AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene69689

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene69689.t1 MTR_8g065030 98.918 462 4 1 1 462 1 461 0.0 936
MS.gene69689.t1 MTR_7g091850 46.739 368 193 3 64 429 75 441 2.37e-117 351
MS.gene69689.t1 MTR_1g052315 46.049 367 194 4 66 430 65 429 7.26e-116 347
MS.gene69689.t1 MTR_2g103410 45.550 382 206 2 64 443 58 439 1.55e-115 347
MS.gene69689.t1 MTR_2g060350 44.595 370 198 6 64 429 73 439 3.37e-109 330
MS.gene69689.t1 MTR_6g005630 42.674 389 214 5 54 441 34 414 1.67e-107 325
MS.gene69689.t1 MTR_3g030540 44.800 375 193 4 41 409 46 412 1.57e-103 315
MS.gene69689.t1 MTR_4g094715 40.609 394 221 6 64 446 64 455 1.85e-101 311
MS.gene69689.t1 MTR_1g086390 40.148 406 221 8 64 456 80 476 3.46e-101 311
MS.gene69689.t1 MTR_7g110050 40.731 383 213 7 64 434 66 446 2.63e-99 305
MS.gene69689.t1 MTR_7g091840 45.714 315 167 3 64 375 64 377 1.76e-96 296
MS.gene69689.t1 MTR_6g005630 40.103 389 201 7 54 441 34 391 2.11e-93 288
MS.gene69689.t1 MTR_5g034090 40.106 379 197 6 64 415 120 495 3.28e-93 292
MS.gene69689.t1 MTR_8g065010 38.257 413 221 7 53 434 95 504 1.86e-92 290
MS.gene69689.t1 MTR_2g032710 40.204 393 222 6 53 434 55 445 3.47e-91 285
MS.gene69689.t1 MTR_5g033680 33.632 446 272 6 1 436 7 438 2.05e-87 275
MS.gene69689.t1 MTR_2g103650 38.843 363 214 5 66 421 29 390 2.79e-86 270
MS.gene69689.t1 MTR_3g084380 39.943 348 194 6 69 410 25 363 7.09e-86 269
MS.gene69689.t1 MTR_7g113910 45.031 322 142 5 125 443 74 363 1.33e-85 267
MS.gene69689.t1 MTR_4g083660 40.318 377 205 11 66 434 10 374 5.98e-83 260
MS.gene69689.t1 MTR_8g009810 39.737 380 220 7 54 430 24 397 1.72e-82 260
MS.gene69689.t1 MTR_3g438050 37.401 377 223 7 64 434 26 395 3.24e-80 254
MS.gene69689.t1 MTR_4g084050 36.911 382 217 9 66 434 24 394 1.33e-78 250
MS.gene69689.t1 MTR_2g049400 38.874 373 216 10 65 434 28 391 2.74e-78 249
MS.gene69689.t1 MTR_6g028080 35.185 378 225 10 66 434 31 397 3.33e-78 249
MS.gene69689.t1 MTR_3g084360 35.359 362 220 7 66 421 25 378 7.16e-76 243
MS.gene69689.t1 MTR_2g103410 46.538 260 138 1 64 322 58 317 3.82e-75 239
MS.gene69689.t1 MTR_3g054320 35.714 378 224 7 69 440 34 398 3.94e-75 241
MS.gene69689.t1 MTR_5g043350 36.418 335 201 5 66 395 30 357 2.03e-74 239
MS.gene69689.t1 MTR_0157s0060 37.265 373 211 7 70 434 3 360 2.34e-74 238
MS.gene69689.t1 MTR_4g034020 37.265 373 211 7 70 434 3 360 2.34e-74 238
MS.gene69689.t1 MTR_2g435640 38.462 351 205 7 61 405 49 394 3.91e-74 239
MS.gene69689.t1 MTR_8g030930 33.862 378 229 8 64 429 26 394 1.94e-71 231
MS.gene69689.t1 MTR_8g010070 34.392 378 222 11 64 434 30 388 3.69e-69 225
MS.gene69689.t1 MTR_2g029170 38.551 345 193 11 97 434 29 361 8.76e-68 221
MS.gene69689.t1 MTR_4g120320 35.279 377 230 9 61 429 48 418 3.06e-67 221
MS.gene69689.t1 MTR_1g088160 35.356 379 226 10 64 431 34 404 1.14e-66 219
MS.gene69689.t1 MTR_8g010090 33.777 376 226 9 64 434 30 387 1.16e-66 219
MS.gene69689.t1 MTR_8g010040 36.193 373 215 9 66 433 33 387 2.35e-66 218
MS.gene69689.t1 MTR_8g010110 33.598 378 228 8 64 436 30 389 4.47e-66 217
MS.gene69689.t1 MTR_5g034090 39.860 286 144 4 64 322 120 404 4.59e-66 218
MS.gene69689.t1 MTR_1g012390 35.185 378 227 10 66 435 29 396 6.22e-66 217
MS.gene69689.t1 MTR_2g058640 35.328 351 214 5 63 406 23 367 4.80e-64 213
MS.gene69689.t1 MTR_2g058840 34.711 363 216 7 64 416 24 375 6.14e-64 213
MS.gene69689.t1 MTR_8g010080 32.620 374 232 7 64 434 30 386 1.18e-63 211
MS.gene69689.t1 MTR_2g058670 34.795 365 215 8 64 416 24 377 1.98e-63 211
MS.gene69689.t1 MTR_1g013740 31.414 382 232 9 61 435 31 389 1.07e-61 206
MS.gene69689.t1 MTR_8g008765 34.347 329 197 5 64 389 30 342 1.29e-60 202
MS.gene69689.t1 MTR_7g035415 39.796 294 159 6 64 351 39 320 2.68e-60 200
MS.gene69689.t1 MTR_5g063430 34.219 301 182 6 64 359 24 313 1.57e-58 195
MS.gene69689.t1 MTR_1g013730 30.670 388 237 10 54 434 18 380 4.34e-58 196
MS.gene69689.t1 MTR_5g097860 35.185 324 199 8 64 382 24 341 2.78e-55 187
MS.gene69689.t1 MTR_8g010050 30.688 378 202 12 64 434 30 354 3.79e-53 182
MS.gene69689.t1 MTR_8g077320 37.086 302 145 7 64 351 32 302 8.44e-53 182
MS.gene69689.t1 MTR_8g008700 34.201 269 159 4 123 389 13 265 4.43e-46 162
MS.gene69689.t1 MTR_8g031180 39.423 208 117 3 208 409 73 277 1.40e-41 149
MS.gene69689.t1 MTR_2g100040 30.141 355 189 10 56 404 16 317 6.55e-40 147
MS.gene69689.t1 MTR_4g124980 26.037 434 268 15 63 456 72 492 3.53e-28 117
MS.gene69689.t1 MTR_2g042740 25.056 447 282 16 47 456 42 472 6.81e-26 110
MS.gene69689.t1 MTR_7g110710 29.947 374 217 14 65 405 43 404 1.02e-24 106
MS.gene69689.t1 MTR_7g110710 29.947 374 217 14 65 405 43 404 1.18e-24 106
MS.gene69689.t1 MTR_4g120730 25.128 390 250 14 65 422 40 419 2.42e-23 102
MS.gene69689.t1 MTR_1g086030 29.532 342 204 12 65 377 82 415 1.37e-22 100
MS.gene69689.t1 MTR_1g100040 27.202 386 239 13 51 406 45 418 1.44e-21 97.4
