Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69767.t1 | XP_013461155.1 | 95.8 | 355 | 13 | 1 | 1 | 353 | 1 | 355 | 6.50E-184 | 653.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69767.t1 | Q5EAE0 | 35.7 | 375 | 202 | 5 | 7 | 348 | 7 | 375 | 1.4e-57 | 224.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69767.t1 | A0A072UZF4 | 95.8 | 355 | 13 | 1 | 1 | 353 | 1 | 355 | 4.7e-184 | 653.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene69767 | MS.gene010234 | PPI |
| MS.gene69767 | MS.gene063045 | PPI |
| MS.gene69767 | MS.gene89501 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69767.t1 | MTR_3g081480 | 98.592 | 355 | 3 | 1 | 1 | 353 | 1 | 355 | 0.0 | 723 |
| MS.gene69767.t1 | MTR_5g062720 | 36.074 | 377 | 200 | 5 | 7 | 348 | 8 | 378 | 5.40e-76 | 239 |
| MS.gene69767.t1 | MTR_4g094255 | 35.616 | 365 | 200 | 8 | 7 | 340 | 8 | 368 | 2.02e-71 | 227 |
| MS.gene69767.t1 | MTR_5g062720 | 32.781 | 302 | 162 | 5 | 7 | 273 | 8 | 303 | 4.79e-48 | 164 |
| MS.gene69767.t1 | MTR_4g094255 | 34.629 | 283 | 150 | 8 | 89 | 340 | 1 | 279 | 5.88e-45 | 156 |
| MS.gene69767.t1 | MTR_4g080800 | 32.243 | 214 | 105 | 8 | 159 | 348 | 273 | 470 | 2.54e-17 | 83.2 |
| MS.gene69767.t1 | MTR_2g083260 | 31.925 | 213 | 111 | 9 | 162 | 353 | 279 | 478 | 6.56e-16 | 79.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69767.t1 | AT3G22290 | 80.791 | 354 | 65 | 3 | 1 | 352 | 1 | 353 | 0.0 | 604 |
| MS.gene69767.t1 | AT3G22290 | 80.791 | 354 | 65 | 3 | 1 | 352 | 1 | 353 | 0.0 | 604 |
| MS.gene69767.t1 | AT1G36050 | 35.450 | 378 | 211 | 6 | 2 | 348 | 3 | 378 | 2.02e-73 | 233 |
| MS.gene69767.t1 | AT1G22200 | 34.121 | 381 | 214 | 6 | 1 | 348 | 2 | 378 | 1.09e-72 | 231 |
| MS.gene69767.t1 | AT1G36050 | 35.450 | 378 | 211 | 6 | 2 | 348 | 3 | 378 | 2.25e-72 | 233 |
| MS.gene69767.t1 | AT1G22200 | 33.333 | 339 | 189 | 6 | 1 | 306 | 2 | 336 | 2.58e-58 | 192 |
| MS.gene69767.t1 | AT4G27080 | 29.839 | 248 | 133 | 10 | 121 | 340 | 231 | 465 | 4.92e-20 | 91.3 |
| MS.gene69767.t1 | AT4G27080 | 29.839 | 248 | 133 | 10 | 121 | 340 | 283 | 517 | 6.40e-20 | 91.3 |
| MS.gene69767.t1 | AT3G20560 | 30.651 | 261 | 143 | 11 | 121 | 353 | 231 | 481 | 7.90e-19 | 87.8 |
| MS.gene69767.t1 | AT1G50950 | 30.415 | 217 | 121 | 8 | 152 | 348 | 271 | 477 | 5.13e-17 | 82.4 |
| MS.gene69767.t1 | AT1G50950 | 30.415 | 217 | 121 | 8 | 152 | 348 | 276 | 482 | 5.60e-17 | 82.4 |
Find 69 sgRNAs with CRISPR-Local
Find 391 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTAATTCTGTTGCAGGTTTA+TGG | 0.190697 | 3.4:+77373947 | MS.gene69767:intron |
| GTTATGAATTCCTGGATATT+TGG | 0.195825 | 3.4:-77374531 | None:intergenic |
| TTATGAATTCCTGGATATTT+GGG | 0.205707 | 3.4:-77374530 | None:intergenic |
| AACAGTTATGGACAGATAAT+TGG | 0.226761 | 3.4:+77371939 | MS.gene69767:CDS |
| GATCATTGGTTTGATTATAA+TGG | 0.293746 | 3.4:+77369473 | MS.gene69767:CDS |
| GTTATCCATGATTTGTCATT+TGG | 0.304688 | 3.4:+77374506 | MS.gene69767:CDS |
| TGCCTCCTTCACCTTCTTGA+TGG | 0.309665 | 3.4:-77373822 | None:intergenic |
| AATGTCATATTTATATGAAT+TGG | 0.314883 | 3.4:-77370286 | None:intergenic |
| TTAGCCCATGCACTGAAATA+TGG | 0.324151 | 3.4:-77374003 | None:intergenic |
| CAGCTTCGTTTGAACAGTTA+TGG | 0.327126 | 3.4:+77371927 | MS.gene69767:intron |
| TTGATTGCAGTTTCGATCAT+TGG | 0.357208 | 3.4:+77369459 | MS.gene69767:intron |
| CGATCAAATTGACTAGTAAT+GGG | 0.358497 | 3.4:-77374773 | None:intergenic |
| TTAGATGTTCAAAGGGTTGC+TGG | 0.373432 | 3.4:+77373974 | MS.gene69767:CDS |
| GGTGGAACCTTTGCTGTAAC+AGG | 0.373701 | 3.4:+77374998 | MS.gene69767:CDS |
| TATATCTGATCTTGTTGAAA+AGG | 0.380648 | 3.4:+77371971 | MS.gene69767:CDS |
| TCAAGTGGGTTATGAATTCC+TGG | 0.392656 | 3.4:-77374539 | None:intergenic |
| TCCTTGATAGTGACAGTAAT+AGG | 0.399502 | 3.4:-77374926 | None:intergenic |
| CCGATCAAATTGACTAGTAA+TGG | 0.408677 | 3.4:-77374774 | None:intergenic |
| AAACATATATGTTGCACAAA+TGG | 0.412036 | 3.4:+77374024 | MS.gene69767:CDS |
| TACAACTTACACTGTTCATC+AGG | 0.414564 | 3.4:+77369530 | MS.gene69767:CDS |
| TACGTTGTTTCTGCACGAGT+TGG | 0.429726 | 3.4:+77369497 | MS.gene69767:CDS |
| CACCTAGCACGGCACAAAGC+CGG | 0.441915 | 3.4:-77374979 | None:intergenic |
| TTCCCTTCTTTACCTTGTGA+TGG | 0.448996 | 3.4:+77370307 | MS.gene69767:CDS |
| AAAACTCAATCTGGTGCTCT+TGG | 0.451292 | 3.4:+77369321 | MS.gene69767:CDS |
| GAGATATATCTATATTCAGT+TGG | 0.453984 | 3.4:-77374701 | None:intergenic |
| CAATTTGATCGGACATGGCC+AGG | 0.454262 | 3.4:+77374785 | MS.gene69767:CDS |
| TCATTTGGCCCCAAATATCC+AGG | 0.465213 | 3.4:+77374521 | MS.gene69767:CDS |
| AATTTCCATATTTCAGTGCA+TGG | 0.466918 | 3.4:+77373998 | MS.gene69767:CDS |
| TTGTTGCAGAAAACTCAATC+TGG | 0.467399 | 3.4:+77369312 | MS.gene69767:CDS |
| ACCTAGCACGGCACAAAGCC+GGG | 0.468081 | 3.4:-77374978 | None:intergenic |
| TGGATCTTGATACAAACATA+TGG | 0.471383 | 3.4:+77370501 | MS.gene69767:CDS |
| ACGTTGTTTCTGCACGAGTT+GGG | 0.475844 | 3.4:+77369498 | MS.gene69767:CDS |
| ATATCTGATCTTGTTGAAAA+GGG | 0.476430 | 3.4:+77371972 | MS.gene69767:CDS |
| TGGGGCCAAATGACAAATCA+TGG | 0.487288 | 3.4:-77374511 | None:intergenic |
| GCCTATTACTGTCACTATCA+AGG | 0.504629 | 3.4:+77374925 | MS.gene69767:CDS |
| CGGCTTTGTGCCGTGCTAGG+TGG | 0.508099 | 3.4:+77374980 | MS.gene69767:CDS |
| ACCCGGCTTTGTGCCGTGCT+AGG | 0.512689 | 3.4:+77374977 | MS.gene69767:CDS |
| ATTTCCATATTTCAGTGCAT+GGG | 0.517261 | 3.4:+77373999 | MS.gene69767:CDS |
| TAACCATCACAAGGTAAAGA+AGG | 0.521720 | 3.4:-77370310 | None:intergenic |
| ATTTACATCAACAGGCATGC+TGG | 0.524484 | 3.4:+77375533 | MS.gene69767:intron |
| GTGGATGCCATTGATATGTC+TGG | 0.530136 | 3.4:+77370467 | MS.gene69767:CDS |
| CTAGTCAATTTGATCGGACA+TGG | 0.531079 | 3.4:+77374780 | MS.gene69767:CDS |
| CAACAGGCATGCTGGACCGT+TGG | 0.533592 | 3.4:+77375541 | MS.gene69767:intron |
