AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene69634

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene69634.t1 MTR_5g028450 78.878 303 63 1 549 851 1 302 1.49e-164 480
MS.gene69634.t1 MTR_5g028190 61.127 355 128 4 491 843 185 531 1.77e-143 435
MS.gene69634.t1 MTR_5g028190 47.945 219 86 5 205 421 5 197 3.91e-45 171
MS.gene69634.t1 MTR_5g028510 68.770 317 92 3 107 422 18 328 1.46e-139 417
MS.gene69634.t1 MTR_5g028130 55.718 341 140 4 508 843 1 335 5.42e-125 380
MS.gene69634.t1 MTR_5g028930 54.674 353 158 2 498 849 270 621 3.92e-124 387
MS.gene69634.t1 MTR_5g028930 48.432 287 120 10 126 407 1 264 6.30e-61 218
MS.gene69634.t1 MTR_5g028690 57.282 206 86 2 647 851 38 242 1.38e-72 238
MS.gene69634.t1 MTR_2g438740 41.017 295 166 3 552 844 279 567 2.49e-62 221
MS.gene69634.t1 MTR_5g028830 41.781 292 137 7 366 649 22 288 1.02e-57 199
MS.gene69634.t1 MTR_5g091220 28.095 630 357 13 219 846 69 604 1.98e-57 208
MS.gene69634.t1 MTR_5g028110 52.604 192 68 3 652 843 4 172 7.78e-56 190
MS.gene69634.t1 MTR_3g055310 33.851 322 206 4 505 825 12 327 1.01e-55 196
MS.gene69634.t1 MTR_2g438440 38.926 298 177 3 547 844 394 686 1.88e-55 204
MS.gene69634.t1 MTR_3g055310 33.851 322 206 4 505 825 75 390 4.61e-55 196
MS.gene69634.t1 MTR_3g055310 33.851 322 206 4 505 825 155 470 1.79e-54 197
MS.gene69634.t1 MTR_3g055310 33.851 322 206 4 505 825 127 442 2.03e-54 196
MS.gene69634.t1 MTR_3g055310 33.851 322 206 4 505 825 153 468 3.34e-54 196
MS.gene69634.t1 MTR_3g055310 33.851 322 206 4 505 825 180 495 4.62e-54 196
MS.gene69634.t1 MTR_6g017215 52.910 189 84 3 650 838 6 189 1.72e-52 183
MS.gene69634.t1 MTR_2g438720 38.462 299 178 3 547 844 399 692 7.11e-52 194
MS.gene69634.t1 MTR_2g438400 37.500 296 178 3 552 845 258 548 8.37e-52 191
MS.gene69634.t1 MTR_2g438700 38.206 301 176 5 547 844 397 690 4.07e-51 191
MS.gene69634.t1 MTR_2g438760 35.593 295 183 3 552 844 273 562 1.13e-49 185
MS.gene69634.t1 MTR_5g028840 46.078 204 108 2 650 852 2 204 6.78e-49 172
MS.gene69634.t1 MTR_2g020510 26.705 689 394 20 212 839 37 675 1.73e-48 184
MS.gene69634.t1 MTR_2g438640 36.913 298 183 2 547 844 399 691 3.37e-48 183
MS.gene69634.t1 MTR_2g020450 28.161 696 390 21 217 850 42 689 4.83e-48 182
MS.gene69634.t1 MTR_5g028900 55.357 168 61 4 651 817 3 157 6.10e-48 167
MS.gene69634.t1 MTR_3g455790 32.012 328 216 3 500 826 258 579 1.86e-47 179
MS.gene69634.t1 MTR_2g438640 35.235 298 162 3 547 844 399 665 1.69e-42 166
MS.gene69634.t1 MTR_2g017930 26.426 666 375 20 215 827 35 638 4.25e-42 164
MS.gene69634.t1 MTR_3g452020 30.503 318 214 3 509 825 92 403 2.41e-41 157
MS.gene69634.t1 MTR_3g452020 30.503 318 214 3 509 825 268 579 1.43e-40 159
MS.gene69634.t1 MTR_5g028920 53.793 145 63 2 509 652 86 227 5.80e-40 148
MS.gene69634.t1 MTR_2g020470 31.875 320 176 6 533 839 367 657 1.24e-38 154
MS.gene69634.t1 MTR_3g058570 32.781 302 189 4 548 842 83 377 4.04e-35 138
MS.gene69634.t1 MTR_5g085340 29.508 305 194 4 549 842 443 737 3.65e-31 131
MS.gene69634.t1 MTR_5g085360 27.485 342 202 7 549 852 405 738 2.38e-30 129
MS.gene69634.t1 MTR_5g085350 29.592 294 198 3 550 839 425 713 3.00e-30 128
MS.gene69634.t1 MTR_5g085350 29.492 295 199 3 549 839 437 726 3.19e-30 128
MS.gene69634.t1 MTR_2g438640 38.462 195 115 2 650 844 399 588 5.15e-30 126
MS.gene69634.t1 MTR_3g050500 28.179 291 198 5 548 832 427 712 4.98e-29 124
MS.gene69634.t1 MTR_3g051060 25.418 299 217 4 550 845 435 730 8.39e-26 114
MS.gene69634.t1 MTR_1g113820 29.675 246 169 3 547 790 274 517 9.32e-25 110
MS.gene69634.t1 MTR_2g438470 41.353 133 77 1 594 726 366 497 4.27e-23 104
MS.gene69634.t1 MTR_1g113760 28.839 267 180 6 540 799 231 494 1.70e-20 96.7
MS.gene69634.t1 MTR_1g113730 26.800 250 179 4 540 787 37 284 3.00e-18 87.8
MS.gene69634.t1 MTR_6g016185 28.972 214 128 7 561 772 6 197 5.04e-16 77.8
MS.gene69634.t1 MTR_2g438580 37.805 82 50 1 665 746 3 83 6.42e-12 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene69634.t1 AT3G18670 34.597 633 326 14 219 844 88 639 3.76e-104 336
MS.gene69634.t1 AT3G18670 44.083 338 183 5 508 844 252 584 1.15e-84 283
MS.gene69634.t1 AT3G18670 28.571 196 98 6 219 408 88 247 4.16e-12 70.5
MS.gene69634.t1 AT5G04700 31.754 633 331 19 219 844 118 656 8.08e-73 252
MS.gene69634.t1 AT5G04690 30.317 630 339 15 219 844 113 646 6.89e-71 247
MS.gene69634.t1 AT5G04690 29.683 630 329 16 219 844 113 632 7.02e-68 238
MS.gene69634.t1 AT5G04730 30.556 612 317 16 245 844 74 589 4.65e-67 235
MS.gene69634.t1 AT5G04680 30.864 648 354 21 219 844 105 680 1.89e-65 232
MS.gene69634.t1 AT5G04690 37.463 339 202 5 507 844 283 612 2.63e-61 219
MS.gene69634.t1 AT5G04680 37.784 352 198 7 506 844 185 528 5.76e-59 211
MS.gene69634.t1 AT5G04680 37.784 352 198 7 506 844 294 637 1.88e-58 212
MS.gene69634.t1 AT5G04680 37.784 352 198 7 506 844 308 651 2.93e-58 211
MS.gene69634.t1 AT5G35810 36.755 302 181 6 549 844 35 332 4.35e-58 202
MS.gene69634.t1 AT3G54065 43.694 222 107 5 636 851 8 217 6.77e-48 170
MS.gene69634.t1 AT5G04700 26.196 439 228 16 219 651 118 466 4.08e-20 95.1

Find 180 sgRNAs with CRISPR-Local

Find 393 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTTGAATCTGGGTCATTT+TGG 0.129048 5.3:+17921995 None:intergenic
ACTTACTTTCATAAATAATT+TGG 0.159583 5.3:+17919944 None:intergenic
CATTATCGACATGATCTTAA+AGG 0.186021 5.3:-17915682 MS.gene69634:CDS
TTTGGATTTGGTAGGGGTTT+TGG 0.189462 5.3:+17920361 None:intergenic
TTGTCCATCCTTCATCTTCT+TGG 0.196052 5.3:+17922104 None:intergenic
CAGTACGATTATCAGCATTT+TGG 0.197994 5.3:+17922136 None:intergenic
CAGAACAATTCTTTATTCTT+TGG 0.203069 5.3:+17920740 None:intergenic
GAGTATGATATTGCCGAAAT+TGG 0.213255 5.3:-17918540 MS.gene69634:CDS
AAGAGAGTTTCAATGGTTTA+AGG 0.229180 5.3:-17916608 MS.gene69634:intron
ATCTTCAGGGGCAAGGTCTA+TGG 0.241341 5.3:-17922170 MS.gene69634:CDS
CCATCTTTCATAGTTGTCTT+TGG 0.244233 5.3:+17922212 None:intergenic
GTACTACAATGAACCACTTA+TGG 0.252983 5.3:+17915649 None:intergenic
TGTATCACTGCTGAAATATT+TGG 0.253668 5.3:-17920290 MS.gene69634:intron
TTCCATTACCTAGATATTAA+TGG 0.258978 5.3:-17918003 MS.gene69634:intron
TACCATGCACTTTGCTATTT+CGG 0.263241 5.3:+17920499 None:intergenic
GCTGCAGCCTTTACAGTTCC+AGG 0.264273 5.3:-17915945 MS.gene69634:CDS
TAGAACAAACAGAGAGAAAA+AGG 0.268023 5.3:+17915727 None:intergenic
TACCGACCTTGCTCCAAATC+TGG 0.291922 5.3:+17921967 None:intergenic
ATGTTAGGGCAAGGCCTTCT+AGG 0.297090 5.3:-17921068 MS.gene69634:intron
GCGCTTGTTGCACGTTATAC+TGG 0.297367 5.3:-17920527 MS.gene69634:CDS
TCGACGGCTGAAAGAAAATT+AGG 0.299175 5.3:+17916832 None:intergenic
CAAAACTCGATTCTGTGAAT+TGG 0.302690 5.3:+17920325 None:intergenic
TCTGGGGCAGCTCTTGAATC+TGG 0.304986 5.3:+17921985 None:intergenic
TTCAAGAGCTGCCCCAGATT+TGG 0.307698 5.3:-17921980 MS.gene69634:CDS
GTTGTTCGAATAATGCTTTC+CGG 0.310295 5.3:-17918411 MS.gene69634:intron
AATCATTTAGGCTCATTATA+TGG 0.310793 5.3:-17920903 MS.gene69634:CDS
GGCACCCAATTGGGATTTCT+AGG 0.327771 5.3:-17919967 MS.gene69634:CDS
TTTACGTACCATTAATATCT+AGG 0.332285 5.3:+17917995 None:intergenic
TATATATGACATCGGCTTCC+AGG 0.333476 5.3:-17920667 MS.gene69634:CDS
TCGGACGAAGTTCCCAATTT+CGG 0.335617 5.3:+17918527 None:intergenic
