Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70024.t1 | XP_013454867.1 | 99.6 | 449 | 2 | 0 | 1 | 449 | 1 | 449 | 6.80E-263 | 916 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70024.t1 | P29500 | 100.0 | 424 | 0 | 0 | 1 | 424 | 1 | 424 | 1.4e-253 | 876.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70024.t1 | A0A072USS0 | 99.6 | 449 | 2 | 0 | 1 | 449 | 1 | 449 | 4.9e-263 | 916.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050338 | MS.gene70024 | 0.801394 | 9.19E-49 | -1.69E-46 |
| MS.gene053173 | MS.gene70024 | 0.817802 | 2.73E-52 | -1.69E-46 |
| MS.gene054551 | MS.gene70024 | 0.824098 | 9.70E-54 | -1.69E-46 |
| MS.gene054593 | MS.gene70024 | 0.807583 | 4.71E-50 | -1.69E-46 |
| MS.gene055308 | MS.gene70024 | 0.800299 | 1.54E-48 | -1.69E-46 |
| MS.gene05640 | MS.gene70024 | 0.817095 | 3.94E-52 | -1.69E-46 |
| MS.gene05652 | MS.gene70024 | 0.834298 | 3.25E-56 | -1.69E-46 |
| MS.gene057669 | MS.gene70024 | 0.823971 | 1.04E-53 | -1.69E-46 |
| MS.gene058853 | MS.gene70024 | 0.80289 | 4.53E-49 | -1.69E-46 |
| MS.gene05926 | MS.gene70024 | 0.827751 | 1.32E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70024.t1 | MTR_4g017630 | 99.555 | 449 | 2 | 0 | 1 | 449 | 1 | 449 | 0.0 | 942 |
| MS.gene70024.t1 | MTR_4g019110 | 96.047 | 430 | 17 | 0 | 1 | 430 | 1 | 430 | 0.0 | 850 |
| MS.gene70024.t1 | MTR_4g019090 | 95.814 | 430 | 18 | 0 | 1 | 430 | 1 | 430 | 0.0 | 848 |
| MS.gene70024.t1 | MTR_1g101130 | 95.814 | 430 | 18 | 0 | 1 | 430 | 1 | 430 | 0.0 | 848 |
| MS.gene70024.t1 | MTR_4g094535 | 95.116 | 430 | 21 | 0 | 1 | 430 | 1 | 430 | 0.0 | 842 |
| MS.gene70024.t1 | MTR_2g031310 | 94.884 | 430 | 22 | 0 | 1 | 430 | 1 | 430 | 0.0 | 841 |
| MS.gene70024.t1 | MTR_7g089120 | 94.419 | 430 | 24 | 0 | 1 | 430 | 1 | 430 | 0.0 | 837 |
| MS.gene70024.t1 | MTR_3g113970 | 93.056 | 432 | 28 | 1 | 1 | 430 | 1 | 432 | 0.0 | 825 |
| MS.gene70024.t1 | MTR_8g098360 | 90.698 | 430 | 40 | 0 | 1 | 430 | 1 | 430 | 0.0 | 816 |
| MS.gene70024.t1 | MTR_8g107250 | 90.271 | 442 | 40 | 2 | 1 | 439 | 1 | 442 | 0.0 | 814 |
| MS.gene70024.t1 | MTR_8g085980 | 41.705 | 434 | 243 | 2 | 1 | 424 | 1 | 434 | 1.10e-125 | 372 |
| MS.gene70024.t1 | MTR_3g110720 | 41.705 | 434 | 243 | 2 | 1 | 424 | 1 | 434 | 1.71e-124 | 369 |
| MS.gene70024.t1 | MTR_1g106005 | 41.203 | 449 | 251 | 3 | 1 | 439 | 1 | 446 | 4.70e-124 | 368 |
| MS.gene70024.t1 | MTR_7g085800 | 40.783 | 434 | 247 | 2 | 1 | 424 | 1 | 434 | 9.11e-124 | 367 |
| MS.gene70024.t1 | MTR_4g097830 | 41.244 | 434 | 245 | 2 | 1 | 424 | 1 | 434 | 1.90e-122 | 364 |
| MS.gene70024.t1 | MTR_6g029190 | 40.393 | 458 | 252 | 3 | 1 | 447 | 1 | 448 | 2.47e-122 | 363 |
| MS.gene70024.t1 | MTR_2g041670 | 37.472 | 451 | 269 | 4 | 1 | 442 | 1 | 447 | 2.10e-101 | 311 |
| MS.gene70024.t1 | MTR_7g117050 | 36.073 | 438 | 263 | 7 | 2 | 423 | 3 | 439 | 5.78e-99 | 305 |
| MS.gene70024.t1 | MTR_2g041400 | 37.705 | 427 | 253 | 4 | 1 | 418 | 1 | 423 | 1.67e-97 | 299 |
| MS.gene70024.t1 | MTR_3g063410 | 34.459 | 148 | 89 | 1 | 256 | 395 | 30 | 177 | 1.11e-28 | 112 |
| MS.gene70024.t1 | MTR_3g063410 | 32.593 | 135 | 83 | 1 | 269 | 395 | 4 | 138 | 1.33e-21 | 91.3 |
| MS.gene70024.t1 | MTR_4g093670 | 82.759 | 29 | 5 | 0 | 377 | 405 | 1 | 29 | 8.45e-11 | 57.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70024.t1 | AT5G62700 | 96.744 | 430 | 14 | 0 | 1 | 430 | 1 | 430 | 0.0 | 854 |
| MS.gene70024.t1 | AT5G62690 | 96.744 | 430 | 14 | 0 | 1 | 430 | 1 | 430 | 0.0 | 854 |
| MS.gene70024.t1 | AT5G23860 | 96.047 | 430 | 17 | 0 | 1 | 430 | 1 | 430 | 0.0 | 848 |
| MS.gene70024.t1 | AT5G23860 | 96.047 | 430 | 17 | 0 | 1 | 430 | 1 | 430 | 0.0 | 848 |
| MS.gene70024.t1 | AT2G29550 | 95.360 | 431 | 20 | 0 | 1 | 431 | 1 | 431 | 0.0 | 843 |
| MS.gene70024.t1 | AT1G75780 | 94.432 | 431 | 23 | 1 | 1 | 430 | 1 | 431 | 0.0 | 838 |
| MS.gene70024.t1 | AT5G12250 | 93.953 | 430 | 26 | 0 | 1 | 430 | 1 | 430 | 0.0 | 836 |
| MS.gene70024.t1 | AT4G20890 | 94.186 | 430 | 25 | 0 | 1 | 430 | 1 | 430 | 0.0 | 834 |
| MS.gene70024.t1 | AT5G44340 | 93.953 | 430 | 26 | 0 | 1 | 430 | 1 | 430 | 0.0 | 831 |
| MS.gene70024.t1 | AT1G20010 | 93.271 | 431 | 28 | 1 | 1 | 430 | 1 | 431 | 0.0 | 828 |
| MS.gene70024.t1 | AT1G64740 | 41.475 | 434 | 244 | 2 | 1 | 424 | 1 | 434 | 5.34e-126 | 373 |
| MS.gene70024.t1 | AT5G19780 | 41.475 | 434 | 244 | 2 | 1 | 424 | 1 | 434 | 1.94e-125 | 372 |
| MS.gene70024.t1 | AT5G19770 | 41.475 | 434 | 244 | 2 | 1 | 424 | 1 | 434 | 1.94e-125 | 372 |