MS.gene69689.t1 MTR_1g100060 27.062 388 237 14 51 406 82 455 1.99e-21 97.4
MS.gene69689.t1 MTR_2g435340 24.808 391 250 13 65 422 37 416 3.46e-21 96.3
MS.gene69689.t1 MTR_1g100050 27.062 388 237 14 51 406 39 412 9.68e-21 95.1
MS.gene69689.t1 MTR_3g096330 25.000 400 251 13 62 426 73 458 1.88e-20 95.1
MS.gene69689.t1 MTR_7g088550 26.287 369 230 13 70 406 55 413 3.61e-20 93.2
MS.gene69689.t1 MTR_8g098840 25.316 395 250 15 66 426 45 428 6.96e-20 92.4
MS.gene69689.t1 MTR_5g090160 25.594 379 239 11 65 411 44 411 7.95e-19 89.0
MS.gene69689.t1 MTR_1g086030 28.522 291 175 10 115 377 26 311 8.90e-19 88.6
MS.gene69689.t1 MTR_8g028725 25.240 416 262 13 65 444 55 457 1.01e-18 89.0
MS.gene69689.t1 MTR_7g078680 25.185 405 254 12 66 434 56 447 1.90e-18 88.2
MS.gene69689.t1 MTR_1g099850 26.829 369 227 13 70 406 60 417 3.61e-17 84.0
MS.gene69689.t1 MTR_2g435340 25.260 289 197 8 152 427 74 356 4.07e-17 83.2
MS.gene69689.t1 MTR_3g449590 23.810 378 246 12 65 411 47 413 3.48e-16 80.9
MS.gene69689.t1 MTR_8g007320 38.571 70 43 0 361 430 22 91 1.69e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene69689.t1 AT1G23460 68.000 450 138 3 14 462 16 460 0.0 629
MS.gene69689.t1 AT1G23460 68.864 440 132 2 24 462 1 436 0.0 624
MS.gene69689.t1 AT1G70500 63.617 470 161 6 1 462 1 468 0.0 617
MS.gene69689.t1 AT1G80170 47.927 386 195 4 64 446 52 434 7.82e-126 373
MS.gene69689.t1 AT3G07970 46.957 345 178 4 66 408 72 413 2.08e-111 336
MS.gene69689.t1 AT3G57510 45.652 368 190 6 65 429 68 428 6.57e-109 329
MS.gene69689.t1 AT2G41850 46.467 368 187 5 65 429 68 428 3.21e-105 320
MS.gene69689.t1 AT4G01890 43.210 405 212 9 53 441 53 455 1.47e-104 319
MS.gene69689.t1 AT1G02460 41.902 389 208 8 64 436 88 474 2.97e-104 319
MS.gene69689.t1 AT1G56710 42.119 387 208 8 61 434 44 427 1.20e-102 313
MS.gene69689.t1 AT5G14650 40.399 401 225 7 57 453 43 433 5.03e-101 309
MS.gene69689.t1 AT1G48100 39.791 382 217 6 64 434 79 458 1.29e-98 304
MS.gene69689.t1 AT1G10640 39.851 404 210 7 61 434 115 515 1.89e-96 300
MS.gene69689.t1 AT3G26610 36.652 442 258 8 5 440 9 434 1.02e-91 286
MS.gene69689.t1 AT1G60590 37.717 403 215 7 66 435 124 523 2.11e-91 288
MS.gene69689.t1 AT3G15720 39.633 381 210 8 65 437 24 392 8.89e-89 278
MS.gene69689.t1 AT3G15720 39.633 381 210 8 65 437 23 391 9.22e-89 278
MS.gene69689.t1 AT3G15720 39.108 381 209 9 65 437 23 388 5.87e-86 271
MS.gene69689.t1 AT2G43890 39.084 371 216 8 66 434 30 392 9.41e-86 268
MS.gene69689.t1 AT4G35670 40.230 348 197 4 66 410 25 364 7.29e-85 266
MS.gene69689.t1 AT1G80170 48.462 260 133 1 64 322 52 311 8.95e-85 264
MS.gene69689.t1 AT2G43880 38.798 366 215 7 66 429 32 390 2.52e-83 262
MS.gene69689.t1 AT1G05660 37.067 375 225 9 64 435 27 393 5.89e-83 261
MS.gene69689.t1 AT1G05650 36.533 375 229 7 63 435 26 393 8.25e-82 258
MS.gene69689.t1 AT2G43870 40.426 376 204 12 66 434 22 384 9.97e-82 258
MS.gene69689.t1 AT1G65570 41.176 374 209 9 65 434 31 397 1.22e-81 258
MS.gene69689.t1 AT3G59850 40.214 373 211 10 66 434 24 388 3.65e-81 256
MS.gene69689.t1 AT5G27530 36.719 384 208 4 64 444 52 403 6.45e-81 258
MS.gene69689.t1 AT3G59850 40.214 373 211 10 66 434 68 432 8.13e-81 257
MS.gene69689.t1 AT1G80140 38.576 337 189 7 101 429 6 332 3.64e-78 247
MS.gene69689.t1 AT5G44840 38.462 351 204 6 64 410 23 365 5.29e-78 248
MS.gene69689.t1 AT3G15720 39.349 338 186 7 107 437 3 328 8.16e-77 245
MS.gene69689.t1 AT2G43860 38.770 374 217 10 65 434 33 398 3.06e-76 244
MS.gene69689.t1 AT1G17150 36.074 377 228 9 64 434 32 401 2.67e-73 236
MS.gene69689.t1 AT2G15450 34.465 383 232 10 64 435 30 404 1.99e-72 234
MS.gene69689.t1 AT1G78400 34.828 379 231 8 61 431 31 401 2.98e-72 234
MS.gene69689.t1 AT2G15460 34.483 377 229 9 64 429 30 399 8.11e-72 233
MS.gene69689.t1 AT2G33160 36.292 383 223 9 60 430 27 400 1.52e-71 239
MS.gene69689.t1 AT2G15470 34.204 383 233 10 64 435 30 404 8.37e-71 230
MS.gene69689.t1 AT1G43080 34.417 369 224 9 64 421 30 391 2.64e-70 229
MS.gene69689.t1 AT2G26620 34.474 380 234 8 64 435 30 402 3.87e-70 228
MS.gene69689.t1 AT5G17200 35.230 369 205 7 60 405 34 391 5.69e-70 228
MS.gene69689.t1 AT4G18180 36.901 355 212 7 64 410 38 388 8.94e-70 228
MS.gene69689.t1 AT1G43090 34.146 369 225 9 64 421 30 391 1.44e-69 228
MS.gene69689.t1 AT4G13760 33.594 384 234 11 64 435 30 404 1.34e-68 224
MS.gene69689.t1 AT1G43100 33.875 369 226 9 64 421 30 391 1.71e-68 225
MS.gene69689.t1 AT5G14650 41.573 267 151 3 57 322 43 305 5.48e-68 220
MS.gene69689.t1 AT2G43880 39.933 298 170 7 66 361 32 322 7.82e-67 217
MS.gene69689.t1 AT5G44830 37.898 314 175 5 99 410 11 306 1.46e-66 217
MS.gene69689.t1 AT1G02790 34.160 363 223 8 47 406 34 383 4.22e-66 218
MS.gene69689.t1 AT3G07840 33.684 380 243 5 66 441 22 396 7.10e-66 217
MS.gene69689.t1 AT2G40310 33.158 380 237 9 66 435 32 404 2.34e-65 216
MS.gene69689.t1 AT3G14040 35.433 381 235 8 56 431 62 436 6.82e-64 213
MS.gene69689.t1 AT4G32380 32.804 378 238 7 52 420 12 382 2.14e-63 212