GTGCATGGTAGAGGAAATAA+AGG 0.338215 5.3:-17920486 MS.gene69634:CDS
TTTGTCAAACACTTTGGATT+TGG 0.339806 5.3:+17920349 None:intergenic
TAAATGATTCCAGGCGCTTT+TGG 0.340866 5.3:+17920917 None:intergenic
CCGTGGAGTTGCATATTTGT+TGG 0.349278 5.3:-17918034 MS.gene69634:CDS
TCTCCGTCCCTACGTTGTTA+AGG 0.349696 5.3:-17920104 MS.gene69634:CDS
CTCCGTCCCTACGTTGTTAA+GGG 0.352434 5.3:-17920103 MS.gene69634:CDS
TTGCACCTGGCAGCACATTT+AGG 0.353776 5.3:-17916679 MS.gene69634:CDS
ATTCTTCTAGCTGCCGCTAA+TGG 0.360168 5.3:-17920413 MS.gene69634:CDS
TGTTATGCAAAACTATCTTC+AGG 0.365102 5.3:-17922184 MS.gene69634:CDS
ATTTATCAGGTAAGGATTGC+TGG 0.365909 5.3:+17920037 None:intergenic
CAAAGAATAAAGAATTGTTC+TGG 0.367690 5.3:-17920739 MS.gene69634:CDS
TACTACAATGAACCACTTAT+GGG 0.368135 5.3:+17915650 None:intergenic
CATATGAAAATATGCCTCTA+TGG 0.369293 5.3:+17916803 None:intergenic
TACACACATTATGAAGTTAT+AGG 0.373654 5.3:-17916991 MS.gene69634:CDS
ACTAAGGCCGAGAATTTATC+AGG 0.379921 5.3:+17920024 None:intergenic
TGATGCATCATGGAAAATAA+AGG 0.382865 5.3:-17921015 MS.gene69634:CDS
TTGCCTTGGAAGTTATTGTT+TGG 0.387767 5.3:-17915759 MS.gene69634:CDS
CTTTAAGATCATGTCGATAA+TGG 0.388292 5.3:+17915683 None:intergenic
TTTGGCCTAGAAATCCCAAT+TGG 0.395842 5.3:+17919962 None:intergenic
TTTCCAAGTGGCACCCAATT+GGG 0.405636 5.3:-17919976 MS.gene69634:CDS
GCAACATCTTATACAATTGT+AGG 0.407639 5.3:-17915993 MS.gene69634:CDS
CTTCAATTATGTCAGGAATC+AGG 0.410277 5.3:-17917032 MS.gene69634:intron
TTTCAAATTCTGAAACAGTC+TGG 0.425070 5.3:+17921039 None:intergenic
CAGTCTGGATAACGCCTAGA+AGG 0.426486 5.3:+17921054 None:intergenic
TTAGCGGCAGCTAGAAGAAT+AGG 0.427359 5.3:+17920416 None:intergenic
GAACTCGATTATTCCGTGTT+GGG 0.428128 5.3:+17916879 None:intergenic
CTTCACGCAGCAGTGATTGC+TGG 0.431090 5.3:-17920635 MS.gene69634:CDS
CTTTCAATGAATATCTCATA+AGG 0.433992 5.3:+17916062 None:intergenic
GGTGGAAACGACGACAAAAC+TGG 0.435847 5.3:-17915924 MS.gene69634:CDS
ATCCTTACCTGATAAATTCT+CGG 0.437868 5.3:-17920031 MS.gene69634:CDS
ATTGGATTTGTCAAACACTT+TGG 0.438556 5.3:+17920343 None:intergenic
TAGTGAAAGATGGAGAGAAA+TGG 0.438852 5.3:-17916028 MS.gene69634:CDS
ATTATCGACATGATCTTAAA+GGG 0.440142 5.3:-17915681 MS.gene69634:CDS
GATATTACAAGAACGATAAT+CGG 0.441300 5.3:+17915603 None:intergenic
TGCTGATAATCGTACTGATC+AGG 0.442862 5.3:-17922130 MS.gene69634:CDS
CAGCAACACATGTTACCTTT+CGG 0.444549 5.3:+17918508 None:intergenic
TACCATTAATATCTAGGTAA+TGG 0.446682 5.3:+17918001 None:intergenic
TGCAGAAGCCTCTTTGAGCT+TGG 0.447470 5.3:+17916924 None:intergenic
AAATGCAAAGAGAGTTTCAA+TGG 0.447934 5.3:-17916615 MS.gene69634:CDS
AGTATGATATTGCCGAAATT+GGG 0.448600 5.3:-17918539 MS.gene69634:CDS
TAATGAGCCTAAATGATTCC+AGG 0.455349 5.3:+17920908 None:intergenic
CCCAGAAACGTTGCTAGAAA+AGG 0.455513 5.3:-17920459 MS.gene69634:CDS
GTGATGAGAGGTACGCCTAT+TGG 0.457145 5.3:-17920713 MS.gene69634:CDS
GGTACGCCTATTGGAAATAT+CGG 0.457767 5.3:-17920704 MS.gene69634:CDS
ACCGACCTTGCTCCAAATCT+GGG 0.458528 5.3:+17921968 None:intergenic
AGTAGTATGATGAAATCAAC+AGG 0.460104 5.3:-17922270 None:intergenic
GGCCGAGAATTTATCAGGTA+AGG 0.460680 5.3:+17920029 None:intergenic
CAACTCATACATTCTGTCAA+TGG 0.460886 5.3:-17916751 MS.gene69634:CDS
TCATTTGTTTATTGAACGGA+TGG 0.471650 5.3:+17915533 None:intergenic
TTAAAACAGCCAAAAGCGCC+TGG 0.474873 5.3:-17920926 MS.gene69634:CDS
AAAAGCGCCTGGAATCATTT+AGG 0.476909 5.3:-17920915 MS.gene69634:CDS
ATTCTCGGCCTTAGTTGCAT+TGG 0.477418 5.3:-17920016 MS.gene69634:CDS
GTTATGCAAAACTATCTTCA+GGG 0.481695 5.3:-17922183 MS.gene69634:CDS
AGACATCGTATAGACTCGTT+TGG 0.481995 5.3:-17916712 MS.gene69634:CDS
CAATTCTTTGTGTCCATTAG+CGG 0.484696 5.3:+17920400 None:intergenic
TTGCATTTGCAGAGCAGCAC+CGG 0.486301 5.3:+17916630 None:intergenic
TGTGGAAAATGTGGAATTGT+TGG 0.486891 5.3:-17920609 MS.gene69634:CDS
CAAACACTTTGGATTTGGTA+GGG 0.489668 5.3:+17920354 None:intergenic
GTCGTCATTTGTTTATTGAA+CGG 0.491644 5.3:+17915529 None:intergenic
TATATTGATAATGATTGCTC+GGG 0.495481 5.3:+17920132 None:intergenic
CTGGGGCAGCTCTTGAATCT+GGG 0.496567 5.3:+17921986 None:intergenic
AGTGAAAGATGGAGAGAAAT+GGG 0.498200 5.3:-17916027 MS.gene69634:CDS
ATATATTGATAATGATTGCT+CGG 0.502639 5.3:+17920131 None:intergenic
CCTTTCTGCCTATGCCACAT+TGG 0.504501 5.3:+17918445 None:intergenic
TCAACAGGTGTTGCCTCTGA+TGG 0.509585 5.3:-17922255 MS.gene69634:CDS
TGAACTCGATTATTCCGTGT+TGG 0.510589 5.3:+17916878 None:intergenic
CCAAAGACAACTATGAAAGA+TGG 0.511353 5.3:-17922212 MS.gene69634:CDS
AATCCCAATTGGGTGCCACT+TGG 0.512054 5.3:+17919973 None:intergenic
ACTTTCTCAAGAGCTTGCCT+TGG 0.512356 5.3:-17915773 MS.gene69634:CDS
TGCTGGAAATGTGGAAAATG+TGG 0.512870 5.3:-17920618 MS.gene69634:CDS
ATACTCCCAAGTGCCATGAT+TGG 0.513042 5.3:+17915627 None:intergenic
CATCTTTCACTAGCTCCTCA+TGG 0.514505 5.3:+17916039 None:intergenic
TCTTCAGGGGCAAGGTCTAT+GGG 0.515721 5.3:-17922169 MS.gene69634:CDS
TATGGCAAAGATTTAACAGC+CGG 0.518073 5.3:-17920885 MS.gene69634:CDS
TATCGTTCTTGTAATATCAC+AGG 0.519358 5.3:-17915598 MS.gene69634:CDS
TAGCGGCAGCTAGAAGAATA+GGG 0.520879 5.3:+17920417 None:intergenic
AGTTACTTCTGCCGAAGTGT+TGG 0.521693 5.3:-17916961 MS.gene69634:CDS
AATAGCAAAGTGCATGGTAG+AGG 0.523953 5.3:-17920495 MS.gene69634:CDS
TATGTTGTCATGTAAGAAGA+TGG 0.525735 5.3:+17915896 None:intergenic
TCTGATCGTCATAGCAGATC+CGG 0.526463 5.3:-17916649 MS.gene69634:CDS
TCAGGTAAGGATTGCTGGAG+AGG 0.527967 5.3:+17920042 None:intergenic
ATTCTTTATTCTTTGGAGAG+TGG 0.532153 5.3:+17920747 None:intergenic
TCAAACACTTTGGATTTGGT+AGG 0.534684 5.3:+17920353 None:intergenic
GCCTCTATGGCAGCTATCGA+CGG 0.536236 5.3:+17916816 None:intergenic
AAACACTTTGGATTTGGTAG+GGG 0.540428 5.3:+17920355 None:intergenic
TGGCAATAACTTGTTGCACC+TGG 0.540571 5.3:-17916692 MS.gene69634:CDS
CATATTCACTGCATTTCTCA+TGG 0.544524 5.3:-17915877 MS.gene69634:CDS
AATTTGAAACTGATGCATCA+TGG 0.545997 5.3:-17921025 MS.gene69634:CDS
TGGAATTGTTGGTGAAAGTA+GGG 0.547426 5.3:-17920598 MS.gene69634:CDS
TCCATACCGATATTTCCAAT+AGG 0.548152 5.3:+17920698 None:intergenic
CCAATGTGGCATAGGCAGAA+AGG 0.549410 5.3:-17918445 MS.gene69634:CDS
TGCGTGAAGAAGCGAAGACC+TGG 0.551193 5.3:+17920649 None:intergenic
CATGAGGAGCTAGTGAAAGA+TGG 0.552759 5.3:-17916038 MS.gene69634:CDS
TTGGCCTAGAAATCCCAATT+GGG 0.552989 5.3:+17919963 None:intergenic
CTGCTATGACGATCAGATGA+AGG 0.554930 5.3:+17916655 None:intergenic
GTTCATTGTAGTACCAATCA+TGG 0.555376 5.3:-17915640 MS.gene69634:CDS
AATTGGGAACTTCGTCCGAA+AGG 0.555672 5.3:-17918523 MS.gene69634:CDS
GCCTATTGGAAATATCGGTA+TGG 0.560203 5.3:-17920699 MS.gene69634:CDS
ATGATTCCCTTAACAACGTA+GGG 0.560792 5.3:+17920097 None:intergenic
ACCTTGTTCATGATCTGCAC+CGG 0.561022 5.3:+17920866 None:intergenic
TTACTTTGTAAGATATTCCG+TGG 0.561493 5.3:-17918051 MS.gene69634:CDS
GTTTCCACCTGGAACTGTAA+AGG 0.563160 5.3:+17915938 None:intergenic
CATTTGTTTATTGAACGGAT+GGG 0.564108 5.3:+17915534 None:intergenic
TTGCAGATTTGAGCGTGGAA+AGG 0.566854 5.3:-17918575 MS.gene69634:intron
AGACCAAACAATAACTTCCA+AGG 0.568693 5.3:+17915756 None:intergenic
TAATAGTTCCAAGCTCAAAG+AGG 0.570868 5.3:-17916932 MS.gene69634:CDS
GTGCCACTTGGAAAAGATGT+AGG 0.572327 5.3:+17919985 None:intergenic
CGAGTTCATAAATGCCATGA+GGG 0.573679 5.3:-17916863 MS.gene69634:CDS
AAGGAAGCCGAAAATGATGA+TGG 0.573881 5.3:-17916092 MS.gene69634:CDS