| MS.gene70024.t1 | AT4G14960 | 41.781 | 438 | 242 | 3 | 1 | 428 | 1 | 435 | 2.15e-122 | 364 |
| MS.gene70024.t1 | AT1G04820 | 41.553 | 438 | 243 | 3 | 1 | 428 | 1 | 435 | 1.40e-121 | 362 |
| MS.gene70024.t1 | AT1G50010 | 41.553 | 438 | 243 | 3 | 1 | 428 | 1 | 435 | 1.40e-121 | 362 |
| MS.gene70024.t1 | AT4G14960 | 41.710 | 386 | 215 | 2 | 1 | 376 | 1 | 386 | 4.15e-104 | 316 |
| MS.gene70024.t1 | AT3G61650 | 35.011 | 457 | 278 | 8 | 2 | 442 | 3 | 456 | 5.45e-98 | 302 |
| MS.gene70024.t1 | AT5G05620 | 35.616 | 438 | 265 | 7 | 2 | 423 | 3 | 439 | 8.75e-98 | 301 |
Find 133 sgRNAs with CRISPR-Local
Find 214 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCAAATCGGAGCAAAATTC+TGG | 0.222809 | 4.4:-83247614 | MS.gene70024:CDS |
| ACAGTAGACTTGACATTGTT+TGG | 0.300254 | 4.4:+83245398 | None:intergenic |
| ACTGCTTCAGCCATGTTTAG+AGG | 0.311640 | 4.4:-83245500 | MS.gene70024:CDS |
| GGATCTTGAACCGGGTACTA+TGG | 0.338256 | 4.4:-83247457 | MS.gene70024:CDS |
| TGTTCCGAGAGCGGTTCTTA+TGG | 0.339518 | 4.4:-83247478 | MS.gene70024:CDS |
| CTCTTCTGATTTCAAAGATC+AGG | 0.345029 | 4.4:-83246107 | MS.gene70024:CDS |
| TGGAAACTCCACATCCATTC+AGG | 0.349700 | 4.4:-83245330 | MS.gene70024:CDS |
| AAGATGGCTTCAACATTCAT+TGG | 0.349952 | 4.4:-83245350 | MS.gene70024:CDS |
| CACTCACTTGGTGGAGGAAC+TGG | 0.361741 | 4.4:-83246144 | MS.gene70024:CDS |
| TGAGAATTGTGATTGCTTGC+AGG | 0.369709 | 4.4:-83247283 | MS.gene70024:CDS |
| CTTGGTGGAGGAACTGGATC+TGG | 0.390493 | 4.4:-83246138 | MS.gene70024:CDS |
| GTCAGCTTAACTCTGATCTT+AGG | 0.393922 | 4.4:-83245703 | MS.gene70024:CDS |
| ACTCATCCTACTTTGTTGAA+TGG | 0.394066 | 4.4:-83245424 | MS.gene70024:CDS |
| CACTTAGAGTCCTGTACTGC+TGG | 0.395756 | 4.4:+83245600 | None:intergenic |
| CTCCGATTTGGTTACCGCAT+TGG | 0.398686 | 4.4:+83247625 | None:intergenic |
| CACTGCTATGTTCAGGAGAA+AGG | 0.402943 | 4.4:-83245279 | MS.gene70024:CDS |
| AGCAGCACACATCATGTTCT+TGG | 0.404220 | 4.4:+83245547 | None:intergenic |
| AGACCGGATAACTTTGTGTT+TGG | 0.404999 | 4.4:-83247399 | MS.gene70024:CDS |
| GGTTCTTATGGATCTTGAAC+CGG | 0.408619 | 4.4:-83247466 | MS.gene70024:CDS |
| ATTCTGTTCTTGATGTTGTT+AGG | 0.411260 | 4.4:-83247314 | MS.gene70024:CDS |
| AAGCCATCTTCAACCCTGTC+GGG | 0.416609 | 4.4:+83245363 | None:intergenic |
| GGATGAGTATGGAGAGGAAG+AGG | 0.417641 | 4.4:-83245138 | MS.gene70024:CDS |
| AGAGTGGTGCTGGTAACAAT+TGG | 0.417986 | 4.4:-83247374 | MS.gene70024:CDS |
| AAGGTAAGCATCATCCTGTC+TGG | 0.420740 | 4.4:+83246075 | None:intergenic |
| GGTTGGATCGATTCCATGTT+CGG | 0.429014 | 4.4:+83247578 | None:intergenic |
| CACATTTGTTGAGTGAGCTC+AGG | 0.431352 | 4.4:+83245575 | None:intergenic |
| CCTCATCAGCGGTGGCATCT+TGG | 0.436615 | 4.4:+83245159 | None:intergenic |
| TCCTGTACTGCTGGGAGCCA+CGG | 0.440119 | 4.4:+83245609 | None:intergenic |
| CTGGTGTCACTTGTTGTTTG+AGG | 0.441906 | 4.4:-83245733 | MS.gene70024:CDS |
| ACCGCTGATGAGGATGAGTA+TGG | 0.442177 | 4.4:-83245149 | MS.gene70024:CDS |
| AACAGAGAGGGTAGCATTGT+AGG | 0.442752 | 4.4:+83246008 | None:intergenic |
| ACTTGTTGTTTGAGGTTCCC+TGG | 0.452117 | 4.4:-83245725 | MS.gene70024:CDS |
| CTGATATCAGCAACTATGTC+TGG | 0.452611 | 4.4:-83245752 | MS.gene70024:CDS |
| GTGTTTGGTCAGAGTGGTGC+TGG | 0.454211 | 4.4:-83247384 | MS.gene70024:CDS |
| AGCAGTTCACTGCTATGTTC+AGG | 0.456361 | 4.4:-83245286 | MS.gene70024:CDS |
| CTGGTAACAATTGGGCTAAA+GGG | 0.461290 | 4.4:-83247365 | MS.gene70024:CDS |
| GCTGGTAACAATTGGGCTAA+AGG | 0.464884 | 4.4:-83247366 | MS.gene70024:CDS |
| CATTTGTTCATCAACCTCCT+TGG | 0.470215 | 4.4:+83245466 | None:intergenic |
| TGGAGAGGAAGAGGGTGAAG+AGG | 0.473975 | 4.4:-83245129 | MS.gene70024:CDS |
| GGCCAATGCGGTAACCAAAT+CGG | 0.477508 | 4.4:-83247627 | MS.gene70024:CDS |
| GGAGGAACTGGATCTGGAAT+GGG | 0.477524 | 4.4:-83246132 | MS.gene70024:CDS |
| GGAGAAAGGCTTTCTTGCAT+TGG | 0.478824 | 4.4:-83245265 | MS.gene70024:CDS |
| TGAATCACCGGTGTAGCGTC+CGG | 0.479982 | 4.4:+83247557 | None:intergenic |
| GTGAGGTATCGCCCATGCCT+AGG | 0.488888 | 4.4:+83245521 | None:intergenic |
| CGGAGCAAAATTCTGGGAAG+TGG | 0.489877 | 4.4:-83247607 | MS.gene70024:CDS |
| CCCGTGGCTCCCAGCAGTAC+AGG | 0.489965 | 4.4:-83245610 | MS.gene70024:CDS |
| CCTGTACTGCTGGGAGCCAC+GGG | 0.492205 | 4.4:+83245610 | None:intergenic |
| GATGAGTATGGAGAGGAAGA+GGG | 0.503164 | 4.4:-83245137 | MS.gene70024:CDS |
| CCAAATCGGAGCAAAATTCT+GGG | 0.506377 | 4.4:-83247613 | MS.gene70024:CDS |
| GCTTTCTTGCATTGGTACAC+TGG | 0.506815 | 4.4:-83245257 | MS.gene70024:CDS |