MS.gene69689.t1 AT5G48140 34.302 344 214 6 78 416 34 370 1.93e-61 205
MS.gene69689.t1 AT3G07850 34.946 372 231 8 65 431 70 435 4.83e-61 206
MS.gene69689.t1 AT4G35670 39.245 265 153 2 146 410 1 257 2.13e-59 196
MS.gene69689.t1 AT3G07830 31.476 359 235 6 78 431 34 386 5.65e-59 199
MS.gene69689.t1 AT5G39910 30.239 377 199 6 64 435 35 352 1.38e-58 197
MS.gene69689.t1 AT4G32370 35.756 344 203 9 35 367 2 338 7.59e-57 192
MS.gene69689.t1 AT3G07820 31.198 359 236 6 63 416 18 370 1.61e-56 192
MS.gene69689.t1 AT4G32375 34.266 286 178 3 137 419 3 281 3.80e-54 187
MS.gene69689.t1 AT4G32380 34.395 314 192 7 52 360 12 316 5.61e-47 167
MS.gene69689.t1 AT3G62110 30.836 347 194 14 65 377 43 377 1.04e-26 112
MS.gene69689.t1 AT3G62110 30.836 347 194 14 65 377 43 377 1.04e-26 112
MS.gene69689.t1 AT2G23900 25.575 391 243 13 67 421 58 436 9.30e-25 107
MS.gene69689.t1 AT3G42950 25.000 428 267 16 63 454 64 473 5.35e-23 102
MS.gene69689.t1 AT5G41870 28.158 380 218 14 64 405 44 406 4.40e-22 99.0
MS.gene69689.t1 AT1G19170 24.048 420 268 14 45 429 72 475 6.58e-22 98.6
MS.gene69689.t1 AT4G23820 27.436 390 238 15 65 421 41 418 6.63e-22 98.2
MS.gene69689.t1 AT3G48950 24.932 369 233 10 70 405 50 407 1.59e-21 97.4
MS.gene69689.t1 AT5G49215 24.747 396 257 12 44 409 22 406 5.72e-21 95.5
MS.gene69689.t1 AT5G49215 24.747 396 257 12 44 409 24 408 7.58e-21 95.1
MS.gene69689.t1 AT4G33440 25.700 393 251 12 62 423 69 451 2.81e-20 93.6
MS.gene69689.t1 AT4G23500 25.558 403 255 13 66 434 69 460 4.66e-20 93.2
MS.gene69689.t1 AT3G06770 25.737 373 230 12 65 403 44 403 4.09e-19 90.1
MS.gene69689.t1 AT3G06770 26.005 373 229 13 65 403 43 402 4.14e-19 89.7
MS.gene69689.t1 AT3G61490 23.919 393 258 13 66 426 46 429 1.88e-16 82.0
MS.gene69689.t1 AT3G61490 23.919 393 258 13 66 426 46 429 1.88e-16 82.0
MS.gene69689.t1 AT3G61490 23.919 393 258 13 66 426 46 429 1.88e-16 82.0
MS.gene69689.t1 AT3G61490 24.324 370 241 12 66 405 61 421 1.93e-16 82.0
MS.gene69689.t1 AT3G16850 22.762 391 256 12 65 422 40 417 3.45e-16 80.9
MS.gene69689.t1 AT3G61490 24.324 370 241 12 66 405 159 519 3.68e-16 81.3
MS.gene69689.t1 AT3G06770 24.601 313 195 9 122 403 31 333 2.37e-15 77.8
MS.gene69689.t1 AT3G06770 24.601 313 195 9 122 403 31 333 2.37e-15 77.8
MS.gene69689.t1 AT3G06770 24.585 301 186 9 134 403 25 315 1.07e-13 72.8

Find 95 sgRNAs with CRISPR-Local

Find 189 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATGCATCTGTTGGCTATTC+TGG 0.169467 8.3:-37006371 None:intergenic
GGAACCAATAGAACAGATTT+TGG 0.208488 8.3:-37005751 None:intergenic
AGCCAAACGCGTGGAAGTTT+TGG 0.227777 8.3:-37005977 None:intergenic
TGCCATTCAGCTCAAGGATT+TGG 0.250772 8.3:+37008742 MS.gene69689:CDS
TTGTAGTCCCACTTACATTT+TGG 0.252854 8.3:-37008612 None:intergenic
TGTAGTCACGAAAGTGATTT+TGG 0.253475 8.3:+37007741 MS.gene69689:CDS
GTCACTGCAGTCAAATTTAA+TGG 0.268057 8.3:-37008647 None:intergenic
AAATATGGACAGATTCTTCT+TGG 0.276621 8.3:+37005332 None:intergenic
ATAGTGGCGAATGGAGTTTC+AGG 0.295850 8.3:+37005375 MS.gene69689:CDS
GTTAATGCAACGAAATTCAT+AGG 0.304534 8.3:+37005793 MS.gene69689:CDS
AGTTCATCTATAAAGGTTAA+AGG 0.314242 8.3:+37006339 MS.gene69689:CDS
ATTGTCCAAGACTGCAAAAT+TGG 0.318689 8.3:+37006501 MS.gene69689:CDS
ATATGAATTCCATCAGTGTT+TGG 0.320024 8.3:-37006459 None:intergenic
ACAAGGTAACGGCGTCCTTT+AGG 0.328112 8.3:-37005772 None:intergenic
TACACCAAAATCTGTTCTAT+TGG 0.328917 8.3:+37005747 MS.gene69689:CDS
AGTCCTTAGCAATGTTGATT+TGG 0.335788 8.3:+37008690 MS.gene69689:CDS
TTTCTTCCAGTCATCAGCTT+TGG 0.352016 8.3:+37008570 MS.gene69689:intron
GTGGACCGGGACATGGAATC+AGG 0.364502 8.3:+37006901 MS.gene69689:CDS
TCAGCTCAAGGATTTGGATA+TGG 0.367389 8.3:+37008748 MS.gene69689:CDS
CGATACAAGTTCATCTATAA+AGG 0.367696 8.3:+37006332 MS.gene69689:CDS
TCCCAGTTCTTAGGATCTTC+CGG 0.369647 8.3:-37005953 None:intergenic
GGAGGTGCTGGATATGTTAA+AGG 0.370065 8.3:+37008279 MS.gene69689:CDS
AACTTTCTGACATACCTTCA+TGG 0.370106 8.3:+37005478 MS.gene69689:CDS
ATCCAAAACTTCCACGCGTT+TGG 0.373107 8.3:+37005975 MS.gene69689:CDS
TTTGCATTTCTCCAGATTGA+TGG 0.378623 8.3:+37005917 MS.gene69689:intron
TTCTTCTTGGTTTCTTTACT+CGG 0.379428 8.3:+37005345 MS.gene69689:CDS
TATGAATTCCATCAGTGTTT+GGG 0.383269 8.3:-37006458 None:intergenic
AGCTTTGGTGCTGCAGGAAA+TGG 0.388430 8.3:+37005540 MS.gene69689:CDS
TTTACTCGGTTTGCTTATAG+TGG 0.390214 8.3:+37005359 MS.gene69689:CDS
TAAAATTGATCTATAAGAAT+GGG 0.393440 8.3:-37008342 None:intergenic
GCAGTCAAATTTAATGGCCT+TGG 0.403608 8.3:-37008641 None:intergenic
CTCCGGAAGATCCTAAGAAC+TGG 0.407663 8.3:+37005951 MS.gene69689:CDS
TCAGTGTTTGGGCTGTCTCC+TGG 0.409156 8.3:-37006447 None:intergenic
CAAGGCTCTGGAGTTATTGA+CGG 0.420399 8.3:+37006031 MS.gene69689:CDS
TTGGATACAGCACTTCTAAA+GGG 0.432719 8.3:+37007760 MS.gene69689:CDS
TTGACGGCTCAGGAAGTAAA+TGG 0.432957 8.3:+37006047 MS.gene69689:CDS
CTTGGTAAAGATAACTCAAC+TGG 0.447181 8.3:+37007718 MS.gene69689:CDS