| ATCCTTGATGTCTCATCAAG+TGG | 0.543339 | 3.4:-77374554 | None:intergenic |
| AAAATTACCTGTTACAGCAA+AGG | 0.551485 | 3.4:-77375005 | None:intergenic |
| AGCAAAGGTTCCACCTAGCA+CGG | 0.569794 | 3.4:-77374990 | None:intergenic |
| CCATTACTAGTCAATTTGAT+CGG | 0.571487 | 3.4:+77374774 | MS.gene69767:CDS |
| AACCATCACAAGGTAAAGAA+GGG | 0.577515 | 3.4:-77370309 | None:intergenic |
| TTTCTCCAGATCTTCGACGC+GGG | 0.580987 | 3.4:+77374461 | MS.gene69767:intron |
| ATGTTTGCCAGACATATCAA+TGG | 0.583808 | 3.4:-77370474 | None:intergenic |
| CACTGAAAATACCATCAAGA+AGG | 0.590106 | 3.4:+77373811 | MS.gene69767:CDS |
| TACCATCAAGAAGGTGAAGG+AGG | 0.599854 | 3.4:+77373820 | MS.gene69767:CDS |
| ACCCACTTGATGAGACATCA+AGG | 0.600922 | 3.4:+77374552 | MS.gene69767:CDS |
| GATCAAATTGACTAGTAATG+GGG | 0.602587 | 3.4:-77374772 | None:intergenic |
| AAATACCATCAAGAAGGTGA+AGG | 0.608112 | 3.4:+77373817 | MS.gene69767:CDS |
| TCCTTGATGTCTCATCAAGT+GGG | 0.612215 | 3.4:-77374553 | None:intergenic |
| ATCAAATTGACTAGTAATGG+GGG | 0.614743 | 3.4:-77374771 | None:intergenic |
| GTAACTGAGAACTGATTAGT+CGG | 0.619257 | 3.4:-77374737 | None:intergenic |
| AGGATTCTGCATGATGCGAG+TGG | 0.621286 | 3.4:+77374572 | MS.gene69767:CDS |
| TATGAATTCCTGGATATTTG+GGG | 0.621776 | 3.4:-77374529 | None:intergenic |
| CAACGAGTCTGTACATCCAA+CGG | 0.621907 | 3.4:-77375557 | None:intergenic |
| AACAAATGATCCTCTGTGCG+AGG | 0.627162 | 3.4:-77369294 | None:intergenic |
| TAATAAAATGAAGAAAACTA+CGG | 0.637932 | 3.4:-77374955 | None:intergenic |
| GATCATAACACACACAAGCA+TGG | 0.641030 | 3.4:+77372005 | MS.gene69767:CDS |
| TATGTCTGGCAAACATGAGG+TGG | 0.662844 | 3.4:+77370481 | MS.gene69767:CDS |
| ATGTCTGTAGACTTGAAGCG+TGG | 0.684678 | 3.4:+77370253 | MS.gene69767:CDS |
| TGCCTGTGCTAACCATCACA+AGG | 0.685746 | 3.4:-77370319 | None:intergenic |
| TGATATGTCTGGCAAACATG+AGG | 0.701769 | 3.4:+77370478 | MS.gene69767:CDS |
| CGATGCATTTCCTCGCACAG+AGG | 0.733486 | 3.4:+77369284 | MS.gene69767:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTTTATTTAATTT+TGG | + | chr3.4:77369598-77369617 | MS.gene69767:intron | 0.0% |
| !! | ATCTTTAATATAATAAGATA+TGG | - | chr3.4:77370918-77370937 | None:intergenic | 10.0% |
| !!! | AACTTTTAAATACTATATAA+AGG | + | chr3.4:77374595-77374614 | MS.gene69767:CDS | 10.0% |
| !!! | TTTTTGTTTAATAAATTTCT+GGG | + | chr3.4:77372633-77372652 | MS.gene69767:intron | 10.0% |
| !! | AACAAAAAATCTAAACTTTA+AGG | - | chr3.4:77369383-77369402 | None:intergenic | 15.0% |
| !! | AATGTCATATTTATATGAAT+TGG | - | chr3.4:77370289-77370308 | None:intergenic | 15.0% |
| !! | ATATTAAGTTTCTTTCAAAT+TGG | - | chr3.4:77373922-77373941 | None:intergenic | 15.0% |
| !! | ATTACTTATTTAAACACAAA+CGG | - | chr3.4:77372183-77372202 | None:intergenic | 15.0% |
| !! | TAAAAGTTAAATTTAACATC+AGG | + | chr3.4:77372451-77372470 | MS.gene69767:intron | 15.0% |
| !! | TAAATAGTTTCTTAATATGT+TGG | + | chr3.4:77370604-77370623 | MS.gene69767:intron | 15.0% |
| !! | TAATAAAATGAAGAAAACTA+CGG | - | chr3.4:77374958-77374977 | None:intergenic | 15.0% |
| !! | TATAATAAAAAACATTTGAC+TGG | + | chr3.4:77375138-77375157 | MS.gene69767:intron | 15.0% |
| !! | TTCATTATATACATAAACTT+CGG | + | chr3.4:77371396-77371415 | MS.gene69767:intron | 15.0% |
| !! | TTTGATATGTTGATATTATT+TGG | + | chr3.4:77370128-77370147 | MS.gene69767:intron | 15.0% |
| !!! | ATTCATAATTTAAAACATGA+AGG | - | chr3.4:77374405-77374424 | None:intergenic | 15.0% |
| !!! | CTTTTTGTTTAATAAATTTC+TGG | + | chr3.4:77372632-77372651 | MS.gene69767:intron | 15.0% |
| !!! | GTTATTAAATATTGATTTTC+TGG | + | chr3.4:77375436-77375455 | MS.gene69767:intron | 15.0% |
| !!! | TCTTATTAAAGTTATTTCTT+TGG | - | chr3.4:77374329-77374348 | None:intergenic | 15.0% |
| !!! | TGTGTATTTTCTATTAAAAT+TGG | - | chr3.4:77372285-77372304 | None:intergenic | 15.0% |
| !!! | TTGTATTTAATTTTGGAATA+AGG | + | chr3.4:77369733-77369752 | MS.gene69767:intron | 15.0% |
| !!! | TTTTGTTTAATAAATTTCTG+GGG | + | chr3.4:77372634-77372653 | MS.gene69767:intron | 15.0% |
| !! | AAAAATAGACATCAATTCAA+AGG | + | chr3.4:77372946-77372965 | MS.gene69767:intron | 20.0% |
| !! | AAAATAGACATCAATTCAAA+GGG | + | chr3.4:77372947-77372966 | MS.gene69767:intron | 20.0% |
| !! | AAATAACCATTAATGATACA+GGG | - | chr3.4:77371883-77371902 | None:intergenic | 20.0% |
| !! | ACATAAAAAGAAATCCAAAA+AGG | - | chr3.4:77370547-77370566 | None:intergenic | 20.0% |
| !! | AGCTTAAAACTATAATCATA+TGG | - | chr3.4:77375062-77375081 | None:intergenic | 20.0% |
| !! | ATAGAGAGAAATTAAATCAT+AGG | - | chr3.4:77373520-77373539 | None:intergenic | 20.0% |
| !! | ATATGCTTATATCACTATAT+TGG | + | chr3.4:77371442-77371461 | MS.gene69767:intron | 20.0% |
| !! | ATTTAGAAAAACATGATTTC+TGG | - | chr3.4:77373592-77373611 | None:intergenic | 20.0% |
| !! | GTATTATAAATAAGTCCATT+CGG | - | chr3.4:77371644-77371663 | None:intergenic | 20.0% |
| !! | TAAATAACCATTAATGATAC+AGG | - | chr3.4:77371884-77371903 | None:intergenic | 20.0% |
| !! | TAACTGCAAATAAGTAAATA+AGG | + | chr3.4:77374254-77374273 | MS.gene69767:intron | 20.0% |
| !! | TTACTTATTTAAACACAAAC+GGG | - | chr3.4:77372182-77372201 | None:intergenic | 20.0% |
| !! | TTACTTATTTGCAGTTATTT+GGG | - | chr3.4:77374251-77374270 | None:intergenic | 20.0% |
| !! | TTTACTTATTTGCAGTTATT+TGG | - | chr3.4:77374252-77374271 | None:intergenic | 20.0% |
| !!! | AATTTCTTCTTTTTAATTCC+GGG | - | chr3.4:77371506-77371525 | None:intergenic | 20.0% |
| !!! | ATATCACTATATTGGTTTTT+GGG | + | chr3.4:77371450-77371469 | MS.gene69767:intron | 20.0% |
| !!! | ATGTTGTTAAAAAGTTTTAG+TGG | + | chr3.4:77371094-77371113 | MS.gene69767:intron | 20.0% |
| !!! | ATTCTTTTATAGTTCTTTTC+TGG | + | chr3.4:77373693-77373712 | MS.gene69767:intron | 20.0% |
| !!! | CAATTTCTTCTTTTTAATTC+CGG | - | chr3.4:77371507-77371526 | None:intergenic | 20.0% |