AGGGATATGAAACCCATAAG+TGG 0.578644 5.3:-17915662 MS.gene69634:CDS
GAATAAAGAATTGTTCTGGA+AGG 0.580301 5.3:-17920735 MS.gene69634:CDS
GTGGAATTGTTGGTGAAAGT+AGG 0.581941 5.3:-17920599 MS.gene69634:CDS
GTAGTACCAATCATGGCACT+TGG 0.582602 5.3:-17915633 MS.gene69634:CDS
TGCATGGTAGAGGAAATAAA+GGG 0.582858 5.3:-17920485 MS.gene69634:CDS
TCCGCAGTCCAATGTGGCAT+AGG 0.583947 5.3:-17918453 MS.gene69634:CDS
CAAAACTATCTTCAGGGGCA+AGG 0.584923 5.3:-17922177 MS.gene69634:CDS
TCAGGCTTCCAAGAAGATGA+AGG 0.586986 5.3:-17922112 MS.gene69634:CDS
ATGTTGTCATGTAAGAAGAT+GGG 0.590707 5.3:+17915897 None:intergenic
ATGAAATCTTCCGCTCAACA+TGG 0.593061 5.3:-17915563 MS.gene69634:CDS
GCTTCCAAGAAGATGAAGGA+TGG 0.601738 5.3:-17922108 MS.gene69634:CDS
CATATCATTCAACTATCATG+TGG 0.604069 5.3:-17920978 MS.gene69634:CDS
GCTGCCCCAGATTTGGAGCA+AGG 0.605489 5.3:-17921973 MS.gene69634:intron
TTATGCAAAACTATCTTCAG+GGG 0.609385 5.3:-17922182 MS.gene69634:CDS
TACCGAAATAGCAAAGTGCA+TGG 0.611483 5.3:-17920501 MS.gene69634:CDS
CTCGAATGTATATATGACAT+CGG 0.616856 5.3:-17920675 MS.gene69634:CDS
ACATTCTGTCAATGGACGGA+AGG 0.617474 5.3:-17916743 MS.gene69634:CDS
ATTAGGATTAGCGTCCCTCA+TGG 0.619621 5.3:+17916849 None:intergenic
GCCTATGCCACATTGGACTG+CGG 0.623841 5.3:+17918452 None:intergenic
TAGTACCAATCATGGCACTT+GGG 0.623895 5.3:-17915632 MS.gene69634:CDS
TTCCCTTAACAACGTAGGGA+CGG 0.626973 5.3:+17920101 None:intergenic
AAGGACCTAAATGTGCTGCC+AGG 0.631007 5.3:+17916674 None:intergenic
GCCGTCGATAGCTGCCATAG+AGG 0.633165 5.3:-17916817 MS.gene69634:CDS
AATGATTCCCTTAACAACGT+AGG 0.635342 5.3:+17920096 None:intergenic
TCATACATTCTGTCAATGGA+CGG 0.635424 5.3:-17916747 MS.gene69634:CDS
TTGATGAACTATTCCATCAG+AGG 0.645567 5.3:+17922242 None:intergenic
CCAACAAATATGCAACTCCA+CGG 0.652186 5.3:+17918034 None:intergenic
AGCAGTGATTGCTGGAAATG+TGG 0.655602 5.3:-17920627 MS.gene69634:CDS
TTTCATTGCAGATTTGAGCG+TGG 0.657835 5.3:-17918580 MS.gene69634:intron
TATACCAATGAAAATCAAGA+CGG 0.658060 5.3:+17915821 None:intergenic
ATATGCATGCAAGACGAACA+CGG 0.664176 5.3:-17920563 MS.gene69634:CDS
ATGTTGCATGCATCCCAACA+CGG 0.665878 5.3:-17916892 MS.gene69634:CDS
TTGTTCTGGAAGGTGATGAG+AGG 0.672631 5.3:-17920725 MS.gene69634:CDS
AAAGGCTGCAGCAAACATGA+TGG 0.673254 5.3:+17915956 None:intergenic
CCGACCTTGCTCCAAATCTG+GGG 0.679024 5.3:+17921969 None:intergenic
GCCGGTGCAGATCATGAACA+AGG 0.680709 5.3:-17920867 MS.gene69634:intron
TCGAGTTCATAAATGCCATG+AGG 0.690060 5.3:-17916864 MS.gene69634:CDS
GCAGCCTTTACAGTTCCAGG+TGG 0.696330 5.3:-17915942 MS.gene69634:CDS
ATTTCTTCCGCAGTCCAATG+TGG 0.705212 5.3:-17918459 MS.gene69634:CDS
GGCTGCAGCAAACATGATGG+TGG 0.726270 5.3:+17915959 None:intergenic
GATATTCATTGAAAGCCATG+AGG 0.729208 5.3:-17916054 MS.gene69634:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATATCAAAAATATTTAGA+GGG + chr5.3:17916697-17916716 None:intergenic 10.0%
!! AAGATTAATAGTAATTTATA+TGG + chr5.3:17916329-17916348 None:intergenic 10.0%
!! AAGTATTATAAAAAATTGTT+AGG + chr5.3:17916229-17916248 None:intergenic 10.0%
!! AATATTTAACTATCATTATA+TGG + chr5.3:17918923-17918942 None:intergenic 10.0%
!! ATAAATATAATATGATACAA+TGG - chr5.3:17918455-17918474 MS.gene69634:CDS 10.0%
!! TTTATAAAATGTAATCTAAA+AGG + chr5.3:17921313-17921332 None:intergenic 10.0%
!!! AAATATTTTCTTTTTAAAAG+AGG + chr5.3:17919188-17919207 None:intergenic 10.0%
!!! TAAAAATGAGTTAATTTTTT+TGG - chr5.3:17921446-17921465 MS.gene69634:intron 10.0%
!!! TATTCTATTTTTTTCAATAA+TGG - chr5.3:17916015-17916034 MS.gene69634:CDS 10.0%
!! AACATAATTACTAATATAGT+TGG - chr5.3:17920574-17920593 MS.gene69634:CDS 15.0%
!! ACTTACTTTCATAAATAATT+TGG + chr5.3:17917856-17917875 None:intergenic 15.0%
!! ATAGTTTAAATAAAGTTAGA+TGG - chr5.3:17917949-17917968 MS.gene69634:intron 15.0%
!! GAAATATCAAAAATATTTAG+AGG + chr5.3:17916698-17916717 None:intergenic 15.0%
!! GTAATAAAATATTTGAATAG+AGG - chr5.3:17918970-17918989 MS.gene69634:intron 15.0%
!! TAAATTTATATTATTCCTTC+CGG - chr5.3:17918760-17918779 MS.gene69634:intron 15.0%
!! TATACTGTAATTAAATAGAT+TGG + chr5.3:17921609-17921628 None:intergenic 15.0%
!! TATATTAGTAATTATGTTGT+AGG + chr5.3:17920572-17920591 None:intergenic 15.0%
!! TATTATCATATTACTAACTT+AGG + chr5.3:17918133-17918152 None:intergenic 15.0%
!! TCAATTAATATAAAAAGAAG+CGG - chr5.3:17918308-17918327 MS.gene69634:intron 15.0%
!! TTGTCATAAAATTAAGTTTA+TGG + chr5.3:17916979-17916998 None:intergenic 15.0%
!!! ACTATTAATCTTTATTTTGA+TGG - chr5.3:17916337-17916356 MS.gene69634:intron 15.0%
!!! ACTTTTTTATAAGAGAAAAA+CGG + chr5.3:17918870-17918889 None:intergenic 15.0%
!!! ATATCAATTGTTATTAGTAT+TGG + chr5.3:17920443-17920462 None:intergenic 15.0%
!!! ATTAATGAGTTTTTTTTTAC+TGG + chr5.3:17919864-17919883 None:intergenic 15.0%
!!! TTATCTTTTATAAAAAGAAC+CGG + chr5.3:17918782-17918801 None:intergenic 15.0%
!! AAACTAAAAGTAAAATGTGT+TGG + chr5.3:17916258-17916277 None:intergenic 20.0%
!! AAATTAAATGATGAATCGTT+CGG - chr5.3:17918548-17918567 MS.gene69634:CDS 20.0%
!! AATTGCAACATAAACAAATT+TGG + chr5.3:17916303-17916322 None:intergenic 20.0%
!! ATAATATGATACAATGGTTA+TGG - chr5.3:17918461-17918480 MS.gene69634:CDS 20.0%
!! CAATTAATATAAAAAGAAGC+GGG - chr5.3:17918309-17918328 MS.gene69634:intron 20.0%
!! CCATTTATATATATTCATGT+AGG + chr5.3:17919532-17919551 None:intergenic 20.0%
!! CCTACATGAATATATATAAA+TGG - chr5.3:17919529-17919548 MS.gene69634:intron 20.0%
!! TAAATTTGATAGAAACAACA+AGG - chr5.3:17916411-17916430 MS.gene69634:intron 20.0%
!! TAATCTGAATAGTATCTATT+GGG + chr5.3:17918002-17918021 None:intergenic 20.0%
!! TAATTAAAAGTTAAAGTCCT+TGG + chr5.3:17916460-17916479 None:intergenic 20.0%
!! TCAAATAAGTTTAAAAGTTG+CGG + chr5.3:17916501-17916520 None:intergenic 20.0%
!! TGAAGACAATTAATTTAGAT+GGG + chr5.3:17921218-17921237 None:intergenic 20.0%
!! TGAATGAATGTAGAAAAATT+GGG + chr5.3:17916053-17916072 None:intergenic 20.0%
!! TTAAAAGAGGTTTATTCAAA+TGG + chr5.3:17919175-17919194 None:intergenic 20.0%
!! TTAATCTGAATAGTATCTAT+TGG + chr5.3:17918003-17918022 None:intergenic 20.0%
!! TTGAAGACAATTAATTTAGA+TGG + chr5.3:17921219-17921238 None:intergenic 20.0%
!! TTGAATGAATGTAGAAAAAT+TGG + chr5.3:17916054-17916073 None:intergenic 20.0%
!! TTGTATATACGATCAAATAT+TGG - chr5.3:17920297-17920316 MS.gene69634:CDS 20.0%
!!! AAATATGGTTCAATATTTTG+CGG + chr5.3:17920535-17920554 None:intergenic 20.0%
!!! AGGACTTTAACTTTTAATTA+AGG - chr5.3:17916460-17916479 MS.gene69634:intron 20.0%
!!! ATATATTGATAATGATTGCT+CGG + chr5.3:17917669-17917688 None:intergenic 20.0%
!!! CTTTTTTTTATTCAAATGTG+TGG - chr5.3:17917588-17917607 MS.gene69634:intron 20.0%
!!! GTATGTTGTTAATTTCTTTT+TGG - chr5.3:17917550-17917569 MS.gene69634:intron 20.0%
!!! TACTTTTTTTAATCAAACCA+AGG - chr5.3:17916440-17916459 MS.gene69634:intron 20.0%
!!! TATGGTAATTTGTACATTTA+TGG - chr5.3:17918479-17918498 MS.gene69634:CDS 20.0%
!!! TATTAAATTTTCCAACACTT+CGG + chr5.3:17920850-17920869 None:intergenic 20.0%
!!! TCACACTATTCTTTTTTTAT+TGG - chr5.3:17917878-17917897 MS.gene69634:intron 20.0%
!!! TGTCTTAGCATTTAAAATAT+TGG - chr5.3:17920618-17920637 MS.gene69634:CDS 20.0%
! AACGAAATATAAGCAAAAGT+TGG + chr5.3:17921497-17921516 None:intergenic 25.0%
! AATCATTTAGGCTCATTATA+TGG - chr5.3:17916894-17916913 MS.gene69634:CDS 25.0%