| TGGAATCCATTCAACAAAGT+AGG | 0.509014 | 4.4:+83245418 | None:intergenic |
| TGTGCTGCTGACCCTAGGCA+TGG | 0.509772 | 4.4:-83245533 | MS.gene70024:CDS |
| TGGAGGAACTGGATCTGGAA+TGG | 0.510353 | 4.4:-83246133 | MS.gene70024:CDS |
| GAAGCCATCTTCAACCCTGT+CGG | 0.515879 | 4.4:+83245362 | None:intergenic |
| CAAGTATGCCACTCACTTGG+TGG | 0.517337 | 4.4:-83246153 | MS.gene70024:CDS |
| AGATCAGAGTTAAGCTGACC+AGG | 0.523471 | 4.4:+83245707 | None:intergenic |
| CCTACGGAACATTTCCTGAA+TGG | 0.523804 | 4.4:+83245316 | None:intergenic |
| TTGCATTGGTACACTGGTGA+AGG | 0.524227 | 4.4:-83245251 | MS.gene70024:CDS |
| TGACCAAACACAAAGTTATC+CGG | 0.525289 | 4.4:+83247396 | None:intergenic |
| TCTTCTGATTTCAAAGATCA+GGG | 0.527420 | 4.4:-83246106 | MS.gene70024:CDS |
| TTTCAAGTATGCCACTCACT+TGG | 0.530375 | 4.4:-83246156 | MS.gene70024:CDS |
| GAGTGGTGCTGGTAACAATT+GGG | 0.533887 | 4.4:-83247373 | MS.gene70024:CDS |
| CGGGTACTATGGATAGTATC+CGG | 0.537467 | 4.4:-83247446 | MS.gene70024:CDS |
| AACTTTGTGTTTGGTCAGAG+TGG | 0.539264 | 4.4:-83247390 | MS.gene70024:CDS |
| ACTATGGATAGTATCCGGTC+TGG | 0.540371 | 4.4:-83247441 | MS.gene70024:CDS |
| CTGAGCTCACTCAACAAATG+TGG | 0.540387 | 4.4:-83245574 | MS.gene70024:CDS |
| TGGGAGCCACGGGAGGTCAA+AGG | 0.542221 | 4.4:+83245620 | None:intergenic |
| GAACATTTCCTGAATGGATG+TGG | 0.547117 | 4.4:+83245322 | None:intergenic |
| ACAGAGAGGGTAGCATTGTA+GGG | 0.548602 | 4.4:+83246009 | None:intergenic |
| TCCTAAGGTTTCTGACACTG+TGG | 0.549921 | 4.4:-83246037 | MS.gene70024:CDS |
| CCAAGATGCCACCGCTGATG+AGG | 0.550130 | 4.4:-83245159 | MS.gene70024:CDS |
| ATTCAGATCTTCAACTTGAA+CGG | 0.550491 | 4.4:-83247539 | MS.gene70024:CDS |
| GTGTCAGAAACCTTAGGAGA+AGG | 0.550838 | 4.4:+83246042 | None:intergenic |
| AGTATCCGGTCTGGACCGTA+TGG | 0.551849 | 4.4:-83247432 | MS.gene70024:CDS |
| TGAGAGCAACATGAATGATC+TGG | 0.551963 | 4.4:-83245201 | MS.gene70024:CDS |
| GAACATGGAATCGATCCAAC+CGG | 0.551983 | 4.4:-83247576 | MS.gene70024:CDS |
| GTTCTTATGGATCTTGAACC+GGG | 0.556874 | 4.4:-83247465 | MS.gene70024:CDS |
| GGTTACCGCATTGGCCACCT+TGG | 0.557526 | 4.4:+83247634 | None:intergenic |
| TGAGGTATCGCCCATGCCTA+GGG | 0.558978 | 4.4:+83245522 | None:intergenic |
| TGGTGAAGGCATGGACGAGA+TGG | 0.560351 | 4.4:-83245237 | MS.gene70024:CDS |
| TGATGTGTGCTGCTGACCCT+AGG | 0.561458 | 4.4:-83245538 | MS.gene70024:CDS |
| GAGAATTGTGATTGCTTGCA+GGG | 0.561746 | 4.4:-83247282 | MS.gene70024:intron |
| CCATTCAGGAAATGTTCCGT+AGG | 0.563699 | 4.4:-83245316 | MS.gene70024:CDS |
| TGAAAACGCAGACGAGGTCA+TGG | 0.568870 | 4.4:-83245974 | MS.gene70024:CDS |
| TCAGGGAAGAATACCCAGAC+AGG | 0.570015 | 4.4:-83246089 | MS.gene70024:CDS |
| ACATTTGTTGAGTGAGCTCA+GGG | 0.571976 | 4.4:+83245576 | None:intergenic |
| GTACTGCTGGGAGCCACGGG+AGG | 0.573841 | 4.4:+83245613 | None:intergenic |
| TCACCGGTGTAGCGTCCGGT+TGG | 0.574212 | 4.4:+83247561 | None:intergenic |
| ACTCATCTTGCCTCTAAACA+TGG | 0.574860 | 4.4:+83245490 | None:intergenic |
| GCGGAAGCAAATGTCATACA+AGG | 0.580969 | 4.4:+83245936 | None:intergenic |
| AGATCCATAAGAACCGCTCT+CGG | 0.582689 | 4.4:+83247474 | None:intergenic |
| CGTCAAATTCTTCACATCCA+AGG | 0.585397 | 4.4:-83247651 | MS.gene70024:CDS |
| TGAGCTCACTCAACAAATGT+GGG | 0.585971 | 4.4:-83245573 | MS.gene70024:CDS |
| ACCACAGTGTCAGAAACCTT+AGG | 0.586612 | 4.4:+83246036 | None:intergenic |
| TGGAAGATTTGTTCCGAGAG+CGG | 0.586683 | 4.4:-83247487 | MS.gene70024:CDS |
| AAGAACAGAATCAATAAGCT+CGG | 0.587108 | 4.4:+83247326 | None:intergenic |
| TTTGCTCCTTTGACCTCCCG+TGG | 0.590963 | 4.4:-83245626 | MS.gene70024:CDS |
| AGGTAAGCATCATCCTGTCT+GGG | 0.594526 | 4.4:+83246076 | None:intergenic |
| AACAAGCTGGTGAACAGAGA+GGG | 0.596692 | 4.4:+83245996 | None:intergenic |
| TGTCAGAAACCTTAGGAGAA+GGG | 0.599265 | 4.4:+83246043 | None:intergenic |
| GAAGTGGTTTGTGCCGAACA+TGG | 0.604314 | 4.4:-83247591 | MS.gene70024:CDS |
| GATTGCTGAGCTTCAAAATG+CGG | 0.606039 | 4.4:+83245917 | None:intergenic |
| AAGTTGAAGATCTGAATCAC+CGG | 0.607154 | 4.4:+83247545 | None:intergenic |
| TTGGTACACTGGTGAAGGCA+TGG | 0.610557 | 4.4:-83245246 | MS.gene70024:CDS |
| TGAACTGCTCACTCACCCTA+CGG | 0.610579 | 4.4:+83245300 | None:intergenic |
| AGGAGAAGGGAAAACAGAGA+AGG | 0.611100 | 4.4:+83246056 | None:intergenic |
| TCTGACCATACGGTCCAGAC+CGG | 0.612759 | 4.4:+83247427 | None:intergenic |
| CATTCAGGAAATGTTCCGTA+GGG | 0.612874 | 4.4:-83245315 | MS.gene70024:CDS |
| ACTTAGAGTCCTGTACTGCT+GGG | 0.613311 | 4.4:+83245601 | None:intergenic |
