Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70001.t1 | XP_003629056.1 | 98.1 | 583 | 9 | 1 | 1 | 581 | 1 | 583 | 3.20E-289 | 1003.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70001.t1 | A0A0A1C930 | 68.4 | 601 | 163 | 9 | 1 | 581 | 1 | 594 | 1.3e-206 | 720.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70001.t1 | A9YVC5 | 98.1 | 583 | 9 | 1 | 1 | 581 | 1 | 583 | 2.3e-289 | 1003.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052702 | MS.gene70001 | 0.822431 | 2.38E-53 | -1.69E-46 |
| MS.gene056694 | MS.gene70001 | 0.807403 | 5.14E-50 | -1.69E-46 |
| MS.gene056697 | MS.gene70001 | 0.844682 | 6.50E-59 | -1.69E-46 |
| MS.gene058382 | MS.gene70001 | 0.808772 | 2.63E-50 | -1.69E-46 |
| MS.gene05926 | MS.gene70001 | 0.821775 | 3.37E-53 | -1.69E-46 |
| MS.gene05960 | MS.gene70001 | 0.801448 | 8.96E-49 | -1.69E-46 |
| MS.gene061044 | MS.gene70001 | 0.800905 | 1.16E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70001.t1 | MTR_8g072640 | 98.113 | 583 | 9 | 1 | 1 | 581 | 1 | 583 | 0.0 | 1165 |
| MS.gene70001.t1 | MTR_5g024880 | 76.543 | 567 | 107 | 5 | 22 | 581 | 20 | 567 | 0.0 | 877 |
| MS.gene70001.t1 | MTR_5g091050 | 74.699 | 581 | 111 | 6 | 1 | 581 | 1 | 545 | 0.0 | 862 |
| MS.gene70001.t1 | MTR_5g026500 | 78.558 | 541 | 94 | 4 | 43 | 581 | 30 | 550 | 0.0 | 858 |
| MS.gene70001.t1 | MTR_5g026450 | 78.108 | 539 | 97 | 3 | 43 | 581 | 25 | 542 | 0.0 | 854 |
| MS.gene70001.t1 | MTR_5g026460 | 78.108 | 539 | 97 | 3 | 43 | 581 | 25 | 542 | 0.0 | 854 |
| MS.gene70001.t1 | MTR_5g026430 | 78.108 | 539 | 97 | 3 | 43 | 581 | 25 | 542 | 0.0 | 854 |
| MS.gene70001.t1 | MTR_5g026480 | 78.108 | 539 | 97 | 3 | 43 | 581 | 25 | 542 | 0.0 | 854 |
| MS.gene70001.t1 | MTR_5g087550 | 70.408 | 588 | 144 | 5 | 1 | 581 | 1 | 565 | 0.0 | 797 |
| MS.gene70001.t1 | MTR_5g024880 | 74.590 | 488 | 98 | 5 | 22 | 502 | 20 | 488 | 0.0 | 736 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70001.t1 | AT1G76490 | 70.034 | 594 | 149 | 6 | 1 | 577 | 51 | 632 | 0.0 | 820 |
| MS.gene70001.t1 | AT2G17370 | 71.322 | 537 | 132 | 6 | 43 | 576 | 37 | 554 | 0.0 | 759 |
Find 163 sgRNAs with CRISPR-Local
Find 275 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCCTCCGCCGTTTACCTTCT+AGG | 0.154239 | 8.1:+32926174 | MS.gene70001:CDS |
| TGGTGGTGGTGGTAAGCTTC+TGG | 0.165541 | 8.1:-32925972 | None:intergenic |
| TGTAAAGCTATTCATGTTTC+TGG | 0.186633 | 8.1:+32926714 | MS.gene70001:CDS |
| GCAAGCTCACGAAACGATTT+TGG | 0.210048 | 8.1:-32929009 | None:intergenic |
| CAAATTCCGGTTGGTGTTGC+GGG | 0.266196 | 8.1:+32926609 | MS.gene70001:CDS |
| CTGGCAAGAATTTGTACATT+AGG | 0.277016 | 8.1:+32927883 | MS.gene70001:CDS |
| TTTGATTACGATTCGATATT+GGG | 0.293478 | 8.1:+32926555 | MS.gene70001:CDS |
| TCAGCGGTGCAAACGATAAC+TGG | 0.306795 | 8.1:+32926501 | MS.gene70001:CDS |
| GGTGGTGGTGGTAAGCTTCT+GGG | 0.324241 | 8.1:-32925971 | None:intergenic |
| TCAGCCCTTGCTGGTGCTCT+TGG | 0.329249 | 8.1:+32928310 | MS.gene70001:CDS |
| TTTGCAATTTCCTCGTCTTC+CGG | 0.344235 | 8.1:-32926396 | None:intergenic |
| AGAAAGCAGCGGCTGTAAAC+TGG | 0.347636 | 8.1:+32928164 | MS.gene70001:CDS |
| GTCTGCTAGTCTGGATTCTA+AGG | 0.347797 | 8.1:-32926451 | None:intergenic |
| TCTTAATTTACTTGGTGTTA+AGG | 0.349199 | 8.1:+32928830 | MS.gene70001:CDS |
| GATAGGGTTTGTTCAAATTC+CGG | 0.351442 | 8.1:+32926596 | MS.gene70001:CDS |
| TGACTAGAGCACCTGTTGTT+AGG | 0.353746 | 8.1:+32926769 | MS.gene70001:CDS |
| AATAGCTTTACACCCTCTAT+TGG | 0.356892 | 8.1:-32926703 | None:intergenic |
| GACGTATTGCCGCTGCTTTA+CGG | 0.359907 | 8.1:-32926476 | None:intergenic |
| CTTAATTTACTTGGTGTTAA+GGG | 0.362558 | 8.1:+32928831 | MS.gene70001:CDS |
| CTATTGGCCACCATTGTTGC+CGG | 0.367634 | 8.1:+32928888 | MS.gene70001:CDS |
| CTTCTAGGTTTCTTCGGTAT+CGG | 0.393361 | 8.1:+32926189 | MS.gene70001:CDS |
| CCCTTGCTGGTGCTCTTGGT+GGG | 0.400026 | 8.1:+32928314 | MS.gene70001:CDS |
| TTTACGGCAGTCTGCTAGTC+TGG | 0.401473 | 8.1:-32926460 | None:intergenic |
| AGCATTCAACCTACTATTGC+TGG | 0.403783 | 8.1:+32927864 | MS.gene70001:CDS |
| AACATGCTTAAGAACCTAAC+TGG | 0.404216 | 8.1:+32928286 | MS.gene70001:CDS |
| TTCTCCGGTGGTGGTGGTGG+TGG | 0.409726 | 8.1:-32925983 | None:intergenic |
| TACAGCCGCTGCTTTCTTGT+CGG | 0.410250 | 8.1:-32928158 | None:intergenic |
| ACAATTGGAGTTACCGTTGC+CGG | 0.414636 | 8.1:-32926327 | None:intergenic |
| GCCCTTGCTGGTGCTCTTGG+TGG | 0.414829 | 8.1:+32928313 | MS.gene70001:CDS |
| GGAGTTACCGTTGCCGGTGG+TGG | 0.417634 | 8.1:-32926321 | None:intergenic |
| CGGATCACGAACTTCCTTCC+CGG | 0.424473 | 8.1:+32926209 | MS.gene70001:CDS |
| CTAACTGGATCAGCCCTTGC+TGG | 0.430519 | 8.1:+32928301 | MS.gene70001:CDS |
| ATCTTCACCGGAGCTACAAT+TGG | 0.432713 | 8.1:-32926342 | None:intergenic |
| ATTAGGTTCCGTTGCAGTAC+AGG | 0.438518 | 8.1:+32927900 | MS.gene70001:CDS |
| AAGGTCCTTGCCATCATTCA+CGG | 0.439029 | 8.1:-32928440 | None:intergenic |
| ATAACTGGAAAATCTCTAGA+AGG | 0.440221 | 8.1:+32926516 | MS.gene70001:CDS |
| ATGGATGTCATTGGAATCTC+AGG | 0.445773 | 8.1:+32927999 | MS.gene70001:CDS |
| TCAGCTTGTCTTAATTTACT+TGG | 0.448427 | 8.1:+32928822 | MS.gene70001:CDS |