TTTGGATACAGCACTTCTAA+AGG 0.453983 8.3:+37007759 MS.gene69689:CDS
CTTGTGAATATAGATAGCTT+TGG 0.454173 8.3:+37005525 MS.gene69689:CDS
GTAAAATTGATCTATAAGAA+TGG 0.463416 8.3:-37008343 None:intergenic
CAAGACTGCAAAATTGGAAC+AGG 0.468126 8.3:+37006507 MS.gene69689:CDS
ATAGATAGCTTTGGTGCTGC+AGG 0.470470 8.3:+37005534 MS.gene69689:CDS
TGATGGAACACTGGTTGCTC+CGG 0.475544 8.3:+37005934 MS.gene69689:CDS
TAACTATAGTTCTGTGTGAC+GGG 0.476817 8.3:-37008866 None:intergenic
TCTGTTCTATTGGTTCCTAA+AGG 0.479333 8.3:+37005757 MS.gene69689:CDS
ACCGTTGGTGCACCTTTGCA+AGG 0.479936 8.3:-37006211 None:intergenic
GAGGTGCTGGATATGTTAAA+GGG 0.497893 8.3:+37008280 MS.gene69689:CDS
TATAGATGAACTTGTATCGA+TGG 0.501752 8.3:-37006328 None:intergenic
ATCCAAATCCTTGAGCTGAA+TGG 0.502123 8.3:-37008744 None:intergenic
ATGATTAGATTGTCTTTACA+AGG 0.505103 8.3:-37005817 None:intergenic
AGTCTTAATTCTAAGACCAT+TGG 0.510878 8.3:-37007788 None:intergenic
ATGATGTGCGACAACAACTT+TGG 0.511955 8.3:+37005402 MS.gene69689:CDS
CCGCGTTCGCTTGTCCATGA+AGG 0.523462 8.3:-37005492 None:intergenic
ACATATTGCCATTCAGCTCA+AGG 0.523769 8.3:+37008736 MS.gene69689:CDS
CATGTCATGTAGGGAGGTGC+TGG 0.523870 8.3:+37008267 MS.gene69689:intron
TAAAGACAATCTAATCATCC+AGG 0.530090 8.3:+37005822 MS.gene69689:CDS
GGAGTGAAAGTGGCTTCACC+AGG 0.530394 8.3:+37006429 MS.gene69689:CDS
TTAATGCAACGAAATTCATA+GGG 0.535160 8.3:+37005794 MS.gene69689:CDS
TCTTAGAATTAAGACTTGGC+AGG 0.540406 8.3:+37007795 MS.gene69689:CDS
TCTCCAAATCAACATTGCTA+AGG 0.541315 8.3:-37008693 None:intergenic
GTTGATTTGGAGAAACAAGA+TGG 0.543075 8.3:+37008703 MS.gene69689:CDS
ATATCGTAAAATGCATCTGT+TGG 0.547197 8.3:-37006380 None:intergenic
GAATTAAGGCATTCAGCTGA+AGG 0.547826 8.3:-37008781 None:intergenic
ATAATGTACCAAAATGTAAG+TGG 0.551720 8.3:+37008604 MS.gene69689:CDS
TGAATTTCGTTGCATTAACA+AGG 0.555793 8.3:-37005789 None:intergenic
CGTCAATAACTCCAGAGCCT+TGG 0.555802 8.3:-37006030 None:intergenic
TCTCCAGATTGATGGAACAC+TGG 0.557615 8.3:+37005925 MS.gene69689:intron
TTAACTATAGTTCTGTGTGA+CGG 0.558669 8.3:-37008867 None:intergenic
TGACACAGAGGAAGATTATG+AGG 0.559293 8.3:+37005449 MS.gene69689:CDS
CTTCTAAAGGGGACTACCAA+TGG 0.563594 8.3:+37007772 MS.gene69689:CDS
TCTGGAGTTATTGACGGCTC+AGG 0.564729 8.3:+37006037 MS.gene69689:CDS
GGAGACAGCCCAAACACTGA+TGG 0.574863 8.3:+37006450 MS.gene69689:CDS
TGGATACAGCACTTCTAAAG+GGG 0.580220 8.3:+37007761 MS.gene69689:CDS
TCGTTGCATTAACAAGGTAA+CGG 0.584606 8.3:-37005783 None:intergenic
CATAATCTTCCTCTGTGTCA+AGG 0.592302 8.3:-37005446 None:intergenic
GGTTTGCTTATAGTGGCGAA+TGG 0.593921 8.3:+37005366 MS.gene69689:CDS
TGATACCTGATTCCATGTCC+CGG 0.596840 8.3:-37006906 None:intergenic
GCCTTGCAAAGGTGCACCAA+CGG 0.604733 8.3:+37006210 MS.gene69689:intron
TCCGGAAGATCCTAAGAACT+GGG 0.607519 8.3:+37005952 MS.gene69689:CDS
CTAAGGACTAAGTTGCTGCA+TGG 0.619838 8.3:-37008676 None:intergenic
AAAATTGATCTATAAGAATG+GGG 0.621737 8.3:-37008341 None:intergenic
CGGCTCAGGAAGTAAATGGT+GGG 0.625021 8.3:+37006051 MS.gene69689:CDS
ATGGTCTTAGAATTAAGACT+TGG 0.628616 8.3:+37007791 MS.gene69689:CDS
GGGTACGCTTTCAGAATGTG+AGG 0.631944 8.3:+37008301 MS.gene69689:CDS
ACGGCTCAGGAAGTAAATGG+TGG 0.633961 8.3:+37006050 MS.gene69689:CDS
CCTTCATGGACAAGCGAACG+CGG 0.635643 8.3:+37005492 MS.gene69689:CDS
TAATGTACCAAAATGTAAGT+GGG 0.636159 8.3:+37008605 MS.gene69689:CDS
TCCAACCTCATGTCAAAACC+AGG 0.643988 8.3:+37008374 MS.gene69689:CDS
TGGAGAAACTGATGATACTG+AGG 0.647771 8.3:+37005560 MS.gene69689:CDS
TGGGACTACAAATAGTGCCA+AGG 0.654414 8.3:+37008624 MS.gene69689:CDS
ACGCTTTCAGAATGTGAGGG+TGG 0.678654 8.3:+37008305 MS.gene69689:CDS
ACTCAACAACCTTGACACAG+AGG 0.681814 8.3:+37005437 MS.gene69689:CDS
GGTACGCTTTCAGAATGTGA+GGG 0.685332 8.3:+37008302 MS.gene69689:CDS
AGGTGCTGGATATGTTAAAG+GGG 0.703846 8.3:+37008281 MS.gene69689:CDS
TCATGGACAAGCGAACGCGG+CGG 0.737434 8.3:+37005495 MS.gene69689:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATAAATTTATATTGTAC+TGG + chr8.3:37007618-37007637 MS.gene69689:intron 10.0%
!! TATACTTGATTAATTAATTA+TGG + chr8.3:37008480-37008499 MS.gene69689:intron 10.0%
!! TAAAAATAAACTTATATTGC+AGG + chr8.3:37006146-37006165 MS.gene69689:intron 15.0%
!! TAAAATATAGAATACAACAA+TGG - chr8.3:37006255-37006274 None:intergenic 15.0%
!! TAAAATTGATCTATAAGAAT+GGG - chr8.3:37008345-37008364 None:intergenic 15.0%
!! TAATCAAATTAAACATATTC+AGG + chr8.3:37007446-37007465 MS.gene69689:intron 15.0%
!! TACAAGTTAAATATTAATGT+AGG - chr8.3:37008538-37008557 None:intergenic 15.0%
!!! ATTGATCAATTCTTATTTAT+AGG + chr8.3:37005693-37005712 MS.gene69689:intron 15.0%
!!! CTTTTTAATTTTTTTACAGA+AGG - chr8.3:37007115-37007134 None:intergenic 15.0%
!!! TCATTTAAAATCACATAAAA+TGG + chr8.3:37006778-37006797 MS.gene69689:intron 15.0%
!!! TGTAAAATTTTCAGAATATT+TGG + chr8.3:37006102-37006121 MS.gene69689:intron 15.0%
!! AAAATTGATCTATAAGAATG+GGG - chr8.3:37008344-37008363 None:intergenic 20.0%
!! AATAACTACTTTACCTAATA+TGG - chr8.3:37007654-37007673 None:intergenic 20.0%