| GATCCAACCGGACGCTACAC+CGG | 0.618066 | 4.4:-83247564 | MS.gene70024:CDS |
| GTATGGTCAGATCTTTAGAC+CGG | 0.619894 | 4.4:-83247415 | MS.gene70024:CDS |
| GGTCTAAAGATCTGACCATA+CGG | 0.621130 | 4.4:+83247417 | None:intergenic |
| AGCCATCTTCAACCCTGTCG+GGG | 0.621785 | 4.4:+83245364 | None:intergenic |
| CAGTTCCTCCACCAAGTGAG+TGG | 0.624166 | 4.4:+83246145 | None:intergenic |
| CACATCCAAGGTGGCCAATG+CGG | 0.624440 | 4.4:-83247639 | MS.gene70024:CDS |
| GTGCTGCTGACCCTAGGCAT+GGG | 0.624521 | 4.4:-83245532 | MS.gene70024:CDS |
| CGGATACTATCCATAGTACC+CGG | 0.627540 | 4.4:+83247447 | None:intergenic |
| GCTAAAGGGCATTATACTGA+AGG | 0.629394 | 4.4:-83247351 | MS.gene70024:CDS |
| GTATGCCACTCACTTGGTGG+AGG | 0.629569 | 4.4:-83246150 | MS.gene70024:CDS |
| GCCATCTTCAACCCTGTCGG+GGG | 0.637095 | 4.4:+83245365 | None:intergenic |
| TCCATACTCATCCTCATCAG+CGG | 0.637103 | 4.4:+83245148 | None:intergenic |
| CAACAAGCTGGTGAACAGAG+AGG | 0.644239 | 4.4:+83245995 | None:intergenic |
| ATACTCATCCTCATCAGCGG+TGG | 0.651736 | 4.4:+83245151 | None:intergenic |
| TATTACAATGAAGCAAGTGG+TGG | 0.660724 | 4.4:-83247507 | MS.gene70024:CDS |
| GATCAGAGTTAAGCTGACCA+GGG | 0.663223 | 4.4:+83245708 | None:intergenic |
| GCTTGTTGAAAACGCAGACG+AGG | 0.664624 | 4.4:-83245980 | MS.gene70024:CDS |
| TGATGAGGATGAGTATGGAG+AGG | 0.668397 | 4.4:-83245144 | MS.gene70024:CDS |
| TAGAGGCAAGATGAGTACCA+AGG | 0.678327 | 4.4:-83245483 | MS.gene70024:CDS |
| CAAATTCTTCACATCCAAGG+TGG | 0.706919 | 4.4:-83247648 | MS.gene70024:CDS |
| TAAACATGGCTGAAGCAGTG+AGG | 0.710604 | 4.4:+83245504 | None:intergenic |
| GTGTATTACAATGAAGCAAG+TGG | 0.718256 | 4.4:-83247510 | MS.gene70024:CDS |
| AGGCAAGATGAGTACCAAGG+AGG | 0.732271 | 4.4:-83245480 | MS.gene70024:CDS |
| GGACGAGATGGAATTCACTG+AGG | 0.754042 | 4.4:-83245225 | MS.gene70024:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTAACTTGTTTGAAATTT+GGG | - | chr4.4:83246251-83246270 | MS.gene70024:intron | 15.0% |
| !!! | GTTTTGTTGTTTTTTTTTTT+GGG | - | chr4.4:83245757-83245776 | MS.gene70024:CDS | 15.0% |
| !!! | TATTTAACTTGTTTGAAATT+TGG | - | chr4.4:83246250-83246269 | MS.gene70024:intron | 15.0% |
| !!! | TTAACTTGTTTTGAAATTTA+GGG | - | chr4.4:83245618-83245637 | MS.gene70024:CDS | 15.0% |
| !!! | TTTAACTTGTTTTGAAATTT+AGG | - | chr4.4:83245617-83245636 | MS.gene70024:CDS | 15.0% |
| !! | ACTATCATGATAGTAAAATT+TGG | - | chr4.4:83246431-83246450 | MS.gene70024:intron | 20.0% |
| !!! | GGTTTTGTTGTTTTTTTTTT+TGG | - | chr4.4:83245756-83245775 | MS.gene70024:CDS | 20.0% |
| !!! | GTAATGTGTTTAATTTTATG+TGG | - | chr4.4:83246960-83246979 | MS.gene70024:intron | 20.0% |
| !!! | TCAACTACATCTTTTTTTTA+AGG | + | chr4.4:83246139-83246158 | None:intergenic | 20.0% |
| !!! | TCTAACTTGTTTTGAAATTT+CGG | - | chr4.4:83245891-83245910 | MS.gene70024:intron | 20.0% |
| !!! | TGTTTTTCATAAAGATTTGT+TGG | - | chr4.4:83245837-83245856 | MS.gene70024:intron | 20.0% |
| !!! | TTTAACTTGTTTGAAATTTG+GGG | - | chr4.4:83246252-83246271 | MS.gene70024:intron | 20.0% |
| !!! | TTTGAACTTTTGTGATTTTA+GGG | - | chr4.4:83245516-83245535 | MS.gene70024:CDS | 20.0% |
| !!! | TTTTGAACTTTTGTGATTTT+AGG | - | chr4.4:83245515-83245534 | MS.gene70024:CDS | 20.0% |
| ! | TAAACCAAATTTCAAAGACA+AGG | + | chr4.4:83246478-83246497 | None:intergenic | 25.0% |
| !!! | AGTGTTTTTTTAGAGTTTTG+TGG | - | chr4.4:83245701-83245720 | MS.gene70024:CDS | 25.0% |
| !!! | ATGACTAGTTTAAACAAAAG+AGG | + | chr4.4:83246907-83246926 | None:intergenic | 25.0% |
| !!! | CTAACTTGTTTTGAAATTTC+GGG | - | chr4.4:83245892-83245911 | MS.gene70024:intron | 25.0% |
| !!! | GTCTTTGAAATTTGGTTTAA+GGG | - | chr4.4:83246479-83246498 | MS.gene70024:intron | 25.0% |
| !!! | GTGTTTTTTTAGAGTTTTGT+GGG | - | chr4.4:83245702-83245721 | MS.gene70024:CDS | 25.0% |
| !!! | GTTTTTTTTTTTGGGTTTGT+GGG | - | chr4.4:83245765-83245784 | MS.gene70024:CDS | 25.0% |
| !!! | TCGTTTGCTTTTTTATGTAA+GGG | - | chr4.4:83246512-83246531 | MS.gene70024:intron | 25.0% |
| !!! | TGATTTTTGTAATGGGTATA+TGG | - | chr4.4:83245725-83245744 | MS.gene70024:CDS | 25.0% |
| !!! | TGTCTTTGAAATTTGGTTTA+AGG | - | chr4.4:83246478-83246497 | MS.gene70024:intron | 25.0% |
| !!! | TGTTTTTCATAGAGTTTTGT+GGG | - | chr4.4:83245992-83246011 | MS.gene70024:CDS | 25.0% |
| !!! | TGTTTTTTTTTTTGGGTTTG+TGG | - | chr4.4:83245764-83245783 | MS.gene70024:CDS | 25.0% |
| !!! | TTCGTTTGCTTTTTTATGTA+AGG | - | chr4.4:83246511-83246530 | MS.gene70024:intron | 25.0% |
| !!! | TTTGAAATTTCGGGTTTTAT+TGG | - | chr4.4:83245901-83245920 | MS.gene70024:intron | 25.0% |