| GTTTACCTTCTAGGTTTCTT+CGG | 0.453882 | 8.1:+32926183 | MS.gene70001:CDS |
| CAGCAAGGGCTGATCCAGTT+AGG | 0.457590 | 8.1:-32928300 | None:intergenic |
| TCTTCATCGGAGAGATCATC+CGG | 0.461700 | 8.1:-32926228 | None:intergenic |
| GCGGCTGTAAACTGGATTGA+AGG | 0.463386 | 8.1:+32928172 | MS.gene70001:CDS |
| GTCACTAACGCTGTATTCTT+CGG | 0.463821 | 8.1:+32926036 | MS.gene70001:CDS |
| CTCATGTCTGCAATTGCAGC+TGG | 0.470089 | 8.1:+32928936 | MS.gene70001:CDS |
| CTCGCCCGCGAGTACTGAAC+CGG | 0.476229 | 8.1:-32928907 | None:intergenic |
| ATTCCAATGACATCCATGTC+AGG | 0.476477 | 8.1:-32927993 | None:intergenic |
| AGTGGACCCGCAACACCAAC+CGG | 0.478518 | 8.1:-32926615 | None:intergenic |
| AGTGCTGCTGGACACGGTCC+TGG | 0.480294 | 8.1:-32926279 | None:intergenic |
| TCAAATTCCGGTTGGTGTTG+CGG | 0.481667 | 8.1:+32926608 | MS.gene70001:CDS |
| CACTAATTTCTGTACCTCAA+TGG | 0.486090 | 8.1:-32928485 | None:intergenic |
| TCAGGTTGGTACTGTGGGAG+GGG | 0.488097 | 8.1:+32928779 | MS.gene70001:intron |
| ATAATTCAGGTTGGTACTGT+GGG | 0.489921 | 8.1:+32928774 | MS.gene70001:intron |
| TTCCCTGACATGGATGTCAT+TGG | 0.494706 | 8.1:+32927990 | MS.gene70001:CDS |
| AAATTCTTGCCAGCAATAGT+AGG | 0.494781 | 8.1:-32927873 | None:intergenic |
| TGCACCTGGAGATTCTGTGC+TGG | 0.497072 | 8.1:-32928856 | None:intergenic |
| AGGTGCAAATGCTAGGCTAT+TGG | 0.497308 | 8.1:+32928872 | MS.gene70001:CDS |
| CGATACCGAAGAAACCTAGA+AGG | 0.505448 | 8.1:-32926188 | None:intergenic |
| GAAGAAACCTAGAAGGTAAA+CGG | 0.508337 | 8.1:-32926181 | None:intergenic |
| GCCGACGAAAACCTAACAAC+AGG | 0.509711 | 8.1:-32926780 | None:intergenic |
| ATCATTCACGGGTTCCATCA+TGG | 0.511734 | 8.1:-32928428 | None:intergenic |
| ATCTCTAGAAGGTTTACCGT+TGG | 0.513091 | 8.1:+32926527 | MS.gene70001:CDS |
| AAAGAAGACTCGCGAAAACC+AGG | 0.514367 | 8.1:+32926261 | MS.gene70001:CDS |
| TCTTCTCACGCCAACGGTGG+AGG | 0.517024 | 8.1:-32926086 | None:intergenic |
| TGTCACTATGCCTTCCATTG+AGG | 0.518080 | 8.1:+32928471 | MS.gene70001:CDS |
| GGTGTGTGAGGCTGTTATTA+AGG | 0.520587 | 8.1:+32928210 | MS.gene70001:CDS |
| CTAGAAGGTTTACCGTTGGA+AGG | 0.521102 | 8.1:+32926531 | MS.gene70001:CDS |
| TCGGTGTCGACAAGTGCTGC+TGG | 0.521714 | 8.1:-32926291 | None:intergenic |
| GGAATACGACGGAATTGAAC+CGG | 0.526078 | 8.1:-32926430 | None:intergenic |
| TGTTGCGGGTCCACTGTTGT+TGG | 0.526588 | 8.1:+32926623 | MS.gene70001:CDS |
| CGTAAAACCACCACCGGCAA+CGG | 0.528134 | 8.1:+32926314 | MS.gene70001:CDS |
| GAACTCTCAACATTCTGAGC+AGG | 0.528481 | 8.1:-32928394 | None:intergenic |
| GGTAACTCCAATTGTAGCTC+CGG | 0.530278 | 8.1:+32926335 | MS.gene70001:CDS |
| AATCTCCAGGTGCAAATGCT+AGG | 0.530949 | 8.1:+32928865 | MS.gene70001:CDS |
| TCTTCCGGTGTTAGATTCAC+CGG | 0.530999 | 8.1:-32926381 | None:intergenic |
| ACCTAGAAGGTAAACGGCGG+AGG | 0.531795 | 8.1:-32926175 | None:intergenic |
| TGTCTACATAGCCACTGGTC+AGG | 0.531826 | 8.1:+32928369 | MS.gene70001:CDS |
| GGCGCCAGCACAGAATCTCC+AGG | 0.540230 | 8.1:+32928852 | MS.gene70001:CDS |
| TGCAGTACAGGTGATGCCAT+GGG | 0.544320 | 8.1:+32927912 | MS.gene70001:CDS |
| TGAAATACAACAGATCTAGC+AGG | 0.545624 | 8.1:+32928979 | MS.gene70001:CDS |
| TCGACAAGTGCTGCTGGACA+CGG | 0.546888 | 8.1:-32926285 | None:intergenic |
| GCGGGTCCACTGTTGTTGGA+TGG | 0.547013 | 8.1:+32926627 | MS.gene70001:CDS |
| TTCAGGTTGGTACTGTGGGA+GGG | 0.548296 | 8.1:+32928778 | MS.gene70001:intron |
| AGGTCCTTGCCATCATTCAC+GGG | 0.549056 | 8.1:-32928439 | None:intergenic |
| TTTAGCGAGAATCTCTTCAT+CGG | 0.551368 | 8.1:-32926241 | None:intergenic |
| TCAGAGTGACTTCCCTGACA+TGG | 0.551867 | 8.1:+32927980 | MS.gene70001:CDS |
| TCTGCTGTCTACATAGCCAC+TGG | 0.555493 | 8.1:+32928364 | MS.gene70001:CDS |
| CGGCTGTAAACTGGATTGAA+GGG | 0.559547 | 8.1:+32928173 | MS.gene70001:CDS |
| TTCTCACTGTATCACCATGA+TGG | 0.559728 | 8.1:+32928414 | MS.gene70001:CDS |
| CACCGACGTAAAACCACCAC+CGG | 0.559984 | 8.1:+32926308 | MS.gene70001:CDS |
| AGTGTTGTGAAATGCCGATA+GGG | 0.561600 | 8.1:+32926580 | MS.gene70001:CDS |
| CTTCCTCCACGTTCTCCCAC+CGG | 0.562240 | 8.1:+32925931 | MS.gene70001:CDS |
| TCGCCGCCGGTGGGAGAACG+TGG | 0.562513 | 8.1:-32925937 | None:intergenic |
| ATTCAGGTTGGTACTGTGGG+AGG | 0.563884 | 8.1:+32928777 | MS.gene70001:intron |
| ATGATGGAACCCGTGAATGA+TGG | 0.565081 | 8.1:+32928430 | MS.gene70001:CDS |
| AATAATTCAGGTTGGTACTG+TGG | 0.566379 | 8.1:+32928773 | MS.gene70001:intron |
| ACACCCTTCAGTGGTAGCCA+TGG | 0.566660 | 8.1:-32926667 | None:intergenic |
| AAAGCTATTCATGTTTCTGG+TGG | 0.566843 | 8.1:+32926717 | MS.gene70001:CDS |
| TGACACCATGTTCATCCCCA+TGG | 0.567983 | 8.1:-32927928 | None:intergenic |
| CAGGTTGGTACTGTGGGAGG+GGG | 0.569796 | 8.1:+32928780 | MS.gene70001:intron |
| CCCACCAAGAGCACCAGCAA+GGG | 0.572086 | 8.1:-32928314 | None:intergenic |
| TTGCAGTACAGGTGATGCCA+TGG | 0.575598 | 8.1:+32927911 | MS.gene70001:CDS |
| GAGACTGTGACGACATGAAG+AGG | 0.576532 | 8.1:-32926123 | None:intergenic |
| ACAACTTCATAGATCTTCAC+CGG | 0.578120 | 8.1:-32926354 | None:intergenic |
| GTGCCCATGGCTACCACTGA+AGG | 0.579062 | 8.1:+32926663 | MS.gene70001:CDS |
| AATTTCTGTACCTCAATGGA+AGG | 0.582480 | 8.1:-32928481 | None:intergenic |