| !!! | CATTATACATTTATGAGTTT+TGG | + | chr3.4:77374829-77374848 | MS.gene69767:intron | 20.0% |
| !!! | CTAAACTTTAAGGAAAAAAA+TGG | - | chr3.4:77369373-77369392 | None:intergenic | 20.0% |
| !!! | GTTGTTACTTGTTAATTAAT+AGG | + | chr3.4:77371806-77371825 | MS.gene69767:intron | 20.0% |
| !!! | TAGATTCATTTCCTTTTTTT+GGG | + | chr3.4:77372121-77372140 | MS.gene69767:intron | 20.0% |
| !!! | TATATCACTATATTGGTTTT+TGG | + | chr3.4:77371449-77371468 | MS.gene69767:intron | 20.0% |
| !!! | TCTTGAATATTGTTTTAACA+TGG | + | chr3.4:77374636-77374655 | MS.gene69767:intron | 20.0% |
| !!! | TTCTAGGAAAAAATATTTCA+AGG | - | chr3.4:77374141-77374160 | None:intergenic | 20.0% |
| !!! | TTTTTTTCTCCATTTCATTA+GGG | - | chr3.4:77372929-77372948 | None:intergenic | 20.0% |
| !!! | TTTTTTTTCTCCATTTCATT+AGG | - | chr3.4:77372930-77372949 | None:intergenic | 20.0% |
| ! | AAAACCATCACTATCAAATT+AGG | - | chr3.4:77374444-77374463 | None:intergenic | 25.0% |
| ! | AAAATAGACTTAAGATCAGA+AGG | - | chr3.4:77371621-77371640 | None:intergenic | 25.0% |
| ! | AAACATATATGTTGCACAAA+TGG | + | chr3.4:77374024-77374043 | MS.gene69767:CDS | 25.0% |
| ! | AAATAGACTTAAGATCAGAA+GGG | - | chr3.4:77371620-77371639 | None:intergenic | 25.0% |
| ! | AACTGTAGGTTAAAATTACA+TGG | + | chr3.4:77372061-77372080 | MS.gene69767:intron | 25.0% |
| ! | ACGATCTATTATTAAACTAC+AGG | + | chr3.4:77372603-77372622 | MS.gene69767:intron | 25.0% |
| ! | ACTTATGCTAATATACACAT+AGG | - | chr3.4:77370094-77370113 | None:intergenic | 25.0% |
| ! | AGGGATTAAGAATACTAAAA+AGG | - | chr3.4:77371864-77371883 | None:intergenic | 25.0% |
| ! | AGTTAAATTTAACATCAGGT+TGG | + | chr3.4:77372455-77372474 | MS.gene69767:intron | 25.0% |
| ! | ATATCTGATCTTGTTGAAAA+GGG | + | chr3.4:77371972-77371991 | MS.gene69767:CDS | 25.0% |
| ! | ATTTATGAACGTTCTTTGTT+TGG | - | chr3.4:77373411-77373430 | None:intergenic | 25.0% |
| ! | CAAACATACAAATTAACAGA+AGG | - | chr3.4:77371271-77371290 | None:intergenic | 25.0% |
| ! | GAGATATATCTATATTCAGT+TGG | - | chr3.4:77374704-77374723 | None:intergenic | 25.0% |
| ! | GCAAGAAACAAAATAAACTA+AGG | - | chr3.4:77375489-77375508 | None:intergenic | 25.0% |
| ! | GGGATTAAGAATACTAAAAA+GGG | - | chr3.4:77371863-77371882 | None:intergenic | 25.0% |
| ! | TAAAAATTGTCAACAGATGA+TGG | + | chr3.4:77373731-77373750 | MS.gene69767:intron | 25.0% |
| ! | TAGACAAATATTGCTTACTT+TGG | + | chr3.4:77370736-77370755 | MS.gene69767:intron | 25.0% |
| ! | TAGTGATATAAGCATATTGT+AGG | - | chr3.4:77371439-77371458 | None:intergenic | 25.0% |
| ! | TATATCTGATCTTGTTGAAA+AGG | + | chr3.4:77371971-77371990 | MS.gene69767:CDS | 25.0% |
| ! | TCAAAGGGATCTTATATATA+GGG | + | chr3.4:77372962-77372981 | MS.gene69767:intron | 25.0% |
| ! | TGTGTATATTAGCAAAAGTT+GGG | + | chr3.4:77370189-77370208 | MS.gene69767:intron | 25.0% |
| ! | TTAAGCTGTTTATCTAAACA+TGG | - | chr3.4:77369630-77369649 | None:intergenic | 25.0% |
| ! | TTAAGGAAAAAAATGGATCA+GGG | - | chr3.4:77369366-77369385 | None:intergenic | 25.0% |
| ! | TTATGAATTCCTGGATATTT+GGG | - | chr3.4:77374533-77374552 | None:intergenic | 25.0% |
| ! | TTCAAAGGGATCTTATATAT+AGG | + | chr3.4:77372961-77372980 | MS.gene69767:intron | 25.0% |
| ! | TTTAAGGAAAAAAATGGATC+AGG | - | chr3.4:77369367-77369386 | None:intergenic | 25.0% |
| !! | ATTTAGTTTAATTCTGTTGC+AGG | + | chr3.4:77373940-77373959 | MS.gene69767:intron | 25.0% |
| !! | GGATTTCTTTTTATGTGTTT+TGG | + | chr3.4:77370551-77370570 | MS.gene69767:intron | 25.0% |
| !! | GTTTTCTTCATTTTATTACC+CGG | + | chr3.4:77374960-77374979 | MS.gene69767:CDS | 25.0% |
| !! | TATTTAGTGCCTTTTTAGAT+TGG | - | chr3.4:77370021-77370040 | None:intergenic | 25.0% |
| !! | TCAATTATTCTGTTTTCTTC+TGG | + | chr3.4:77371352-77371371 | MS.gene69767:intron | 25.0% |
| !! | TTTTCATAAGTTCTTCAAGA+TGG | - | chr3.4:77369883-77369902 | None:intergenic | 25.0% |
| !!! | AGATTCATTTCCTTTTTTTG+GGG | + | chr3.4:77372122-77372141 | MS.gene69767:intron | 25.0% |
| !!! | AGGAAGAATTTTAATCTGTA+AGG | - | chr3.4:77375465-77375484 | None:intergenic | 25.0% |
| !!! | ATAGTTTTAAGCTATAGCTT+TGG | + | chr3.4:77375069-77375088 | MS.gene69767:intron | 25.0% |
| !!! | CTAAAAAGGCACTAAATAAA+AGG | + | chr3.4:77370023-77370042 | MS.gene69767:intron | 25.0% |
| !!! | CTTTGTTTGGTTCAAAATTT+TGG | - | chr3.4:77373398-77373417 | None:intergenic | 25.0% |
| !!! | CTTTTTTTGGGGATAATAAA+GGG | + | chr3.4:77372133-77372152 | MS.gene69767:intron | 25.0% |
| !!! | GATCATTGGTTTGATTATAA+TGG | + | chr3.4:77369473-77369492 | MS.gene69767:CDS | 25.0% |
| !!! | GTAATTTTAACCTACAGTTT+TGG | - | chr3.4:77372060-77372079 | None:intergenic | 25.0% |
| !!! | GTAGATTCATTTCCTTTTTT+TGG | + | chr3.4:77372120-77372139 | MS.gene69767:intron | 25.0% |
| !!! | GTTATTTACGCTAATTTGTT+TGG | + | chr3.4:77371896-77371915 | MS.gene69767:intron | 25.0% |
| !!! | TAAAAAGTTTTAGTGGAGAA+GGG | + | chr3.4:77371101-77371120 | MS.gene69767:intron | 25.0% |
| !!! | TATTTTTTCCTAGAACTTAC+AGG | + | chr3.4:77374146-77374165 | MS.gene69767:intron | 25.0% |
| !!! | TTAAAAAGTTTTAGTGGAGA+AGG | + | chr3.4:77371100-77371119 | MS.gene69767:intron | 25.0% |
| !!! | TTTTTTCTCCATTTCATTAG+GGG | - | chr3.4:77372928-77372947 | None:intergenic | 25.0% |
| AAAATTACCTGTTACAGCAA+AGG | - | chr3.4:77375008-77375027 | None:intergenic | 30.0% | |
| AACAGTTATGGACAGATAAT+TGG | + | chr3.4:77371939-77371958 | MS.gene69767:CDS | 30.0% | |
| AACATGTTAAATATGCACAG+TGG | + | chr3.4:77371784-77371803 | MS.gene69767:intron | 30.0% | |
| AACTGAAATAACACAACTTG+GGG | - | chr3.4:77371248-77371267 | None:intergenic | 30.0% | |
| AAGAGATAACTGATGAAGAA+AGG | - | chr3.4:77371207-77371226 | None:intergenic | 30.0% | |
| AATATGTTGGTATCCACTAT+AGG | + | chr3.4:77370617-77370636 | MS.gene69767:intron | 30.0% | |
| AATTTCCATATTTCAGTGCA+TGG | + | chr3.4:77373998-77374017 | MS.gene69767:CDS | 30.0% | |
