAGTTTTATAAAAG+GGG | + | chr3.1:72014140-72014159 | None:intergenic | 20.0% |
| !!! | GTGTTATATTCTTTTAATCT+TGG | - | chr3.1:72012751-72012770 | MS.gene052917:intron | 20.0% |
| !!! | TAATTGAGTTGCTTTATTTT+AGG | - | chr3.1:72016278-72016297 | MS.gene052917:intron | 20.0% |
| !!! | TACTTGCATTATTAACTTTT+TGG | - | chr3.1:72013762-72013781 | MS.gene052917:intron | 20.0% |
| !!! | TCTTTTCTGATTATATTTGT+AGG | - | chr3.1:72012646-72012665 | MS.gene052917:CDS | 20.0% |
| !!! | TGTTTTTTTTTCTTCTTCTT+TGG | - | chr3.1:72014765-72014784 | MS.gene052917:intron | 20.0% |
| !!! | TTTTGTTGAAATTCTTGAAA+AGG | - | chr3.1:72012031-72012050 | MS.gene052917:CDS | 20.0% |
| !!! | TTTTTTAGTCAGAATATGTT+TGG | - | chr3.1:72015526-72015545 | MS.gene052917:intron | 20.0% |
| ! | AAAAATATAATGATGACCAC+AGG | + | chr3.1:72013680-72013699 | None:intergenic | 25.0% |
| ! | AACAAAAAAAAGTAAAGGCA+AGG | + | chr3.1:72014450-72014469 | None:intergenic | 25.0% |
| ! | AATGTGAATTAACAATACCT+AGG | + | chr3.1:72011685-72011704 | None:intergenic | 25.0% |
| ! | ACTACTACTAGAATTATTCT+TGG | - | chr3.1:72012964-72012983 | MS.gene052917:intron | 25.0% |
| ! | ATATAATGAACTAAAGGTGA+TGG | - | chr3.1:72013450-72013469 | MS.gene052917:intron | 25.0% |
| ! | ATATTATGTCTCACAGTAAA+TGG | + | chr3.1:72014323-72014342 | None:intergenic | 25.0% |
| ! | ATATTGCTGCAATTAGAAAT+AGG | - | chr3.1:72012449-72012468 | MS.gene052917:CDS | 25.0% |
| ! | ATCTTCCTGTAATACAATAT+TGG | - | chr3.1:72015976-72015995 | MS.gene052917:intron | 25.0% |
| ! | ATGTACATATGCACATTAAA+AGG | + | chr3.1:72011865-72011884 | None:intergenic | 25.0% |
| ! | ATGTGAATTAACAATACCTA+GGG | + | chr3.1:72011684-72011703 | None:intergenic | 25.0% |
| ! | ATTATATGCTGCATAGTATT+GGG | + | chr3.1:72013437-72013456 | None:intergenic | 25.0% |
| ! | ATTGTGTGATATCATTAACA+TGG | - | chr3.1:72011657-72011676 | MS.gene052917:CDS | 25.0% |
| ! | CAAAATAAACAAGTGTATGA+TGG | + | chr3.1:72014042-72014061 | None:intergenic | 25.0% |
| ! | CCATGAGAAAAATAAAAACA+AGG | + | chr3.1:72012597-72012616 | None:intergenic | 25.0% |
| ! | CTACTACTAGAATTATTCTT+GGG | - | chr3.1:72012965-72012984 | MS.gene052917:intron | 25.0% |
| ! | GATTTCAATACTGTAATTTC+AGG | - | chr3.1:72016602-72016621 | MS.gene052917:intron | 25.0% |
| ! | GTAATTAATAACACCAGTAA+TGG | - | chr3.1:72016254-72016273 | MS.gene052917:intron | 25.0% |
| ! | TAGAGATTAAAAATGCTCAA+GGG | - | chr3.1:72015096-72015115 | MS.gene052917:intron | 25.0% |
| ! | TAGATCCAATATTGTATTAC+AGG | + | chr3.1:72015984-72016003 | None:intergenic | 25.0% |
| ! | TATGTTAACTTTGTAGAGAA+TGG | + | chr3.1:72012868-72012887 | None:intergenic | 25.0% |
| ! | TATTGCTGCAATTAGAAATA+GGG | - | chr3.1:72012450-72012469 | MS.gene052917:CDS | 25.0% |
| ! | TCAAAAATTTAGTTGCAGAA+AGG | + | chr3.1:72013281-72013300 | None:intergenic | 25.0% |
| ! | TCCTTAAATGCAAAAGAAAT+GGG | + | chr3.1:72011978-72011997 | None:intergenic | 25.0% |
| ! | TTAGCAAAATTAATGTAAGC+TGG | - | chr3.1:72015357-72015376 | MS.gene052917:CDS | 25.0% |
| ! | TTGTTGAAATTCTTGAAAAG+GGG | - | chr3.1:72012033-72012052 | MS.gene052917:CDS | 25.0% |
| !! | AATATAACACGAGAACTTTT+GGG | + | chr3.1:72016500-72016519 | None:intergenic | 25.0% |
| !! | AATCAAAGAATTTTTCCAAC+AGG | + | chr3.1:72012316-72012335 | None:intergenic | 25.0% |
| !! | AATCAACTAGATCTTTGAAA+AGG | + | chr3.1:72017167-72017186 | None:intergenic | 25.0% |
| !! | AATTTCTCACAATTTTCTAC+AGG | - | chr3.1:72014542-72014561 | MS.gene052917:intron | 25.0% |
| !! | ATCAACTAGATCTTTGAAAA+GGG | + | chr3.1:72017166-72017185 | None:intergenic | 25.0% |
| !! | CTAATAGTAGAATGGTATTT+TGG | - | chr3.1:72014653-72014672 | MS.gene052917:intron | 25.0% |
| !! | TAATATAACACGAGAACTTT+TGG | + | chr3.1:72016501-72016520 | None:intergenic | 25.0% |
| !! | TCTTTCTTTCTTTGTAGTTT+TGG | - | chr3.1:72012544-72012563 | MS.gene052917:intron | 25.0% |
| !! | TGGTCATCATTATATTTTTC+TGG | - | chr3.1:72013681-72013700 | MS.gene052917:CDS | 25.0% |
| !! | TTCATATTTTATGTAGGTAC+TGG | - | chr3.1:72013120-72013139 | MS.gene052917:intron | 25.0% |
| !! | TTTTCCTACCTAGTTAAATA+TGG | - | chr3.1:72014481-72014500 | MS.gene052917:intron | 25.0% |
| !!! | ACTTTAAAGTTGCTGTATTT+TGG | - | chr3.1:72015261-72015280 | MS.gene052917:intron | 25.0% |
| !!! | ATATGACCTATTATTGGTTT+TGG | + | chr3.1:72017217-72017236 | None:intergenic | 25.0% |
| !!! | CCTTGTTTTTATTTTTCTCA+TGG | - | chr3.1:72012594-72012613 | MS.gene052917:intron | 25.0% |