| ATTGCAAAATCAGTTGTCAC+CGG | 0.584238 | 8.1:+32926411 | MS.gene70001:CDS |
| CAGTGTTGTGAAATGCCGAT+AGG | 0.585519 | 8.1:+32926579 | MS.gene70001:CDS |
| TACGGATCTTCTCACGCCAA+CGG | 0.588503 | 8.1:-32926092 | None:intergenic |
| GAATCTAACACCGGAAGACG+AGG | 0.588627 | 8.1:+32926386 | MS.gene70001:CDS |
| GGCTGTTATTAAGGAAGAGG+TGG | 0.590912 | 8.1:+32928219 | MS.gene70001:CDS |
| CACCCTTCAGTGGTAGCCAT+GGG | 0.593635 | 8.1:-32926666 | None:intergenic |
| GAAAGTGTTGAAGACTAGTG+TGG | 0.595958 | 8.1:+32928246 | MS.gene70001:CDS |
| TGAGGCTGTTATTAAGGAAG+AGG | 0.596038 | 8.1:+32928216 | MS.gene70001:CDS |
| AGCGGCAATACGTCGTTCAG+CGG | 0.596258 | 8.1:+32926485 | MS.gene70001:CDS |
| TGTTGCCGGTTCAGTACTCG+CGG | 0.597162 | 8.1:+32928902 | MS.gene70001:CDS |
| CTTGTTGCAAGTACCAATAG+AGG | 0.597773 | 8.1:+32926690 | MS.gene70001:CDS |
| GGGATGAACATGGTGTCAAA+AGG | 0.598387 | 8.1:+32927933 | MS.gene70001:CDS |
| GGGTTTGTTCAAATTCCGGT+TGG | 0.602041 | 8.1:+32926600 | MS.gene70001:CDS |
| GAGTACTGAACCGGCAACAA+TGG | 0.603695 | 8.1:-32928898 | None:intergenic |
| GGAATTTGAACAAACCCTAT+CGG | 0.606204 | 8.1:-32926594 | None:intergenic |
| TGGCATCACCTGTACTGCAA+CGG | 0.607862 | 8.1:-32927908 | None:intergenic |
| TACTGAACCGGCAACAATGG+TGG | 0.608927 | 8.1:-32928895 | None:intergenic |
| GAGGAAGAGATTTAAGTCTC+CGG | 0.609171 | 8.1:-32925915 | None:intergenic |
| GCAAGTGTATCAAAATTAAG+CGG | 0.609171 | 8.1:-32926840 | None:intergenic |
| AGTCACTCTGAAGAAAATCA+AGG | 0.609778 | 8.1:-32927968 | None:intergenic |
| AGCAGACTGCCGTAAAGCAG+CGG | 0.609800 | 8.1:+32926467 | MS.gene70001:CDS |
| GTAAACTGGATTGAAGGGCG+TGG | 0.612589 | 8.1:+32928178 | MS.gene70001:CDS |
| AATAGCCTAGCATTTGCACC+TGG | 0.614511 | 8.1:-32928870 | None:intergenic |
| TTCCAATGACATCCATGTCA+GGG | 0.618523 | 8.1:-32927992 | None:intergenic |
| ATTGGAGTTACCGTTGCCGG+TGG | 0.621066 | 8.1:-32926324 | None:intergenic |
| TGCCCATGGCTACCACTGAA+GGG | 0.628203 | 8.1:+32926664 | MS.gene70001:CDS |
| GATCTATGAAGTTGTTGCAC+CGG | 0.629263 | 8.1:+32926362 | MS.gene70001:CDS |
| GCATAGTGACAGAAATGTGA+AGG | 0.633024 | 8.1:-32928459 | None:intergenic |
| GAAATACAACAGATCTAGCA+GGG | 0.634441 | 8.1:+32928980 | MS.gene70001:CDS |
| ATCGGAGAGATCATCCGGGA+AGG | 0.638459 | 8.1:-32926223 | None:intergenic |
| GTTGCCGGTTCAGTACTCGC+GGG | 0.640246 | 8.1:+32928903 | MS.gene70001:CDS |
| ACCCACCAAGAGCACCAGCA+AGG | 0.640374 | 8.1:-32928315 | None:intergenic |
| CTGTTCCGACAAGAAAGCAG+CGG | 0.643635 | 8.1:+32928153 | MS.gene70001:CDS |
| TGCAACAAGACACCCTTCAG+TGG | 0.643810 | 8.1:-32926676 | None:intergenic |
| TATAAGAGAAACGATGGCGG+CGG | 0.644367 | 8.1:-32926151 | None:intergenic |
| TGGTAAGTCTGTGGTGTGTG+AGG | 0.646294 | 8.1:+32928198 | MS.gene70001:CDS |
| GGATCTTCTCACGCCAACGG+TGG | 0.648620 | 8.1:-32926089 | None:intergenic |
| TTGTTGCAAGTACCAATAGA+GGG | 0.651666 | 8.1:+32926691 | MS.gene70001:CDS |
| TGATGCCATGGGGATGAACA+TGG | 0.657109 | 8.1:+32927923 | MS.gene70001:CDS |
| GGAGGCTATAAGAGAAACGA+TGG | 0.663583 | 8.1:-32926157 | None:intergenic |
| AGTTGAGTACACTGTGCCCA+TGG | 0.665357 | 8.1:+32926650 | MS.gene70001:CDS |
| CATGAAGAGGAGTTTCCGTA+CGG | 0.667785 | 8.1:-32926110 | None:intergenic |
| TCGTAATCAAAACCTTCCAA+CGG | 0.671722 | 8.1:-32926543 | None:intergenic |
| GGAACCCGTGAATGATGGCA+AGG | 0.672840 | 8.1:+32928435 | MS.gene70001:CDS |
| GGCTATAAGAGAAACGATGG+CGG | 0.673455 | 8.1:-32926154 | None:intergenic |
| CTTCATCGGAGAGATCATCC+GGG | 0.673784 | 8.1:-32926227 | None:intergenic |
| TGAAGGGCGTGGTAAGTCTG+TGG | 0.674377 | 8.1:+32928189 | MS.gene70001:CDS |
| CCGCCGGTGGGAGAACGTGG+AGG | 0.675831 | 8.1:-32925934 | None:intergenic |
| CTGGATTCTAAGGAATACGA+CGG | 0.686525 | 8.1:-32926441 | None:intergenic |
| TTGGCGTGAGAAGATCCGTA+CGG | 0.687150 | 8.1:+32926095 | MS.gene70001:CDS |
| TCAACTCCATCCAACAACAG+TGG | 0.690537 | 8.1:-32926633 | None:intergenic |
| CTGAGCAGGATCCTGACCAG+TGG | 0.691176 | 8.1:-32928380 | None:intergenic |
| AGTGTTGAAGACTAGTGTGG+AGG | 0.700194 | 8.1:+32928249 | MS.gene70001:CDS |
| TGCACCGGTGAATCTAACAC+CGG | 0.704033 | 8.1:+32926377 | MS.gene70001:CDS |
| GTGGAGGAGAAAATACGCGA+CGG | 0.712614 | 8.1:-32926070 | None:intergenic |
| CCTCCACGTTCTCCCACCGG+CGG | 0.718861 | 8.1:+32925934 | MS.gene70001:CDS |
| GCAGTACAGGTGATGCCATG+GGG | 0.741771 | 8.1:+32927913 | MS.gene70001:CDS |
| GAAACCTAGAAGGTAAACGG+CGG | 0.781690 | 8.1:-32926178 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATGTTTATTTAATTCCAAA+GGG | - | chr8.1:32928513-32928532 | None:intergenic | 15.0% |
| !! | TCATTCATTAACAATTTAAT+GGG | + | chr8.1:32927807-32927826 | MS.gene70001:intron | 15.0% |
| !! | TTATGTTTATTTAATTCCAA+AGG | - | chr8.1:32928514-32928533 | None:intergenic | 15.0% |
| !! | TTCATTCATTAACAATTTAA+TGG | + | chr8.1:32927806-32927825 | MS.gene70001:intron | 15.0% |
| !!! | TAGATTTTGTTTAATAATTC+AGG | + | chr8.1:32928761-32928780 | MS.gene70001:intron | 15.0% |
| !! | ATATTTATAAGCAAGTTTAG+GGG | + | chr8.1:32928679-32928698 | MS.gene70001:intron | 20.0% |
| !! | CATAGATATGAAATGATTTA+GGG | + | chr8.1:32927202-32927221 | MS.gene70001:intron | 20.0% |