| ACTTTGAATTAACCCTATAG+TGG | - | chr3.4:77370633-77370652 | None:intergenic | 30.0% | |
| AGTAATCTTGTCCTAAATGT+TGG | + | chr3.4:77372197-77372216 | MS.gene69767:intron | 30.0% | |
| ATATGTTGGTATCCACTATA+GGG | + | chr3.4:77370618-77370637 | MS.gene69767:intron | 30.0% | |
| ATCAAATTGACTAGTAATGG+GGG | - | chr3.4:77374774-77374793 | None:intergenic | 30.0% | |
| ATTCAATATGTCAGGAATCT+TGG | - | chr3.4:77373568-77373587 | None:intergenic | 30.0% | |
| ATTTCCATATTTCAGTGCAT+GGG | + | chr3.4:77373999-77374018 | MS.gene69767:CDS | 30.0% | |
| ATTTGGAAGGAAGAAAACAT+GGG | - | chr3.4:77373313-77373332 | None:intergenic | 30.0% | |
| CAAAAATACCCCTAATGAAA+TGG | + | chr3.4:77372917-77372936 | MS.gene69767:intron | 30.0% | |
| CCATTACTAGTCAATTTGAT+CGG | + | chr3.4:77374774-77374793 | MS.gene69767:CDS | 30.0% | |
| CCTTTATTATCCCCAAAAAA+AGG | - | chr3.4:77372135-77372154 | None:intergenic | 30.0% | |
| CGATCAAATTGACTAGTAAT+GGG | - | chr3.4:77374776-77374795 | None:intergenic | 30.0% | |
| CTAATATGTGTTGTGAAAAC+TGG | - | chr3.4:77375289-77375308 | None:intergenic | 30.0% | |
| CTGTGTATATTAGCAAAAGT+TGG | + | chr3.4:77370188-77370207 | MS.gene69767:intron | 30.0% | |
| CTTAATCCCTGTATCATTAA+TGG | + | chr3.4:77371874-77371893 | MS.gene69767:intron | 30.0% | |
| CTTCAAATTCAATCTCTGTT+TGG | - | chr3.4:77370862-77370881 | None:intergenic | 30.0% | |
| GAAACAAAATAAACTAAGGC+AGG | - | chr3.4:77375485-77375504 | None:intergenic | 30.0% | |
| GAACTGAAATAACACAACTT+GGG | - | chr3.4:77371249-77371268 | None:intergenic | 30.0% | |
| GACCTTATAAGTTAAACCTT+TGG | + | chr3.4:77372566-77372585 | MS.gene69767:intron | 30.0% | |
| GATCAAATTGACTAGTAATG+GGG | - | chr3.4:77374775-77374794 | None:intergenic | 30.0% | |
| GCATATAATTCCAAAACTGT+AGG | + | chr3.4:77372047-77372066 | MS.gene69767:intron | 30.0% | |
| GTAAGATAATAGTGCTATCA+CGG | + | chr3.4:77371032-77371051 | MS.gene69767:intron | 30.0% | |
| GTAGTAGATATTCCAGTTAA+AGG | - | chr3.4:77375032-77375051 | None:intergenic | 30.0% | |
| GTTATGAATTCCTGGATATT+TGG | - | chr3.4:77374534-77374553 | None:intergenic | 30.0% | |
| TAAATCATAGGATTCAGCAA+GGG | - | chr3.4:77373508-77373527 | None:intergenic | 30.0% | |
| TATAGCATAAGTGCTTATTG+CGG | + | chr3.4:77369659-77369678 | MS.gene69767:intron | 30.0% | |
| TATGAATTCCTGGATATTTG+GGG | - | chr3.4:77374532-77374551 | None:intergenic | 30.0% | |
| TCAAATGAGCCAATCTAAAA+AGG | + | chr3.4:77370009-77370028 | MS.gene69767:intron | 30.0% | |
| TCTATTATTAAACTACAGGC+TGG | + | chr3.4:77372607-77372626 | MS.gene69767:intron | 30.0% | |
| TGAAAACTGAACTGTTATTC+AGG | - | chr3.4:77374662-77374681 | None:intergenic | 30.0% | |
| TGAAGAGGGACTTATAAAAA+GGG | - | chr3.4:77372868-77372887 | None:intergenic | 30.0% | |
| TGGATCTTGATACAAACATA+TGG | + | chr3.4:77370501-77370520 | MS.gene69767:CDS | 30.0% | |
| TGGGACAGAATAATAAACAA+GGG | - | chr3.4:77374232-77374251 | None:intergenic | 30.0% | |
| TTAAATCATAGGATTCAGCA+AGG | - | chr3.4:77373509-77373528 | None:intergenic | 30.0% | |
| TTAATAGGTTCTCCTATTGA+TGG | + | chr3.4:77370969-77370988 | MS.gene69767:intron | 30.0% | |
| TTAATTCTGTTGCAGGTTTA+TGG | + | chr3.4:77373947-77373966 | MS.gene69767:intron | 30.0% | |
| TTCAATATGTCAGGAATCTT+GGG | - | chr3.4:77373567-77373586 | None:intergenic | 30.0% | |
| TTCCTATTTATAGCGTGATA+GGG | - | chr3.4:77371766-77371785 | None:intergenic | 30.0% | |
| TTGAAGAGGGACTTATAAAA+AGG | - | chr3.4:77372869-77372888 | None:intergenic | 30.0% | |
| TTGGGACAGAATAATAAACA+AGG | - | chr3.4:77374233-77374252 | None:intergenic | 30.0% | |
| ! | CAGGTAATTTTTCCTTTAAC+TGG | + | chr3.4:77375017-77375036 | MS.gene69767:intron | 30.0% |
| ! | GACAGACAAATTTTACAAGA+GGG | - | chr3.4:77372846-77372865 | None:intergenic | 30.0% |
| ! | GTTATCCATGATTTGTCATT+TGG | + | chr3.4:77374506-77374525 | MS.gene69767:CDS | 30.0% |
| ! | TACATGGTTTGCATTTGATT+GGG | + | chr3.4:77372077-77372096 | MS.gene69767:intron | 30.0% |
| ! | TATTGTGATGGTGACTTAAT+AGG | + | chr3.4:77370954-77370973 | MS.gene69767:intron | 30.0% |
| ! | TCTTAAGTCTATTTTCCGAA+TGG | + | chr3.4:77371626-77371645 | MS.gene69767:intron | 30.0% |
| ! | TGCCAAAGGTTTAACTTATA+AGG | - | chr3.4:77372571-77372590 | None:intergenic | 30.0% |
| ! | TTACATGGTTTGCATTTGAT+TGG | + | chr3.4:77372076-77372095 | MS.gene69767:intron | 30.0% |
| ! | TTGCTTACTTTGGAAGATTT+AGG | + | chr3.4:77370746-77370765 | MS.gene69767:intron | 30.0% |
| !! | ATGGTGTTTTAGATGTTCAA+AGG | + | chr3.4:77373966-77373985 | MS.gene69767:CDS | 30.0% |
| !! | GAGTTTCATTTTTCGTTTTG+AGG | + | chr3.4:77370366-77370385 | MS.gene69767:intron | 30.0% |
| !! | GATACCTAATTTGATAGTGA+TGG | + | chr3.4:77374437-77374456 | MS.gene69767:intron | 30.0% |
| !! | GTTTGGTTCAAAATTTTGGA+GGG | - | chr3.4:77373394-77373413 | None:intergenic | 30.0% |
| !! | TGGTGTTTTAGATGTTCAAA+GGG | + | chr3.4:77373967-77373986 | MS.gene69767:CDS | 30.0% |
| !! | TGTTTGGTTCAAAATTTTGG+AGG | - | chr3.4:77373395-77373414 | None:intergenic | 30.0% |
| !!! | AGCTTGTTAATAGACCTTTT+TGG | + | chr3.4:77370530-77370549 | MS.gene69767:intron | 30.0% |
| !!! | CCTTTTTTTGGGGATAATAA+AGG | + | chr3.4:77372132-77372151 | MS.gene69767:intron | 30.0% |
| !!! | TTTCATTAGGGGTATTTTTG+TGG | - | chr3.4:77372917-77372936 | None:intergenic | 30.0% |
| AAAAAATGGAGAAGGATGCA+GGG | + | chr3.4:77373847-77373866 | MS.gene69767:CDS | 35.0% | |
| AAAGTTGAGAGGATGTATCT+TGG | + | chr3.4:77373357-77373376 | MS.gene69767:intron | 35.0% | |
| AAATACCATCAAGAAGGTGA+AGG | + | chr3.4:77373817-77373836 | MS.gene69767:CDS | 35.0% | |
| AACATTTATCACCTGCAACA+TGG | + | chr3.4:77372703-77372722 | MS.gene69767:intron | 35.0% | |
| AACCATCACAAGGTAAAGAA+GGG | - | chr3.4:77370312-77370331 | None:intergenic | 35.0% | |
| AACTGATGAAGAAAGGAGTT+GGG | - | chr3.4:77371200-77371219 | None:intergenic | 35.0% | |