| !!! | TACTGATTTTAATTGATGCA+TGG | - | chr3.1:72013377-72013396 | MS.gene052917:intron | 25.0% |
| !!! | TATGTATTGATTTTTGACAC+TGG | - | chr3.1:72013236-72013255 | MS.gene052917:intron | 25.0% |
| !!! | TATTTTGTGTTTGTTGTGTA+GGG | - | chr3.1:72014055-72014074 | MS.gene052917:intron | 25.0% |
| !!! | TGATTTTTTCTTCATAGAGT+TGG | - | chr3.1:72014519-72014538 | MS.gene052917:intron | 25.0% |
| !!! | TTATTTTGTGTTTGTTGTGT+AGG | - | chr3.1:72014054-72014073 | MS.gene052917:intron | 25.0% |
| !!! | TTGTTGCTTTTTGAATTAAC+AGG | - | chr3.1:72013857-72013876 | MS.gene052917:intron | 25.0% |
| AAAAAATAGTCAGAGAGAGA+GGG | + | chr3.1:72015057-72015076 | None:intergenic | 30.0% | |
| ACTAGCAGAAAATGAAAACA+TGG | + | chr3.1:72015290-72015309 | None:intergenic | 30.0% | |
| ACTGTAAAATCACTACAACT+AGG | + | chr3.1:72016573-72016592 | None:intergenic | 30.0% | |
| AGAATTTCAACAAAACCCAT+AGG | + | chr3.1:72012026-72012045 | None:intergenic | 30.0% | |
| AGATATGTAGGTAAACATGT+AGG | + | chr3.1:72014368-72014387 | None:intergenic | 30.0% | |
| ATAATATGCAGATTCCATAG+CGG | - | chr3.1:72014336-72014355 | MS.gene052917:intron | 30.0% | |
| ATACCATTCTACTATTAGAC+AGG | + | chr3.1:72014651-72014670 | None:intergenic | 30.0% | |
| ATGAAAAGATGATATCACCT+CGG | + | chr3.1:72015171-72015190 | None:intergenic | 30.0% | |
| ATTAAATGCTGCAGATATGT+AGG | + | chr3.1:72014380-72014399 | None:intergenic | 30.0% | |
| ATTATGGAGGAAATGAAACA+TGG | + | chr3.1:72014601-72014620 | None:intergenic | 30.0% | |
| ATTCATGTGTTGAACAGTAA+GGG | - | chr3.1:72014788-72014807 | MS.gene052917:intron | 30.0% | |
| ATTCTGGACAAAATATGTCA+GGG | - | chr3.1:72016115-72016134 | MS.gene052917:CDS | 30.0% | |
| CAAAATTAATGTAAGCTGGT+TGG | - | chr3.1:72015361-72015380 | MS.gene052917:CDS | 30.0% | |
| CATTATATGCTGCATAGTAT+TGG | + | chr3.1:72013438-72013457 | None:intergenic | 30.0% | |
| CATTCCATATTTAACTAGGT+AGG | + | chr3.1:72014488-72014507 | None:intergenic | 30.0% | |
| CTACCTAGTTAAATATGGAA+TGG | - | chr3.1:72014486-72014505 | MS.gene052917:intron | 30.0% | |
| CTAGAGATTAAAAATGCTCA+AGG | - | chr3.1:72015095-72015114 | MS.gene052917:intron | 30.0% | |
| CTCCTTAAATGCAAAAGAAA+TGG | + | chr3.1:72011979-72011998 | None:intergenic | 30.0% | |
| GTATGCACTTGTACAATTAA+TGG | + | chr3.1:72013728-72013747 | None:intergenic | 30.0% | |
| TAAAAAATAGTCAGAGAGAG+AGG | + | chr3.1:72015058-72015077 | None:intergenic | 30.0% | |
| TAAACAGCAACATTTATCAC+AGG | + | chr3.1:72013574-72013593 | None:intergenic | 30.0% | |
| TAGATATGTCATATCTAGCA+CGG | + | chr3.1:72011841-72011860 | None:intergenic | 30.0% | |
| TATAAACGAATAACTTCGAC+AGG | + | chr3.1:72015004-72015023 | None:intergenic | 30.0% | |
| TATTCTGGACAAAATATGTC+AGG | - | chr3.1:72016114-72016133 | MS.gene052917:CDS | 30.0% | |
| TCTCCATTCCATATTTAACT+AGG | + | chr3.1:72014492-72014511 | None:intergenic | 30.0% | |
| TGCAGCATATAATGAACTAA+AGG | - | chr3.1:72013444-72013463 | MS.gene052917:intron | 30.0% | |
| TGTCTCTGATTATACTTTGA+AGG | + | chr3.1:72017009-72017028 | None:intergenic | 30.0% | |
| TGTTGAAATTCTTGAAAAGG+GGG | - | chr3.1:72012034-72012053 | MS.gene052917:CDS | 30.0% | |
| TTATATGCTGCATAGTATTG+GGG | + | chr3.1:72013436-72013455 | None:intergenic | 30.0% | |
| TTATATTTGTAGGCAAGCAA+AGG | - | chr3.1:72012656-72012675 | MS.gene052917:CDS | 30.0% | |
| TTGAACGTAATCACATGTTT+CGG | - | chr3.1:72011780-72011799 | MS.gene052917:CDS | 30.0% | |
| TTGTATTACAGGAAGATTGA+AGG | + | chr3.1:72015973-72015992 | None:intergenic | 30.0% | |
| TTTATCGTGTCAATCTTTCA+AGG | - | chr3.1:72015644-72015663 | MS.gene052917:CDS | 30.0% | |
| ! | CTATATTGTATTTGAGGTGA+AGG | + | chr3.1:72013803-72013822 | None:intergenic | 30.0% |
| ! | GGACACTTCATATTTTATGT+AGG | - | chr3.1:72013114-72013133 | MS.gene052917:intron | 30.0% |
| ! | TCCCATTTCTTTTGCATTTA+AGG | - | chr3.1:72011974-72011993 | MS.gene052917:CDS | 30.0% |
| ! | TCTGATTATACTTTGAAGGT+GGG | + | chr3.1:72017005-72017024 | None:intergenic | 30.0% |
| ! | TGATAATAGCAGGGTATTTA+AGG | - | chr3.1:72014112-72014131 | MS.gene052917:intron | 30.0% |
| ! | TTTTAATCTAATTGCTCAGC+CGG | - | chr3.1:72013333-72013352 | MS.gene052917:intron | 30.0% |
| !! | AAATGTTGCTGTTTACATAC+TGG | - | chr3.1:72013579-72013598 | MS.gene052917:intron | 30.0% |
| !! | AAGATAATTAAGAAGCGCTT+GGG | - | chr3.1:72012687-72012706 | MS.gene052917:intron | 30.0% |