| !! | CATATTTATAAGCAAGTTTA+GGG | + | chr8.1:32928678-32928697 | MS.gene70001:intron | 20.0% |
| !! | TATTAAACAAAATCTAGCTA+AGG | - | chr8.1:32928757-32928776 | None:intergenic | 20.0% |
| !! | TCATAGATATGAAATGATTT+AGG | + | chr8.1:32927201-32927220 | MS.gene70001:intron | 20.0% |
| !!! | ATTTTATCTTGTAGGAAATT+AGG | + | chr8.1:32927233-32927252 | MS.gene70001:intron | 20.0% |
| !!! | TCAAACTTTTGTTAAAATCA+AGG | + | chr8.1:32927456-32927475 | MS.gene70001:intron | 20.0% |
| !!! | TTTTAACAAAAGTTTGACTT+TGG | - | chr8.1:32927453-32927472 | None:intergenic | 20.0% |
| !!! | TTTTGTTTAATAATTCAGGT+TGG | + | chr8.1:32928765-32928784 | MS.gene70001:intron | 20.0% |
| ! | AATAGGATCCAATTTATAGA+GGG | + | chr8.1:32927683-32927702 | MS.gene70001:intron | 25.0% |
| ! | AATGTTTGTCTTTGATCAAA+TGG | + | chr8.1:32927321-32927340 | MS.gene70001:intron | 25.0% |
| ! | ATATCTATGAAGCACAAATA+CGG | - | chr8.1:32927191-32927210 | None:intergenic | 25.0% |
| ! | GCATATTTATAAGCAAGTTT+AGG | + | chr8.1:32928677-32928696 | MS.gene70001:intron | 25.0% |
| ! | TAGCTAAGGATACAATAAAA+TGG | - | chr8.1:32928743-32928762 | None:intergenic | 25.0% |
| ! | TTTGATTACGATTCGATATT+GGG | + | chr8.1:32926555-32926574 | MS.gene70001:CDS | 25.0% |
| !! | ACTTTTGGATTTTATCTTGT+AGG | + | chr8.1:32927225-32927244 | MS.gene70001:intron | 25.0% |
| !! | TTTTCAATTCAACCATAACA+AGG | - | chr8.1:32928081-32928100 | None:intergenic | 25.0% |
| !! | TTTTCTACTACATGTATGTT+TGG | - | chr8.1:32928585-32928604 | None:intergenic | 25.0% |
| !!! | CTTAATTTACTTGGTGTTAA+GGG | + | chr8.1:32928831-32928850 | MS.gene70001:CDS | 25.0% |
| !!! | TCTTAATTTACTTGGTGTTA+AGG | + | chr8.1:32928830-32928849 | MS.gene70001:CDS | 25.0% |
| !!! | TTTTGATTACGATTCGATAT+TGG | + | chr8.1:32926554-32926573 | MS.gene70001:CDS | 25.0% |
| AAGAAGAGCGAAAATATGTT+TGG | + | chr8.1:32927376-32927395 | MS.gene70001:intron | 30.0% | |
| ATAACTGGAAAATCTCTAGA+AGG | + | chr8.1:32926516-32926535 | MS.gene70001:CDS | 30.0% | |
| CAATAGGATCCAATTTATAG+AGG | + | chr8.1:32927682-32927701 | MS.gene70001:intron | 30.0% | |
| CGAGGTTGTTCAATTAAAAT+GGG | + | chr8.1:32927767-32927786 | MS.gene70001:intron | 30.0% | |
| GCAAGTGTATCAAAATTAAG+CGG | - | chr8.1:32926843-32926862 | None:intergenic | 30.0% | |
| TATGGAGAGGATCTATAATT+AGG | + | chr8.1:32927545-32927564 | MS.gene70001:intron | 30.0% | |
| TCAGCTTGTCTTAATTTACT+TGG | + | chr8.1:32928822-32928841 | MS.gene70001:CDS | 30.0% | |
| TCTCAAATTATTAGCAGTGT+CGG | + | chr8.1:32927136-32927155 | MS.gene70001:intron | 30.0% | |
| TGATATGAAACTATGAAGCA+TGG | + | chr8.1:32926988-32927007 | MS.gene70001:intron | 30.0% | |
| TGTAAAGCTATTCATGTTTC+TGG | + | chr8.1:32926714-32926733 | MS.gene70001:CDS | 30.0% | |
| TTAGGGGAGCTAAATTAAAA+GGG | + | chr8.1:32928695-32928714 | MS.gene70001:intron | 30.0% | |
| TTGAAAAAGAAAACCATGCT+CGG | - | chr8.1:32928640-32928659 | None:intergenic | 30.0% | |
| TTGCGTTATGAGTTATTAGT+AGG | + | chr8.1:32926935-32926954 | MS.gene70001:intron | 30.0% | |
| TTTAGGGGAGCTAAATTAAA+AGG | + | chr8.1:32928694-32928713 | MS.gene70001:intron | 30.0% | |
| ! | TGAAATGATTTAGGGACTTT+TGG | + | chr8.1:32927210-32927229 | MS.gene70001:intron | 30.0% |
| ! | TGAGGTTTATAGAATGCTTT+TGG | + | chr8.1:32927629-32927648 | MS.gene70001:intron | 30.0% |
| ! | TTAGTTCTTAGATTAACCTG+AGG | + | chr8.1:32927611-32927630 | MS.gene70001:intron | 30.0% |
| !! | AAAAGCATTCTATAAACCTC+AGG | - | chr8.1:32927630-32927649 | None:intergenic | 30.0% |
| !!! | CCATTTTAATTGAACAACCT+CGG | - | chr8.1:32927769-32927788 | None:intergenic | 30.0% |
| AAAACAACTGTTTGTCGAAG+AGG | - | chr8.1:32927578-32927597 | None:intergenic | 35.0% | |
| AAATTCTTGCCAGCAATAGT+AGG | - | chr8.1:32927876-32927895 | None:intergenic | 35.0% | |
| AACATGCTTAAGAACCTAAC+TGG | + | chr8.1:32928286-32928305 | MS.gene70001:CDS | 35.0% | |
| AATTTCTGTACCTCAATGGA+AGG | - | chr8.1:32928484-32928503 | None:intergenic | 35.0% | |
| ACAACTTCATAGATCTTCAC+CGG | - | chr8.1:32926357-32926376 | None:intergenic | 35.0% | |
| ATCCAATTTATAGAGGGATG+AGG | + | chr8.1:32927689-32927708 | MS.gene70001:intron | 35.0% | |
| ATTGCAAAATCAGTTGTCAC+CGG | + | chr8.1:32926411-32926430 | MS.gene70001:CDS | 35.0% | |
| CAATATCCATATTGTGTCCA+GGG | + | chr8.1:32927164-32927183 | MS.gene70001:intron | 35.0% | |
| CACTAATTTCTGTACCTCAA+TGG | - | chr8.1:32928488-32928507 | None:intergenic | 35.0% | |
| CATTGAGGTACAGAAATTAG+TGG | + | chr8.1:32928486-32928505 | MS.gene70001:intron | 35.0% | |
| CCGAGGTTGTTCAATTAAAA+TGG | + | chr8.1:32927766-32927785 | MS.gene70001:intron | 35.0% | |
| CTGGCAAGAATTTGTACATT+AGG | + | chr8.1:32927883-32927902 | MS.gene70001:CDS | 35.0% | |
| GAAATACAACAGATCTAGCA+GGG | + | chr8.1:32928980-32928999 | MS.gene70001:CDS | 35.0% | |
| GAAGAAACCTAGAAGGTAAA+CGG | - | chr8.1:32926184-32926203 | None:intergenic | 35.0% | |
| GGAATTTGAACAAACCCTAT+CGG | - | chr8.1:32926597-32926616 | None:intergenic | 35.0% | |
| GTTAGTGACACAGAGAAAAA+CGG | - | chr8.1:32926025-32926044 | None:intergenic | 35.0% | |
| GTTTACCTTCTAGGTTTCTT+CGG | + | chr8.1:32926183-32926202 | MS.gene70001:CDS | 35.0% | |
| TCAATATCCATATTGTGTCC+AGG | + | chr8.1:32927163-32927182 | MS.gene70001:intron | 35.0% | |