| AAGAAGTAGTTGAGAGAAGT+TGG | - | chr3.4:77371717-77371736 | None:intergenic | 35.0% | |
| AAGGGATTGTAGCAATTTCA+TGG | + | chr3.4:77371119-77371138 | MS.gene69767:intron | 35.0% | |
| ACAGATCACTATTAAGCTGA+GGG | - | chr3.4:77370805-77370824 | None:intergenic | 35.0% | |
| ACCAACACATTTACATCAAC+AGG | + | chr3.4:77375525-77375544 | MS.gene69767:intron | 35.0% | |
| ACTTCAAACTAAATCCAACC+TGG | - | chr3.4:77374806-77374825 | None:intergenic | 35.0% | |
| AGAAAGGAGTTGGGAAAAAT+AGG | - | chr3.4:77371191-77371210 | None:intergenic | 35.0% | |
| AGAAGTAGTTGAGAGAAGTT+GGG | - | chr3.4:77371716-77371735 | None:intergenic | 35.0% | |
| AGATCTTCAGTCCAACATTT+AGG | - | chr3.4:77372211-77372230 | None:intergenic | 35.0% | |
| AGGGATCTTATATATAGGGA+CGG | + | chr3.4:77372966-77372985 | MS.gene69767:intron | 35.0% | |
| AGGGATTGTAGCAATTTCAT+GGG | + | chr3.4:77371120-77371139 | MS.gene69767:intron | 35.0% | |
| AGTTAAGTTTACGCAGTGTT+TGG | - | chr3.4:77373464-77373483 | None:intergenic | 35.0% | |
| ATATCGTGAAGCGACAATAA+TGG | + | chr3.4:77373065-77373084 | MS.gene69767:intron | 35.0% | |
| ATGTTTGCCAGACATATCAA+TGG | - | chr3.4:77370477-77370496 | None:intergenic | 35.0% | |
| CACTGAAAATACCATCAAGA+AGG | + | chr3.4:77373811-77373830 | MS.gene69767:CDS | 35.0% | |
| CAGACTGTTCAATATTGTGA+TGG | + | chr3.4:77370942-77370961 | MS.gene69767:intron | 35.0% | |
| CAGTTATTTAGTATGCAGTC+AGG | - | chr3.4:77371693-77371712 | None:intergenic | 35.0% | |
| CCGATCAAATTGACTAGTAA+TGG | - | chr3.4:77374777-77374796 | None:intergenic | 35.0% | |
| GAAGTGAAACATCCATCAAT+AGG | - | chr3.4:77370984-77371003 | None:intergenic | 35.0% | |
| GAGTGAATAGTGCATATACT+TGG | - | chr3.4:77372481-77372500 | None:intergenic | 35.0% | |
| GATTTGGAAGGAAGAAAACA+TGG | - | chr3.4:77373314-77373333 | None:intergenic | 35.0% | |
| GCAAGAATTCAAGCTAACTA+GGG | + | chr3.4:77375391-77375410 | MS.gene69767:intron | 35.0% | |
| GCTACATATGCAAAATCAAC+AGG | - | chr3.4:77374881-77374900 | None:intergenic | 35.0% | |
| GGAACTGAAATAACACAACT+TGG | - | chr3.4:77371250-77371269 | None:intergenic | 35.0% | |
| GGATATAGTATGCGCTTTAT+TGG | + | chr3.4:77372414-77372433 | MS.gene69767:intron | 35.0% | |
| GTAACTGAGAACTGATTAGT+CGG | - | chr3.4:77374740-77374759 | None:intergenic | 35.0% | |
| GTTCCTATTTATAGCGTGAT+AGG | - | chr3.4:77371767-77371786 | None:intergenic | 35.0% | |
| TAAAAAATGGAGAAGGATGC+AGG | + | chr3.4:77373846-77373865 | MS.gene69767:CDS | 35.0% | |
| TAACCATCACAAGGTAAAGA+AGG | - | chr3.4:77370313-77370332 | None:intergenic | 35.0% | |
| TAACTGATGAAGAAAGGAGT+TGG | - | chr3.4:77371201-77371220 | None:intergenic | 35.0% | |
| TACAACTTACACTGTTCATC+AGG | + | chr3.4:77369530-77369549 | MS.gene69767:CDS | 35.0% | |
| TACCCTATCACGCTATAAAT+AGG | + | chr3.4:77371761-77371780 | MS.gene69767:intron | 35.0% | |
| TATAGCATAAGTGCTTATCG+TGG | + | chr3.4:77369788-77369807 | MS.gene69767:intron | 35.0% | |
| TATATCCGACATGATCATAG+AGG | - | chr3.4:77372401-77372420 | None:intergenic | 35.0% | |
| TATTCACTCTTAATCCCCAT+CGG | + | chr3.4:77372492-77372511 | MS.gene69767:intron | 35.0% | |
| TCAATCTCGCAAGTCATAAT+CGG | - | chr3.4:77375188-77375207 | None:intergenic | 35.0% | |
| TCTTACACTAGTGACTGATA+TGG | - | chr3.4:77371018-77371037 | None:intergenic | 35.0% | |
| TGCAAGAATTCAAGCTAACT+AGG | + | chr3.4:77375390-77375409 | MS.gene69767:intron | 35.0% | |
| TGCAGGTGATAAATGTTGAA+TGG | - | chr3.4:77372700-77372719 | None:intergenic | 35.0% | |
| TGGTTCAACTGTATTTGTAC+CGG | + | chr3.4:77375158-77375177 | MS.gene69767:intron | 35.0% | |
| TTGATTGCAGTTTCGATCAT+TGG | + | chr3.4:77369459-77369478 | MS.gene69767:intron | 35.0% | |
| TTGTTGCAGAAAACTCAATC+TGG | + | chr3.4:77369312-77369331 | MS.gene69767:CDS | 35.0% | |
| TTTGGAAGGAAGAAAACATG+GGG | - | chr3.4:77373312-77373331 | None:intergenic | 35.0% | |
| ! | AATTTGAAGTTTCCTATGCG+AGG | + | chr3.4:77370873-77370892 | MS.gene69767:intron | 35.0% |
| ! | AGTCTTGTATCCTTCCATAT+CGG | + | chr3.4:77370650-77370669 | MS.gene69767:intron | 35.0% |
| ! | ATAGGTTTTTCGTCCATTGT+TGG | - | chr3.4:77371173-77371192 | None:intergenic | 35.0% |
| ! | ATTGATGGATGTTTCACTTC+TGG | + | chr3.4:77370984-77371003 | MS.gene69767:intron | 35.0% |
| ! | ATTTTCAGTGGCTTCATCAA+AGG | - | chr3.4:77373801-77373820 | None:intergenic | 35.0% |
| ! | GAGGCATTAAAAAATGGAGA+AGG | + | chr3.4:77373839-77373858 | MS.gene69767:CDS | 35.0% |
| ! | GGACAGACAAATTTTACAAG+AGG | - | chr3.4:77372847-77372866 | None:intergenic | 35.0% |
| ! | GTTTTTGTCAAATGTGCCAA+AGG | - | chr3.4:77372585-77372604 | None:intergenic | 35.0% |
| ! | TTGATGGATGTTTCACTTCT+GGG | + | chr3.4:77370985-77371004 | MS.gene69767:intron | 35.0% |
| ! | TTTCTGGCATTCAATATGTC+AGG | - | chr3.4:77373576-77373595 | None:intergenic | 35.0% |
| !! | CAAAATTTTGGAGGGAATTG+AGG | - | chr3.4:77373386-77373405 | None:intergenic | 35.0% |
| !! | CTTCTTGATGGTATTTTCAG+TGG | - | chr3.4:77373813-77373832 | None:intergenic | 35.0% |
| !! | GGTTATTTTCATTTGACGAC+TGG | + | chr3.4:77372098-77372117 | MS.gene69767:intron | 35.0% |
| !! | GGTTGGATTTAGTTTGAAGT+TGG | + | chr3.4:77374806-77374825 | MS.gene69767:intron | 35.0% |
| !! | GGTTTAAGTTGAAGAGTTCT+CGG | + | chr3.4:77373220-77373239 | MS.gene69767:intron | 35.0% |
| !! | GTGAAGGAGGCATTAAAAAA+TGG | + | chr3.4:77373833-77373852 | MS.gene69767:CDS | 35.0% |
| !! | TCCTTGATAGTGACAGTAAT+AGG | - | chr3.4:77374929-77374948 | None:intergenic | 35.0% |
| !! | TTGCGAGATTGACTGATTTT+CGG | + | chr3.4:77375196-77375215 | MS.gene69767:intron | 35.0% |
| !!! | ATTGACTGATTTTCGGGTTA+AGG | + | chr3.4:77375203-77375222 | MS.gene69767:intron | 35.0% |
| !!! | GTTCTGTGTTTTTTCCGATA+TGG | - | chr3.4:77370667-77370686 | None:intergenic | 35.0% |
| !!! | TGTGTTTTTTCCGATATGGA+AGG | - | chr3.4:77370663-77370682 | None:intergenic | 35.0% |