| !! | CTGCAACTAAATTTTTGAAG+AGG | - | chr3.1:72013283-72013302 | MS.gene052917:intron | 30.0% |
| !! | GTTGCTGTTTCTTAATATTC+TGG | - | chr3.1:72016099-72016118 | MS.gene052917:CDS | 30.0% |
| !! | TTAAGGTGGACTAATAACAA+GGG | + | chr3.1:72014889-72014908 | None:intergenic | 30.0% |
| !! | TTTGAAGCTTGCTATGATAT+GGG | - | chr3.1:72011904-72011923 | MS.gene052917:CDS | 30.0% |
| !!! | AGTACTCGTCTTTTTTGATT+TGG | - | chr3.1:72012097-72012116 | MS.gene052917:CDS | 30.0% |
| !!! | TTCACCGCAATTTTTAGTAA+GGG | + | chr3.1:72013149-72013168 | None:intergenic | 30.0% |
| !!! | TTCTGGTATTTTTAGTAAGC+TGG | - | chr3.1:72013698-72013717 | MS.gene052917:CDS | 30.0% |
| !!! | TTTCACCGCAATTTTTAGTA+AGG | + | chr3.1:72013150-72013169 | None:intergenic | 30.0% |
| !!! | TTTTTTGATTTGGACATGTG+CGG | - | chr3.1:72012107-72012126 | MS.gene052917:CDS | 30.0% |
| AAAGGTCCAACCAATTAAGA+AGG | - | chr3.1:72012209-72012228 | MS.gene052917:intron | 35.0% | |
| AACATACCCTTAGTAAGTGA+AGG | - | chr3.1:72015740-72015759 | MS.gene052917:intron | 35.0% | |
| AAGGCAGACACTCATAATTA+TGG | + | chr3.1:72014617-72014636 | None:intergenic | 35.0% | |
| ACATACCCTTAGTAAGTGAA+GGG | - | chr3.1:72015741-72015760 | MS.gene052917:intron | 35.0% | |
| ACTTTCAAGGCCTTCTTAAT+TGG | + | chr3.1:72012222-72012241 | None:intergenic | 35.0% | |
| ATAGGCTGTCTGCTATAAAT+TGG | + | chr3.1:72016898-72016917 | None:intergenic | 35.0% | |
| ATATCATTAACATGGACCCT+AGG | - | chr3.1:72011665-72011684 | MS.gene052917:CDS | 35.0% | |
| CAACATGACAATATTGCGAA+AGG | - | chr3.1:72016361-72016380 | MS.gene052917:intron | 35.0% | |
| CATCCTCCAAAACCAATAAT+AGG | - | chr3.1:72017208-72017227 | MS.gene052917:CDS | 35.0% | |
| CATGTGCAATGACATGTAAA+TGG | + | chr3.1:72014250-72014269 | None:intergenic | 35.0% | |
| GAAATAGTGATTACCTGACA+TGG | - | chr3.1:72013093-72013112 | MS.gene052917:intron | 35.0% | |
| GAATTTGGAAATATTCGTGC+AGG | - | chr3.1:72013061-72013080 | MS.gene052917:intron | 35.0% | |
| GACGAGTACAAAAAACAAAC+TGG | + | chr3.1:72014976-72014995 | None:intergenic | 35.0% | |
| GAGACCCTTACTAAAAATTG+CGG | - | chr3.1:72013142-72013161 | MS.gene052917:intron | 35.0% | |
| GAGATACTCATACACAGATT+CGG | - | chr3.1:72016632-72016651 | MS.gene052917:intron | 35.0% | |
| GATTCATGTGTTGAACAGTA+AGG | - | chr3.1:72014787-72014806 | MS.gene052917:intron | 35.0% | |
| GCAACTCAATTAACCATTAC+TGG | + | chr3.1:72016270-72016289 | None:intergenic | 35.0% | |
| GCATGGTCAAAAATCACAAT+GGG | - | chr3.1:72014194-72014213 | MS.gene052917:intron | 35.0% | |
| GCGTGATATATTACACGAAA+TGG | - | chr3.1:72013192-72013211 | MS.gene052917:intron | 35.0% | |
| GGTAAGCGATTGAACATAAA+TGG | + | chr3.1:72015201-72015220 | None:intergenic | 35.0% | |
| GGTTCATCTCATTCAAGTAA+TGG | - | chr3.1:72017048-72017067 | MS.gene052917:intron | 35.0% | |
| TACAAAAATCTGCTTCAGAC+TGG | + | chr3.1:72013623-72013642 | None:intergenic | 35.0% | |
| TAGACAGGAGAAATATCGAA+AGG | + | chr3.1:72014636-72014655 | None:intergenic | 35.0% | |
| TCAGAATATGTTTGGACAGA+GGG | - | chr3.1:72015534-72015553 | MS.gene052917:intron | 35.0% | |
| TCATGGTTTACATGTACAAG+TGG | + | chr3.1:72016430-72016449 | None:intergenic | 35.0% | |
| TCGCAATATTGTCATGTTGA+AGG | + | chr3.1:72016360-72016379 | None:intergenic | 35.0% | |
| TCTCCTGTCTAATAGTAGAA+TGG | - | chr3.1:72014645-72014664 | MS.gene052917:intron | 35.0% | |
| TCTGCTGCAGAATTAACAAT+CGG | + | chr3.1:72013951-72013970 | None:intergenic | 35.0% | |
| TGAAAAGATGATATCACCTC+GGG | + | chr3.1:72015170-72015189 | None:intergenic | 35.0% | |
| TGCATGGTCAAAAATCACAA+TGG | - | chr3.1:72014193-72014212 | MS.gene052917:intron | 35.0% | |
| TGGAGAACAATCCAATAGTT+AGG | - | chr3.1:72012170-72012189 | MS.gene052917:CDS | 35.0% | |
| TGGTTAAGATAGTGAAGAAG+CGG | - | chr3.1:72013212-72013231 | MS.gene052917:intron | 35.0% | |
| TGTTGTGCATTATGGAATTC+TGG | - | chr3.1:72015315-72015334 | MS.gene052917:intron | 35.0% | |
| TTAACAATCGGTTGAGTTTG+AGG | + | chr3.1:72013939-72013958 | None:intergenic | 35.0% | |
| TTCATCTTGCTCTTTCTTCT+TGG | - | chr3.1:72016544-72016563 | MS.gene052917:intron | 35.0% | |
| TTTATGAAAATAGGAGGGCT+AGG | - | chr3.1:72012489-72012508 | MS.gene052917:CDS | 35.0% | |
| ! | AAATATGAAGTGTCCATGTC+AGG | + | chr3.1:72013109-72013128 | None:intergenic | 35.0% |
| ! | ACACTATTTTCTTCTCTTGG+TGG | + | chr3.1:72013900-72013919 | None:intergenic | 35.0% |
| ! | ATTTAGTTGCAGAAAGGCAT+TGG | + | chr3.1:72013275-72013294 | None:intergenic | 35.0% |