| !!! | TTTGACTTGTTTTGTAATGT+GGG | - | chr4.4:83246048-83246067 | MS.gene70024:CDS | 25.0% |
| !!! | TTTTGACTTGTTTTGTAATG+TGG | - | chr4.4:83246047-83246066 | MS.gene70024:CDS | 25.0% |
| AAGAACAGAATCAATAAGCT+CGG | + | chr4.4:83245437-83245456 | None:intergenic | 30.0% | |
| AATGGGTATATGGTCATTTA+GGG | - | chr4.4:83245735-83245754 | MS.gene70024:CDS | 30.0% | |
| ATTCAGATCTTCAACTTGAA+CGG | - | chr4.4:83245221-83245240 | MS.gene70024:CDS | 30.0% | |
| ATTCTGTTCTTGATGTTGTT+AGG | - | chr4.4:83245446-83245465 | MS.gene70024:CDS | 30.0% | |
| TCTTCTGATTTCAAAGATCA+GGG | - | chr4.4:83246654-83246673 | MS.gene70024:intron | 30.0% | |
| TTCTGAGTGATTCTTGTAAT+GGG | - | chr4.4:83246182-83246201 | MS.gene70024:intron | 30.0% | |
| ! | GTGTTTTTCATAGAGTTTTG+TGG | - | chr4.4:83245991-83246010 | MS.gene70024:CDS | 30.0% |
| ! | TAATGGGTATATGGTCATTT+AGG | - | chr4.4:83245734-83245753 | MS.gene70024:CDS | 30.0% |
| ! | TTGTGGGTGATTTTTGTAAT+GGG | - | chr4.4:83245718-83245737 | MS.gene70024:CDS | 30.0% |
| ! | TTTGTGGGTGATTTTTGTAA+TGG | - | chr4.4:83245717-83245736 | MS.gene70024:CDS | 30.0% |
| !! | ACTTCCTTGTCTTTGAAATT+TGG | - | chr4.4:83246471-83246490 | MS.gene70024:intron | 30.0% |
| !! | AGTGTTGATAGGATTTGTTA+GGG | - | chr4.4:83246290-83246309 | MS.gene70024:intron | 30.0% |
| !! | ATTTGTTGGTGATTTGTTGA+TGG | - | chr4.4:83245851-83245870 | MS.gene70024:intron | 30.0% |
| !! | CATTGATTAAGAAGTGTTGA+TGG | - | chr4.4:83245644-83245663 | MS.gene70024:CDS | 30.0% |
| !! | GTGTTTTTGTAGTGTTTTGT+CGG | - | chr4.4:83245557-83245576 | MS.gene70024:CDS | 30.0% |
| !! | TTGTTGATTCAACATGTTGA+TGG | - | chr4.4:83246074-83246093 | MS.gene70024:CDS | 30.0% |
| !! | TTTGTTGGTGATTTGTTGAT+GGG | - | chr4.4:83245852-83245871 | MS.gene70024:intron | 30.0% |
| !!! | CGTTTGCTTTTTTATGTAAG+GGG | - | chr4.4:83246513-83246532 | MS.gene70024:intron | 30.0% |
| !!! | GTTCTTTTTTGAGTGTTGAT+AGG | - | chr4.4:83246279-83246298 | MS.gene70024:intron | 30.0% |
| AAATAGCAATGCTTACAGCT+TGG | + | chr4.4:83246868-83246887 | None:intergenic | 35.0% | |
| AAGATGGCTTCAACATTCAT+TGG | - | chr4.4:83247410-83247429 | MS.gene70024:CDS | 35.0% | |
| AAGTTGAAGATCTGAATCAC+CGG | + | chr4.4:83245218-83245237 | None:intergenic | 35.0% | |
| ACAGTAGACTTGACATTGTT+TGG | + | chr4.4:83247365-83247384 | None:intergenic | 35.0% | |
| ACTCATCCTACTTTGTTGAA+TGG | - | chr4.4:83247336-83247355 | MS.gene70024:CDS | 35.0% | |
| ATGTAAGGGGTTAACTTTGA+TGG | - | chr4.4:83246526-83246545 | MS.gene70024:intron | 35.0% | |
| CTCTTCTGATTTCAAAGATC+AGG | - | chr4.4:83246653-83246672 | MS.gene70024:intron | 35.0% | |
| CTTCTGAGTGATTCTTGTAA+TGG | - | chr4.4:83246181-83246200 | MS.gene70024:intron | 35.0% | |
| GGCTGATTATGAAATTGGTT+TGG | - | chr4.4:83246555-83246574 | MS.gene70024:intron | 35.0% | |
| GTGTATTACAATGAAGCAAG+TGG | - | chr4.4:83245250-83245269 | MS.gene70024:CDS | 35.0% | |
| GTTGTGGCTGATTATGAAAT+TGG | - | chr4.4:83246550-83246569 | MS.gene70024:intron | 35.0% | |
| TATTACAATGAAGCAAGTGG+TGG | - | chr4.4:83245253-83245272 | MS.gene70024:CDS | 35.0% | |
| TGACCAAACACAAAGTTATC+CGG | + | chr4.4:83245367-83245386 | None:intergenic | 35.0% | |
| TGGAATCCATTCAACAAAGT+AGG | + | chr4.4:83247345-83247364 | None:intergenic | 35.0% | |
| ! | ATTTTATGTGGTTGTGCAGT+TGG | - | chr4.4:83246972-83246991 | MS.gene70024:intron | 35.0% |
| ! | CATGTCTTGTTGCTGTTAAT+GGG | - | chr4.4:83246393-83246412 | MS.gene70024:intron | 35.0% |
| ! | TCATGTCTTGTTGCTGTTAA+TGG | - | chr4.4:83246392-83246411 | MS.gene70024:intron | 35.0% |
| ! | TGTTTGAAGTGATGAAGTTG+TGG | - | chr4.4:83245800-83245819 | MS.gene70024:intron | 35.0% |
| ! | TTGTCGGTGGTTTTTGTAAT+GGG | - | chr4.4:83245573-83245592 | MS.gene70024:CDS | 35.0% |
| ! | TTTGTCGGTGGTTTTTGTAA+TGG | - | chr4.4:83245572-83245591 | MS.gene70024:CDS | 35.0% |
| ! | TTTTTGTAGTGTTTTGTCGG+TGG | - | chr4.4:83245560-83245579 | MS.gene70024:CDS | 35.0% |
| !! | AGTGATTCTTGTAATGGGTA+TGG | - | chr4.4:83246187-83246206 | MS.gene70024:intron | 35.0% |
| !! | GAGTGTTGATAGGATTTGTT+AGG | - | chr4.4:83246289-83246308 | MS.gene70024:intron | 35.0% |
| !! | GTGATTCTTGTAATGGGTAT+GGG | - | chr4.4:83246188-83246207 | MS.gene70024:intron | 35.0% |
| !! | TGTTTTATTGTTGTGTGTGC+AGG | - | chr4.4:83246580-83246599 | MS.gene70024:intron | 35.0% |
| AACTTTGTGTTTGGTCAGAG+TGG | - | chr4.4:83245370-83245389 | MS.gene70024:CDS | 40.0% | |
| ACCAAATCGGAGCAAAATTC+TGG | - | chr4.4:83245146-83245165 | MS.gene70024:CDS | 40.0% | |