! AATTAAATGATGAATCGTTC+GGG - chr5.3:17918549-17918568 MS.gene69634:CDS 25.0%
! ACTGTAATTAAATAGATTGG+TGG + chr5.3:17921606-17921625 None:intergenic 25.0%
! ACTTATATTTCGTAACAGAA+GGG + chr5.3:17921427-17921446 None:intergenic 25.0%
! ACTTCAATATAACAAGTTGT+TGG + chr5.3:17916555-17916574 None:intergenic 25.0%
! ATCAAACTCTTGAATGTTAA+TGG - chr5.3:17917011-17917030 MS.gene69634:CDS 25.0%
! ATTAGTAATTATGTTGTAGG+AGG + chr5.3:17920569-17920588 None:intergenic 25.0%
! ATTATCGACATGATCTTAAA+GGG - chr5.3:17922116-17922135 MS.gene69634:CDS 25.0%
! CAAAGAATAAAGAATTGTTC+TGG - chr5.3:17917058-17917077 MS.gene69634:intron 25.0%
! CAATATGTATTTCAGAGTAT+TGG + chr5.3:17917919-17917938 None:intergenic 25.0%
! CAATTCGAATTAAGCATATA+AGG + chr5.3:17920711-17920730 None:intergenic 25.0%
! CAGAACAATTCTTTATTCTT+TGG + chr5.3:17917060-17917079 None:intergenic 25.0%
! CTTTCAATGAATATCTCATA+AGG + chr5.3:17921738-17921757 None:intergenic 25.0%
! GATATTACAAGAACGATAAT+CGG + chr5.3:17922197-17922216 None:intergenic 25.0%
! GTGTTTCAACAACATTTATT+AGG + chr5.3:17921352-17921371 None:intergenic 25.0%
! TAAAGCAAAACTAAATCCAA+GGG - chr5.3:17919094-17919113 MS.gene69634:intron 25.0%
! TAACGAAAGTTTGATGTATT+TGG + chr5.3:17921473-17921492 None:intergenic 25.0%
! TAAGTTATTTAAAAAGGACG+TGG - chr5.3:17918510-17918529 MS.gene69634:CDS 25.0%
! TACACACATTATGAAGTTAT+AGG - chr5.3:17920806-17920825 MS.gene69634:intron 25.0%
! TACCATTAATATCTAGGTAA+TGG + chr5.3:17919799-17919818 None:intergenic 25.0%
! TACTTATATTTCGTAACAGA+AGG + chr5.3:17921428-17921447 None:intergenic 25.0%
! TATACCAATGAAAATCAAGA+CGG + chr5.3:17921979-17921998 None:intergenic 25.0%
! TCATGTAGGTAATAAAAAAC+AGG + chr5.3:17919518-17919537 None:intergenic 25.0%
! TGATAATAACGAATTGATGA+TGG - chr5.3:17918145-17918164 MS.gene69634:intron 25.0%
! TGTCTGACTCAAATATTAAA+AGG - chr5.3:17916528-17916547 MS.gene69634:intron 25.0%
! TTAAAGCAAAACTAAATCCA+AGG - chr5.3:17919093-17919112 MS.gene69634:intron 25.0%
! TTAACTTTATATTGCACATC+TGG - chr5.3:17916584-17916603 MS.gene69634:intron 25.0%
! TTAGTAATTATGTTGTAGGA+GGG + chr5.3:17920568-17920587 None:intergenic 25.0%
! TTCAAATGGAGAAAGATAAA+TGG + chr5.3:17919161-17919180 None:intergenic 25.0%
! TTCCATTACCTAGATATTAA+TGG - chr5.3:17919794-17919813 MS.gene69634:intron 25.0%
! TTTACGTACCATTAATATCT+AGG + chr5.3:17919805-17919824 None:intergenic 25.0%
!! AACTTGTGTCATAAAAGTAT+CGG + chr5.3:17919488-17919507 None:intergenic 25.0%
!! AGCTGTAAGAATATTTTATG+TGG - chr5.3:17916633-17916652 MS.gene69634:CDS 25.0%
!! ATTTTAAATGATCATCGTCA+TGG + chr5.3:17918712-17918731 None:intergenic 25.0%
!! CATTTTACAAAACATGGTAT+AGG - chr5.3:17921282-17921301 MS.gene69634:intron 25.0%
!! CTATACCATGTTTTGTAAAA+TGG + chr5.3:17921284-17921303 None:intergenic 25.0%
!! CTCTTTGATTTAAAACATGT+GGG - chr5.3:17918074-17918093 MS.gene69634:intron 25.0%
!! GGAACTTTTAAATCAGTTTA+TGG + chr5.3:17916958-17916977 None:intergenic 25.0%
!! TCTCTTTGATTTAAAACATG+TGG - chr5.3:17918073-17918092 MS.gene69634:intron 25.0%
!! TGGTATCAATATTTCTCTTT+TGG - chr5.3:17919591-17919610 MS.gene69634:intron 25.0%
!!! AAATATTGGTGATGAATTAG+GGG - chr5.3:17919900-17919919 MS.gene69634:intron 25.0%
!!! ATTCTTTTTTTATTGGTACC+AGG - chr5.3:17917885-17917904 MS.gene69634:intron 25.0%
!!! ATTTTAGAGTACTGAACATA+TGG + chr5.3:17921374-17921393 None:intergenic 25.0%
!!! CAAATATTGGTGATGAATTA+GGG - chr5.3:17919899-17919918 MS.gene69634:intron 25.0%
!!! CTCTATTGTTTTAGTTTTCA+TGG - chr5.3:17915921-17915940 MS.gene69634:CDS 25.0%
!!! TATATTGATAATGATTGCTC+GGG + chr5.3:17917668-17917687 None:intergenic 25.0%
!!! TCAAATATTGGTGATGAATT+AGG - chr5.3:17919898-17919917 MS.gene69634:intron 25.0%
!!! TCATAAAAGTATCGGTTAAA+AGG + chr5.3:17919480-17919499 None:intergenic 25.0%
!!! TCTTATAAAAAAGTACCGAA+AGG - chr5.3:17918876-17918895 MS.gene69634:intron 25.0%
!!! TTCTTTTTTCAAAGAAACGA+GGG + chr5.3:17920001-17920020 None:intergenic 25.0%
AAATGCAAAGAGAGTTTCAA+TGG - chr5.3:17921182-17921201 MS.gene69634:intron 30.0%
AAGAGAGTTTCAATGGTTTA+AGG - chr5.3:17921189-17921208 MS.gene69634:intron 30.0%
AATAGATTGGTGGAATTATG+TGG + chr5.3:17921596-17921615 None:intergenic 30.0%
AATTACACTCCAACAGTATT+AGG - chr5.3:17921391-17921410 MS.gene69634:intron 30.0%
AGTATGATATTGCCGAAATT+GGG - chr5.3:17919258-17919277 MS.gene69634:intron 30.0%
ATCCTTACCTGATAAATTCT+CGG - chr5.3:17917766-17917785 MS.gene69634:intron 30.0%
ATCTACATATACTCTCCTTT+CGG + chr5.3:17918894-17918913 None:intergenic 30.0%
ATGTTGAAACACATGATTCT+TGG + chr5.3:17921549-17921568 None:intergenic 30.0%
ATGTTGTCATGTAAGAAGAT+GGG + chr5.3:17921903-17921922 None:intergenic 30.0%
ATTCAAAAAACGTGTTAGCA+TGG - chr5.3:17920163-17920182 MS.gene69634:CDS 30.0%
ATTGGATTTGTCAAACACTT+TGG + chr5.3:17917457-17917476 None:intergenic 30.0%
CATATCATTCAACTATCATG+TGG - chr5.3:17916819-17916838 MS.gene69634:CDS 30.0%
CATATGAAAATATGCCTCTA+TGG + chr5.3:17920997-17921016 None:intergenic 30.0%
CATTATCGACATGATCTTAA+AGG - chr5.3:17922115-17922134 MS.gene69634:CDS 30.0%
CATTTGTTTATTGAACGGAT+GGG + chr5.3:17922266-17922285 None:intergenic 30.0%
CTCGAATGTATATATGACAT+CGG - chr5.3:17917122-17917141 MS.gene69634:intron 30.0%
CTTATATTTCGTAACAGAAG+GGG + chr5.3:17921426-17921445 None:intergenic 30.0%
CTTGAAACAGTCAAAAAATC+AGG - chr5.3:17915761-17915780 MS.gene69634:CDS 30.0%
GAGGGATTATGTTTCAAATA+TGG + chr5.3:17920550-17920569 None:intergenic 30.0%
GCAACATCTTATACAATTGT+AGG - chr5.3:17921804-17921823 MS.gene69634:intron 30.0%
GTTATGCAAAACTATCTTCA+GGG - chr5.3:17915614-17915633 MS.gene69634:CDS 30.0%
TAACATTCAAGAGTTTGATG+AGG + chr5.3:17917010-17917029 None:intergenic 30.0%
TAATATTTGAGTCAGACACA+AGG + chr5.3:17916526-17916545 None:intergenic 30.0%
TACTACAATGAACCACTTAT+GGG + chr5.3:17922150-17922169 None:intergenic 30.0%
TAGAACAAACAGAGAGAAAA+AGG + chr5.3:17922073-17922092 None:intergenic 30.0%
TATCGTTCTTGTAATATCAC+AGG - chr5.3:17922199-17922218 MS.gene69634:CDS 30.0%
TATGTTGTCATGTAAGAAGA+TGG + chr5.3:17921904-17921923 None:intergenic 30.0%
TCATGATGTGATTTATGAGT+CGG + chr5.3:17920195-17920214 None:intergenic 30.0%
TCATTTGTTTATTGAACGGA+TGG + chr5.3:17922267-17922286 None:intergenic 30.0%
TGATGCATCATGGAAAATAA+AGG - chr5.3:17916782-17916801 MS.gene69634:CDS 30.0%
TGATTCCTGACATAATTGAA+GGG + chr5.3:17920766-17920785 None:intergenic 30.0%
TGTATCACTGCTGAAATATT+TGG - chr5.3:17917507-17917526 MS.gene69634:intron 30.0%
TGTTATGCAAAACTATCTTC+AGG - chr5.3:17915613-17915632 MS.gene69634:CDS 30.0%
TTACTTTGTAAGATATTCCG+TGG - chr5.3:17919746-17919765 MS.gene69634:intron 30.0%
TTATGCAAAACTATCTTCAG+GGG - chr5.3:17915615-17915634 MS.gene69634:CDS 30.0%
TTCCCTCACATTTCAAATAT+TGG - chr5.3:17919886-17919905 MS.gene69634:intron 30.0%
TTCCCTCTATGAATATGTTA+GGG - chr5.3:17916715-17916734 MS.gene69634:CDS 30.0%
TTTCCCTCTATGAATATGTT+AGG - chr5.3:17916714-17916733 MS.gene69634:CDS 30.0%
TTTGTCAAACACTTTGGATT+TGG + chr5.3:17917451-17917470 None:intergenic 30.0%
! AATTTGAAACTGATGCATCA+TGG - chr5.3:17916772-17916791 MS.gene69634:CDS 30.0%
! ACATGTTTTCCTACTGATAT+AGG + chr5.3:17920385-17920404 None:intergenic 30.0%
! AGTTTTACATCCCAAGTTTA+AGG - chr5.3:17921686-17921705 MS.gene69634:intron 30.0%