!! GAATAAAGTTTATGTTAGTT+AGG - chr8.3:37008055-37008074 None:intergenic 20.0%
!! GTAAAATTGATCTATAAGAA+TGG - chr8.3:37008346-37008365 None:intergenic 20.0%
!! TCTAGAAAGATAAAAAAAGT+GGG - chr8.3:37007513-37007532 None:intergenic 20.0%
!! TGTTGAACATAGAAAAAAAT+AGG - chr8.3:37005615-37005634 None:intergenic 20.0%
!! TTAAAATAATGTTATGTGTG+TGG - chr8.3:37007553-37007572 None:intergenic 20.0%
!! TTTAGTTATTTGAATTTCAG+AGG - chr8.3:37007224-37007243 None:intergenic 20.0%
!!! AAAATGAAGAGAATTTTTTG+TGG + chr8.3:37006882-37006901 MS.gene69689:CDS 20.0%
!!! ACATTGATTTTGAACTAAAT+TGG - chr8.3:37006947-37006966 None:intergenic 20.0%
!!! ATTGATTTTGAACTAAATTG+GGG - chr8.3:37006945-37006964 None:intergenic 20.0%
!!! CACACATAACATTATTTTAA+TGG + chr8.3:37007553-37007572 MS.gene69689:intron 20.0%
!!! CATTGATTTTGAACTAAATT+GGG - chr8.3:37006946-37006965 None:intergenic 20.0%
!!! CTATTTTCATCATTTTAACT+TGG - chr8.3:37007269-37007288 None:intergenic 20.0%
!!! CTTTTTTTTTTTTACAGCAT+TGG + chr8.3:37007691-37007710 MS.gene69689:intron 20.0%
!!! TGATTTTACTAGTAAATACT+TGG - chr8.3:37007195-37007214 None:intergenic 20.0%
!!! TTCTAGAAAGATAAAAAAAG+TGG - chr8.3:37007514-37007533 None:intergenic 20.0%
! AGTTCATCTATAAAGGTTAA+AGG + chr8.3:37006339-37006358 MS.gene69689:CDS 25.0%
! ATAATGTACCAAAATGTAAG+TGG + chr8.3:37008604-37008623 MS.gene69689:CDS 25.0%
! ATGATTAGATTGTCTTTACA+AGG - chr8.3:37005820-37005839 None:intergenic 25.0%
! ATTTATATTGTACTGGAAAG+TGG + chr8.3:37007625-37007644 MS.gene69689:intron 25.0%
! TAACTGTGCTATATTATTCA+GGG + chr8.3:37006820-37006839 MS.gene69689:intron 25.0%
! TAATGTACCAAAATGTAAGT+GGG + chr8.3:37008605-37008624 MS.gene69689:CDS 25.0%
! TACAATTACAATTACTGACA+TGG + chr8.3:37005892-37005911 MS.gene69689:intron 25.0%
! TAGTTTAACTATGAGTTTAG+TGG + chr8.3:37008097-37008116 MS.gene69689:intron 25.0%
! TGATTTCGGTAAAAGTTATA+CGG - chr8.3:37006613-37006632 None:intergenic 25.0%
! TTAATGCAACGAAATTCATA+GGG + chr8.3:37005794-37005813 MS.gene69689:CDS 25.0%
! TTTATGTTAGTTAGGTTCAT+GGG - chr8.3:37008047-37008066 None:intergenic 25.0%
!! GAAGAAGCATACATTTAATA+AGG - chr8.3:37006576-37006595 None:intergenic 25.0%
!! GTTTAAAATTAGAGTGCTTA+TGG + chr8.3:37006984-37007003 MS.gene69689:intron 25.0%
!! TAGGATAAAATTTGCTTGAT+TGG - chr8.3:37008519-37008538 None:intergenic 25.0%
!! TATAACTTTTACCGAAATCA+CGG + chr8.3:37006613-37006632 MS.gene69689:intron 25.0%
!! TTAAATTCTAGTTGCATGTT+TGG - chr8.3:37006667-37006686 None:intergenic 25.0%
!! TTGATTTTGAACTAAATTGG+GGG - chr8.3:37006944-37006963 None:intergenic 25.0%
!!! AAATGTAGTTTTAACTCTGA+AGG + chr8.3:37006284-37006303 MS.gene69689:intron 25.0%
!!! AAGTTTTATCACTGGAATTA+AGG - chr8.3:37008798-37008817 None:intergenic 25.0%
!!! AATGTAGTTTTAACTCTGAA+GGG + chr8.3:37006285-37006304 MS.gene69689:intron 25.0%
AACTGTGCTATATTATTCAG+GGG + chr8.3:37006821-37006840 MS.gene69689:intron 30.0%
AATAACGTGAGTTACATTAC+CGG + chr8.3:37007938-37007957 MS.gene69689:intron 30.0%
ATATCGTAAAATGCATCTGT+TGG - chr8.3:37006383-37006402 None:intergenic 30.0%
ATATGAATTCCATCAGTGTT+TGG - chr8.3:37006462-37006481 None:intergenic 30.0%
CACTTACATTTCAGAACTAT+GGG + chr8.3:37008191-37008210 MS.gene69689:intron 30.0%
CGATACAAGTTCATCTATAA+AGG + chr8.3:37006332-37006351 MS.gene69689:CDS 30.0%
CTAACTGTGCTATATTATTC+AGG + chr8.3:37006819-37006838 MS.gene69689:intron 30.0%
CTTGTGAATATAGATAGCTT+TGG + chr8.3:37005525-37005544 MS.gene69689:CDS 30.0%
GTTAATGCAACGAAATTCAT+AGG + chr8.3:37005793-37005812 MS.gene69689:CDS 30.0%
GTTTATGTTAGTTAGGTTCA+TGG - chr8.3:37008048-37008067 None:intergenic 30.0%
TAAAGACAATCTAATCATCC+AGG + chr8.3:37005822-37005841 MS.gene69689:CDS 30.0%
TACACCAAAATCTGTTCTAT+TGG + chr8.3:37005747-37005766 MS.gene69689:CDS 30.0%
TATAGATGAACTTGTATCGA+TGG - chr8.3:37006331-37006350 None:intergenic 30.0%
TATGAATTCCATCAGTGTTT+GGG - chr8.3:37006461-37006480 None:intergenic 30.0%
TCACTTACATTTCAGAACTA+TGG + chr8.3:37008190-37008209 MS.gene69689:intron 30.0%
TGAATTTCGTTGCATTAACA+AGG - chr8.3:37005792-37005811 None:intergenic 30.0%
TTATGTTAGTTAGGTTCATG+GGG - chr8.3:37008046-37008065 None:intergenic 30.0%
TTCTTCTTGGTTTCTTTACT+CGG + chr8.3:37005345-37005364 MS.gene69689:CDS 30.0%
! AAATTAGAGTGCTTATGGAA+TGG + chr8.3:37006989-37007008 MS.gene69689:intron 30.0%
! ATGGTCTTAGAATTAAGACT+TGG + chr8.3:37007791-37007810 MS.gene69689:CDS 30.0%
! TTTCTAGAAGAGTTAGTTAC+AGG + chr8.3:37007525-37007544 MS.gene69689:intron 30.0%
!! AGTCTTAATTCTAAGACCAT+TGG - chr8.3:37007791-37007810 None:intergenic 30.0%
!! ATCTTGAGAAGTTTTATCAC+TGG - chr8.3:37008806-37008825 None:intergenic 30.0%
!! TGTTTTGTTCATGTCATGTA+GGG + chr8.3:37008258-37008277 MS.gene69689:intron 30.0%
!! TTGTTTTGTTCATGTCATGT+AGG + chr8.3:37008257-37008276 MS.gene69689:intron 30.0%
AACTTTCTGACATACCTTCA+TGG + chr8.3:37005478-37005497 MS.gene69689:CDS 35.0%
AAGAAAGTTGTTCTTACCGT+TGG - chr8.3:37006229-37006248 None:intergenic 35.0%