| ! | CACTTACTAAGGGTATGTTT+AGG | + | chr3.1:72015739-72015758 | None:intergenic | 35.0% |
| ! | CTCTGATTATACTTTGAAGG+TGG | + | chr3.1:72017006-72017025 | None:intergenic | 35.0% |
| ! | CTGATTATACTTTGAAGGTG+GGG | + | chr3.1:72017004-72017023 | None:intergenic | 35.0% |
| ! | GATGAGTCAGAAGATGATTT+TGG | - | chr3.1:72016454-72016473 | MS.gene052917:intron | 35.0% |
| ! | TATATGCTGCATAGTATTGG+GGG | + | chr3.1:72013435-72013454 | None:intergenic | 35.0% |
| ! | TCTGCTGAAATGTGTCTTTT+TGG | - | chr3.1:72015445-72015464 | MS.gene052917:CDS | 35.0% |
| ! | TGATTATACTTTGAAGGTGG+GGG | + | chr3.1:72017003-72017022 | None:intergenic | 35.0% |
| !! | ATCTTCTGGTTTCTGTTCTT+TGG | + | chr3.1:72017142-72017161 | None:intergenic | 35.0% |
| !! | ATTTGATGATGCTGCTATTC+AGG | - | chr3.1:72013971-72013990 | MS.gene052917:intron | 35.0% |
| !! | ATTTTGGTCAATTAGCCCAT+AGG | - | chr3.1:72016470-72016489 | MS.gene052917:intron | 35.0% |
| !! | CTTAAGGTGGACTAATAACA+AGG | + | chr3.1:72014890-72014909 | None:intergenic | 35.0% |
| !! | CTTGTTATTAGTCCACCTTA+AGG | - | chr3.1:72014888-72014907 | MS.gene052917:CDS | 35.0% |
| !! | CTTTGAAGCTTGCTATGATA+TGG | - | chr3.1:72011903-72011922 | MS.gene052917:CDS | 35.0% |
| !! | GAAGATAATTAAGAAGCGCT+TGG | - | chr3.1:72012686-72012705 | MS.gene052917:intron | 35.0% |
| !! | TAAGGTGGACTAATAACAAG+GGG | + | chr3.1:72014888-72014907 | None:intergenic | 35.0% |
| !! | TCTGCTATAAATTGGTGATG+AGG | + | chr3.1:72016890-72016909 | None:intergenic | 35.0% |
| !! | TTAGAGTGACAGTTTTGTAC+TGG | + | chr3.1:72016079-72016098 | None:intergenic | 35.0% |
| !! | TTAGGAGTTGGATTTTAGAG+AGG | + | chr3.1:72015721-72015740 | None:intergenic | 35.0% |
| !!! | AAGTTGGTTCTGAGTTTTCA+AGG | + | chr3.1:72016780-72016799 | None:intergenic | 35.0% |
| !!! | AGTTGGTTCTGAGTTTTCAA+GGG | + | chr3.1:72016779-72016798 | None:intergenic | 35.0% |
| !!! | CAACAGTTTTTTGAGCAACA+AGG | - | chr3.1:72017027-72017046 | MS.gene052917:intron | 35.0% |
| !!! | GTTGCTTTATTTTAGGGATG+AGG | - | chr3.1:72016285-72016304 | MS.gene052917:intron | 35.0% |
| !!! | TCATGCCTTTTTTTCTATGC+TGG | - | chr3.1:72015421-72015440 | MS.gene052917:CDS | 35.0% |
| !!! | TGACCTATTATTGGTTTTGG+AGG | + | chr3.1:72017214-72017233 | None:intergenic | 35.0% |
| AAACGAATAACTTCGACAGG+AGG | + | chr3.1:72015001-72015020 | None:intergenic | 40.0% | |
| AAACGTTCCTTGCAAAATGC+AGG | - | chr3.1:72016007-72016026 | MS.gene052917:intron | 40.0% | |
| ACTCTATCAAGATTCGAGAG+TGG | + | chr3.1:72015850-72015869 | None:intergenic | 40.0% | |
| AGGAGGTGAGGTCTATTATT+AGG | - | chr3.1:72015767-72015786 | MS.gene052917:intron | 40.0% | |
| AGGGAGAGATAAAGTAAAGC+TGG | + | chr3.1:72015038-72015057 | None:intergenic | 40.0% | |
| AGTCGATGTGTTGTGCATTA+TGG | - | chr3.1:72015307-72015326 | MS.gene052917:intron | 40.0% | |
| ATCTCCTTCTGCCTAACTAT+TGG | + | chr3.1:72012184-72012203 | None:intergenic | 40.0% | |
| ATGGGAATCCGATCAATTGT+TGG | - | chr3.1:72014212-72014231 | MS.gene052917:intron | 40.0% | |
| ATGTAGACCACGTACTTTCA+AGG | + | chr3.1:72012235-72012254 | None:intergenic | 40.0% | |
| ATTTGCTCATTGGTCCTGAT+TGG | - | chr3.1:72011620-72011639 | MS.gene052917:CDS | 40.0% | |
| CAATCCAATAGTTAGGCAGA+AGG | - | chr3.1:72012177-72012196 | MS.gene052917:intron | 40.0% | |
| CAGAATATGTTTGGACAGAG+GGG | - | chr3.1:72015535-72015554 | MS.gene052917:intron | 40.0% | |
| CAGAGCCAGCATAGAAAAAA+AGG | + | chr3.1:72015429-72015448 | None:intergenic | 40.0% | |
| CATACCCTTAGTAAGTGAAG+GGG | - | chr3.1:72015742-72015761 | MS.gene052917:intron | 40.0% | |
| CATTATGGAATTCTGGACCT+GGG | - | chr3.1:72015322-72015341 | MS.gene052917:intron | 40.0% | |
| CTAACCCCTTCACTTACTAA+GGG | + | chr3.1:72015749-72015768 | None:intergenic | 40.0% | |
| CTAGAAACTCCTTCATGTGT+AGG | + | chr3.1:72015938-72015957 | None:intergenic | 40.0% | |
| CTGGTTTCTGTTCTTTGGTT+GGG | + | chr3.1:72017137-72017156 | None:intergenic | 40.0% | |
| CTTCTGACTCATCATCTTCA+TGG | + | chr3.1:72016447-72016466 | None:intergenic | 40.0% | |
| GAAAAGATGATATCACCTCG+GGG | + | chr3.1:72015169-72015188 | None:intergenic | 40.0% | |
| GAGAGATAAAGTAAAGCTGG+TGG | + | chr3.1:72015035-72015054 | None:intergenic | 40.0% | |
| GATTAAAAATGCTCAAGGGC+TGG | - | chr3.1:72015100-72015119 | MS.gene052917:intron | 40.0% | |
| GCAGACACTCATAATTATGG+AGG | + | chr3.1:72014614-72014633 | None:intergenic | 40.0% | |