| AAAACTCAATCTGGTGCTCT+TGG | + | chr3.4:77369321-77369340 | MS.gene69767:CDS | 40.0% | |
| ACAAGAGGGTCTTACACATA+AGG | - | chr3.4:77372832-77372851 | None:intergenic | 40.0% | |
| AGCAGCTAGTATACCAACAA+TGG | + | chr3.4:77371157-77371176 | MS.gene69767:intron | 40.0% | |
| ATCCTTGATGTCTCATCAAG+TGG | - | chr3.4:77374557-77374576 | None:intergenic | 40.0% | |
| ATGCATCTTGTAGCTTGAAG+AGG | - | chr3.4:77372883-77372902 | None:intergenic | 40.0% | |
| ATGCATTGTTAGCACTCTGA+AGG | - | chr3.4:77371592-77371611 | None:intergenic | 40.0% | |
| ATGGGTGACAATAGATGTGA+TGG | + | chr3.4:77373117-77373136 | MS.gene69767:intron | 40.0% | |
| ATTCACTCTTAATCCCCATC+GGG | + | chr3.4:77372493-77372512 | MS.gene69767:intron | 40.0% | |
| ATTTACATCAACAGGCATGC+TGG | + | chr3.4:77375533-77375552 | MS.gene69767:intron | 40.0% | |
| CACAGATCACTATTAAGCTG+AGG | - | chr3.4:77370806-77370825 | None:intergenic | 40.0% | |
| CAGCTTCGTTTGAACAGTTA+TGG | + | chr3.4:77371927-77371946 | MS.gene69767:intron | 40.0% | |
| CTAGTCAATTTGATCGGACA+TGG | + | chr3.4:77374780-77374799 | MS.gene69767:CDS | 40.0% | |
| GATCATAACACACACAAGCA+TGG | + | chr3.4:77372005-77372024 | MS.gene69767:CDS | 40.0% | |
| GATCTTATATATAGGGACGG+AGG | + | chr3.4:77372969-77372988 | MS.gene69767:intron | 40.0% | |
| GCCTATTACTGTCACTATCA+AGG | + | chr3.4:77374925-77374944 | MS.gene69767:CDS | 40.0% | |
| GCCTGTTGATGTAAATGTGT+TGG | - | chr3.4:77375529-77375548 | None:intergenic | 40.0% | |
| GGACTGAAGATCTCAATGAA+AGG | + | chr3.4:77372218-77372237 | MS.gene69767:intron | 40.0% | |
| TACCTGAACCTGTAAGTTCT+AGG | - | chr3.4:77374157-77374176 | None:intergenic | 40.0% | |
| TCACAGCTTATGAGAGAGAA+GGG | - | chr3.4:77370689-77370708 | None:intergenic | 40.0% | |
| TCCTTGATGTCTCATCAAGT+GGG | - | chr3.4:77374556-77374575 | None:intergenic | 40.0% | |
| TCTCCCAAAAGCTTAAGCTA+AGG | - | chr3.4:77372354-77372373 | None:intergenic | 40.0% | |
| TGATATGTCTGGCAAACATG+AGG | + | chr3.4:77370478-77370497 | MS.gene69767:CDS | 40.0% | |
| TGCATCTTGTAGCTTGAAGA+GGG | - | chr3.4:77372882-77372901 | None:intergenic | 40.0% | |
| TTACACATAAGGACACAGGT+AGG | - | chr3.4:77372821-77372840 | None:intergenic | 40.0% | |
| TTAGATGTTCAAAGGGTTGC+TGG | + | chr3.4:77373974-77373993 | MS.gene69767:CDS | 40.0% | |
| TTAGCCCATGCACTGAAATA+TGG | - | chr3.4:77374006-77374025 | None:intergenic | 40.0% | |
| TTATCACCTGCAACATGGAA+AGG | + | chr3.4:77372708-77372727 | MS.gene69767:intron | 40.0% | |
| TTCACAGCTTATGAGAGAGA+AGG | - | chr3.4:77370690-77370709 | None:intergenic | 40.0% | |
| TTCCCTTCTTTACCTTGTGA+TGG | + | chr3.4:77370307-77370326 | MS.gene69767:CDS | 40.0% | |
| TTCCTAGAACTTACAGGTTC+AGG | + | chr3.4:77374152-77374171 | MS.gene69767:intron | 40.0% | |
| TTCTTCCCCTTGCAAATCAA+AGG | - | chr3.4:77372746-77372765 | None:intergenic | 40.0% | |
| ! | CTGCCTTAGCTTAAGCTTTT+GGG | + | chr3.4:77372348-77372367 | MS.gene69767:intron | 40.0% |
| ! | CTTTTTCTGCGATTCTCTGT+TGG | + | chr3.4:77370433-77370452 | MS.gene69767:intron | 40.0% |
| ! | GTGACAATAGATGTGATGGA+GGG | + | chr3.4:77373121-77373140 | MS.gene69767:intron | 40.0% |
| ! | TCTGCCTTAGCTTAAGCTTT+TGG | + | chr3.4:77372347-77372366 | MS.gene69767:intron | 40.0% |
| ! | TGGTGATGACATAAAGGTAG+AGG | + | chr3.4:77373253-77373272 | MS.gene69767:intron | 40.0% |
| !! | AGGGAAACCTTTGATTTGCA+AGG | + | chr3.4:77372736-77372755 | MS.gene69767:intron | 40.0% |
| !! | GGAAACCTTTGATTTGCAAG+GGG | + | chr3.4:77372738-77372757 | MS.gene69767:intron | 40.0% |
| !! | GGGAAACCTTTGATTTGCAA+GGG | + | chr3.4:77372737-77372756 | MS.gene69767:intron | 40.0% |
| !! | TCAAGTGGGTTATGAATTCC+TGG | - | chr3.4:77374542-77374561 | None:intergenic | 40.0% |
| !! | TGCGAGATTGACTGATTTTC+GGG | + | chr3.4:77375197-77375216 | MS.gene69767:intron | 40.0% |
| !!! | GCTTTTGGGAGAGTATTTCT+TGG | + | chr3.4:77372362-77372381 | MS.gene69767:intron | 40.0% |
| !!! | TCTGTTGGCAGTTTTAAGTG+TGG | + | chr3.4:77370448-77370467 | MS.gene69767:intron | 40.0% |
| AAACGGGAATGAGTTGTGGT+AGG | - | chr3.4:77372166-77372185 | None:intergenic | 45.0% | |
| AAATCCCTCCCAATGTTGGA+GGG | + | chr3.4:77373329-77373348 | MS.gene69767:intron | 45.0% | |
| AACAAATGATCCTCTGTGCG+AGG | - | chr3.4:77369297-77369316 | None:intergenic | 45.0% | |
| AACATTGGGAGGGATTTGGA+AGG | - | chr3.4:77373326-77373345 | None:intergenic | 45.0% | |
| AACCTCAAACCATCACTGTC+TGG | - | chr3.4:77373153-77373172 | None:intergenic | 45.0% | |
| AAGTTTACGCAGTGTTTGGC+AGG | - | chr3.4:77373460-77373479 | None:intergenic | 45.0% | |
| ACACAAACGGGAATGAGTTG+TGG | - | chr3.4:77372170-77372189 | None:intergenic | 45.0% | |
| ACCCACTTGATGAGACATCA+AGG | + | chr3.4:77374552-77374571 | MS.gene69767:CDS | 45.0% | |
| AGTTTACGCAGTGTTTGGCA+GGG | - | chr3.4:77373459-77373478 | None:intergenic | 45.0% | |
| ATCATAGGATTCAGCAAGGG+TGG | - | chr3.4:77373505-77373524 | None:intergenic | 45.0% | |
| ATGTCGCTATGATAGGAACC+CGG | + | chr3.4:77371485-77371504 | MS.gene69767:intron | 45.0% | |
| ATGTCTGTAGACTTGAAGCG+TGG | + | chr3.4:77370253-77370272 | MS.gene69767:CDS | 45.0% | |
| CAACGAGTCTGTACATCCAA+CGG | - | chr3.4:77375560-77375579 | None:intergenic | 45.0% | |
| CAGAGCCTCTATGATCATGT+CGG | + | chr3.4:77372393-77372412 | MS.gene69767:intron | 45.0% | |
| CATCGGGCTCTTATGTAAGA+GGG | + | chr3.4:77372509-77372528 | MS.gene69767:intron | 45.0% | |
| CTCTTACATAAGAGCCCGAT+GGG | - | chr3.4:77372510-77372529 | None:intergenic | 45.0% | |
| GACAATAATGGTGTGGAGCA+TGG | + | chr3.4:77373077-77373096 | MS.gene69767:intron | 45.0% | |
| GCAACATGGAAAGGAGGATA+GGG | + | chr3.4:77372717-77372736 | MS.gene69767:intron | 45.0% | |
| GCAAGTCATAATCGGTGAAC+CGG | - | chr3.4:77375180-77375199 | None:intergenic | 45.0% | |
| GGGACAATGAAGAGAAGATG+AGG | - | chr3.4:77373437-77373456 | None:intergenic | 45.0% | |
| GGTCTTACACATAAGGACAC+AGG | - | chr3.4:77372825-77372844 | None:intergenic | 45.0% | |