ACATGCACTTTACACATTCA+AGG + chr8.3:37005632-37005651 MS.gene69689:intron 35.0%
AGACACAAAAGTTTCATGAG+TGG - chr8.3:37007037-37007056 None:intergenic 35.0%
ATCAACTTCATGTGAGTTTG+GGG - chr8.3:37007475-37007494 None:intergenic 35.0%
ATGTTTATGATTGAGTCGTG+CGG + chr8.3:37006549-37006568 MS.gene69689:intron 35.0%
ATTGTCCAAGACTGCAAAAT+TGG + chr8.3:37006501-37006520 MS.gene69689:CDS 35.0%
CATCAACTTCATGTGAGTTT+GGG - chr8.3:37007476-37007495 None:intergenic 35.0%
CTTGGTAAAGATAACTCAAC+TGG + chr8.3:37007718-37007737 MS.gene69689:CDS 35.0%
GTCACTGCAGTCAAATTTAA+TGG - chr8.3:37008650-37008669 None:intergenic 35.0%
TATAGCACAGTTAGTCAATG+TGG - chr8.3:37006813-37006832 None:intergenic 35.0%
TATAGGCTCTTCAAAAAGCA+TGG + chr8.3:37005710-37005729 MS.gene69689:intron 35.0%
TCGTTGCATTAACAAGGTAA+CGG - chr8.3:37005786-37005805 None:intergenic 35.0%
TCTCCAAATCAACATTGCTA+AGG - chr8.3:37008696-37008715 None:intergenic 35.0%
TCTTAGAATTAAGACTTGGC+AGG + chr8.3:37007795-37007814 MS.gene69689:CDS 35.0%
TGGAAAGTGGAAACCATATT+AGG + chr8.3:37007638-37007657 MS.gene69689:intron 35.0%
TTGGATACAGCACTTCTAAA+GGG + chr8.3:37007760-37007779 MS.gene69689:CDS 35.0%
TTTGCATTTCTCCAGATTGA+TGG + chr8.3:37005917-37005936 MS.gene69689:intron 35.0%
TTTGGATACAGCACTTCTAA+AGG + chr8.3:37007759-37007778 MS.gene69689:CDS 35.0%
! AGTCCTTAGCAATGTTGATT+TGG + chr8.3:37008690-37008709 MS.gene69689:CDS 35.0%
! ATAGGCTCTTCAAAAAGCAT+GGG + chr8.3:37005711-37005730 MS.gene69689:intron 35.0%
! GGAACCAATAGAACAGATTT+TGG - chr8.3:37005754-37005773 None:intergenic 35.0%
! TACGTGACTTGTGTAAACAT+AGG + chr8.3:37007577-37007596 MS.gene69689:intron 35.0%
! TGCGATTCTGTTCGAATTTT+TGG + chr8.3:37006408-37006427 MS.gene69689:CDS 35.0%
! TGTAGTCACGAAAGTGATTT+TGG + chr8.3:37007741-37007760 MS.gene69689:CDS 35.0%
! TTGTAGTCCCACTTACATTT+TGG - chr8.3:37008615-37008634 None:intergenic 35.0%
! TTTACTCGGTTTGCTTATAG+TGG + chr8.3:37005359-37005378 MS.gene69689:CDS 35.0%
!! GTTGATTTGGAGAAACAAGA+TGG + chr8.3:37008703-37008722 MS.gene69689:CDS 35.0%
!! TAGGGTTTTGACAGACTTTA+AGG - chr8.3:37008018-37008037 None:intergenic 35.0%
!! TCTGTTCTATTGGTTCCTAA+AGG + chr8.3:37005757-37005776 MS.gene69689:CDS 35.0%
!! TTGAAGAAAGCTGTTTTCCA+AGG + chr8.3:37006013-37006032 MS.gene69689:CDS 35.0%
!! TTTTACAGCATTGGAAGTCT+TGG + chr8.3:37007700-37007719 MS.gene69689:intron 35.0%
!!! AAGAGAATTTTTTGTGGACC+GGG + chr8.3:37006888-37006907 MS.gene69689:CDS 35.0%
!!! ATGTGTTGATTTTGAGTACC+TGG - chr8.3:37008395-37008414 None:intergenic 35.0%
!!! GAAGAGAATTTTTTGTGGAC+CGG + chr8.3:37006887-37006906 MS.gene69689:CDS 35.0%
!!! TCGAATTTTTGGAGTGAAAG+TGG + chr8.3:37006419-37006438 MS.gene69689:CDS 35.0%
!!! TTTTTTGTGTATGCATCACC+TGG - chr8.3:37005843-37005862 None:intergenic 35.0%
ACATATTGCCATTCAGCTCA+AGG + chr8.3:37008736-37008755 MS.gene69689:CDS 40.0%
ATCCAAATCCTTGAGCTGAA+TGG - chr8.3:37008747-37008766 None:intergenic 40.0%
ATGATGTGCGACAACAACTT+TGG + chr8.3:37005402-37005421 MS.gene69689:CDS 40.0%
ATGTAACTCACGTTATTGCG+AGG - chr8.3:37007935-37007954 None:intergenic 40.0%
CAAGACTGCAAAATTGGAAC+AGG + chr8.3:37006507-37006526 MS.gene69689:CDS 40.0%
CATAATCTTCCTCTGTGTCA+AGG - chr8.3:37005449-37005468 None:intergenic 40.0%
CATCATAGAAATCCTCACAC+CGG - chr8.3:37007960-37007979 None:intergenic 40.0%
GCAGTCAAATTTAATGGCCT+TGG - chr8.3:37008644-37008663 None:intergenic 40.0%
GCATCAACTTCATGTGAGTT+TGG - chr8.3:37007477-37007496 None:intergenic 40.0%
TCAGCTCAAGGATTTGGATA+TGG + chr8.3:37008748-37008767 MS.gene69689:CDS 40.0%
TGACACAGAGGAAGATTATG+AGG + chr8.3:37005449-37005468 MS.gene69689:CDS 40.0%
TGGAGAAACTGATGATACTG+AGG + chr8.3:37005560-37005579 MS.gene69689:CDS 40.0%
TTATCTCCAAAGCTGATGAC+TGG - chr8.3:37008579-37008598 None:intergenic 40.0%
TTTCTTCCAGTCATCAGCTT+TGG + chr8.3:37008570-37008589 MS.gene69689:intron 40.0%
TTTGTTCATGTCATGTAGGG+AGG + chr8.3:37008261-37008280 MS.gene69689:intron 40.0%
! AACTTTTACCGAAATCACGG+TGG + chr8.3:37006616-37006635 MS.gene69689:intron 40.0%
! AATGCATCTGTTGGCTATTC+TGG - chr8.3:37006374-37006393 None:intergenic 40.0%
! CTGTTCCAATTTTGCAGTCT+TGG - chr8.3:37006509-37006528 None:intergenic 40.0%
! GAATTAAGGCATTCAGCTGA+AGG - chr8.3:37008784-37008803 None:intergenic 40.0%
! TAGGCTCTTCAAAAAGCATG+GGG + chr8.3:37005712-37005731 MS.gene69689:intron 40.0%
! TGGATACAGCACTTCTAAAG+GGG + chr8.3:37007761-37007780 MS.gene69689:CDS 40.0%
! TTTTTCTCACAGCCTTGCAA+AGG + chr8.3:37006199-37006218 MS.gene69689:intron 40.0%
!! AGGTGCTGGATATGTTAAAG+GGG + chr8.3:37008281-37008300 MS.gene69689:CDS 40.0%
!! GAGGTGCTGGATATGTTAAA+GGG + chr8.3:37008280-37008299 MS.gene69689:CDS 40.0%
!!! AGTTTTGGATCCCAGTTCTT+AGG - chr8.3:37005965-37005984 None:intergenic 40.0%
ACTCAACAACCTTGACACAG+AGG + chr8.3:37005437-37005456 MS.gene69689:CDS 45.0%
ATAGTGGCGAATGGAGTTTC+AGG + chr8.3:37005375-37005394 MS.gene69689:CDS 45.0%
ATCCAAAACTTCCACGCGTT+TGG + chr8.3:37005975-37005994 MS.gene69689:CDS 45.0%