| GCTAAAATGGGATAAATCCC+AGG | + | chr3.1:72015342-72015361 | None:intergenic | 40.0% | |
| GGAGATGGCTCATCATATAT+AGG | + | chr3.1:72016916-72016935 | None:intergenic | 40.0% | |
| GGTTAAGATAGTGAAGAAGC+GGG | - | chr3.1:72013213-72013232 | MS.gene052917:intron | 40.0% | |
| GTCAGAATATGTTTGGACAG+AGG | - | chr3.1:72015533-72015552 | MS.gene052917:intron | 40.0% | |
| GTCTCTTGAATGCCAATACA+GGG | - | chr3.1:72012363-72012382 | MS.gene052917:CDS | 40.0% | |
| TAAGGGTTCATCCCTCATAT+GGG | - | chr3.1:72014837-72014856 | MS.gene052917:CDS | 40.0% | |
| TCAAGGCCTTCTTAATTGGT+TGG | + | chr3.1:72012218-72012237 | None:intergenic | 40.0% | |
| TCAGAATTGTTAGGAGAGGT+TGG | - | chr3.1:72015824-72015843 | MS.gene052917:intron | 40.0% | |
| TCCACATGGGGTAATCTTAA+GGG | - | chr3.1:72014820-72014839 | MS.gene052917:CDS | 40.0% | |
| TCTACTGCTGACATGACTAT+TGG | + | chr3.1:72012389-72012408 | None:intergenic | 40.0% | |
| TGACTCAGAATTGTTAGGAG+AGG | - | chr3.1:72015820-72015839 | MS.gene052917:intron | 40.0% | |
| TGGTTTCTGTTCTTTGGTTG+GGG | + | chr3.1:72017136-72017155 | None:intergenic | 40.0% | |
| TGTCTCTTGAATGCCAATAC+AGG | - | chr3.1:72012362-72012381 | MS.gene052917:CDS | 40.0% | |
| TTAAGGGTTCATCCCTCATA+TGG | - | chr3.1:72014836-72014855 | MS.gene052917:CDS | 40.0% | |
| TTCCACATGGGGTAATCTTA+AGG | - | chr3.1:72014819-72014838 | MS.gene052917:CDS | 40.0% | |
| TTTGCTCATTGGTCCTGATT+GGG | - | chr3.1:72011621-72011640 | MS.gene052917:CDS | 40.0% | |
| TTTGGAAATATTCGTGCAGG+AGG | - | chr3.1:72013064-72013083 | MS.gene052917:intron | 40.0% | |
| ! | CTAAGGGTATGTTTAGGAGT+TGG | + | chr3.1:72015733-72015752 | None:intergenic | 40.0% |
| ! | GGCACACTATTTTCTTCTCT+TGG | + | chr3.1:72013903-72013922 | None:intergenic | 40.0% |
| ! | GTAATCACATGTTTCGGTGT+AGG | - | chr3.1:72011786-72011805 | MS.gene052917:CDS | 40.0% |
| ! | TCGGAGGGAAGTCTATATTT+TGG | + | chr3.1:72015692-72015711 | None:intergenic | 40.0% |
| ! | TCTGGTTTCTGTTCTTTGGT+TGG | + | chr3.1:72017138-72017157 | None:intergenic | 40.0% |
| ! | TCTTAGTCCTGCATTTTGCA+AGG | + | chr3.1:72016017-72016036 | None:intergenic | 40.0% |
| ! | TCTTAGTGGTGATGCATACA+AGG | - | chr3.1:72016744-72016763 | MS.gene052917:intron | 40.0% |
| ! | TGAAGACTCTCTAGGAATAG+CGG | + | chr3.1:72016845-72016864 | None:intergenic | 40.0% |
| ! | TTTAGGGATGAGGAGCTTTT+AGG | - | chr3.1:72016295-72016314 | MS.gene052917:intron | 40.0% |
| ! | TTTTCCCTCACACTTAAGTC+CGG | + | chr3.1:72013355-72013374 | None:intergenic | 40.0% |
| ! | TTTTTGAATTAACAGGCCGC+TGG | - | chr3.1:72013864-72013883 | MS.gene052917:intron | 40.0% |
| !! | AATTGGTGATGAGGTAGTAG+TGG | + | chr3.1:72016881-72016900 | None:intergenic | 40.0% |
| !! | AGTGGTTCTGAAGTCTTCAT+GGG | + | chr3.1:72016937-72016956 | None:intergenic | 40.0% |
| !! | GAGTTGGATTTTAGAGAGGA+CGG | + | chr3.1:72015717-72015736 | None:intergenic | 40.0% |
| !! | GTAAAAAGAGCACCTAAGGT+CGG | + | chr3.1:72014018-72014037 | None:intergenic | 40.0% |
| !! | GTTGAACAGTAAGGGTGTTT+AGG | - | chr3.1:72014796-72014815 | MS.gene052917:CDS | 40.0% |
| !! | TCAATGTTGATAGCCCAATC+AGG | + | chr3.1:72011637-72011656 | None:intergenic | 40.0% |
| !! | TCTTTGAAAAGGGCATCTTC+TGG | + | chr3.1:72017156-72017175 | None:intergenic | 40.0% |
| !! | TGACACGTTTCTGGTAAGAA+CGG | + | chr3.1:72016180-72016199 | None:intergenic | 40.0% |
| !! | TGGAGTAAAAAGAGCACCTA+AGG | + | chr3.1:72014022-72014041 | None:intergenic | 40.0% |
| !! | TGTTTGTTGTGTAGGGCTAA+TGG | - | chr3.1:72014062-72014081 | MS.gene052917:intron | 40.0% |
| !!! | AGAACTTTTGGGTTCACCTA+TGG | + | chr3.1:72016489-72016508 | None:intergenic | 40.0% |
| !!! | ATTGGTTTTGGAGGATGAAG+AGG | + | chr3.1:72017205-72017224 | None:intergenic | 40.0% |
| !!! | GAACTTTTGGGTTCACCTAT+GGG | + | chr3.1:72016488-72016507 | None:intergenic | 40.0% |
| AAATGCACCATGCCCATATG+AGG | + | chr3.1:72014852-72014871 | None:intergenic | 45.0% | |
| AATATGTTTGGACAGAGGGG+AGG | - | chr3.1:72015538-72015557 | MS.gene052917:intron | 45.0% | |
| AATGCACCATGCCCATATGA+GGG | + | chr3.1:72014851-72014870 | None:intergenic | 45.0% | |
| ACAATCGGTTGAGTTTGAGG+AGG | + | chr3.1:72013936-72013955 | None:intergenic | 45.0% | |
| ACATGTACAAGTGGCAGAAC+TGG | + | chr3.1:72016421-72016440 | None:intergenic | 45.0% | |
| ACCATCACATCACATGCCTA+AGG | + | chr3.1:72014739-72014758 | None:intergenic | 45.0% | |
| ACCCTTAAGATTACCCCATG+TGG | + | chr3.1:72014824-72014843 | None:intergenic | 45.0% | |