| ACCATGAAAAAGTGAAGACG+CGG | + | chr4.4:83247110-83247129 | None:intergenic | 40.0% | |
| ACCCTGCAAGCAATAACAAA+GGG | + | chr4.4:83246223-83246242 | None:intergenic | 40.0% | |
| ACTCATCTTGCCTCTAAACA+TGG | + | chr4.4:83247273-83247292 | None:intergenic | 40.0% | |
| AGACCGGATAACTTTGTGTT+TGG | - | chr4.4:83245361-83245380 | MS.gene70024:CDS | 40.0% | |
| CAAATTCTTCACATCCAAGG+TGG | - | chr4.4:83245112-83245131 | MS.gene70024:CDS | 40.0% | |
| CATTCAGGAAATGTTCCGTA+GGG | - | chr4.4:83247445-83247464 | MS.gene70024:CDS | 40.0% | |
| CATTTGTTCATCAACCTCCT+TGG | + | chr4.4:83247297-83247316 | None:intergenic | 40.0% | |
| CCAAATCGGAGCAAAATTCT+GGG | - | chr4.4:83245147-83245166 | MS.gene70024:CDS | 40.0% | |
| CGTCAAATTCTTCACATCCA+AGG | - | chr4.4:83245109-83245128 | MS.gene70024:CDS | 40.0% | |
| CTGATATCAGCAACTATGTC+TGG | - | chr4.4:83247008-83247027 | MS.gene70024:intron | 40.0% | |
| CTGGTAACAATTGGGCTAAA+GGG | - | chr4.4:83245395-83245414 | MS.gene70024:CDS | 40.0% | |
| GAACATTTCCTGAATGGATG+TGG | + | chr4.4:83247441-83247460 | None:intergenic | 40.0% | |
| GAGAATTGTGATTGCTTGCA+GGG | - | chr4.4:83245478-83245497 | MS.gene70024:CDS | 40.0% | |
| GATTGCTGAGCTTCAAAATG+CGG | + | chr4.4:83246846-83246865 | None:intergenic | 40.0% | |
| GGTCTAAAGATCTGACCATA+CGG | + | chr4.4:83245346-83245365 | None:intergenic | 40.0% | |
| GGTTCTTATGGATCTTGAAC+CGG | - | chr4.4:83245294-83245313 | MS.gene70024:CDS | 40.0% | |
| GTATGGTCAGATCTTTAGAC+CGG | - | chr4.4:83245345-83245364 | MS.gene70024:CDS | 40.0% | |
| GTCAGCTTAACTCTGATCTT+AGG | - | chr4.4:83247057-83247076 | MS.gene70024:intron | 40.0% | |
| GTTCTTATGGATCTTGAACC+GGG | - | chr4.4:83245295-83245314 | MS.gene70024:CDS | 40.0% | |
| TACCCTGCAAGCAATAACAA+AGG | + | chr4.4:83246224-83246243 | None:intergenic | 40.0% | |
| TGAGAATTGTGATTGCTTGC+AGG | - | chr4.4:83245477-83245496 | MS.gene70024:CDS | 40.0% | |
| TGAGAGCAACATGAATGATC+TGG | - | chr4.4:83247559-83247578 | MS.gene70024:CDS | 40.0% | |
| TGAGCTCACTCAACAAATGT+GGG | - | chr4.4:83247187-83247206 | MS.gene70024:intron | 40.0% | |
| TGTAGTTGCAAGTTTCTGTG+TGG | - | chr4.4:83246344-83246363 | MS.gene70024:intron | 40.0% | |
| TGTCAGAAACCTTAGGAGAA+GGG | + | chr4.4:83246720-83246739 | None:intergenic | 40.0% | |
| ! | ACATTTGTTGAGTGAGCTCA+GGG | + | chr4.4:83247187-83247206 | None:intergenic | 40.0% |
| ! | TTGTTATTGCTTGCAGGGTA+TGG | - | chr4.4:83246224-83246243 | MS.gene70024:intron | 40.0% |
| ! | TTTCAAGTATGCCACTCACT+TGG | - | chr4.4:83246604-83246623 | MS.gene70024:intron | 40.0% |
| !! | AGGATTTGTTAGGGTTTGTC+TGG | - | chr4.4:83246299-83246318 | MS.gene70024:intron | 40.0% |
| !! | GCTAAAGGGCATTATACTGA+AGG | - | chr4.4:83245409-83245428 | MS.gene70024:CDS | 40.0% |
| !! | GGTTAACTTTGATGGTGTTG+TGG | - | chr4.4:83246534-83246553 | MS.gene70024:intron | 40.0% |
| !!! | CGTCTTCACTTTTTCATGGT+GGG | - | chr4.4:83247110-83247129 | MS.gene70024:intron | 40.0% |
| AAAAAGTGAAGACGCGGGAA+TGG | + | chr4.4:83247104-83247123 | None:intergenic | 45.0% | |
| AACAAGCTGGTGAACAGAGA+GGG | + | chr4.4:83246767-83246786 | None:intergenic | 45.0% | |
| AACAGAGAGGGTAGCATTGT+AGG | + | chr4.4:83246755-83246774 | None:intergenic | 45.0% | |
| AAGGTAAGCATCATCCTGTC+TGG | + | chr4.4:83246688-83246707 | None:intergenic | 45.0% | |
| ACAGAGAGGGTAGCATTGTA+GGG | + | chr4.4:83246754-83246773 | None:intergenic | 45.0% | |
| ACCACAGTGTCAGAAACCTT+AGG | + | chr4.4:83246727-83246746 | None:intergenic | 45.0% | |
| ACTATGGATAGTATCCGGTC+TGG | - | chr4.4:83245319-83245338 | MS.gene70024:CDS | 45.0% | |
| ACTGCTTCAGCCATGTTTAG+AGG | - | chr4.4:83247260-83247279 | MS.gene70024:intron | 45.0% | |
| ACTTAGAGTCCTGTACTGCT+GGG | + | chr4.4:83247162-83247181 | None:intergenic | 45.0% | |
| AGATCAGAGTTAAGCTGACC+AGG | + | chr4.4:83247056-83247075 | None:intergenic | 45.0% | |
| AGATCCATAAGAACCGCTCT+CGG | + | chr4.4:83245289-83245308 | None:intergenic | 45.0% | |
| AGCAGCACACATCATGTTCT+TGG | + | chr4.4:83247216-83247235 | None:intergenic | 45.0% | |
| AGCAGTTCACTGCTATGTTC+AGG | - | chr4.4:83247474-83247493 | MS.gene70024:CDS | 45.0% | |
| AGGAGAAGGGAAAACAGAGA+AGG | + | chr4.4:83246707-83246726 | None:intergenic | 45.0% | |
| AGGTAAGCATCATCCTGTCT+GGG | + | chr4.4:83246687-83246706 | None:intergenic | 45.0% | |
| CACTGCTATGTTCAGGAGAA+AGG | - | chr4.4:83247481-83247500 | MS.gene70024:CDS | 45.0% | |
| CCATGAAAAAGTGAAGACGC+GGG | + | chr4.4:83247109-83247128 | None:intergenic | 45.0% | |