! ATTCTTTATTCTTTGGAGAG+TGG + chr5.3:17917053-17917072 None:intergenic 30.0%
! CACCAATATTTGAAATGTGA+GGG + chr5.3:17919891-17919910 None:intergenic 30.0%
! CACTAATGTTGATAAAGAAC+TGG + chr5.3:17918738-17918757 None:intergenic 30.0%
! CTTCTTACCATCATCATTTT+CGG + chr5.3:17921715-17921734 None:intergenic 30.0%
! CTTTTATAAAAAGAACCGGA+AGG + chr5.3:17918778-17918797 None:intergenic 30.0%
! GAATAAAGAATTGTTCTGGA+AGG - chr5.3:17917062-17917081 MS.gene69634:intron 30.0%
! TCACCAATATTTGAAATGTG+AGG + chr5.3:17919892-17919911 None:intergenic 30.0%
! TCCTCGTTGTTACATTTTAA+GGG - chr5.3:17916607-17916626 MS.gene69634:intron 30.0%
!! CTTTAAGATCATGTCGATAA+TGG + chr5.3:17922117-17922136 None:intergenic 30.0%
!! TTTCAAATTCTGAAACAGTC+TGG + chr5.3:17916761-17916780 None:intergenic 30.0%
!!! GGATTTAGTTTTGCTTTAAG+TGG + chr5.3:17919092-17919111 None:intergenic 30.0%
!!! GTTCTTTTTTCAAAGAAACG+AGG + chr5.3:17920002-17920021 None:intergenic 30.0%
!!! TCTTTTTTCAAAGAAACGAG+GGG + chr5.3:17920000-17920019 None:intergenic 30.0%
AAACAGTCAAAAAATCAGGC+TGG - chr5.3:17915765-17915784 MS.gene69634:CDS 35.0%
AATGATTCCCTTAACAACGT+AGG + chr5.3:17917704-17917723 None:intergenic 35.0%
ACAGAAACGACATGAGTATA+CGG + chr5.3:17915857-17915876 None:intergenic 35.0%
ACCCTTAAAATGTAACAACG+AGG + chr5.3:17916611-17916630 None:intergenic 35.0%
AGACCAAACAATAACTTCCA+AGG + chr5.3:17922044-17922063 None:intergenic 35.0%
AGAGAAAAAACATAGCGTAC+CGG + chr5.3:17919408-17919427 None:intergenic 35.0%
AGTGAAAGATGGAGAGAAAT+GGG - chr5.3:17921770-17921789 MS.gene69634:intron 35.0%
ATGATTCCCTTAACAACGTA+GGG + chr5.3:17917703-17917722 None:intergenic 35.0%
ATGGCTCAAAGCTTTCATTT+AGG - chr5.3:17919548-17919567 MS.gene69634:intron 35.0%
ATTTATCAGGTAAGGATTGC+TGG + chr5.3:17917763-17917782 None:intergenic 35.0%
CAAAACTCGATTCTGTGAAT+TGG + chr5.3:17917475-17917494 None:intergenic 35.0%
CAACTCATACATTCTGTCAA+TGG - chr5.3:17921046-17921065 MS.gene69634:CDS 35.0%
CAATTACTGAGATTATGGGT+GGG - chr5.3:17918364-17918383 MS.gene69634:intron 35.0%
CAATTCTTTGTGTCCATTAG+CGG + chr5.3:17917400-17917419 None:intergenic 35.0%
CATATTCACTGCATTTCTCA+TGG - chr5.3:17921920-17921939 MS.gene69634:intron 35.0%
CCAAAGACAACTATGAAAGA+TGG - chr5.3:17915585-17915604 MS.gene69634:CDS 35.0%
CCATCTTTCATAGTTGTCTT+TGG + chr5.3:17915588-17915607 None:intergenic 35.0%
CTCAAAGCTTTCATTTAGGT+TGG - chr5.3:17919552-17919571 MS.gene69634:intron 35.0%
CTGATTCCTGACATAATTGA+AGG + chr5.3:17920767-17920786 None:intergenic 35.0%
CTTCAATTATGTCAGGAATC+AGG - chr5.3:17920765-17920784 MS.gene69634:intron 35.0%
GAGTATGATATTGCCGAAAT+TGG - chr5.3:17919257-17919276 MS.gene69634:intron 35.0%
GATATTCATTGAAAGCCATG+AGG - chr5.3:17921743-17921762 MS.gene69634:intron 35.0%
GGTGCAATTACTGAGATTAT+GGG - chr5.3:17918360-17918379 MS.gene69634:intron 35.0%
GTACTACAATGAACCACTTA+TGG + chr5.3:17922151-17922170 None:intergenic 35.0%
GTTCATTGTAGTACCAATCA+TGG - chr5.3:17922157-17922176 MS.gene69634:CDS 35.0%
GTTGTTCGAATAATGCTTTC+CGG - chr5.3:17919386-17919405 MS.gene69634:intron 35.0%
TAAAACATGTGGGTTCAATG+TGG - chr5.3:17918084-17918103 MS.gene69634:intron 35.0%
TAACAACTCCAAGACTGATT+AGG - chr5.3:17920739-17920758 MS.gene69634:CDS 35.0%
TAATAGTTCCAAGCTCAAAG+AGG - chr5.3:17920865-17920884 MS.gene69634:intron 35.0%
TAATGAGCCTAAATGATTCC+AGG + chr5.3:17916892-17916911 None:intergenic 35.0%
TAGTGAAAGATGGAGAGAAA+TGG - chr5.3:17921769-17921788 MS.gene69634:intron 35.0%
TATGGCAAAGATTTAACAGC+CGG - chr5.3:17916912-17916931 MS.gene69634:CDS 35.0%
TCATACATTCTGTCAATGGA+CGG - chr5.3:17921050-17921069 MS.gene69634:CDS 35.0%
TCCATACCGATATTTCCAAT+AGG + chr5.3:17917102-17917121 None:intergenic 35.0%
TCTATGAATATGTTAGGGCA+AGG - chr5.3:17916720-17916739 MS.gene69634:CDS 35.0%
TGATAGATTCACAATGTGCT+CGG + chr5.3:17916103-17916122 None:intergenic 35.0%
TGCATGGTAGAGGAAATAAA+GGG - chr5.3:17917312-17917331 MS.gene69634:intron 35.0%
TGCCCTAACATATTCATAGA+GGG + chr5.3:17916720-17916739 None:intergenic 35.0%
TGGTGCAATTACTGAGATTA+TGG - chr5.3:17918359-17918378 MS.gene69634:intron 35.0%
TGTGGAAAATGTGGAATTGT+TGG - chr5.3:17917188-17917207 MS.gene69634:intron 35.0%
TGTTTCGTACCTAATACTGT+TGG + chr5.3:17921403-17921422 None:intergenic 35.0%
TTGAATGTTAATGGCAGATG+TGG - chr5.3:17917020-17917039 MS.gene69634:CDS 35.0%
TTGATGAACTATTCCATCAG+AGG + chr5.3:17915558-17915577 None:intergenic 35.0%
TTGCCCTAACATATTCATAG+AGG + chr5.3:17916721-17916740 None:intergenic 35.0%
TTGCCTTGGAAGTTATTGTT+TGG - chr5.3:17922038-17922057 MS.gene69634:CDS 35.0%
TTGTTAATCCTTTAGATCCC+AGG + chr5.3:17918650-17918669 None:intergenic 35.0%
! AAACACTTTGGATTTGGTAG+GGG + chr5.3:17917445-17917464 None:intergenic 35.0%
! AACCAAACTACCGATTACTA+GGG - chr5.3:17918613-17918632 MS.gene69634:intron 35.0%
! ACTTCCGTCTTGATTTTCAT+TGG - chr5.3:17921972-17921991 MS.gene69634:intron 35.0%
! AGTTGGCAAAATTTGGAACA+AGG - chr5.3:17920091-17920110 MS.gene69634:CDS 35.0%
! ATTTTCGGCTTCCTTAAACT+TGG + chr5.3:17921700-17921719 None:intergenic 35.0%
! CAAACACTTTGGATTTGGTA+GGG + chr5.3:17917446-17917465 None:intergenic 35.0%
! CAGTACGATTATCAGCATTT+TGG + chr5.3:17915664-17915683 None:intergenic 35.0%
! CATTTTTGCCAATGCAACTA+AGG + chr5.3:17917792-17917811 None:intergenic 35.0%
! GTCCTCGTTGTTACATTTTA+AGG - chr5.3:17916606-17916625 MS.gene69634:intron 35.0%
! GTTGGCAAAATTTGGAACAA+GGG - chr5.3:17920092-17920111 MS.gene69634:CDS 35.0%
! GTTGTGAGTTTTTACGGTTT+TGG - chr5.3:17918331-17918350 MS.gene69634:intron 35.0%
! TCAAACACTTTGGATTTGGT+AGG + chr5.3:17917447-17917466 None:intergenic 35.0%
! TGGAATTGTTGGTGAAAGTA+GGG - chr5.3:17917199-17917218 MS.gene69634:intron 35.0%
! TTGGTGGAATTATGTGGTTT+TGG + chr5.3:17921590-17921609 None:intergenic 35.0%
! TTTTCGGCTTCCTTAAACTT+GGG + chr5.3:17921699-17921718 None:intergenic 35.0%
! TTTTGGCCAGTAAAGCTTTT+GGG - chr5.3:17919608-17919627 MS.gene69634:intron 35.0%
!! AAGTATCGGTTAAAAGGCAT+AGG + chr5.3:17919474-17919493 None:intergenic 35.0%
!! GTTGGCCATTTTACAAAACA+TGG - chr5.3:17921276-17921295 MS.gene69634:intron 35.0%
!! TACCATGCACTTTGCTATTT+CGG + chr5.3:17917301-17917320 None:intergenic 35.0%
!! TCAACGTATACTAGCTTTGT+TGG - chr5.3:17921258-17921277 MS.gene69634:intron 35.0%
!!! CTGATTTTGCTGATTTGTTC+AGG - chr5.3:17919719-17919738 MS.gene69634:intron 35.0%
!!! TCTGATTCTGAGATTTTGCT+AGG + chr5.3:17917734-17917753 None:intergenic 35.0%
!!! TTTTTACGGTTTTGGTGATG+TGG - chr5.3:17918339-17918358 MS.gene69634:intron 35.0%
AAAACTGTCTGCAACTCATG+CGG - chr5.3:17920356-17920375 MS.gene69634:CDS 40.0%
AAAAGAGTCCCCCTAGTAAT+CGG + chr5.3:17918626-17918645 None:intergenic 40.0%
AAAGATAAATGGTGCGAGAG+AGG + chr5.3:17919150-17919169 None:intergenic 40.0%
AAGGAAGCCGAAAATGATGA+TGG - chr5.3:17921705-17921724 MS.gene69634:intron 40.0%
AATAGCAAAGTGCATGGTAG+AGG - chr5.3:17917302-17917321 MS.gene69634:intron 40.0%
ACAGCGAAGTTGGCAAAATT+TGG - chr5.3:17920084-17920103 MS.gene69634:CDS 40.0%
ACTAAGGCCGAGAATTTATC+AGG + chr5.3:17917776-17917795 None:intergenic 40.0%
AGAATTGCTATATGCTGCGA+AGG - chr5.3:17918993-17919012 MS.gene69634:intron 40.0%
AGACATCGTATAGACTCGTT+TGG - chr5.3:17921085-17921104 MS.gene69634:intron 40.0%
AGGGATATGAAACCCATAAG+TGG - chr5.3:17922135-17922154 MS.gene69634:CDS 40.0%