CAACCAGTGTTCCATCAATC+TGG - chr8.3:37005931-37005950 None:intergenic 45.0%
CGGTGTGAGGATTTCTATGA+TGG + chr8.3:37007958-37007977 MS.gene69689:intron 45.0%
CTAAGGACTAAGTTGCTGCA+TGG - chr8.3:37008679-37008698 None:intergenic 45.0%
GGTACGCTTTCAGAATGTGA+GGG + chr8.3:37008302-37008321 MS.gene69689:CDS 45.0%
TAGGTTCATGGGGTTCACTA+GGG - chr8.3:37008036-37008055 None:intergenic 45.0%
TCCAACCTCATGTCAAAACC+AGG + chr8.3:37008374-37008393 MS.gene69689:CDS 45.0%
TCCCAGTTCTTAGGATCTTC+CGG - chr8.3:37005956-37005975 None:intergenic 45.0%
TCCGGAAGATCCTAAGAACT+GGG + chr8.3:37005952-37005971 MS.gene69689:CDS 45.0%
TCTCCAGATTGATGGAACAC+TGG + chr8.3:37005925-37005944 MS.gene69689:intron 45.0%
TCTGAAGGGTGATTCATTGC+AGG + chr8.3:37006299-37006318 MS.gene69689:intron 45.0%
TGAGTTACATTACCGGTGTG+AGG + chr8.3:37007945-37007964 MS.gene69689:intron 45.0%
TGATACCTGATTCCATGTCC+CGG - chr8.3:37006909-37006928 None:intergenic 45.0%
TGCCATTCAGCTCAAGGATT+TGG + chr8.3:37008742-37008761 MS.gene69689:CDS 45.0%
TGGGACTACAAATAGTGCCA+AGG + chr8.3:37008624-37008643 MS.gene69689:CDS 45.0%
TTAGGTTCATGGGGTTCACT+AGG - chr8.3:37008037-37008056 None:intergenic 45.0%
TTGACGGCTCAGGAAGTAAA+TGG + chr8.3:37006047-37006066 MS.gene69689:CDS 45.0%
! CTTCTAAAGGGGACTACCAA+TGG + chr8.3:37007772-37007791 MS.gene69689:CDS 45.0%
! GGTTTGCTTATAGTGGCGAA+TGG + chr8.3:37005366-37005385 MS.gene69689:CDS 45.0%
!! AAAGCTGTTTTCCAAGGCTC+TGG + chr8.3:37006019-37006038 MS.gene69689:CDS 45.0%
!! ATAGATAGCTTTGGTGCTGC+AGG + chr8.3:37005534-37005553 MS.gene69689:CDS 45.0%
!! CAAGGCTCTGGAGTTATTGA+CGG + chr8.3:37006031-37006050 MS.gene69689:CDS 45.0%
!! CTCACATGAAGTTGATGCCA+CGG + chr8.3:37007479-37007498 MS.gene69689:intron 45.0%
!! GGAGGTGCTGGATATGTTAA+AGG + chr8.3:37008279-37008298 MS.gene69689:CDS 45.0%
!!! ACCTGGTTTTGACATGAGGT+TGG - chr8.3:37008378-37008397 None:intergenic 45.0%
!!! ATTTTTTGTGGACCGGGACA+TGG + chr8.3:37006894-37006913 MS.gene69689:CDS 45.0%
!!! GAGTACCTGGTTTTGACATG+AGG - chr8.3:37008382-37008401 None:intergenic 45.0%
AAAAGTGGGAACCACAACCG+TGG - chr8.3:37007499-37007518 None:intergenic 50.0%
ACAGTGTGCCACCGTGATTT+CGG - chr8.3:37006627-37006646 None:intergenic 50.0%
ACGCTTTCAGAATGTGAGGG+TGG + chr8.3:37008305-37008324 MS.gene69689:CDS 50.0%
ACGGCTCAGGAAGTAAATGG+TGG + chr8.3:37006050-37006069 MS.gene69689:CDS 50.0%
CGGCTCAGGAAGTAAATGGT+GGG + chr8.3:37006051-37006070 MS.gene69689:CDS 50.0%
CGTCAATAACTCCAGAGCCT+TGG - chr8.3:37006033-37006052 None:intergenic 50.0%
CTCCGGAAGATCCTAAGAAC+TGG + chr8.3:37005951-37005970 MS.gene69689:CDS 50.0%
GAAAAATCGAGCCAAACGCG+TGG - chr8.3:37005989-37006008 None:intergenic 50.0%
GGGTACGCTTTCAGAATGTG+AGG + chr8.3:37008301-37008320 MS.gene69689:CDS 50.0%
! ACAAGGTAACGGCGTCCTTT+AGG - chr8.3:37005775-37005794 None:intergenic 50.0%
! AGCCAAACGCGTGGAAGTTT+TGG - chr8.3:37005980-37005999 None:intergenic 50.0%
! TCTGGAGTTATTGACGGCTC+AGG + chr8.3:37006037-37006056 MS.gene69689:CDS 50.0%
! TGATGGAACACTGGTTGCTC+CGG + chr8.3:37005934-37005953 MS.gene69689:CDS 50.0%
!! AGCTTTGGTGCTGCAGGAAA+TGG + chr8.3:37005540-37005559 MS.gene69689:CDS 50.0%
!! TGAAGTTGATGCCACGGTTG+TGG + chr8.3:37007485-37007504 MS.gene69689:intron 50.0%
ACCGTTGGTGCACCTTTGCA+AGG - chr8.3:37006214-37006233 None:intergenic 55.0%
CCTTCATGGACAAGCGAACG+CGG + chr8.3:37005492-37005511 MS.gene69689:CDS 55.0%
GGAGACAGCCCAAACACTGA+TGG + chr8.3:37006450-37006469 MS.gene69689:CDS 55.0%
GGAGTGAAAGTGGCTTCACC+AGG + chr8.3:37006429-37006448 MS.gene69689:CDS 55.0%
TCAGTGTTTGGGCTGTCTCC+TGG - chr8.3:37006450-37006469 None:intergenic 55.0%
! CATGTCATGTAGGGAGGTGC+TGG + chr8.3:37008267-37008286 MS.gene69689:intron 55.0%
! GCCTTGCAAAGGTGCACCAA+CGG + chr8.3:37006210-37006229 MS.gene69689:intron 55.0%
CCGCGTTCGCTTGTCCATGA+AGG - chr8.3:37005495-37005514 None:intergenic 60.0%
GTGGACCGGGACATGGAATC+AGG + chr8.3:37006901-37006920 MS.gene69689:CDS 60.0%
TCATGGACAAGCGAACGCGG+CGG + chr8.3:37005495-37005514 MS.gene69689:CDS 60.0%


Chromosome Type Strat End Strand Name
chr8.3 gene 37005336 37008885 37005336 ID=MS.gene69689
chr8.3 mRNA 37005336 37008885 37005336 ID=MS.gene69689.t1;Parent=MS.gene69689
chr8.3 exon 37005336 37005581 37005336 ID=MS.gene69689.t1.exon1;Parent=MS.gene69689.t1
chr8.3 CDS 37005336 37005581 37005336 ID=cds.MS.gene69689.t1;Parent=MS.gene69689.t1
chr8.3 exon 37005715 37005843 37005715 ID=MS.gene69689.t1.exon2;Parent=MS.gene69689.t1
chr8.3 CDS 37005715 37005843 37005715 ID=cds.MS.gene69689.t1;Parent=MS.gene69689.t1
chr8.3 exon 37005932 37006102 37005932 ID=MS.gene69689.t1.exon3;Parent=MS.gene69689.t1
chr8.3 CDS 37005932 37006102 37005932 ID=cds.MS.gene69689.t1;Parent=MS.gene69689.t1
chr8.3 exon 37006211 37006231 37006211 ID=MS.gene69689.t1.exon4;Parent=MS.gene69689.t1
chr8.3 CDS 37006211 37006231 37006211 ID=cds.MS.gene69689.t1;Parent=MS.gene69689.t1
chr8.3 exon 37006321 37006528 37006321 ID=MS.gene69689.t1.exon5;Parent=MS.gene69689.t1