| CCATTCAGGAAATGTTCCGT+AGG | - | chr4.4:83247444-83247463 | MS.gene70024:CDS | 45.0% | |
| CCTACGGAACATTTCCTGAA+TGG | + | chr4.4:83247447-83247466 | None:intergenic | 45.0% | |
| CGGATACTATCCATAGTACC+CGG | + | chr4.4:83245316-83245335 | None:intergenic | 45.0% | |
| CGGGTACTATGGATAGTATC+CGG | - | chr4.4:83245314-83245333 | MS.gene70024:CDS | 45.0% | |
| CTGAGCTCACTCAACAAATG+TGG | - | chr4.4:83247186-83247205 | MS.gene70024:intron | 45.0% | |
| GAACATGGAATCGATCCAAC+CGG | - | chr4.4:83245184-83245203 | MS.gene70024:CDS | 45.0% | |
| GATCAGAGTTAAGCTGACCA+GGG | + | chr4.4:83247055-83247074 | None:intergenic | 45.0% | |
| GATGAGTATGGAGAGGAAGA+GGG | - | chr4.4:83247623-83247642 | MS.gene70024:CDS | 45.0% | |
| GCGGAAGCAAATGTCATACA+AGG | + | chr4.4:83246827-83246846 | None:intergenic | 45.0% | |
| GCTGGTAACAATTGGGCTAA+AGG | - | chr4.4:83245394-83245413 | MS.gene70024:CDS | 45.0% | |
| GGAGAAAGGCTTTCTTGCAT+TGG | - | chr4.4:83247495-83247514 | MS.gene70024:CDS | 45.0% | |
| GTGTCAGAAACCTTAGGAGA+AGG | + | chr4.4:83246721-83246740 | None:intergenic | 45.0% | |
| TAAACATGGCTGAAGCAGTG+AGG | + | chr4.4:83247259-83247278 | None:intergenic | 45.0% | |
| TAGAGGCAAGATGAGTACCA+AGG | - | chr4.4:83247277-83247296 | MS.gene70024:intron | 45.0% | |
| TCCATACTCATCCTCATCAG+CGG | + | chr4.4:83247615-83247634 | None:intergenic | 45.0% | |
| TCCTAAGGTTTCTGACACTG+TGG | - | chr4.4:83246723-83246742 | MS.gene70024:intron | 45.0% | |
| TGATGAGGATGAGTATGGAG+AGG | - | chr4.4:83247616-83247635 | MS.gene70024:CDS | 45.0% | |
| TGGAAACTCCACATCCATTC+AGG | - | chr4.4:83247430-83247449 | MS.gene70024:CDS | 45.0% | |
| ! | CACATTTGTTGAGTGAGCTC+AGG | + | chr4.4:83247188-83247207 | None:intergenic | 45.0% |
| ! | CCCAGAATTTTGCTCCGATT+TGG | + | chr4.4:83245150-83245169 | None:intergenic | 45.0% |
| ! | CTCTGTTTTCCCTTCTCCTA+AGG | - | chr4.4:83246708-83246727 | MS.gene70024:intron | 45.0% |
| ! | GCTTTCTTGCATTGGTACAC+TGG | - | chr4.4:83247503-83247522 | MS.gene70024:CDS | 45.0% |
| ! | GGTTGGATCGATTCCATGTT+CGG | + | chr4.4:83245185-83245204 | None:intergenic | 45.0% |
| ! | TGGAAGATTTGTTCCGAGAG+CGG | - | chr4.4:83245273-83245292 | MS.gene70024:CDS | 45.0% |
| ! | TTGCATTGGTACACTGGTGA+AGG | - | chr4.4:83247509-83247528 | MS.gene70024:CDS | 45.0% |
| !! | ACTTGTTGTTTGAGGTTCCC+TGG | - | chr4.4:83247035-83247054 | MS.gene70024:intron | 45.0% |
| !! | AGAGTGGTGCTGGTAACAAT+TGG | - | chr4.4:83245386-83245405 | MS.gene70024:CDS | 45.0% |
| !! | AGCCCTTTGTTATTGCTTGC+AGG | - | chr4.4:83246218-83246237 | MS.gene70024:intron | 45.0% |
| !! | CTGGTGTCACTTGTTGTTTG+AGG | - | chr4.4:83247027-83247046 | MS.gene70024:intron | 45.0% |
| !! | GAGTGGTGCTGGTAACAATT+GGG | - | chr4.4:83245387-83245406 | MS.gene70024:CDS | 45.0% |
| !! | GCCCTTTGTTATTGCTTGCA+GGG | - | chr4.4:83246219-83246238 | MS.gene70024:intron | 45.0% |
| !!! | GCGTCTTCACTTTTTCATGG+TGG | - | chr4.4:83247109-83247128 | MS.gene70024:intron | 45.0% |
| AAGCCATCTTCAACCCTGTC+GGG | + | chr4.4:83247400-83247419 | None:intergenic | 50.0% | |
| ACCGCTGATGAGGATGAGTA+TGG | - | chr4.4:83247611-83247630 | MS.gene70024:CDS | 50.0% | |
| AGGCAAGATGAGTACCAAGG+AGG | - | chr4.4:83247280-83247299 | MS.gene70024:intron | 50.0% | |
| ATACTCATCCTCATCAGCGG+TGG | + | chr4.4:83247612-83247631 | None:intergenic | 50.0% | |
| CAACAAGCTGGTGAACAGAG+AGG | + | chr4.4:83246768-83246787 | None:intergenic | 50.0% | |
| CAAGTATGCCACTCACTTGG+TGG | - | chr4.4:83246607-83246626 | MS.gene70024:intron | 50.0% | |
| CACTTAGAGTCCTGTACTGC+TGG | + | chr4.4:83247163-83247182 | None:intergenic | 50.0% | |
| GAAGCCATCTTCAACCCTGT+CGG | + | chr4.4:83247401-83247420 | None:intergenic | 50.0% | |
| GGACGAGATGGAATTCACTG+AGG | - | chr4.4:83247535-83247554 | MS.gene70024:CDS | 50.0% | |
| GGATCTTGAACCGGGTACTA+TGG | - | chr4.4:83245303-83245322 | MS.gene70024:CDS | 50.0% | |
| GGATGAGTATGGAGAGGAAG+AGG | - | chr4.4:83247622-83247641 | MS.gene70024:CDS | 50.0% | |
| GGCCAATGCGGTAACCAAAT+CGG | - | chr4.4:83245133-83245152 | MS.gene70024:CDS | 50.0% | |
| TCAGGGAAGAATACCCAGAC+AGG | - | chr4.4:83246671-83246690 | MS.gene70024:intron | 50.0% | |
| TCTGTGATATTCCCCCGACA+GGG | - | chr4.4:83247384-83247403 | MS.gene70024:CDS | 50.0% | |
| TGAAAACGCAGACGAGGTCA+TGG | - | chr4.4:83246786-83246805 | MS.gene70024:intron | 50.0% | |
| TGAACTGCTCACTCACCCTA+CGG | + | chr4.4:83247463-83247482 | None:intergenic | 50.0% | |
| TGGAGGAACTGGATCTGGAA+TGG | - | chr4.4:83246627-83246646 | MS.gene70024:intron | 50.0% | |