| TCGTAATCAAAACCTTCCAA+CGG | - | chr8.1:32926546-32926565 | None:intergenic | 35.0% | |
| TGAAATACAACAGATCTAGC+AGG | + | chr8.1:32928979-32928998 | MS.gene70001:CDS | 35.0% | |
| TGATCCCTTGCAACATTATT+GGG | - | chr8.1:32927347-32927366 | None:intergenic | 35.0% | |
| TTGATCCCTTGCAACATTAT+TGG | - | chr8.1:32927348-32927367 | None:intergenic | 35.0% | |
| TTGTTGCAAGTACCAATAGA+GGG | + | chr8.1:32926691-32926710 | MS.gene70001:CDS | 35.0% | |
| TTTAGCGAGAATCTCTTCAT+CGG | - | chr8.1:32926244-32926263 | None:intergenic | 35.0% | |
| ! | AATAGCTTTACACCCTCTAT+TGG | - | chr8.1:32926706-32926725 | None:intergenic | 35.0% |
| ! | AATGTTTTCATGCACACTGT+TGG | + | chr8.1:32928109-32928128 | MS.gene70001:intron | 35.0% |
| ! | ACCATAACAAGGACAGTTTT+AGG | - | chr8.1:32928070-32928089 | None:intergenic | 35.0% |
| ! | AGTCACTCTGAAGAAAATCA+AGG | - | chr8.1:32927971-32927990 | None:intergenic | 35.0% |
| ! | GATAGGGTTTGTTCAAATTC+CGG | + | chr8.1:32926596-32926615 | MS.gene70001:CDS | 35.0% |
| ! | TCTTCTGTTTTGCTTAGAGA+TGG | + | chr8.1:32926744-32926763 | MS.gene70001:CDS | 35.0% |
| ! | TCTTGTAGGAAATTAGGTTG+AGG | + | chr8.1:32927239-32927258 | MS.gene70001:intron | 35.0% |
| ! | TTTGGAGCTTCACAAAATCA+TGG | - | chr8.1:32927435-32927454 | None:intergenic | 35.0% |
| !! | AAAGCTATTCATGTTTCTGG+TGG | + | chr8.1:32926717-32926736 | MS.gene70001:CDS | 35.0% |
| !! | AATAATTCAGGTTGGTACTG+TGG | + | chr8.1:32928773-32928792 | MS.gene70001:intron | 35.0% |
| !! | ACAATTTAATGGGTTTGTGC+AGG | + | chr8.1:32927817-32927836 | MS.gene70001:intron | 35.0% |
| !! | ATAATTCAGGTTGGTACTGT+GGG | + | chr8.1:32928774-32928793 | MS.gene70001:intron | 35.0% |
| !! | CTTGTAGGAAATTAGGTTGA+GGG | + | chr8.1:32927240-32927259 | MS.gene70001:intron | 35.0% |
| !! | TGAGGGATTTGTTGATTGAA+TGG | + | chr8.1:32927257-32927276 | MS.gene70001:intron | 35.0% |
| !! | TGCTGAGTTGAAGTTTTTCT+TGG | + | chr8.1:32926812-32926831 | MS.gene70001:CDS | 35.0% |
| !!! | CTGTTTTTTAAGAATTGCCG+AGG | + | chr8.1:32927749-32927768 | MS.gene70001:intron | 35.0% |
| AATGGCCCAATAATGTTGCA+AGG | + | chr8.1:32927339-32927358 | MS.gene70001:intron | 40.0% | |
| ACAGAAATTAGTGGTCCCTT+TGG | + | chr8.1:32928495-32928514 | MS.gene70001:intron | 40.0% | |
| AGCATTCAACCTACTATTGC+TGG | + | chr8.1:32927864-32927883 | MS.gene70001:CDS | 40.0% | |
| AGTGTTGTGAAATGCCGATA+GGG | + | chr8.1:32926580-32926599 | MS.gene70001:CDS | 40.0% | |
| ATAGAGGGATGAGGTCATAT+AGG | + | chr8.1:32927698-32927717 | MS.gene70001:intron | 40.0% | |
| ATCATGTGTCAGTGTCATGT+CGG | - | chr8.1:32927067-32927086 | None:intergenic | 40.0% | |
| ATGGATGTCATTGGAATCTC+AGG | + | chr8.1:32927999-32928018 | MS.gene70001:CDS | 40.0% | |
| ATGGCCCAATAATGTTGCAA+GGG | + | chr8.1:32927340-32927359 | MS.gene70001:intron | 40.0% | |
| ATTCCAATGACATCCATGTC+AGG | - | chr8.1:32927996-32928015 | None:intergenic | 40.0% | |
| ATTGAATGGATCCCTTGCAA+GGG | + | chr8.1:32927271-32927290 | MS.gene70001:intron | 40.0% | |
| CTTCTAGGTTTCTTCGGTAT+CGG | + | chr8.1:32926189-32926208 | MS.gene70001:CDS | 40.0% | |
| CTTGTTGCAAGTACCAATAG+AGG | + | chr8.1:32926690-32926709 | MS.gene70001:CDS | 40.0% | |
| GACCTCATCCCTCTATAAAT+TGG | - | chr8.1:32927694-32927713 | None:intergenic | 40.0% | |
| GAGGAAGAGATTTAAGTCTC+CGG | - | chr8.1:32925918-32925937 | None:intergenic | 40.0% | |
| GATCTATGAAGTTGTTGCAC+CGG | + | chr8.1:32926362-32926381 | MS.gene70001:CDS | 40.0% | |
| GCATAGTGACAGAAATGTGA+AGG | - | chr8.1:32928462-32928481 | None:intergenic | 40.0% | |
| GCCTAAAACTGTCCTTGTTA+TGG | + | chr8.1:32928066-32928085 | MS.gene70001:intron | 40.0% | |
| GTCACTAACGCTGTATTCTT+CGG | + | chr8.1:32926036-32926055 | MS.gene70001:CDS | 40.0% | |
| TAAAGAGGGACAATATGGAG+AGG | + | chr8.1:32927532-32927551 | MS.gene70001:intron | 40.0% | |
| TGAGGCTGTTATTAAGGAAG+AGG | + | chr8.1:32928216-32928235 | MS.gene70001:CDS | 40.0% | |
| TTCCAATGACATCCATGTCA+GGG | - | chr8.1:32927995-32928014 | None:intergenic | 40.0% | |
| TTCTCACTGTATCACCATGA+TGG | + | chr8.1:32928414-32928433 | MS.gene70001:CDS | 40.0% | |
| TTTGCAATTTCCTCGTCTTC+CGG | - | chr8.1:32926399-32926418 | None:intergenic | 40.0% | |
| ! | ACCTGTTGTTAGGTTTTCGT+CGG | + | chr8.1:32926779-32926798 | MS.gene70001:CDS | 40.0% |
| ! | ATCTCTAGAAGGTTTACCGT+TGG | + | chr8.1:32926527-32926546 | MS.gene70001:CDS | 40.0% |
| ! | CTGGATTCTAAGGAATACGA+CGG | - | chr8.1:32926444-32926463 | None:intergenic | 40.0% |
| ! | TTTCATGCACACTGTTGGTT+TGG | + | chr8.1:32928114-32928133 | MS.gene70001:intron | 40.0% |
| !! | GAAAGTGTTGAAGACTAGTG+TGG | + | chr8.1:32928246-32928265 | MS.gene70001:CDS | 40.0% |
| AAAGAAGACTCGCGAAAACC+AGG | + | chr8.1:32926261-32926280 | MS.gene70001:CDS | 45.0% | |
| AACATGGAGAGGGGATAAAG+AGG | + | chr8.1:32927517-32927536 | MS.gene70001:intron | 45.0% | |
| AAGGTCCTTGCCATCATTCA+CGG | - | chr8.1:32928443-32928462 | None:intergenic | 45.0% | |
| AATAGCCTAGCATTTGCACC+TGG | - | chr8.1:32928873-32928892 | None:intergenic | 45.0% | |
| AATCTCCAGGTGCAAATGCT+AGG | + | chr8.1:32928865-32928884 | MS.gene70001:CDS | 45.0% | |