| GGTGACAATAGATGTGATGG+AGG | + | chr3.4:77373120-77373139 | MS.gene69767:intron | 45.0% | |
| GTGAAGCGACAATAATGGTG+TGG | + | chr3.4:77373070-77373089 | MS.gene69767:intron | 45.0% | |
| GTGGATGCCATTGATATGTC+TGG | + | chr3.4:77370467-77370486 | MS.gene69767:CDS | 45.0% | |
| TACCATCAAGAAGGTGAAGG+AGG | + | chr3.4:77373820-77373839 | MS.gene69767:CDS | 45.0% | |
| TACCTTGTGATGGTTAGCAC+AGG | + | chr3.4:77370317-77370336 | MS.gene69767:intron | 45.0% | |
| TATCCTCCTTTCCATGTTGC+AGG | - | chr3.4:77372717-77372736 | None:intergenic | 45.0% | |
| TATGTCTGGCAAACATGAGG+TGG | + | chr3.4:77370481-77370500 | MS.gene69767:CDS | 45.0% | |
| TCATTTGGCCCCAAATATCC+AGG | + | chr3.4:77374521-77374540 | MS.gene69767:CDS | 45.0% | |
| TCTTACATAAGAGCCCGATG+GGG | - | chr3.4:77372509-77372528 | None:intergenic | 45.0% | |
| TGATAGGGTAACTGCTGATG+CGG | - | chr3.4:77371751-77371770 | None:intergenic | 45.0% | |
| TGCAACATGGAAAGGAGGAT+AGG | + | chr3.4:77372716-77372735 | MS.gene69767:intron | 45.0% | |
| TGGGGCCAAATGACAAATCA+TGG | - | chr3.4:77374514-77374533 | None:intergenic | 45.0% | |
| TTCCAAATCCCTCCCAATGT+TGG | + | chr3.4:77373325-77373344 | MS.gene69767:intron | 45.0% | |
| TTTCCTATGCGAGGTTCGTT+GGG | + | chr3.4:77370882-77370901 | MS.gene69767:intron | 45.0% | |
| ! | AGTGATGGTTTGAGGTTGTC+TGG | + | chr3.4:77373156-77373175 | MS.gene69767:intron | 45.0% |
| ! | GGAGAGTGGTGATGACATAA+AGG | + | chr3.4:77373247-77373266 | MS.gene69767:intron | 45.0% |
| ! | TTTAGCTCCCCTCCAACATT+GGG | - | chr3.4:77373340-77373359 | None:intergenic | 45.0% |
| ! | TTTTCTCCAGATCTTCGACG+CGG | + | chr3.4:77374460-77374479 | MS.gene69767:intron | 45.0% |
| !! | ACGTTGTTTCTGCACGAGTT+GGG | + | chr3.4:77369498-77369517 | MS.gene69767:CDS | 45.0% |
| !! | AGCATTTGCTCTGGGATTAC+AGG | - | chr3.4:77371569-77371588 | None:intergenic | 45.0% |
| !! | CATTTGCTCTGGGATTACAG+GGG | - | chr3.4:77371567-77371586 | None:intergenic | 45.0% |
| !! | GCATTTGCTCTGGGATTACA+GGG | - | chr3.4:77371568-77371587 | None:intergenic | 45.0% |
| !! | TACGTTGTTTCTGCACGAGT+TGG | + | chr3.4:77369497-77369516 | MS.gene69767:CDS | 45.0% |
| !! | TCTGAAGGAGCATTTGCTCT+GGG | - | chr3.4:77371577-77371596 | None:intergenic | 45.0% |
| !! | TGGGAGAGTATTTCTTGGCA+CGG | + | chr3.4:77372367-77372386 | MS.gene69767:intron | 45.0% |
| !! | AGTATTTATTATTATTATAA+GGG | - | chr3.4:77372797-77372816 | None:intergenic | 5.0% |
| !! | TAGTATTTATTATTATTATA+AGG | - | chr3.4:77372798-77372817 | None:intergenic | 5.0% |
| !!! | TTTTTTTTTGTATTTAATTT+TGG | + | chr3.4:77369726-77369745 | MS.gene69767:intron | 5.0% |
| AAATCCACTGCCACCAACGT+TGG | - | chr3.4:77373283-77373302 | None:intergenic | 50.0% | |
| AATCCACTGCCACCAACGTT+GGG | - | chr3.4:77373282-77373301 | None:intergenic | 50.0% | |
| AATCCCTCCCAATGTTGGAG+GGG | + | chr3.4:77373330-77373349 | MS.gene69767:intron | 50.0% | |
| AGCAAAGGTTCCACCTAGCA+CGG | - | chr3.4:77374993-77375012 | None:intergenic | 50.0% | |
| AGCCAGACAGTGATGGTTTG+AGG | + | chr3.4:77373148-77373167 | MS.gene69767:intron | 50.0% | |
| AGGATTCTGCATGATGCGAG+TGG | + | chr3.4:77374572-77374591 | MS.gene69767:CDS | 50.0% | |
| AGTTGAAGAGTTCTCGGCAG+TGG | + | chr3.4:77373226-77373245 | MS.gene69767:intron | 50.0% | |
| ATTCGTCGACAAGTCGAACG+AGG | + | chr3.4:77375254-77375273 | MS.gene69767:intron | 50.0% | |
| CAAATCCCTCCCAATGTTGG+AGG | + | chr3.4:77373328-77373347 | MS.gene69767:intron | 50.0% | |
| CAAGTTCTGCCATGTAGTGG+CGG | + | chr3.4:77373008-77373027 | MS.gene69767:intron | 50.0% | |
| CAATTTGATCGGACATGGCC+AGG | + | chr3.4:77374785-77374804 | MS.gene69767:CDS | 50.0% | |
| CCATCGGGCTCTTATGTAAG+AGG | + | chr3.4:77372508-77372527 | MS.gene69767:intron | 50.0% | |
| CCTCTTACATAAGAGCCCGA+TGG | - | chr3.4:77372511-77372530 | None:intergenic | 50.0% | |
| CGAATCGAGAACGACGAATC+AGG | - | chr3.4:77375239-77375258 | None:intergenic | 50.0% | |
| CTCCAACATTGGGAGGGATT+TGG | - | chr3.4:77373330-77373349 | None:intergenic | 50.0% | |
| CTGCTCCATGTCGCTATGAT+AGG | + | chr3.4:77371478-77371497 | MS.gene69767:intron | 50.0% | |
| GGGTTCCTATCATAGCGACA+TGG | - | chr3.4:77371486-77371505 | None:intergenic | 50.0% | |
| GTTTACGCAGTGTTTGGCAG+GGG | - | chr3.4:77373458-77373477 | None:intergenic | 50.0% | |
| GTTTCCTATGCGAGGTTCGT+TGG | + | chr3.4:77370881-77370900 | MS.gene69767:intron | 50.0% | |
| TCAAACCATCACTGTCTGGC+TGG | - | chr3.4:77373149-77373168 | None:intergenic | 50.0% | |
| TCACCTGCAACATGGAAAGG+AGG | + | chr3.4:77372711-77372730 | MS.gene69767:intron | 50.0% | |
| TGCCAAGTTCTGCCATGTAG+TGG | + | chr3.4:77373005-77373024 | MS.gene69767:intron | 50.0% | |
| TGCCTCCTTCACCTTCTTGA+TGG | - | chr3.4:77373825-77373844 | None:intergenic | 50.0% | |
| TGCCTGTGCTAACCATCACA+AGG | - | chr3.4:77370322-77370341 | None:intergenic | 50.0% | |
| TTTACGCAGTGTTTGGCAGG+GGG | - | chr3.4:77373457-77373476 | None:intergenic | 50.0% | |
| TTTCTCCAGATCTTCGACGC+GGG | + | chr3.4:77374461-77374480 | MS.gene69767:intron | 50.0% | |
| ! | AGCATGGTGTCAATGACGGA+GGG | + | chr3.4:77373093-77373112 | MS.gene69767:intron | 50.0% |
| ! | CTTTAGCTCCCCTCCAACAT+TGG | - | chr3.4:77373341-77373360 | None:intergenic | 50.0% |
| ! | GGTGGAACCTTTGCTGTAAC+AGG | + | chr3.4:77374998-77375017 | MS.gene69767:CDS | 50.0% |
| ! | GTGGAGCATGGTGTCAATGA+CGG | + | chr3.4:77373089-77373108 | MS.gene69767:intron | 50.0% |
| !! | CTCTGAAGGAGCATTTGCTC+TGG | - | chr3.4:77371578-77371597 | None:intergenic | 50.0% |
| AGGTAGAGGCTACCCAACGT+TGG | + | chr3.4:77373267-77373286 | MS.gene69767:intron | 55.0% | |
| CAAGTCGAACGAGGCGGTAT+AGG | + | chr3.4:77375263-77375282 | MS.gene69767:intron | 55.0% | |
| CATCCCAACGAACCTCGCAT+AGG | - | chr3.4:77370888-77370907 | None:intergenic | 55.0% | |
| CGATATCCTCCATGCCACCA+TGG | - | chr3.4:77373051-77373070 | None:intergenic | 55.0% | |