ATATGCATGCAAGACGAACA+CGG - chr5.3:17917234-17917253 MS.gene69634:intron 40.0%
ATGAAATCTTCCGCTCAACA+TGG - chr5.3:17922234-17922253 MS.gene69634:CDS 40.0%
ATGCGGAAACCTATATCAGT+AGG - chr5.3:17920373-17920392 MS.gene69634:CDS 40.0%
ATGTGAGATTGAGGTTCAAC+TGG - chr5.3:17918253-17918272 MS.gene69634:intron 40.0%
ATTAGGCTTAAGAGGGGATT+AGG - chr5.3:17918388-17918407 MS.gene69634:intron 40.0%
CAGCAACACATGTTACCTTT+CGG + chr5.3:17919292-17919311 None:intergenic 40.0%
CATGGAAAATCTCAGTGTTG+AGG + chr5.3:17918230-17918249 None:intergenic 40.0%
CCAACAAATATGCAACTCCA+CGG + chr5.3:17919766-17919785 None:intergenic 40.0%
CGAGTTCATAAATGCCATGA+GGG - chr5.3:17920934-17920953 MS.gene69634:CDS 40.0%
GAACTCGATTATTCCGTGTT+GGG + chr5.3:17920921-17920940 None:intergenic 40.0%
GACATACCCAAAAGCTTTAC+TGG + chr5.3:17919617-17919636 None:intergenic 40.0%
GCAATTACTGAGATTATGGG+TGG - chr5.3:17918363-17918382 MS.gene69634:intron 40.0%
GCCTATTGGAAATATCGGTA+TGG - chr5.3:17917098-17917117 MS.gene69634:intron 40.0%
GGTACGCCTATTGGAAATAT+CGG - chr5.3:17917093-17917112 MS.gene69634:intron 40.0%
GTGCATGGTAGAGGAAATAA+AGG - chr5.3:17917311-17917330 MS.gene69634:intron 40.0%
GTTGTTTATGATACCACTGC+AGG - chr5.3:17921653-17921672 MS.gene69634:intron 40.0%
GTTTGATCCATGATCAGATG+TGG - chr5.3:17917610-17917629 MS.gene69634:intron 40.0%
TACCGAAATAGCAAAGTGCA+TGG - chr5.3:17917296-17917315 MS.gene69634:intron 40.0%
TAGGTCCCTTCAATTATGTC+AGG - chr5.3:17920758-17920777 MS.gene69634:CDS 40.0%
TAGTACCAATCATGGCACTT+GGG - chr5.3:17922165-17922184 MS.gene69634:CDS 40.0%
TCGACGGCTGAAAGAAAATT+AGG + chr5.3:17920968-17920987 None:intergenic 40.0%
TCGAGTTCATAAATGCCATG+AGG - chr5.3:17920933-17920952 MS.gene69634:CDS 40.0%
TGAACTCGATTATTCCGTGT+TGG + chr5.3:17920922-17920941 None:intergenic 40.0%
TGAGATTATGGGTGGGAATT+AGG - chr5.3:17918371-17918390 MS.gene69634:intron 40.0%
TGCTGGAAATGTGGAAAATG+TGG - chr5.3:17917179-17917198 MS.gene69634:intron 40.0%
TTAGGCTTAAGAGGGGATTA+GGG - chr5.3:17918389-17918408 MS.gene69634:intron 40.0%
TTGGCCTAGAAATCCCAATT+GGG + chr5.3:17917837-17917856 None:intergenic 40.0%
TTGTCCATCCTTCATCTTCT+TGG + chr5.3:17915696-17915715 None:intergenic 40.0%
TTTCATTGCAGATTTGAGCG+TGG - chr5.3:17919217-17919236 MS.gene69634:intron 40.0%
TTTGGCCTAGAAATCCCAAT+TGG + chr5.3:17917838-17917857 None:intergenic 40.0%
! ACCAAACTACCGATTACTAG+GGG - chr5.3:17918614-17918633 MS.gene69634:intron 40.0%
! ACTGCGGAAGAAATCTTTTG+TGG + chr5.3:17919332-17919351 None:intergenic 40.0%
! ATGCCTACATCTTTTCCAAG+TGG - chr5.3:17917809-17917828 MS.gene69634:intron 40.0%
! CAACCAAACTACCGATTACT+AGG - chr5.3:17918612-17918631 MS.gene69634:intron 40.0%
! CTCTTGAATCTGGGTCATTT+TGG + chr5.3:17915805-17915824 None:intergenic 40.0%
! CTCTTTTTCCTGGGATCTAA+AGG - chr5.3:17918639-17918658 MS.gene69634:intron 40.0%
! CTTTTGGCCAGTAAAGCTTT+TGG - chr5.3:17919607-17919626 MS.gene69634:intron 40.0%
! GGGAGAAGAAGTTGGATTTT+TGG - chr5.3:17918569-17918588 MS.gene69634:CDS 40.0%
! GTGGAATTGTTGGTGAAAGT+AGG - chr5.3:17917198-17917217 MS.gene69634:intron 40.0%
! TAAATGATTCCAGGCGCTTT+TGG + chr5.3:17916883-17916902 None:intergenic 40.0%
! TGCTGATAATCGTACTGATC+AGG - chr5.3:17915667-17915686 MS.gene69634:CDS 40.0%
! TGGGATTTTTCCATGTTGAG+CGG + chr5.3:17922247-17922266 None:intergenic 40.0%
!! AAAAGCGCCTGGAATCATTT+AGG - chr5.3:17916882-17916901 MS.gene69634:CDS 40.0%
!! CCTTTTCTAGCAACGTTTCT+GGG + chr5.3:17917341-17917360 None:intergenic 40.0%
!! TATATATGACATCGGCTTCC+AGG - chr5.3:17917130-17917149 MS.gene69634:intron 40.0%
!! TCCTTTTCTAGCAACGTTTC+TGG + chr5.3:17917342-17917361 None:intergenic 40.0%
!! TCGATTTGTTGACTGGTGTA+TGG + chr5.3:17920507-17920526 None:intergenic 40.0%
!! TGAATCTGGGTCATTTTGGT+TGG + chr5.3:17915801-17915820 None:intergenic 40.0%
!! TTTGGATTTGGTAGGGGTTT+TGG + chr5.3:17917439-17917458 None:intergenic 40.0%
!!! AAGCGGGTTGTGAGTTTTTA+CGG - chr5.3:17918325-17918344 MS.gene69634:intron 40.0%
!!! AGGGGTTTTGGAGTAAAGAT+AGG + chr5.3:17917427-17917446 None:intergenic 40.0%
AAAGGCTGCAGCAAACATGA+TGG + chr5.3:17921844-17921863 None:intergenic 45.0%
AATCGTTCGGGAGAAGAAGT+TGG - chr5.3:17918561-17918580 MS.gene69634:CDS 45.0%
AATTGGGAACTTCGTCCGAA+AGG - chr5.3:17919274-17919293 MS.gene69634:intron 45.0%
ACATTCTGTCAATGGACGGA+AGG - chr5.3:17921054-17921073 MS.gene69634:CDS 45.0%
ACCTCAATCTCACATGCTCA+TGG + chr5.3:17918248-17918267 None:intergenic 45.0%
ACCTGGATACGACAAAACGT+GGG - chr5.3:17919028-17919047 MS.gene69634:intron 45.0%
ACCTTGTTCATGATCTGCAC+CGG + chr5.3:17916934-17916953 None:intergenic 45.0%
ACTTTCTCAAGAGCTTGCCT+TGG - chr5.3:17922024-17922043 MS.gene69634:CDS 45.0%
AGCAGTGATTGCTGGAAATG+TGG - chr5.3:17917170-17917189 MS.gene69634:intron 45.0%
AGTTACTTCTGCCGAAGTGT+TGG - chr5.3:17920836-17920855 MS.gene69634:intron 45.0%
ATACTCCCAAGTGCCATGAT+TGG + chr5.3:17922173-17922192 None:intergenic 45.0%
ATGTTGCATGCATCCCAACA+CGG - chr5.3:17920905-17920924 MS.gene69634:CDS 45.0%
ATTCTCGGCCTTAGTTGCAT+TGG - chr5.3:17917781-17917800 MS.gene69634:intron 45.0%
ATTTCTTCCGCAGTCCAATG+TGG - chr5.3:17919338-17919357 MS.gene69634:intron 45.0%
CAAAACTATCTTCAGGGGCA+AGG - chr5.3:17915620-17915639 MS.gene69634:CDS 45.0%
CATCTTTCACTAGCTCCTCA+TGG + chr5.3:17921761-17921780 None:intergenic 45.0%
CATGAGGAGCTAGTGAAAGA+TGG - chr5.3:17921759-17921778 MS.gene69634:intron 45.0%
CCCAGAAACGTTGCTAGAAA+AGG - chr5.3:17917338-17917357 MS.gene69634:intron 45.0%
CCGTGGAGTTGCATATTTGT+TGG - chr5.3:17919763-17919782 MS.gene69634:intron 45.0%
CTCAAAGCCACATCTGATCA+TGG + chr5.3:17917620-17917639 None:intergenic 45.0%
CTGCTATGACGATCAGATGA+AGG + chr5.3:17921145-17921164 None:intergenic 45.0%
GCAAAACTAAATCCAAGGGC+TGG - chr5.3:17919098-17919117 MS.gene69634:intron 45.0%
GCTTCCAAGAAGATGAAGGA+TGG - chr5.3:17915689-17915708 MS.gene69634:CDS 45.0%
GGCCGAGAATTTATCAGGTA+AGG + chr5.3:17917771-17917790 None:intergenic 45.0%
GGTGGGAATTAGGCTTAAGA+GGG - chr5.3:17918381-17918400 MS.gene69634:intron 45.0%
GTAGTACCAATCATGGCACT+TGG - chr5.3:17922164-17922183 MS.gene69634:CDS 45.0%
GTGGGAATTAGGCTTAAGAG+GGG - chr5.3:17918382-17918401 MS.gene69634:intron 45.0%
GTTTATGATACCACTGCAGG+CGG - chr5.3:17921656-17921675 MS.gene69634:intron 45.0%
GTTTCCACCTGGAACTGTAA+AGG + chr5.3:17921862-17921881 None:intergenic 45.0%
TAGCGGCAGCTAGAAGAATA+GGG + chr5.3:17917383-17917402 None:intergenic 45.0%
TCAGGCTTCCAAGAAGATGA+AGG - chr5.3:17915685-17915704 MS.gene69634:CDS 45.0%
TCCATGAGCATGTGAGATTG+AGG - chr5.3:17918244-17918263 MS.gene69634:intron 45.0%
TCGGACGAAGTTCCCAATTT+CGG + chr5.3:17919273-17919292 None:intergenic 45.0%
TCTGATCGTCATAGCAGATC+CGG - chr5.3:17921148-17921167 MS.gene69634:intron 45.0%
TGAAGGGACCTAATCAGTCT+TGG + chr5.3:17920750-17920769 None:intergenic 45.0%
TTAGCGGCAGCTAGAAGAAT+AGG + chr5.3:17917384-17917403 None:intergenic 45.0%
TTCCCTTAACAACGTAGGGA+CGG + chr5.3:17917699-17917718 None:intergenic 45.0%
TTGCAGATTTGAGCGTGGAA+AGG - chr5.3:17919222-17919241 MS.gene69634:intron 45.0%
TTTCCAAGTGGCACCCAATT+GGG - chr5.3:17917821-17917840 MS.gene69634:intron 45.0%
TTTGCCAACTTCGCTGTTAG+TGG + chr5.3:17920081-17920100 None:intergenic 45.0%
! ATTAGGATTAGCGTCCCTCA+TGG + chr5.3:17920951-17920970 None:intergenic 45.0%