| ACAATTGGAGTTACCGTTGC+CGG | - | chr8.1:32926330-32926349 | None:intergenic | 45.0% | |
| ACATGGAGAGGGGATAAAGA+GGG | + | chr8.1:32927518-32927537 | MS.gene70001:intron | 45.0% | |
| ACCATAACACGCCTAACCTA+AGG | - | chr8.1:32927019-32927038 | None:intergenic | 45.0% | |
| AGAAAACCATGCTCGGTAGT+TGG | - | chr8.1:32928633-32928652 | None:intergenic | 45.0% | |
| AGGTGCAAATGCTAGGCTAT+TGG | + | chr8.1:32928872-32928891 | MS.gene70001:CDS | 45.0% | |
| ATCATTCACGGGTTCCATCA+TGG | - | chr8.1:32928431-32928450 | None:intergenic | 45.0% | |
| ATCTTCACCGGAGCTACAAT+TGG | - | chr8.1:32926345-32926364 | None:intergenic | 45.0% | |
| ATGAAGCATGGACACTCCTT+AGG | + | chr8.1:32927000-32927019 | MS.gene70001:intron | 45.0% | |
| ATTAGGTTCCGTTGCAGTAC+AGG | + | chr8.1:32927900-32927919 | MS.gene70001:CDS | 45.0% | |
| CAGTGTTGTGAAATGCCGAT+AGG | + | chr8.1:32926579-32926598 | MS.gene70001:CDS | 45.0% | |
| CATGAAGAGGAGTTTCCGTA+CGG | - | chr8.1:32926113-32926132 | None:intergenic | 45.0% | |
| CGATACCGAAGAAACCTAGA+AGG | - | chr8.1:32926191-32926210 | None:intergenic | 45.0% | |
| CGGCTGTAAACTGGATTGAA+GGG | + | chr8.1:32928173-32928192 | MS.gene70001:CDS | 45.0% | |
| CTAGAAGGTTTACCGTTGGA+AGG | + | chr8.1:32926531-32926550 | MS.gene70001:CDS | 45.0% | |
| CTTTATCCCCTCTCCATGTT+TGG | - | chr8.1:32927517-32927536 | None:intergenic | 45.0% | |
| GAAACCTAGAAGGTAAACGG+CGG | - | chr8.1:32926181-32926200 | None:intergenic | 45.0% | |
| GAACTCTCAACATTCTGAGC+AGG | - | chr8.1:32928397-32928416 | None:intergenic | 45.0% | |
| GATTGAATGGATCCCTTGCA+AGG | + | chr8.1:32927270-32927289 | MS.gene70001:intron | 45.0% | |
| GGAATACGACGGAATTGAAC+CGG | - | chr8.1:32926433-32926452 | None:intergenic | 45.0% | |
| GGAGGCTATAAGAGAAACGA+TGG | - | chr8.1:32926160-32926179 | None:intergenic | 45.0% | |
| GGCTATAAGAGAAACGATGG+CGG | - | chr8.1:32926157-32926176 | None:intergenic | 45.0% | |
| GGCTGTTATTAAGGAAGAGG+TGG | + | chr8.1:32928219-32928238 | MS.gene70001:CDS | 45.0% | |
| GGGGATAAAGAGGGACAATA+TGG | + | chr8.1:32927527-32927546 | MS.gene70001:intron | 45.0% | |
| GGTAACTCCAATTGTAGCTC+CGG | + | chr8.1:32926335-32926354 | MS.gene70001:CDS | 45.0% | |
| GGTGTGTGAGGCTGTTATTA+AGG | + | chr8.1:32928210-32928229 | MS.gene70001:CDS | 45.0% | |
| GTGACACAGAGAAAAACGGT+CGG | - | chr8.1:32926021-32926040 | None:intergenic | 45.0% | |
| GTTTGGATTGATCGCGAGTT+TGG | + | chr8.1:32927393-32927412 | MS.gene70001:intron | 45.0% | |
| TCAACTCCATCCAACAACAG+TGG | - | chr8.1:32926636-32926655 | None:intergenic | 45.0% | |
| TCCTTAGGTTAGGCGTGTTA+TGG | + | chr8.1:32927015-32927034 | MS.gene70001:intron | 45.0% | |
| TCTCACTGCCATTCCAAACA+TGG | + | chr8.1:32927501-32927520 | MS.gene70001:intron | 45.0% | |
| TCTTCATCGGAGAGATCATC+CGG | - | chr8.1:32926231-32926250 | None:intergenic | 45.0% | |
| TGCCATTCCAAACATGGAGA+GGG | + | chr8.1:32927507-32927526 | MS.gene70001:intron | 45.0% | |
| TGTCACTATGCCTTCCATTG+AGG | + | chr8.1:32928471-32928490 | MS.gene70001:CDS | 45.0% | |
| TTCCCTGACATGGATGTCAT+TGG | + | chr8.1:32927990-32928009 | MS.gene70001:CDS | 45.0% | |
| TTGCGGATGAAGAGGTCAAT+AGG | + | chr8.1:32927666-32927685 | MS.gene70001:intron | 45.0% | |
| ! | AGTGTTGAAGACTAGTGTGG+AGG | + | chr8.1:32928249-32928268 | MS.gene70001:CDS | 45.0% |
| ! | ATGATGGAACCCGTGAATGA+TGG | + | chr8.1:32928430-32928449 | MS.gene70001:CDS | 45.0% |
| ! | GGGATGAACATGGTGTCAAA+AGG | + | chr8.1:32927933-32927952 | MS.gene70001:CDS | 45.0% |
| ! | GGGTTTGTTCAAATTCCGGT+TGG | + | chr8.1:32926600-32926619 | MS.gene70001:CDS | 45.0% |
| ! | GTCTGCTAGTCTGGATTCTA+AGG | - | chr8.1:32926454-32926473 | None:intergenic | 45.0% |
| ! | TAGAATGCTTTTGGCCGTTG+TGG | + | chr8.1:32927638-32927657 | MS.gene70001:intron | 45.0% |
| ! | TATAAGAGAAACGATGGCGG+CGG | - | chr8.1:32926154-32926173 | None:intergenic | 45.0% |
| ! | TCTTCCGGTGTTAGATTCAC+CGG | - | chr8.1:32926384-32926403 | None:intergenic | 45.0% |
| ! | TGACTAGAGCACCTGTTGTT+AGG | + | chr8.1:32926769-32926788 | MS.gene70001:CDS | 45.0% |
| ! | TGGTAAGCTTCTGGGTTTTG+AGG | - | chr8.1:32925966-32925985 | None:intergenic | 45.0% |
| !! | ACTGTTGGTTTGGTTATGGC+AGG | + | chr8.1:32928124-32928143 | MS.gene70001:intron | 45.0% |
| !! | GCACACTGTTGGTTTGGTTA+TGG | + | chr8.1:32928120-32928139 | MS.gene70001:intron | 45.0% |
| !! | TCAAATTCCGGTTGGTGTTG+CGG | + | chr8.1:32926608-32926627 | MS.gene70001:CDS | 45.0% |
| AGAAAGCAGCGGCTGTAAAC+TGG | + | chr8.1:32928164-32928183 | MS.gene70001:CDS | 50.0% | |
| AGGTCCTTGCCATCATTCAC+GGG | - | chr8.1:32928442-32928461 | None:intergenic | 50.0% | |
| AGTTGAGTACACTGTGCCCA+TGG | + | chr8.1:32926650-32926669 | MS.gene70001:CDS | 50.0% | |
| CATCCGCAACTACTCCACAA+CGG | - | chr8.1:32927655-32927674 | None:intergenic | 50.0% | |
| CTACAACCAACTACCGAGCA+TGG | + | chr8.1:32928624-32928643 | MS.gene70001:intron | 50.0% | |
| CTATTGGCCACCATTGTTGC+CGG | + | chr8.1:32928888-32928907 | MS.gene70001:CDS | 50.0% | |
| CTCATGTCTGCAATTGCAGC+TGG | + | chr8.1:32928936-32928955 | MS.gene70001:CDS | 50.0% | |
| CTGCCATTCCAAACATGGAG+AGG | + | chr8.1:32927506-32927525 | MS.gene70001:intron | 50.0% | |