| AGACAACATTAGCTAGCGCA+AGG | + | chr3.1:72014940-72014959 | None:intergenic | 45.0% | |
| AGCACGGTTGACTATCTTAG+TGG | - | chr3.1:72016730-72016749 | MS.gene052917:intron | 45.0% | |
| AGGACCAATGAGCAAATCAC+TGG | + | chr3.1:72011617-72011636 | None:intergenic | 45.0% | |
| AGTCATGTCAGCAGTAGATG+AGG | - | chr3.1:72012391-72012410 | MS.gene052917:CDS | 45.0% | |
| AGTCTACTCTGGTACTAGCA+CGG | - | chr3.1:72016714-72016733 | MS.gene052917:intron | 45.0% | |
| ATGTAGCTAACTCTGCCTGT+TGG | - | chr3.1:72012298-72012317 | MS.gene052917:intron | 45.0% | |
| ATTAAGGAGGGTAGGTCATG+TGG | - | chr3.1:72012150-72012169 | MS.gene052917:CDS | 45.0% | |
| ATTCTTGAAAAGGGGGTCGA+TGG | - | chr3.1:72012041-72012060 | MS.gene052917:CDS | 45.0% | |
| CAAAATATGTCAGGGCGTGA+AGG | - | chr3.1:72016123-72016142 | MS.gene052917:CDS | 45.0% | |
| CAACAAAACCCATAGGACCT+GGG | + | chr3.1:72012019-72012038 | None:intergenic | 45.0% | |
| CATGACTATTGGCCCTGTAT+TGG | + | chr3.1:72012378-72012397 | None:intergenic | 45.0% | |
| CATGTAGGTTGTAACCGCTA+TGG | + | chr3.1:72014353-72014372 | None:intergenic | 45.0% | |
| CCTAACCCCTTCACTTACTA+AGG | + | chr3.1:72015750-72015769 | None:intergenic | 45.0% | |
| CCTCTTATCAAAGCCATGTC+TGG | + | chr3.1:72011815-72011834 | None:intergenic | 45.0% | |
| CCTTAGTAAGTGAAGGGGTT+AGG | - | chr3.1:72015747-72015766 | MS.gene052917:intron | 45.0% | |
| CGAGGAGCTACAAATGAAGT+TGG | + | chr3.1:72016796-72016815 | None:intergenic | 45.0% | |
| GCATTATGGAATTCTGGACC+TGG | - | chr3.1:72015321-72015340 | MS.gene052917:intron | 45.0% | |
| GCGAAAGGAACTGCTAATTC+AGG | - | chr3.1:72016376-72016395 | MS.gene052917:intron | 45.0% | |
| GGCAGAAGGAGATTGAGAAA+AGG | - | chr3.1:72012191-72012210 | MS.gene052917:intron | 45.0% | |
| GTCTTTCCCTTAATGCCTGT+TGG | - | chr3.1:72015910-72015929 | MS.gene052917:intron | 45.0% | |
| GTGCGTGACTCAGAATTGTT+AGG | - | chr3.1:72015815-72015834 | MS.gene052917:intron | 45.0% | |
| TAGACTGGCATCTTTGATGC+TGG | + | chr3.1:72016700-72016719 | None:intergenic | 45.0% | |
| TAGGAGCCAACAGGCATTAA+GGG | + | chr3.1:72015919-72015938 | None:intergenic | 45.0% | |
| TAGTAAGTGAAGGGGTTAGG+AGG | - | chr3.1:72015750-72015769 | MS.gene052917:intron | 45.0% | |
| TCAAAGATGCCAGTCTACTC+TGG | - | chr3.1:72016703-72016722 | MS.gene052917:intron | 45.0% | |
| TCAACAAAACCCATAGGACC+TGG | + | chr3.1:72012020-72012039 | None:intergenic | 45.0% | |
| TCCTTAGGCATGTGATGTGA+TGG | - | chr3.1:72014735-72014754 | MS.gene052917:intron | 45.0% | |
| TGGTGGAAATTCAACTCCAG+CGG | + | chr3.1:72013883-72013902 | None:intergenic | 45.0% | |
| TTAGGCATGTGATGTGATGG+TGG | - | chr3.1:72014738-72014757 | MS.gene052917:intron | 45.0% | |
| TTCTTGAAAAGGGGGTCGAT+GGG | - | chr3.1:72012042-72012061 | MS.gene052917:CDS | 45.0% | |
| TTTCTGTTCTTTGGTTGGGG+TGG | + | chr3.1:72017133-72017152 | None:intergenic | 45.0% | |
| ! | AAGAAGGCCTTGAAAGTACG+TGG | - | chr3.1:72012225-72012244 | MS.gene052917:intron | 45.0% |
| ! | AAGAGACAGCAGCTGTGTTT+TGG | + | chr3.1:72012724-72012743 | None:intergenic | 45.0% |
| ! | AGAGACAGCAGCTGTGTTTT+GGG | + | chr3.1:72012723-72012742 | None:intergenic | 45.0% |
| ! | AGGGTGTTTAGGTTCCACAT+GGG | - | chr3.1:72014807-72014826 | MS.gene052917:CDS | 45.0% |
| ! | CAAGAAGCATGACACGTTTC+TGG | + | chr3.1:72016189-72016208 | None:intergenic | 45.0% |
| ! | GATGCATGGCAAGAAGCTTT+TGG | - | chr3.1:72013391-72013410 | MS.gene052917:intron | 45.0% |
| ! | GTTTGAGGAGGTGTGAAGAA+TGG | + | chr3.1:72013924-72013943 | None:intergenic | 45.0% |
| ! | TAAGCTGGTTGGTGTGAGAT+TGG | - | chr3.1:72015372-72015391 | MS.gene052917:CDS | 45.0% |
| ! | TCTGAAGTCTTCATGGGAGA+TGG | + | chr3.1:72016931-72016950 | None:intergenic | 45.0% |
| ! | TTATACTTTGAAGGTGGGGG+TGG | + | chr3.1:72017000-72017019 | None:intergenic | 45.0% |
| !! | AAGGGTGTTTAGGTTCCACA+TGG | - | chr3.1:72014806-72014825 | MS.gene052917:CDS | 45.0% |
| !! | CAGTGGTTCTGAAGTCTTCA+TGG | + | chr3.1:72016938-72016957 | None:intergenic | 45.0% |
| !! | CCAGACATGGCTTTGATAAG+AGG | - | chr3.1:72011812-72011831 | MS.gene052917:CDS | 45.0% |
| !! | GATGAGGAGCTTTTAGGTCT+GGG | - | chr3.1:72016301-72016320 | MS.gene052917:intron | 45.0% |
| !! | GATTTTAGAGAGGACGGCTT+CGG | + | chr3.1:72015711-72015730 | None:intergenic | 45.0% |
| !! | GCAACCAGTGATTTGCTCAT+TGG | - | chr3.1:72011610-72011629 | MS.gene052917:CDS | 45.0% |
| AATATGTCAGGGCGTGAAGG+AGG | - | chr3.1:72016126-72016145 | MS.gene052917:CDS | 50.0% | |