! ATTCTTCTAGCTGCCGCTAA+TGG - chr5.3:17917384-17917403 MS.gene69634:intron 45.0%
! CCAAACTACCGATTACTAGG+GGG - chr5.3:17918615-17918634 MS.gene69634:intron 45.0%
! TGAGTTGCAGACAGTTTTGC+AGG + chr5.3:17920354-17920373 None:intergenic 45.0%
! TTGCAGACAGTTTTGCAGGT+TGG + chr5.3:17920350-17920369 None:intergenic 45.0%
! TTTTCCAAGTGGCACCCAAT+TGG - chr5.3:17917820-17917839 MS.gene69634:intron 45.0%
!! AGAGTATTGGAATGCTTGCC+TGG + chr5.3:17917906-17917925 None:intergenic 45.0%
!! GGTTCGATCGATTTGTTGAC+TGG + chr5.3:17920514-17920533 None:intergenic 45.0%
!! GTGCCACTTGGAAAAGATGT+AGG + chr5.3:17917815-17917834 None:intergenic 45.0%
!! TGGCAATAACTTGTTGCACC+TGG - chr5.3:17921105-17921124 MS.gene69634:intron 45.0%
!! TTAAAACAGCCAAAAGCGCC+TGG - chr5.3:17916871-17916890 MS.gene69634:CDS 45.0%
!! TTGGTGATGAATTAGGGGAG+CGG - chr5.3:17919905-17919924 MS.gene69634:intron 45.0%
!! TTGTTCTGGAAGGTGATGAG+AGG - chr5.3:17917072-17917091 MS.gene69634:intron 45.0%
!! TATTAATAAGTTATTTAAAA+AGG - chr5.3:17918504-17918523 MS.gene69634:CDS 5.0%
AAGGACCTAAATGTGCTGCC+AGG + chr5.3:17921126-17921145 None:intergenic 50.0%
ACCGACCTTGCTCCAAATCT+GGG + chr5.3:17915832-17915851 None:intergenic 50.0%
ATCTTCAGGGGCAAGGTCTA+TGG - chr5.3:17915627-17915646 MS.gene69634:CDS 50.0%
ATGTTAGGGCAAGGCCTTCT+AGG - chr5.3:17916729-17916748 MS.gene69634:CDS 50.0%
CAGTCTGGATAACGCCTAGA+AGG + chr5.3:17916746-17916765 None:intergenic 50.0%
CATGCCACTAACAGCGAAGT+TGG - chr5.3:17920074-17920093 MS.gene69634:CDS 50.0%
CCAATGTGGCATAGGCAGAA+AGG - chr5.3:17919352-17919371 MS.gene69634:intron 50.0%
CCCCCTAGTAATCGGTAGTT+TGG + chr5.3:17918618-17918637 None:intergenic 50.0%
CCTTTCTGCCTATGCCACAT+TGG + chr5.3:17919355-17919374 None:intergenic 50.0%
CGAGTAACAGTATCGCAGTG+AGG + chr5.3:17915897-17915916 None:intergenic 50.0%
CTCCGTCCCTACGTTGTTAA+GGG - chr5.3:17917694-17917713 MS.gene69634:intron 50.0%
GAAGGAAATGATGCACGACC+TGG - chr5.3:17919011-17919030 MS.gene69634:intron 50.0%
GACCTGGATACGACAAAACG+TGG - chr5.3:17919027-17919046 MS.gene69634:intron 50.0%
GGCACCCAATTGGGATTTCT+AGG - chr5.3:17917830-17917849 MS.gene69634:intron 50.0%
GGGTGGGAATTAGGCTTAAG+AGG - chr5.3:17918380-17918399 MS.gene69634:intron 50.0%
GGTGGAAACGACGACAAAAC+TGG - chr5.3:17921873-17921892 MS.gene69634:intron 50.0%
TACCGACCTTGCTCCAAATC+TGG + chr5.3:17915833-17915852 None:intergenic 50.0%
TCAGGTAAGGATTGCTGGAG+AGG + chr5.3:17917758-17917777 None:intergenic 50.0%
TCTCCGTCCCTACGTTGTTA+AGG - chr5.3:17917693-17917712 MS.gene69634:intron 50.0%
TCTTCAGGGGCAAGGTCTAT+GGG - chr5.3:17915628-17915647 MS.gene69634:CDS 50.0%
TGCAGAAGCCTCTTTGAGCT+TGG + chr5.3:17920876-17920895 None:intergenic 50.0%
TTCAAGAGCTGCCCCAGATT+TGG - chr5.3:17915817-17915836 MS.gene69634:CDS 50.0%
TTGCACCTGGCAGCACATTT+AGG - chr5.3:17921118-17921137 MS.gene69634:intron 50.0%
TTGCATTTGCAGAGCAGCAC+CGG + chr5.3:17921170-17921189 None:intergenic 50.0%
! ACTAGGGGGACTCTTTTTCC+TGG - chr5.3:17918629-17918648 MS.gene69634:intron 50.0%
! CTAGGGGGACTCTTTTTCCT+GGG - chr5.3:17918630-17918649 MS.gene69634:intron 50.0%
! GCGCTTGTTGCACGTTATAC+TGG - chr5.3:17917270-17917289 MS.gene69634:intron 50.0%
! GTGATGAGAGGTACGCCTAT+TGG - chr5.3:17917084-17917103 MS.gene69634:intron 50.0%
! GTTTTGTCGTCGTTTCCACC+TGG + chr5.3:17921873-17921892 None:intergenic 50.0%
! TCAACAGGTGTTGCCTCTGA+TGG - chr5.3:17915542-17915561 MS.gene69634:CDS 50.0%
!! AATCCCAATTGGGTGCCACT+TGG + chr5.3:17917827-17917846 None:intergenic 50.0%
ACTTTCTCAACCGCCTGCAG+TGG + chr5.3:17921669-17921688 None:intergenic 55.0%
CCGACCTTGCTCCAAATCTG+GGG + chr5.3:17915831-17915850 None:intergenic 55.0%
CTGGGGCAGCTCTTGAATCT+GGG + chr5.3:17915814-17915833 None:intergenic 55.0%
CTTCACGCAGCAGTGATTGC+TGG - chr5.3:17917162-17917181 MS.gene69634:intron 55.0%
GCAGCCTTTACAGTTCCAGG+TGG - chr5.3:17921855-17921874 MS.gene69634:intron 55.0%
GCCGGTGCAGATCATGAACA+AGG - chr5.3:17916930-17916949 MS.gene69634:CDS 55.0%
GCCTATGCCACATTGGACTG+CGG + chr5.3:17919348-17919367 None:intergenic 55.0%
GCCTCTATGGCAGCTATCGA+CGG + chr5.3:17920984-17921003 None:intergenic 55.0%
GCTGCAGCCTTTACAGTTCC+AGG - chr5.3:17921852-17921871 MS.gene69634:intron 55.0%
GGCTGCAGCAAACATGATGG+TGG + chr5.3:17921841-17921860 None:intergenic 55.0%
TCCGCAGTCCAATGTGGCAT+AGG - chr5.3:17919344-17919363 MS.gene69634:intron 55.0%
TGCGTGAAGAAGCGAAGACC+TGG + chr5.3:17917151-17917170 None:intergenic 55.0%
TTGGCGCTTCTGCAAACTGC+TGG - chr5.3:17919571-17919590 MS.gene69634:intron 55.0%
! CCCCAGATTTGGAGCAAGGT+CGG - chr5.3:17915828-17915847 MS.gene69634:CDS 55.0%
! GCCCACGTTTTGTCGTATCC+AGG + chr5.3:17919032-17919051 None:intergenic 55.0%
! TCTGGGGCAGCTCTTGAATC+TGG + chr5.3:17915815-17915834 None:intergenic 55.0%
GACGAATGCACACCAGCCCT+TGG + chr5.3:17919113-17919132 None:intergenic 60.0%
GCCGTCGATAGCTGCCATAG+AGG - chr5.3:17920980-17920999 MS.gene69634:CDS 60.0%
! GCTGCCCCAGATTTGGAGCA+AGG - chr5.3:17915824-17915843 MS.gene69634:CDS 60.0%


Chromosome Type Strat End Strand Name
chr5.3 gene 17915533 17922286 17915533 ID=MS.gene69634
chr5.3 mRNA 17915533 17922286 17915533 ID=MS.gene69634.t1;Parent=MS.gene69634
chr5.3 exon 17921974 17922286 17921974 ID=MS.gene69634.t1.exon1;Parent=MS.gene69634.t1
chr5.3 CDS 17921974 17922286 17921974 ID=cds.MS.gene69634.t1;Parent=MS.gene69634.t1
chr5.3 exon 17920868 17921083 17920868 ID=MS.gene69634.t1.exon2;Parent=MS.gene69634.t1
chr5.3 CDS 17920868 17921083 17920868 ID=cds.MS.gene69634.t1;Parent=MS.gene69634.t1
chr5.3 exon 17920291 17920782 17920291 ID=MS.gene69634.t1.exon3;Parent=MS.gene69634.t1
chr5.3 CDS 17920291 17920782 17920291 ID=cds.MS.gene69634.t1;Parent=MS.gene69634.t1
chr5.3 exon 17919950 17920192 17919950 ID=MS.gene69634.t1.exon4;Parent=MS.gene69634.t1
chr5.3 CDS 17919950 17920192 17919950 ID=cds.MS.gene69634.t1;Parent=MS.gene69634.t1
chr5.3 exon 17918412 17918591 17918412 ID=MS.gene69634.t1.exon5;Parent=MS.gene69634.t1
chr5.3 CDS 17918412 17918591 17918412 ID=cds.MS.gene69634.t1;Parent=MS.gene69634.t1
chr5.3 exon 17918004 17918078 17918004 ID=MS.gene69634.t1.exon6;Parent=MS.gene69634.t1
chr5.3 CDS 17918004 17918078 17918004 ID=cds.MS.gene69634.t1;Parent=MS.gene69634.t1
chr5.3 exon 17916609 17917039 17916609 ID=MS.gene69634.t1.exon7;Parent=MS.gene69634.t1
chr5.3 CDS 17916609 17917039 17916609 ID=cds.MS.gene69634.t1;Parent=MS.gene69634.t1
chr5.3 exon 17915533 17916144 17915533 ID=MS.gene69634.t1.exon8;Parent=MS.gene69634.t1
chr5.3 CDS 17915533 17916144 17915533 ID=cds.MS.gene69634.t1;Parent=MS.gene69634.t1
Gene Sequence

>MS.gene69634