| CTGTTCCGACAAGAAAGCAG+CGG | + | chr8.1:32928153-32928172 | MS.gene70001:CDS | 50.0% | |
| CTTCATCGGAGAGATCATCC+GGG | - | chr8.1:32926230-32926249 | None:intergenic | 50.0% | |
| GAAAAACGGTCGGTGAAGTG+AGG | - | chr8.1:32926011-32926030 | None:intergenic | 50.0% | |
| GAATCTAACACCGGAAGACG+AGG | + | chr8.1:32926386-32926405 | MS.gene70001:CDS | 50.0% | |
| GAGACTGTGACGACATGAAG+AGG | - | chr8.1:32926126-32926145 | None:intergenic | 50.0% | |
| GCATGGACACTCCTTAGGTT+AGG | + | chr8.1:32927005-32927024 | MS.gene70001:intron | 50.0% | |
| GCCATTCCAAACATGGAGAG+GGG | + | chr8.1:32927508-32927527 | MS.gene70001:intron | 50.0% | |
| GCCGACGAAAACCTAACAAC+AGG | - | chr8.1:32926783-32926802 | None:intergenic | 50.0% | |
| GCGGCTGTAAACTGGATTGA+AGG | + | chr8.1:32928172-32928191 | MS.gene70001:CDS | 50.0% | |
| GTAAACTGGATTGAAGGGCG+TGG | + | chr8.1:32928178-32928197 | MS.gene70001:CDS | 50.0% | |
| GTGGAGGAGAAAATACGCGA+CGG | - | chr8.1:32926073-32926092 | None:intergenic | 50.0% | |
| TACGGACCCTGGACACAATA+TGG | - | chr8.1:32927173-32927192 | None:intergenic | 50.0% | |
| TACGGATCTTCTCACGCCAA+CGG | - | chr8.1:32926095-32926114 | None:intergenic | 50.0% | |
| TACTGAACCGGCAACAATGG+TGG | - | chr8.1:32928898-32928917 | None:intergenic | 50.0% | |
| TCAGAGTGACTTCCCTGACA+TGG | + | chr8.1:32927980-32927999 | MS.gene70001:CDS | 50.0% | |
| TCAGCGGTGCAAACGATAAC+TGG | + | chr8.1:32926501-32926520 | MS.gene70001:CDS | 50.0% | |
| TCCCCTCTCCATGTTTGGAA+TGG | - | chr8.1:32927512-32927531 | None:intergenic | 50.0% | |
| TCGCGAGTTTGGCTAAGTCA+TGG | + | chr8.1:32927404-32927423 | MS.gene70001:intron | 50.0% | |
| TCTGCTGTCTACATAGCCAC+TGG | + | chr8.1:32928364-32928383 | MS.gene70001:CDS | 50.0% | |
| TGAAGCACAAATACGGACCC+TGG | - | chr8.1:32927184-32927203 | None:intergenic | 50.0% | |
| TGACACCATGTTCATCCCCA+TGG | - | chr8.1:32927931-32927950 | None:intergenic | 50.0% | |
| TGATGCCATGGGGATGAACA+TGG | + | chr8.1:32927923-32927942 | MS.gene70001:CDS | 50.0% | |
| TGCAACAAGACACCCTTCAG+TGG | - | chr8.1:32926679-32926698 | None:intergenic | 50.0% | |
| TGCAGTACAGGTGATGCCAT+GGG | + | chr8.1:32927912-32927931 | MS.gene70001:CDS | 50.0% | |
| TGGAGTAGTTGCGGATGAAG+AGG | + | chr8.1:32927658-32927677 | MS.gene70001:intron | 50.0% | |
| TGGCATCACCTGTACTGCAA+CGG | - | chr8.1:32927911-32927930 | None:intergenic | 50.0% | |
| TGGTAAGTCTGTGGTGTGTG+AGG | + | chr8.1:32928198-32928217 | MS.gene70001:CDS | 50.0% | |
| TGTCTACATAGCCACTGGTC+AGG | + | chr8.1:32928369-32928388 | MS.gene70001:CDS | 50.0% | |
| TTGCAGTACAGGTGATGCCA+TGG | + | chr8.1:32927911-32927930 | MS.gene70001:CDS | 50.0% | |
| TTGGCGTGAGAAGATCCGTA+CGG | + | chr8.1:32926095-32926114 | MS.gene70001:CDS | 50.0% | |
| TTTACGGCAGTCTGCTAGTC+TGG | - | chr8.1:32926463-32926482 | None:intergenic | 50.0% | |
| ! | CGGTGAAGTGAGGTTTTCTC+CGG | - | chr8.1:32926001-32926020 | None:intergenic | 50.0% |
| ! | CGTATTTTCTCCTCCACCGT+TGG | + | chr8.1:32926076-32926095 | MS.gene70001:CDS | 50.0% |
| ! | GACGTATTGCCGCTGCTTTA+CGG | - | chr8.1:32926479-32926498 | None:intergenic | 50.0% |
| ! | TACAGCCGCTGCTTTCTTGT+CGG | - | chr8.1:32928161-32928180 | None:intergenic | 50.0% |
| ! | TGAAGTGAGGTTTTCTCCGG+TGG | - | chr8.1:32925998-32926017 | None:intergenic | 50.0% |
| ! | TGCACCGGTGAATCTAACAC+CGG | + | chr8.1:32926377-32926396 | MS.gene70001:CDS | 50.0% |
| !! | ATTCAGGTTGGTACTGTGGG+AGG | + | chr8.1:32928777-32928796 | MS.gene70001:intron | 50.0% |
| !! | CAAATTCCGGTTGGTGTTGC+GGG | + | chr8.1:32926609-32926628 | MS.gene70001:CDS | 50.0% |
| !! | GAGTACTGAACCGGCAACAA+TGG | - | chr8.1:32928901-32928920 | None:intergenic | 50.0% |
| !! | TTCAGGTTGGTACTGTGGGA+GGG | + | chr8.1:32928778-32928797 | MS.gene70001:intron | 50.0% |
| ACACCCTTCAGTGGTAGCCA+TGG | - | chr8.1:32926670-32926689 | None:intergenic | 55.0% | |
| ACAGTCCTGCAACCCTTGCA+AGG | - | chr8.1:32927286-32927305 | None:intergenic | 55.0% | |
| ACCTAGAAGGTAAACGGCGG+AGG | - | chr8.1:32926178-32926197 | None:intergenic | 55.0% | |
| AGCAGACTGCCGTAAAGCAG+CGG | + | chr8.1:32926467-32926486 | MS.gene70001:CDS | 55.0% | |
| AGCGGCAATACGTCGTTCAG+CGG | + | chr8.1:32926485-32926504 | MS.gene70001:CDS | 55.0% | |
| ATCGGAGAGATCATCCGGGA+AGG | - | chr8.1:32926226-32926245 | None:intergenic | 55.0% | |
| ATTGGAGTTACCGTTGCCGG+TGG | - | chr8.1:32926327-32926346 | None:intergenic | 55.0% | |
| CACCCTTCAGTGGTAGCCAT+GGG | - | chr8.1:32926669-32926688 | None:intergenic | 55.0% | |
| CACCGACGTAAAACCACCAC+CGG | + | chr8.1:32926308-32926327 | MS.gene70001:CDS | 55.0% | |
| CAGCAAGGGCTGATCCAGTT+AGG | - | chr8.1:32928303-32928322 | None:intergenic | 55.0% | |
| CAGTCCTGCAACCCTTGCAA+GGG | - | chr8.1:32927285-32927304 | None:intergenic | 55.0% | |
| CGGATCACGAACTTCCTTCC+CGG | + | chr8.1:32926209-32926228 | MS.gene70001:CDS | 55.0% | |
| CGTAAAACCACCACCGGCAA+CGG | + | chr8.1:32926314-32926333 | MS.gene70001:CDS | 55.0% | |
| CTAACTGGATCAGCCCTTGC+TGG | + | chr8.1:32928301-32928320 | MS.gene70001:CDS | 55.0% | |
| GCAGTACAGGTGATGCCATG+GGG | + | chr8.1:32927913-32927932 | MS.gene70001:CDS | 55.0% | |