| ACAGGAGCTTGTGTATCCCA+GGG | + | chr3.1:72016970-72016989 | None:intergenic | 50.0% | |
| ACCTTAAGGCTGCATTTCGC+GGG | - | chr3.1:72014902-72014921 | MS.gene052917:CDS | 50.0% | |
| ACTGGCATCTTTGATGCTGG+TGG | + | chr3.1:72016697-72016716 | None:intergenic | 50.0% | |
| AGGTAGTAGTGGCATGAGGA+TGG | + | chr3.1:72016870-72016889 | None:intergenic | 50.0% | |
| AGTCAGATGCATCCGACCTT+AGG | - | chr3.1:72014003-72014022 | MS.gene052917:intron | 50.0% | |
| ATGATGACCACAGGCTAAGC+TGG | + | chr3.1:72013671-72013690 | None:intergenic | 50.0% | |
| ATTGGGGGAAAACTCCGCTT+GGG | + | chr3.1:72013420-72013439 | None:intergenic | 50.0% | |
| CACCTTAAGGCTGCATTTCG+CGG | - | chr3.1:72014901-72014920 | MS.gene052917:CDS | 50.0% | |
| CATGTGCGGAGAAGATAGGT+CGG | - | chr3.1:72012121-72012140 | MS.gene052917:CDS | 50.0% | |
| CTTCATGTGTAGGAGCCAAC+AGG | + | chr3.1:72015928-72015947 | None:intergenic | 50.0% | |
| GATAGGTCGGAGTGCGATTA+AGG | - | chr3.1:72012134-72012153 | MS.gene052917:CDS | 50.0% | |
| GATATCACCTCGGGGTCTTT+CGG | + | chr3.1:72015161-72015180 | None:intergenic | 50.0% | |
| GATGAGGTAGTAGTGGCATG+AGG | + | chr3.1:72016874-72016893 | None:intergenic | 50.0% | |
| GCATCTTTGATGCTGGTGGT+GGG | + | chr3.1:72016693-72016712 | None:intergenic | 50.0% | |
| GGATTAGGGCTAGAATGACG+AGG | + | chr3.1:72016814-72016833 | None:intergenic | 50.0% | |
| GGTAGTAGTGGCATGAGGAT+GGG | + | chr3.1:72016869-72016888 | None:intergenic | 50.0% | |
| GGTGATGCATACAAGGCAGA+AGG | - | chr3.1:72016751-72016770 | MS.gene052917:intron | 50.0% | |
| GTAGGAGCCAACAGGCATTA+AGG | + | chr3.1:72015920-72015939 | None:intergenic | 50.0% | |
| GTGCTAGTACCAGAGTAGAC+TGG | + | chr3.1:72016715-72016734 | None:intergenic | 50.0% | |
| GTTCATCCCTCATATGGGCA+TGG | - | chr3.1:72014842-72014861 | MS.gene052917:CDS | 50.0% | |
| TACTATACCACCATGTGCCC+AGG | - | chr3.1:72011999-72012018 | MS.gene052917:CDS | 50.0% | |
| TATTGGGGGAAAACTCCGCT+TGG | + | chr3.1:72013421-72013440 | None:intergenic | 50.0% | |
| TCAGCCGGACTTAAGTGTGA+GGG | - | chr3.1:72013348-72013367 | MS.gene052917:intron | 50.0% | |
| TGGACATGTGCGGAGAAGAT+AGG | - | chr3.1:72012117-72012136 | MS.gene052917:CDS | 50.0% | |
| TTCGGAAACCAGAGTCAGTG+AGG | - | chr3.1:72016650-72016669 | MS.gene052917:intron | 50.0% | |
| TTCGTCTACTGACAGCTTGC+TGG | - | chr3.1:72017077-72017096 | MS.gene052917:intron | 50.0% | |
| TTTGAATCCGAAAGACCCCG+AGG | - | chr3.1:72015151-72015170 | MS.gene052917:intron | 50.0% | |
| ! | CATCTTTGATGCTGGTGGTG+GGG | + | chr3.1:72016692-72016711 | None:intergenic | 50.0% |
| ! | GCATGGCAAGAAGCTTTTGG+AGG | - | chr3.1:72013394-72013413 | MS.gene052917:intron | 50.0% |
| ! | GGGTGTTTAGGTTCCACATG+GGG | - | chr3.1:72014808-72014827 | MS.gene052917:CDS | 50.0% |
| ! | TAGCGGATGAGGTGGGATTA+GGG | + | chr3.1:72016828-72016847 | None:intergenic | 50.0% |
| ! | TCGTCTACTGACAGCTTGCT+GGG | - | chr3.1:72017078-72017097 | MS.gene052917:intron | 50.0% |
| !! | ATAGCGGATGAGGTGGGATT+AGG | + | chr3.1:72016829-72016848 | None:intergenic | 50.0% |
| !! | ATCTTTGATGCTGGTGGTGG+GGG | + | chr3.1:72016691-72016710 | None:intergenic | 50.0% |
| !! | CTAGGAATAGCGGATGAGGT+GGG | + | chr3.1:72016835-72016854 | None:intergenic | 50.0% |
| !! | CTCTCTAGGAATAGCGGATG+AGG | + | chr3.1:72016839-72016858 | None:intergenic | 50.0% |
| !! | CTGTTGGCTCCTACACATGA+AGG | - | chr3.1:72015926-72015945 | MS.gene052917:intron | 50.0% |
| !! | GAGTTCATCCTCACTGACTC+TGG | + | chr3.1:72016661-72016680 | None:intergenic | 50.0% |
| !! | GGAGCTTTTAGGTCTGGGAT+TGG | - | chr3.1:72016306-72016325 | MS.gene052917:intron | 50.0% |
| !! | GGATGAGGAGCTTTTAGGTC+TGG | - | chr3.1:72016300-72016319 | MS.gene052917:intron | 50.0% |
| !! | GGATGGGTTGAAGACTCTCT+AGG | + | chr3.1:72016853-72016872 | None:intergenic | 50.0% |
| !! | GTTGAAGGAGTACTCGCTGA+AGG | + | chr3.1:72016345-72016364 | None:intergenic | 50.0% |
| !! | GTTTCTGGTAAGAACGGCAC+TGG | + | chr3.1:72016174-72016193 | None:intergenic | 50.0% |
| !! | TCTAGGAATAGCGGATGAGG+TGG | + | chr3.1:72016836-72016855 | None:intergenic | 50.0% |
| !!! | AGGGCTGGCTGATGTTTTGA+CGG | - | chr3.1:72015115-72015134 | MS.gene052917:intron | 50.0% |
| ACCACAGGCTAAGCTGGTGA+TGG | + | chr3.1:72013665-72013684 | None:intergenic | 55.0% | |
| ACCATGTGCCCAGGTCCTAT+GGG | - | chr3.1:72012008-72012027 | MS.gene052917:CDS | 55.0% | |