| CGATGCATTTCCTCGCACAG+AGG | + | chr3.4:77369284-77369303 | MS.gene69767:CDS | 55.0% | |
| CGCCACTACATGGCAGAACT+TGG | - | chr3.4:77373010-77373029 | None:intergenic | 55.0% | |
| GGAGGGGAGCTAAAGTTGAG+AGG | + | chr3.4:77373346-77373365 | MS.gene69767:intron | 55.0% | |
| GTTGTCTGGATGCCTAGCAG+AGG | + | chr3.4:77373170-77373189 | MS.gene69767:intron | 55.0% | |
| TAGAGGCTACCCAACGTTGG+TGG | + | chr3.4:77373270-77373289 | MS.gene69767:intron | 55.0% | |
| TCTTTCCCGCGTCGAAGATC+TGG | - | chr3.4:77374469-77374488 | None:intergenic | 55.0% | |
| TGGTTGAGGATGCCAGACCA+TGG | + | chr3.4:77373031-77373050 | MS.gene69767:intron | 55.0% | |
| TTGAGGATGCCAGACCATGG+TGG | + | chr3.4:77373034-77373053 | MS.gene69767:intron | 55.0% | |
| TTGATCGGACATGGCCAGGT+TGG | + | chr3.4:77374789-77374808 | MS.gene69767:intron | 55.0% | |
| ! | GAGCATGGTGTCAATGACGG+AGG | + | chr3.4:77373092-77373111 | MS.gene69767:intron | 55.0% |
| ! | GTGTCAATGACGGAGGGCAT+GGG | + | chr3.4:77373099-77373118 | MS.gene69767:intron | 55.0% |
| ACCTAGCACGGCACAAAGCC+GGG | - | chr3.4:77374981-77375000 | None:intergenic | 60.0% | |
| AGCTCCCCTCCAACATTGGG+AGG | - | chr3.4:77373337-77373356 | None:intergenic | 60.0% | |
| CAACAGGCATGCTGGACCGT+TGG | + | chr3.4:77375541-77375560 | MS.gene69767:intron | 60.0% | |
| CACCTAGCACGGCACAAAGC+CGG | - | chr3.4:77374982-77375001 | None:intergenic | 60.0% | |
| CCATGTAGTGGCGGTGGTTG+AGG | + | chr3.4:77373017-77373036 | MS.gene69767:intron | 60.0% | |
| CCTCAACCACCGCCACTACA+TGG | - | chr3.4:77373020-77373039 | None:intergenic | 60.0% | |
| CGTCGACAAGTCGAACGAGG+CGG | + | chr3.4:77375257-77375276 | MS.gene69767:intron | 60.0% | |
| GAGTTCTCGGCAGTGGAGAG+TGG | + | chr3.4:77373233-77373252 | MS.gene69767:intron | 60.0% | |
| GATGCCAGACCATGGTGGCA+TGG | + | chr3.4:77373039-77373058 | MS.gene69767:intron | 60.0% | |
| GCTCCCCTCCAACATTGGGA+GGG | - | chr3.4:77373336-77373355 | None:intergenic | 60.0% | |
| GGATGCCTAGCAGAGGCAGT+GGG | + | chr3.4:77373177-77373196 | MS.gene69767:intron | 60.0% | |
| GTTCTGCCATGTAGTGGCGG+TGG | + | chr3.4:77373011-77373030 | MS.gene69767:intron | 60.0% | |
| TAGCAGAGGCAGTGGGTGTC+AGG | + | chr3.4:77373184-77373203 | MS.gene69767:intron | 60.0% | |
| TCCTCCATGCCACCATGGTC+TGG | - | chr3.4:77373046-77373065 | None:intergenic | 60.0% | |
| TGACACCCACTGCCTCTGCT+AGG | - | chr3.4:77373185-77373204 | None:intergenic | 60.0% | |
| TGGATGCCTAGCAGAGGCAG+TGG | + | chr3.4:77373176-77373195 | MS.gene69767:intron | 60.0% | |
| ! | GGTGTCAATGACGGAGGGCA+TGG | + | chr3.4:77373098-77373117 | MS.gene69767:intron | 60.0% |
| !! | CTACCCAACGTTGGTGGCAG+TGG | + | chr3.4:77373276-77373295 | MS.gene69767:intron | 60.0% |
| AGGCAGTGGGTGTCAGGTGC+TGG | + | chr3.4:77373190-77373209 | MS.gene69767:intron | 65.0% | |
| GCCAGACCATGGTGGCATGG+AGG | + | chr3.4:77373042-77373061 | MS.gene69767:intron | 65.0% | |
| GGGTGCCAGCCAGACAGTGA+TGG | + | chr3.4:77373141-77373160 | MS.gene69767:intron | 65.0% | |
| ! | ACCCGGCTTTGTGCCGTGCT+AGG | + | chr3.4:77374977-77374996 | MS.gene69767:CDS | 65.0% |
| ! | CGGCTTTGTGCCGTGCTAGG+TGG | + | chr3.4:77374980-77374999 | MS.gene69767:CDS | 65.0% |
| !! | GTGTCAGGTGCTGGCAGTGG+TGG | + | chr3.4:77373199-77373218 | MS.gene69767:intron | 65.0% |
| !! | TGGGTGTCAGGTGCTGGCAG+TGG | + | chr3.4:77373196-77373215 | MS.gene69767:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 77369255 | 77375611 | 77369255 | ID=MS.gene69767 |
| chr3.4 | mRNA | 77369255 | 77375611 | 77369255 | ID=MS.gene69767.t1;Parent=MS.gene69767 |
| chr3.4 | exon | 77369255 | 77369342 | 77369255 | ID=MS.gene69767.t1.exon1;Parent=MS.gene69767.t1 |
| chr3.4 | CDS | 77369255 | 77369342 | 77369255 | ID=cds.MS.gene69767.t1;Parent=MS.gene69767.t1 |
| chr3.4 | exon | 77369469 | 77369551 | 77369469 | ID=MS.gene69767.t1.exon2;Parent=MS.gene69767.t1 |
| chr3.4 | CDS | 77369469 | 77369551 | 77369469 | ID=cds.MS.gene69767.t1;Parent=MS.gene69767.t1 |
| chr3.4 | exon | 77370253 | 77370328 | 77370253 | ID=MS.gene69767.t1.exon3;Parent=MS.gene69767.t1 |
| chr3.4 | CDS | 77370253 | 77370328 | 77370253 | ID=cds.MS.gene69767.t1;Parent=MS.gene69767.t1 |
| chr3.4 | exon | 77370459 | 77370526 | 77370459 | ID=MS.gene69767.t1.exon4;Parent=MS.gene69767.t1 |
| chr3.4 | CDS | 77370459 | 77370526 | 77370459 | ID=cds.MS.gene69767.t1;Parent=MS.gene69767.t1 |
| chr3.4 | exon | 77371930 | 77372026 | 77371930 | ID=MS.gene69767.t1.exon5;Parent=MS.gene69767.t1 |
| chr3.4 | CDS | 77371930 | 77372026 | 77371930 | ID=cds.MS.gene69767.t1;Parent=MS.gene69767.t1 |
| chr3.4 | exon | 77373747 | 77373868 | 77373747 | ID=MS.gene69767.t1.exon6;Parent=MS.gene69767.t1 |
| chr3.4 | CDS | 77373747 | 77373868 | 77373747 | ID=cds.MS.gene69767.t1;Parent=MS.gene69767.t1 |
| chr3.4 | exon | 77373962 | 77374045 | 77373962 | ID=MS.gene69767.t1.exon7;Parent=MS.gene69767.t1 |
| chr3.4 | CDS | 77373962 | 77374045 | 77373962 | ID=cds.MS.gene69767.t1;Parent=MS.gene69767.t1 |
| chr3.4 | exon | 77374470 | 77374616 | 77374470 | ID=MS.gene69767.t1.exon8;Parent=MS.gene69767.t1 |
| chr3.4 | CDS | 77374470 | 77374616 | 77374470 | ID=cds.MS.gene69767.t1;Parent=MS.gene69767.t1 |
| chr3.4 | exon | 77374695 | 77374806 | 77374695 | ID=MS.gene69767.t1.exon9;Parent=MS.gene69767.t1 |
| chr3.4 | CDS | 77374695 | 77374806 | 77374695 | ID=cds.MS.gene69767.t1;Parent=MS.gene69767.t1 |
| chr3.4 | exon | 77374900 | 77375019 | 77374900 | ID=MS.gene69767.t1.exon10;Parent=MS.gene69767.t1 |
| chr3.4 | CDS | 77374900 | 77375019 | 77374900 | ID=cds.MS.gene69767.t1;Parent=MS.gene69767.t1 |
| chr3.4 | exon | 77375547 | 77375611 | 77375547 | ID=MS.gene69767.t1.exon11;Parent=MS.gene69767.t1 |
| chr3.4 | CDS | 77375547 | 77375611 | 77375547 | ID=cds.MS.gene69767.t1;Parent=MS.gene69767.t1 |
| Gene Sequence |
| Protein sequence |