| TGTTCCGAGAGCGGTTCTTA+TGG | - | chr4.4:83245282-83245301 | MS.gene70024:CDS | 50.0% | |
| TTGGTACACTGGTGAAGGCA+TGG | - | chr4.4:83247514-83247533 | MS.gene70024:CDS | 50.0% | |
| ! | CGGAGCAAAATTCTGGGAAG+TGG | - | chr4.4:83245153-83245172 | MS.gene70024:CDS | 50.0% |
| ! | CGTCTGCGTTTTCAACAAGC+TGG | + | chr4.4:83246780-83246799 | None:intergenic | 50.0% |
| ! | GAAGTGGTTTGTGCCGAACA+TGG | - | chr4.4:83245169-83245188 | MS.gene70024:CDS | 50.0% |
| ! | GCTTGTTGAAAACGCAGACG+AGG | - | chr4.4:83246780-83246799 | MS.gene70024:intron | 50.0% |
| ! | GGAGGAACTGGATCTGGAAT+GGG | - | chr4.4:83246628-83246647 | MS.gene70024:intron | 50.0% |
| !! | CTCCGATTTGGTTACCGCAT+TGG | + | chr4.4:83245138-83245157 | None:intergenic | 50.0% |
| !!! | CCCGCGTCTTCACTTTTTCA+TGG | - | chr4.4:83247106-83247125 | MS.gene70024:intron | 50.0% |
| AGCCATCTTCAACCCTGTCG+GGG | + | chr4.4:83247399-83247418 | None:intergenic | 55.0% | |
| AGTATCCGGTCTGGACCGTA+TGG | - | chr4.4:83245328-83245347 | MS.gene70024:CDS | 55.0% | |
| CACATCCAAGGTGGCCAATG+CGG | - | chr4.4:83245121-83245140 | MS.gene70024:CDS | 55.0% | |
| CAGTTCCTCCACCAAGTGAG+TGG | + | chr4.4:83246618-83246637 | None:intergenic | 55.0% | |
| CTTGGTGGAGGAACTGGATC+TGG | - | chr4.4:83246622-83246641 | MS.gene70024:intron | 55.0% | |
| GTCTGTGATATTCCCCCGAC+AGG | - | chr4.4:83247383-83247402 | MS.gene70024:CDS | 55.0% | |
| GTGTTTGGTCAGAGTGGTGC+TGG | - | chr4.4:83245376-83245395 | MS.gene70024:CDS | 55.0% | |
| TCTGACCATACGGTCCAGAC+CGG | + | chr4.4:83245336-83245355 | None:intergenic | 55.0% | |
| TGAATCACCGGTGTAGCGTC+CGG | + | chr4.4:83245206-83245225 | None:intergenic | 55.0% | |
| TGGAGAGGAAGAGGGTGAAG+AGG | - | chr4.4:83247631-83247650 | MS.gene70024:CDS | 55.0% | |
| TTTGCTCCTTTGACCTCCCG+TGG | - | chr4.4:83247134-83247153 | MS.gene70024:intron | 55.0% | |
| ! | CACTCACTTGGTGGAGGAAC+TGG | - | chr4.4:83246616-83246635 | MS.gene70024:intron | 55.0% |
| ! | GTATGCCACTCACTTGGTGG+AGG | - | chr4.4:83246610-83246629 | MS.gene70024:intron | 55.0% |
| ! | TGATGTGTGCTGCTGACCCT+AGG | - | chr4.4:83247222-83247241 | MS.gene70024:intron | 55.0% |
| ! | TGGTGAAGGCATGGACGAGA+TGG | - | chr4.4:83247523-83247542 | MS.gene70024:CDS | 55.0% |
| !! | TGAGGTATCGCCCATGCCTA+GGG | + | chr4.4:83247241-83247260 | None:intergenic | 55.0% |
| CCAAGATGCCACCGCTGATG+AGG | - | chr4.4:83247601-83247620 | MS.gene70024:CDS | 60.0% | |
| CCTCATCAGCGGTGGCATCT+TGG | + | chr4.4:83247604-83247623 | None:intergenic | 60.0% | |
| GATCCAACCGGACGCTACAC+CGG | - | chr4.4:83245196-83245215 | MS.gene70024:CDS | 60.0% | |
| GCCATCTTCAACCCTGTCGG+GGG | + | chr4.4:83247398-83247417 | None:intergenic | 60.0% | |
| TCCCCCGACAGGGTTGAAGA+TGG | - | chr4.4:83247394-83247413 | MS.gene70024:CDS | 60.0% | |
| TCCTGTACTGCTGGGAGCCA+CGG | + | chr4.4:83247154-83247173 | None:intergenic | 60.0% | |
| ! | GGTTACCGCATTGGCCACCT+TGG | + | chr4.4:83245129-83245148 | None:intergenic | 60.0% |
| ! | GTGCTGCTGACCCTAGGCAT+GGG | - | chr4.4:83247228-83247247 | MS.gene70024:intron | 60.0% |
| ! | TGTGCTGCTGACCCTAGGCA+TGG | - | chr4.4:83247227-83247246 | MS.gene70024:intron | 60.0% |
| !! | GTGAGGTATCGCCCATGCCT+AGG | + | chr4.4:83247242-83247261 | None:intergenic | 60.0% |
| CCTGTACTGCTGGGAGCCAC+GGG | + | chr4.4:83247153-83247172 | None:intergenic | 65.0% | |
| TCACCGGTGTAGCGTCCGGT+TGG | + | chr4.4:83245202-83245221 | None:intergenic | 65.0% | |
| TGGGAGCCACGGGAGGTCAA+AGG | + | chr4.4:83247143-83247162 | None:intergenic | 65.0% | |
| CCCGTGGCTCCCAGCAGTAC+AGG | - | chr4.4:83247150-83247169 | MS.gene70024:intron | 70.0% | |
| GTACTGCTGGGAGCCACGGG+AGG | + | chr4.4:83247150-83247169 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 83245106 | 83247676 | 83245106 | ID=MS.gene70024 |
| chr4.4 | mRNA | 83245106 | 83247676 | 83245106 | ID=MS.gene70024.t1;Parent=MS.gene70024 |
| chr4.4 | exon | 83247283 | 83247676 | 83247283 | ID=MS.gene70024.t1.exon1;Parent=MS.gene70024.t1 |
| chr4.4 | CDS | 83247283 | 83247676 | 83247283 | ID=cds.MS.gene70024.t1;Parent=MS.gene70024.t1 |
| chr4.4 | exon | 83245911 | 83246180 | 83245911 | ID=MS.gene70024.t1.exon2;Parent=MS.gene70024.t1 |
| chr4.4 | CDS | 83245911 | 83246180 | 83245911 | ID=cds.MS.gene70024.t1;Parent=MS.gene70024.t1 |
| chr4.4 | exon | 83245106 | 83245791 | 83245106 | ID=MS.gene70024.t1.exon3;Parent=MS.gene70024.t1 |
| chr4.4 | CDS | 83245106 | 83245791 | 83245106 | ID=cds.MS.gene70024.t1;Parent=MS.gene70024.t1 |
| Gene Sequence |
| Protein sequence |