| ACCCGCGAAATGCAGCCTTA+AGG | + | chr3.1:72014906-72014925 | None:intergenic | 55.0% | |
| AGGTCGGAGTGCGATTAAGG+AGG | - | chr3.1:72012137-72012156 | MS.gene052917:CDS | 55.0% | |
| AGTGAAGGGGTTAGGAGGTG+AGG | - | chr3.1:72015755-72015774 | MS.gene052917:intron | 55.0% | |
| CGCGAAATGCAGCCTTAAGG+TGG | + | chr3.1:72014903-72014922 | None:intergenic | 55.0% | |
| CTCAGCCGGACTTAAGTGTG+AGG | - | chr3.1:72013347-72013366 | MS.gene052917:intron | 55.0% | |
| GACAGGAGCTTGTGTATCCC+AGG | + | chr3.1:72016971-72016990 | None:intergenic | 55.0% | |
| GGAGTGCGATTAAGGAGGGT+AGG | - | chr3.1:72012142-72012161 | MS.gene052917:CDS | 55.0% | |
| GGCATCTTTGATGCTGGTGG+TGG | + | chr3.1:72016694-72016713 | None:intergenic | 55.0% | |
| GGTCGGAGTGCGATTAAGGA+GGG | - | chr3.1:72012138-72012157 | MS.gene052917:CDS | 55.0% | |
| TCCATCACCAGCTTAGCCTG+TGG | - | chr3.1:72013661-72013680 | MS.gene052917:CDS | 55.0% | |
| TCGGTGTAGGACACCAGACA+TGG | - | chr3.1:72011799-72011818 | MS.gene052917:CDS | 55.0% | |
| TGAAAAGGGGGTCGATGGGA+CGG | - | chr3.1:72012046-72012065 | MS.gene052917:CDS | 55.0% | |
| TTAGAGAGGACGGCTTCGGA+GGG | + | chr3.1:72015707-72015726 | None:intergenic | 55.0% | |
| TTTAGAGAGGACGGCTTCGG+AGG | + | chr3.1:72015708-72015727 | None:intergenic | 55.0% | |
| ! | GGCTGCATTTCGCGGGTTTT+TGG | - | chr3.1:72014909-72014928 | MS.gene052917:CDS | 55.0% |
| !! | GAAGCTTTTGGAGGCCCAAG+CGG | - | chr3.1:72013403-72013422 | MS.gene052917:intron | 55.0% |
| ACCCATAGGACCTGGGCACA+TGG | + | chr3.1:72012012-72012031 | None:intergenic | 60.0% | |
| CACCATGTGCCCAGGTCCTA+TGG | - | chr3.1:72012007-72012026 | MS.gene052917:CDS | 60.0% | |
| CATAGGACCTGGGCACATGG+TGG | + | chr3.1:72012009-72012028 | None:intergenic | 60.0% | |
| GAAAAGGGGGTCGATGGGAC+GGG | - | chr3.1:72012047-72012066 | MS.gene052917:CDS | 60.0% | |
| GCTTGTGTATCCCAGGGAGC+TGG | + | chr3.1:72016964-72016983 | None:intergenic | 60.0% | |
| TGTGTATCCCAGGGAGCTGG+AGG | + | chr3.1:72016961-72016980 | None:intergenic | 60.0% | |
| AACCACTGCCTCCAGCTCCC+TGG | - | chr3.1:72016950-72016969 | MS.gene052917:intron | 65.0% | |
| ACCACTGCCTCCAGCTCCCT+GGG | - | chr3.1:72016951-72016970 | MS.gene052917:intron | 65.0% | |
| GGTGGGGGTGGAATCACGAC+AGG | + | chr3.1:72016988-72017007 | None:intergenic | 65.0% | |
| TCCCAGGGAGCTGGAGGCAG+TGG | + | chr3.1:72016955-72016974 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 72011577 | 72017239 | 72011577 | ID=MS.gene052917 |
| chr3.1 | mRNA | 72011577 | 72017239 | 72011577 | ID=MS.gene052917.t1;Parent=MS.gene052917 |
| chr3.1 | exon | 72017130 | 72017239 | 72017130 | ID=MS.gene052917.t1.exon1;Parent=MS.gene052917.t1 |
| chr3.1 | CDS | 72017130 | 72017239 | 72017130 | ID=cds.MS.gene052917.t1;Parent=MS.gene052917.t1 |
| chr3.1 | exon | 72016070 | 72016148 | 72016070 | ID=MS.gene052917.t1.exon2;Parent=MS.gene052917.t1 |
| chr3.1 | CDS | 72016070 | 72016148 | 72016070 | ID=cds.MS.gene052917.t1;Parent=MS.gene052917.t1 |
| chr3.1 | exon | 72015582 | 72015680 | 72015582 | ID=MS.gene052917.t1.exon3;Parent=MS.gene052917.t1 |
| chr3.1 | CDS | 72015582 | 72015680 | 72015582 | ID=cds.MS.gene052917.t1;Parent=MS.gene052917.t1 |
| chr3.1 | exon | 72015351 | 72015464 | 72015351 | ID=MS.gene052917.t1.exon4;Parent=MS.gene052917.t1 |
| chr3.1 | CDS | 72015351 | 72015464 | 72015351 | ID=cds.MS.gene052917.t1;Parent=MS.gene052917.t1 |
| chr3.1 | exon | 72014792 | 72014937 | 72014792 | ID=MS.gene052917.t1.exon5;Parent=MS.gene052917.t1 |
| chr3.1 | CDS | 72014792 | 72014937 | 72014792 | ID=cds.MS.gene052917.t1;Parent=MS.gene052917.t1 |
| chr3.1 | exon | 72013644 | 72013725 | 72013644 | ID=MS.gene052917.t1.exon6;Parent=MS.gene052917.t1 |
| chr3.1 | CDS | 72013644 | 72013725 | 72013644 | ID=cds.MS.gene052917.t1;Parent=MS.gene052917.t1 |
| chr3.1 | exon | 72012595 | 72012680 | 72012595 | ID=MS.gene052917.t1.exon7;Parent=MS.gene052917.t1 |
| chr3.1 | CDS | 72012595 | 72012680 | 72012595 | ID=cds.MS.gene052917.t1;Parent=MS.gene052917.t1 |
| chr3.1 | exon | 72012325 | 72012516 | 72012325 | ID=MS.gene052917.t1.exon8;Parent=MS.gene052917.t1 |
| chr3.1 | CDS | 72012325 | 72012516 | 72012325 | ID=cds.MS.gene052917.t1;Parent=MS.gene052917.t1 |
| chr3.1 | exon | 72011577 | 72012192 | 72011577 | ID=MS.gene052917.t1.exon9;Parent=MS.gene052917.t1 |
| chr3.1 | CDS | 72011577 | 72012192 | 72011577 | ID=cds.MS.gene052917.t1;Parent=MS.gene052917.t1 |
| Gene Sequence |
| Protein sequence |