ATGATGAAATCAACAGGTGTTGCCTCTGATGGAATAGTTCATCAAGTACTCACCAAAGACAACTATGAAAGATGGAAAATTGTTATGCAAAACTATCTTCAGGGGCAAGGTCTATGGGACGTTGTCATCCAAAATGCTGATAATCGTACTGATCAGGCTTCCAAGAAGATGAAGGATGGACAACAAGCTTTACACTTCTTTCAACTATCATCATGTAAACGAGATTTTCTTGAAACAGTCAAAAAATCAGGCTGGAATAACTTCACCAACCAAAATGACCCAGATTCAAGAGCTGCCCCAGATTTGGAGCAAGGTCGGTATCCGTATACTCATGTCGTTTCTGTATTTTTGTAGAACAACTCCTCACTGCGATACTGTTACTCGCTTTCTCTATTGTTTTAGTTTTCATGGCAATATCTAAGTTTATTTGTATATATTTGATTGTTTCATAAGTTTTCTAAAAAATGATTGTTCAAATAACATATTCTATTTTTTTCAATAATGGTATCTAGACACACCCAATTTTTCTACATTCATTCAACAATTCATTTTCTCTATATCTCTCTTCCGAGCACATTGTGAATCTATCACATTCACTCTCTTTTATTCTTCTTACAATCAAAATTAAAATTATTTTTATTTTTTAAAAATATAATTATTATTAATAATAAATATACAATTTTTTTCTTTTGTCCTAACAATTTTTTATAATACTTGCAAATCCAACACATTTTACTTTTAGTTTTGTTGTTTTGATTTAGTCTCTACCAAATTTGTTTATGTTGCAATTGATCCATATAAATTACTATTAATCTTTATTTTGATGGATTAAAATCAAATTCTTTTCAAATTACATATATAAATCAATTTAATATAAATAAATTTGATAGAAACAACAAGGACGACTTACTTTTTTTAATCAAACCAAGGACTTTAACTTTTAATTAAGGACTTGCTTAAACAAGCCGCAACTTTTAAACTTATTTGAGTCCTTGTGTCTGACTCAAATATTAAAAGGACCAACAACTTGTTATATTGAAGTCGTGTTTAATTAACTTTATATTGCACATCTGGTCCTCGTTGTTACATTTTAAGGGTTTAGCTGTAAGAATATTTTATGTGGAATTACAAATTTAAACATTAATGTATATGTTTATGTTTCCCTCTAAATATTTTTGATATTTCCCTCTATGAATATGTTAGGGCAAGGCCTTCTAGGCGTTATCCAGACTGTTTCAGAATTTGAAACTGATGCATCATGGAAAATAAAGGACGTGAAAGCTTTGCATATCATTCAACTATCATGTGGACGAGAGATTGCTGATGAGATTAGTCATTTTAAAACAGCCAAAAGCGCCTGGAATCATTTAGGCTCATTATATGGCAAAGATTTAACAGCCGGTGCAGATCATGAACAAGGTACCATAAACTGATTTAAAAGTTCCATAAACTTAATTTTATGACAATTAATGTGCCTCATCAAACTCTTGAATGTTAATGGCAGATGTGGATGATAGCCACTCTCCAAAGAATAAAGAATTGTTCTGGAAGGTGATGAGAGGTACGCCTATTGGAAATATCGGTATGGACTCGAATGTATATATGACATCGGCTTCCAGGTCTTCGCTTCTTCACGCAGCAGTGATTGCTGGAAATGTGGAAAATGTGGAATTGTTGGTGAAAGTAGGGAAAGACAAGTTAATATGCATGCAAGACGAACACGGTGACACAGCTCTTGCGCTTGTTGCACGTTATACTGGAAATACCGAAATAGCAAAGTGCATGGTAGAGGAAATAAAGGGACTCCCAGAAACGTTGCTAGAAAAGGAGAACAATGACAATGTAATCCCTATTCTTCTAGCTGCCGCTAATGGACACAAAGAATTGACTTCCTATCTTTACTCCAAAACCCCTACCAAATCCAAAGTGTTTGACAAATCCAATTCACAGAATCGAGTTTTGCTTCTTTCACTATGTATCACTGCTGAAATATTTGGTAAGTAAATTTATAGTTTTTGTATGTTGTTAATTTCTTTTTGGTATTTTACTGTAATACTTTTTTTTATTCAAATGTGTGGTTTGATCCATGATCAGATGTGGCTTTGAGATTACTCAGACGTTTCAAAGATCTGCCCGAGCAATCATTATCAATATATAACTTCTCCGTCCCTACGTTGTTAAGGGAATCATTATCACTACCTAGCAAAATCTCAGAATCAGATCCTCTCCAGCAATCCTTACCTGATAAATTCTCGGCCTTAGTTGCATTGGCAAAAATGCCTACATCTTTTCCAAGTGGCACCCAATTGGGATTTCTAGGCCAAATTATTTATGAAAGTAAGTTTTCACACTATTCTTTTTTTATTGGTACCAGGCAAGCATTCCAATACTCTGAAATACATATTGTAAAAGAAAAATAGTTTAAATAAAGTTAGATGGTTAATACATATAACGACAACAACAAAACCCAATAGATACTATTCAGATTAAACTCAAGATAATATGTCATGTAATTGAGTTTGATTGTGTTGATAAACTTATCTCTTTGATTTAAAACATGTGGGTTCAATGTGGCTGCAATAGAAAAATACATAAAACCTAAGTTAGTAATATGATAATAACGAATTGATGATGGAGATTATGAAAGATGATAGAATAATAAGATACATGTCAAATATTGTAAAGCATGAGCGTCCTCAACACTGAGATTTTCCATGAGCATGTGAGATTGAGGTTCAACTGGTATGCAATGACGTCGCATAAAAATAATGAGCATCAATTAATATAAAAAGAAGCGGGTTGTGAGTTTTTACGGTTTTGGTGATGTGGTGCAATTACTGAGATTATGGGTGGGAATTAGGCTTAAGAGGGGATTAGGGTTGAGCATAATTTAAGAGACATTTATAATAATAGAATAGATAGATAAATATAATATGATACAATGGTTATGGTAATTTGTACATTTATGGCGTATTAATAAGTTATTTAAAAAGGACGTGGAACAAATATAAGAAAAAATTAAATGATGAATCGTTCGGGAGAAGAAGTTGGATTTTTGGATGAAACAATTAAAATCTCACAACCAAACTACCGATTACTAGGGGGACTCTTTTTCCTGGGATCTAAAGGATTAACAAAAATAAAAAAAAGATAAGTAAAGAGTTATGTTAGTATATCCATGACGATGATCATTTAAAATTTACCAGTTCTTTATCAACATTAGTGATTAAATTTATATTATTCCTTCCGGTTCTTTTTATAAAAGATAAATGTGTCAACAAAAATTGATGTATTTAGTTTATAATATTGACTAAATACATCAATTTTCGTTGATCCGTTTTTCTCTTATAAAAAAGTACCGAAAGGAGAGTATATGTAGATATTTATCCATATAATGATAGTTAAATATTAGATCATAAAAGAAAGAAAGAAACAATGTAATAAAATATTTGAATAGAGGAGAATTGCTATATGCTGCGAAGGAAATGATGCACGACCTGGATACGACAAAACGTGGGCAATGCTTTCACACTTTTAAAATAAATAAAGTAAAACACCACTTAAAGCAAAACTAAATCCAAGGGCTGGTGTGCATTCGTCGTTATTAGTCAACTCCTCTCTCGCACCATTTATCTTTCTCCATTTGAATAAACCTCTTTTAAAAAGAAAATATTTGAACATAATTTTCATTGCAGATTTGAGCGTGGAAAGGAGTTTCAACATTGAGTATGATATTGCCGAAATTGGGAACTTCGTCCGAAAGGTAACATGTGTTGCTGATGCTGCTAATGAAAGACCACAAAAGATTTCTTCCGCAGTCCAATGTGGCATAGGCAGAAAGGTTTTGAATTTCGTTGTTCGAATAATGCTTTCCGGTACGCTATGTTTTTTCTCTTTAACTATTTCAGTCTTCGAACATCACATATTAATAATCAAGACCTATGCCTTTTAACCGATACTTTTATGACACAAGTTAGCGAAACCTGTTTTTTATTACCTACATGAATATATATAAATGGCTCAAAGCTTTCATTTAGGTTGGCGCTTCTGCAAACTGCTGGTATCAATATTTCTCTTTTGGCCAGTAAAGCTTTTGGGTATGTCGTGTACTGTCTCATAGTGCAATATCATGCTTTAATCATTTCTTATTTCTTCTTCAATATTTTTTCTTTTTATTATTTCTACACTGATTTTGCTGATTTGTTCAGGTCAATTACTTTGTAAGATATTCCGTGGAGTTGCATATTTGTTGGTTCAAGTTTTCCATTACCTAGATATTAATGGTACGTAAATTCAAATGCAAAAGTTTGATTCATTTCATTAATTATCCAGTAAAAAAAAACTCATTAATTATTCCCTCACATTTCAAATATTGGTGATGAATTAGGGGAGCGGCTAAATAGTACGACTGATTTTTATACGAAAATTCACGAAGTGCAAATTGATATAAAAAATGCGTAATTTCCCCTCGTTTCTTTGAAAAAAGAACTAGATTAAACTAAAAAATAAAAAATAGAACAAACTTGACATAAAAGCTTTCTCATGCCACTAACAGCGAAGTTGGCAAAATTTGGAACAAGGGAGTTTAAAATCAATTTCATTATCTTTTGCAAGCTGCTTTGAAAAATCTATTCAAAAAACGTGTTAGCATGGAAGATGCCGACTCATAAATCACATCATGACGAATTTAAAGTTATCTTTTACTCTCAAATTAAAAAGTTGTTTAAATAATGAGAAAAAAAAATTACTTTGATTCATGAAATTTTGTATATACGATCAAATATTGGTTTCAATAATTAGAAAACTTCAATGTTCCAACCTGCAAAACTGTCTGCAACTCATGCGGAAACCTATATCAGTAGGAAAACATGTAACATCAGCTATCACACGAGTCAATTCGCTTTGCACCAATACTAATAACAATTGATATACTAATTTGCAATAGACACGAATACAATTATACACTATAAACCATACACCAGTCAACAAATCGATCGAACCGCAAAATATTGAACCATATTTGAAACATAATCCCTCCTACAACATAATTACTAATATAGTTGGAACGTCAACAAATCATAGTGATGTCTTAGCATTTAAAATATTGGTTAAAAAAAATCATTATGATTGATAGTTTAGAAAAAAGCTTGATATTGATGTTGCATGTAAAGCTTTCCTTATATGCTTAATTCGAATTGATTTTTTTTAACAACTCCAAGACTGATTAGGTCCCTTCAATTATGTCAGGAATCAGGAAGATATATGATCAGAAATACACACATTATGAAGTTATAGGAATATTGAGTTACTTCTGCCGAAGTGTTGGAAAATTTAATAGTTCCAAGCTCAAAGAGGCTTCTGCATATGAAGCAATGTTGCATGCATCCCAACACGGAATAATCGAGTTCATAAATGCCATGAGGGACGCTAATCCTAATTTTCTTTCAGCCGTCGATAGCTGCCATAGAGGCATATTTTCATATGCAATCTTGCATCGCAAACAAAATGTGTTTCAACTCATACATTCTGTCAATGGACGGAAGGAGATACTTAGACATCGTATAGACTCGTTTGGCAATAACTTGTTGCACCTGGCAGCACATTTAGGTCCTTCATCTGATCGTCATAGCAGATCCGGTGCTGCTCTGCAAATGCAAAGAGAGTTTCAATGGTTTAAGGTCACCCATCTAAATTAATTGTCTTCAATATTAGAAGTGCAAAATAATCAACGTATACTAGCTTTGTTGGCCATTTTACAAAACATGGTATAGGAAAATCCTTTTAGATTACATTTTATAAATACATATTAAGCATTTCCTAATAAATGTTGTTGAAACACCATATGTTCAGTACTCTAAAATTACACTCCAACAGTATTAGGTACGAAACACCCCTTCTGTTACGAAATATAAGTAAAAATGAGTTAATTTTTTTGGACCAAATACATCAAACTTTCGTTAACCAACTTTTGCTTATATTTCGTTACAGATATTGTTACAAAGCTCAAAATGAACCAAGAATCATGTGTTTCAACATTGTGATTTTAATGAAGCTCCAAAACCACATAATTCCACCAATCTATTTAATTACAGTATATGCATGTCTCTTGCTTCTTTATAAGTTGTTTATGATACCACTGCAGGCGGTTGAGAAAGTTTTACATCCCAAGTTTAAGGAAGCCGAAAATGATGATGGTAAGAAGCCTTATGAGATATTCATTGAAAGCCATGAGGAGCTAGTGAAAGATGGAGAGAAATGGGCAAAAGACACAGCAACATCTTATACAATTGTAGGTACTCTCATCACCACCATCATGTTTGCTGCAGCCTTTACAGTTCCAGGTGGAAACGACGACAAAACTGGTTTGCCCATCTTCTTACATGACAACATATTCACTGCATTTCTCATGGCAGACGCAGTATCTCTCTTCGCATCTGCGACTTCCGTCTTGATTTTCATTGGTATACTCACATCGCGTTATGCTGAGAAAGACTTTCTCAAGAGCTTGCCTTGGAAGTTATTGTTTGGTCTTTTGCTCCTTTTTCTCTCTGTTTGTTCTATGATAGTTGCATTTAGCGCTGCCATTATCGACATGATCTTAAAGGGATATGAAACCCATAAGTGGTTCATTGTAGTACCAATCATGGCACTTGGGAGTATTCCGATTATCGTTCTTGTAATATCACAGGTGAGCTTCATGTATGAAATCTTCCGCTCAACATGGAAAAATCCCATCCGTTCAATAAACAAATGA
Protein sequence

>MS.gene69634.t1

MMKSTGVASDGIVHQVLTKDNYERWKIVMQNYLQGQGLWDVVIQNADNRTDQASKKMKDGQQALHFFQLSSCKRDFLETVKKSGWNNFTNQNDPDSRAAPDLEQGQGLLGVIQTVSEFETDASWKIKDVKALHIIQLSCGREIADEISHFKTAKSAWNHLGSLYGKDLTAGADHEQDVDDSHSPKNKELFWKVMRGTPIGNIGMDSNVYMTSASRSSLLHAAVIAGNVENVELLVKVGKDKLICMQDEHGDTALALVARYTGNTEIAKCMVEEIKGLPETLLEKENNDNVIPILLAAANGHKELTSYLYSKTPTKSKVFDKSNSQNRVLLLSLCITAEIFDVALRLLRRFKDLPEQSLSIYNFSVPTLLRESLSLPSKISESDPLQQSLPDKFSALVALAKMPTSFPSGTQLGFLGQIIYENLSVERSFNIEYDIAEIGNFVRKVTCVADAANERPQKISSAVQCGIGRKVLNFVVRIMLSGQLLCKIFRGVAYLLVQVFHYLDINGIRKIYDQKYTHYEVIGILSYFCRSVGKFNSSKLKEASAYEAMLHASQHGIIEFINAMRDANPNFLSAVDSCHRGIFSYAILHRKQNVFQLIHSVNGRKEILRHRIDSFGNNLLHLAAHLGPSSDRHSRSGAALQMQREFQWFKAVEKVLHPKFKEAENDDGKKPYEIFIESHEELVKDGEKWAKDTATSYTIVGTLITTIMFAAAFTVPGGNDDKTGLPIFLHDNIFTAFLMADAVSLFASATSVLIFIGILTSRYAEKDFLKSLPWKLLFGLLLLFLSVCSMIVAFSAAIIDMILKGYETHKWFIVVPIMALGSIPIIVLVISQVSFMYEIFRSTWKNPIRSINK