| GGAACCCGTGAATGATGGCA+AGG | + | chr8.1:32928435-32928454 | MS.gene70001:CDS | 55.0% | |
| TGCAAGGGTTGCAGGACTGT+TGG | + | chr8.1:32927286-32927305 | MS.gene70001:intron | 55.0% | |
| TGCACCTGGAGATTCTGTGC+TGG | - | chr8.1:32928859-32928878 | None:intergenic | 55.0% | |
| TGCCCATGGCTACCACTGAA+GGG | + | chr8.1:32926664-32926683 | MS.gene70001:CDS | 55.0% | |
| TGGCCGTTGTGGAGTAGTTG+CGG | + | chr8.1:32927649-32927668 | MS.gene70001:intron | 55.0% | |
| TGTTGCGGGTCCACTGTTGT+TGG | + | chr8.1:32926623-32926642 | MS.gene70001:CDS | 55.0% | |
| ! | AGTGAGGTTTTCTCCGGTGG+TGG | - | chr8.1:32925995-32926014 | None:intergenic | 55.0% |
| ! | TCGACAAGTGCTGCTGGACA+CGG | - | chr8.1:32926288-32926307 | None:intergenic | 55.0% |
| ! | TGAAGGGCGTGGTAAGTCTG+TGG | + | chr8.1:32928189-32928208 | MS.gene70001:CDS | 55.0% |
| !! | GGTGGTGGTGGTAAGCTTCT+GGG | - | chr8.1:32925974-32925993 | None:intergenic | 55.0% |
| !! | TCAGGTTGGTACTGTGGGAG+GGG | + | chr8.1:32928779-32928798 | MS.gene70001:intron | 55.0% |
| !! | TGCCGGTGGTGGTTTTACGT+CGG | - | chr8.1:32926313-32926332 | None:intergenic | 55.0% |
| !! | TGGTGGTGGTGGTAAGCTTC+TGG | - | chr8.1:32925975-32925994 | None:intergenic | 55.0% |
| !! | TGTTGCCGGTTCAGTACTCG+CGG | + | chr8.1:32928902-32928921 | MS.gene70001:CDS | 55.0% |
| !!! | GGTTTTGAGGTTTTCGCCGC+CGG | - | chr8.1:32925953-32925972 | None:intergenic | 55.0% |
| AGTGGACCCGCAACACCAAC+CGG | - | chr8.1:32926618-32926637 | None:intergenic | 60.0% | |
| CCCTTGCTGGTGCTCTTGGT+GGG | + | chr8.1:32928314-32928333 | MS.gene70001:CDS | 60.0% | |
| CTGAGCAGGATCCTGACCAG+TGG | - | chr8.1:32928383-32928402 | None:intergenic | 60.0% | |
| CTTACCACCACCACCACCAC+CGG | + | chr8.1:32925979-32925998 | MS.gene70001:CDS | 60.0% | |
| CTTCCTCCACGTTCTCCCAC+CGG | + | chr8.1:32925931-32925950 | MS.gene70001:CDS | 60.0% | |
| GCCTCCGCCGTTTACCTTCT+AGG | + | chr8.1:32926174-32926193 | MS.gene70001:CDS | 60.0% | |
| GCGGGTCCACTGTTGTTGGA+TGG | + | chr8.1:32926627-32926646 | MS.gene70001:CDS | 60.0% | |
| GGATCCCTTGCAAGGGTTGC+AGG | + | chr8.1:32927278-32927297 | MS.gene70001:intron | 60.0% | |
| GGATCTTCTCACGCCAACGG+TGG | - | chr8.1:32926092-32926111 | None:intergenic | 60.0% | |
| GTGCCCATGGCTACCACTGA+AGG | + | chr8.1:32926663-32926682 | MS.gene70001:CDS | 60.0% | |
| TCAGCCCTTGCTGGTGCTCT+TGG | + | chr8.1:32928310-32928329 | MS.gene70001:CDS | 60.0% | |
| TCTTCTCACGCCAACGGTGG+AGG | - | chr8.1:32926089-32926108 | None:intergenic | 60.0% | |
| ! | TTGAGGTTTTCGCCGCCGGT+GGG | - | chr8.1:32925949-32925968 | None:intergenic | 60.0% |
| !! | ACCCACCAAGAGCACCAGCA+AGG | - | chr8.1:32928318-32928337 | None:intergenic | 60.0% |
| !! | CAGGTTGGTACTGTGGGAGG+GGG | + | chr8.1:32928780-32928799 | MS.gene70001:intron | 60.0% |
| !! | CCCACCAAGAGCACCAGCAA+GGG | - | chr8.1:32928317-32928336 | None:intergenic | 60.0% |
| !! | GAGGTTTTCTCCGGTGGTGG+TGG | - | chr8.1:32925992-32926011 | None:intergenic | 60.0% |
| !! | GTTGCCGGTTCAGTACTCGC+GGG | + | chr8.1:32928903-32928922 | MS.gene70001:CDS | 60.0% |
| !! | TCGGTGTCGACAAGTGCTGC+TGG | - | chr8.1:32926294-32926313 | None:intergenic | 60.0% |
| !! | TTTGAGGTTTTCGCCGCCGG+TGG | - | chr8.1:32925950-32925969 | None:intergenic | 60.0% |
| !!! | GTTTTCTCCGGTGGTGGTGG+TGG | - | chr8.1:32925989-32926008 | None:intergenic | 60.0% |
| GCCCTTGCTGGTGCTCTTGG+TGG | + | chr8.1:32928313-32928332 | MS.gene70001:CDS | 65.0% | |
| GGAGTTACCGTTGCCGGTGG+TGG | - | chr8.1:32926324-32926343 | None:intergenic | 65.0% | |
| GGCGCCAGCACAGAATCTCC+AGG | + | chr8.1:32928852-32928871 | MS.gene70001:CDS | 65.0% | |
| ! | AGTGCTGCTGGACACGGTCC+TGG | - | chr8.1:32926282-32926301 | None:intergenic | 65.0% |
| !! | CTCGCCCGCGAGTACTGAAC+CGG | - | chr8.1:32928910-32928929 | None:intergenic | 65.0% |
| !! | TTCTCCGGTGGTGGTGGTGG+TGG | - | chr8.1:32925986-32926005 | None:intergenic | 65.0% |
| CCTCCACGTTCTCCCACCGG+CGG | + | chr8.1:32925934-32925953 | MS.gene70001:CDS | 70.0% | |
| CCGCCGGTGGGAGAACGTGG+AGG | - | chr8.1:32925937-32925956 | None:intergenic | 75.0% | |
| TCGCCGCCGGTGGGAGAACG+TGG | - | chr8.1:32925940-32925959 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 32925904 | 32929025 | 32925904 | ID=MS.gene70001 |
| chr8.1 | mRNA | 32925904 | 32929025 | 32925904 | ID=MS.gene70001.t1;Parent=MS.gene70001 |
| chr8.1 | exon | 32925904 | 32926877 | 32925904 | ID=MS.gene70001.t1.exon1;Parent=MS.gene70001.t1 |
| chr8.1 | CDS | 32925904 | 32926877 | 32925904 | ID=cds.MS.gene70001.t1;Parent=MS.gene70001.t1 |
| chr8.1 | exon | 32927839 | 32928020 | 32927839 | ID=MS.gene70001.t1.exon2;Parent=MS.gene70001.t1 |
| chr8.1 | CDS | 32927839 | 32928020 | 32927839 | ID=cds.MS.gene70001.t1;Parent=MS.gene70001.t1 |
| chr8.1 | exon | 32928146 | 32928492 | 32928146 | ID=MS.gene70001.t1.exon3;Parent=MS.gene70001.t1 |
| chr8.1 | CDS | 32928146 | 32928492 | 32928146 | ID=cds.MS.gene70001.t1;Parent=MS.gene70001.t1 |
| chr8.1 | exon | 32928783 | 32929025 | 32928783 | ID=MS.gene70001.t1.exon4;Parent=MS.gene70001.t1 |
| chr8.1 | CDS | 32928783 | 32929025 | 32928783 | ID=cds.MS.gene70001.t1;Parent=MS.gene70001.t1 |
| Gene Sequence |
| Protein sequence |