chr8.3 CDS 37006321 37006528 37006321 ID=cds.MS.gene69689.t1;Parent=MS.gene69689.t1
chr8.3 exon 37006841 37006922 37006841 ID=MS.gene69689.t1.exon6;Parent=MS.gene69689.t1
chr8.3 CDS 37006841 37006922 37006841 ID=cds.MS.gene69689.t1;Parent=MS.gene69689.t1
chr8.3 exon 37007708 37007816 37007708 ID=MS.gene69689.t1.exon7;Parent=MS.gene69689.t1
chr8.3 CDS 37007708 37007816 37007708 ID=cds.MS.gene69689.t1;Parent=MS.gene69689.t1
chr8.3 exon 37008279 37008395 37008279 ID=MS.gene69689.t1.exon8;Parent=MS.gene69689.t1
chr8.3 CDS 37008279 37008395 37008279 ID=cds.MS.gene69689.t1;Parent=MS.gene69689.t1
chr8.3 exon 37008580 37008885 37008580 ID=MS.gene69689.t1.exon9;Parent=MS.gene69689.t1
chr8.3 CDS 37008580 37008885 37008580 ID=cds.MS.gene69689.t1;Parent=MS.gene69689.t1
Gene Sequence

>MS.gene69689

ATGGACAGATTCTTCTTGGTTTCTTTACTCGGTTTGCTTATAGTGGCGAATGGAGTTTCAGGAAGCATGATGTGCGACAACAACTTTGGCATGCTTGAAGAACTCAACAACCTTGACACAGAGGAAGATTATGAGGTAGAAGAACTTTCTGACATACCTTCATGGACAAGCGAACGCGGCGGAAAAGTTCTTGTGAATATAGATAGCTTTGGTGCTGCAGGAAATGGAGAAACTGATGATACTGAGGTAAAGTTCTTTCATTATTTGCAAATTCGTCCTATTTTTTTCTATGTTCAACATGCACTTTACACATTCAAGGTTGTTGAACATATGCAACTGTTATATTTTTTTTTCTGTATTGATCAATTCTTATTTATAGGCTCTTCAAAAAGCATGGGGAGTTGCTTGTTCTACACCAAAATCTGTTCTATTGGTTCCTAAAGGACGCCGTTACCTTGTTAATGCAACGAAATTCATAGGGCCTTGTAAAGACAATCTAATCATCCAGGTGATGCATACACAAAAAAGTCATTTAGTTTTATCAGCGACTCATCATTACAATTACAATTACTGACATGGTATTTGCATTTCTCCAGATTGATGGAACACTGGTTGCTCCGGAAGATCCTAAGAACTGGGATCCAAAACTTCCACGCGTTTGGCTCGATTTTTCTAAATTGAAGAAAGCTGTTTTCCAAGGCTCTGGAGTTATTGACGGCTCAGGAAGTAAATGGTGGGCAGCATCTTGCAAAAAGAACAAGACTAATGTAAAATTTTCAGAATATTTGGCTTTGTTATCTTACAAATATTTAAAAATAAACTTATATTGCAGGCAATAATAATTTTCTGTTTTTGTTTTTTTCTTTTTCTCACAGCCTTGCAAAGGTGCACCAACGGTAAGAACAACTTTCTTACACCATTGTTGTATTCTATATTTTAAGCACAAAAAAATGTAGTTTTAACTCTGAAGGGTGATTCATTGCAGGCACTAACCATCGATACAAGTTCATCTATAAAGGTTAAAGGACTAACTATCCAGAATAGCCAACAGATGCATTTTACGATATCACGATGCGATTCTGTTCGAATTTTTGGAGTGAAAGTGGCTTCACCAGGAGACAGCCCAAACACTGATGGAATTCATATTAGTGAATCAACAAATGTCATTGTCCAAGACTGCAAAATTGGAACAGGTTCTGAACTTAGAATCAACATGTTTATGATTGAGTCGTGCGGTCCTTATTAAATGTATGCTTCTTCTAATCACAGTTGCACCGTATAACTTTTACCGAAATCACGGTGGCACACTGTGCTTATGTCATGTCAATCCAAACATGCAACTAGAATTTAATTAAAAGTGATTAAATTAACTTATGTTATGTTGAAATTTTACATTCAAATTTTCTTTCAAAGTATAAACATATCAAAACAATTTATAATTTTCATTTAAAATCACATAAAATGGTCACACAAACCACATTGACTAACTGTGCTATATTATTCAGGGGATGATTGCATTTCAATTGTGAATGCTAGTTCAAATATCAAAATGAAGAGAATTTTTTGTGGACCGGGACATGGAATCAGGTATCATCAAATCTTCATCCCCCAATTTAGTTCAAAATCAATGTTAATACTTGTTTGTTACGTTTAAAATTAGAGTGCTTATGGAATGGTTGCACAAAGATTTTCTAATAGCCACTCATGAAACTTTTGTGTCTGAACTCTTTGTAATACTATCTACTTTTATGTCAGTTGTAATAATGTAAATTGACACCTTCTGTAAAAAAATTAAAAAGATAAAAGTGATATTAAAATCATAAATTAATTTTTTACTCTTATTTGACATATATTCGCCAAGTATTTACTAGTAAAATCATTTTTACCTCTGAAATTCAAATAACTAAAATGATGTAAAGTAGATTTTGTTCCAAGTTAAAATGATGAAAATAGTTTAGCTTTATTTTATCTTTTGTTATAGAAATAGTTCATCAATAAATACTTATATAATAAGTGCTTATACTATAAGTGCTTTATTAAGCTGTATATACAATTAGACTAAAAGCATTCAAGCACAACTAACTTTACTTCAAAGTTTTTAACTTAAATTTAATCAAATTAAACATATTCAGGCAACCCCAAACTCACATGAAGTTGATGCCACGGTTGTGGTTCCCACTTTTTTTATCTTTCTAGAAGAGTTAGTTACAGGAACCACACACATAACATTATTTTAATGGTTACGTGACTTGTGTAAACATAGGATATCAAACTCAAAGATAAAAATAAATTTATATTGTACTGGAAAGTGGAAACCATATTAGGTAAAGTAGTTATTTTCTTTCTTTAACACTACTTTTTTTTTTTTACAGCATTGGAAGTCTTGGTAAAGATAACTCAACTGGTGTAGTCACGAAAGTGATTTTGGATACAGCACTTCTAAAGGGGACTACCAATGGTCTTAGAATTAAGACTTGGCAGGTAGAATTTTTTATTTCTATCTTGATTAAATTTTGCTAAATATTTATTATGTAGTATTGTTAATTAATTAATTTAACAATGAAGATTGACTCAATTGATAAAGAGCTTAATCATACCTCGCAATAACGTGAGTTACATTACCGGTGTGAGGATTTCTATGATGGAGAATTTGTAAATACTTTGTTAGCGTTCTCTGAGCCTTAAAGTCTGTCAAAACCCTAGTGAACCCCATGAACCTAACTAACATAAACTTTATTCTATAAAAAACAATATCATTAATTAGTTTAACTATGAGTTTAGTGGATATACACATAGAGTGAAAGAGAAAATTATATCGCATTTAATTGAACATTTTATAATTTAGAATTATTTTTCACTTACATTTCAGAACTATGGGAATTGATGAATTTGAAAATGACAAATAATGCTTTCTCTCTATCTTGTTTTGTTCATGTCATGTAGGGAGGTGCTGGATATGTTAAAGGGGTACGCTTTCAGAATGTGAGGGTGGAAAATGTATCAAACCCCATTCTTATAGATCAATTTTACTGTGATTCTCCAACCTCATGTCAAAACCAGGTACTCAAAATCAACACATCATTTTAAAGATTTGAGTTCTTTAATGTTTCATTTTTTTTTAATGATGTTTAAATTATTATTGTATATACTTGATTAATTAATTATGGTTTTGATACTTTTCCAATCAAGCAAATTTTATCCTACATTAATATTTAACTTGTATGATTTTTTTTTTTTCTTCCAGTCATCAGCTTTGGAGATAAGTGAGATAATGTACCAAAATGTAAGTGGGACTACAAATAGTGCCAAGGCCATTAAATTTGACTGCAGTGACACTGTTCCATGCAGCAACTTAGTCCTTAGCAATGTTGATTTGGAGAAACAAGATGGCACAGTTGAAACATATTGCCATTCAGCTCAAGGATTTGGATATGGTGTTGTTCATCCTTCAGCTGAATGCCTTAATTCCAGTGATAAAACTTCTCAAGATGATGAATCTCAATCTATTATTTCTGAAGATGATGATTATACCCGTCACACAGAACTATAG
Protein sequence

>MS.gene69689.t1

MDRFFLVSLLGLLIVANGVSGSMMCDNNFGMLEELNNLDTEEDYEVEELSDIPSWTSERGGKVLVNIDSFGAAGNGETDDTEALQKAWGVACSTPKSVLLVPKGRRYLVNATKFIGPCKDNLIIQIDGTLVAPEDPKNWDPKLPRVWLDFSKLKKAVFQGSGVIDGSGSKWWAASCKKNKTNPCKGAPTALTIDTSSSIKVKGLTIQNSQQMHFTISRCDSVRIFGVKVASPGDSPNTDGIHISESTNVIVQDCKIGTGDDCISIVNASSNIKMKRIFCGPGHGISIGSLGKDNSTGVVTKVILDTALLKGTTNGLRIKTWQGGAGYVKGVRFQNVRVENVSNPILIDQFYCDSPTSCQNQSSALEISEIMYQNVSGTTNSAKAIKFDCSDTVPCSNLVLSNVDLEKQDGTVETYCHSAQGFGYGVVHPSAECLNSSDKTSQDDESQSIISEDDDYTRHTEL