Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70341.t1 | XP_003630093.1 | 98.6 | 358 | 5 | 0 | 1 | 358 | 1 | 358 | 1.40E-197 | 698.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70341.t1 | Q39237 | 59.7 | 365 | 136 | 4 | 4 | 357 | 3 | 367 | 7.3e-115 | 415.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70341.t1 | G7LB89 | 98.6 | 358 | 5 | 0 | 1 | 358 | 1 | 358 | 9.8e-198 | 698.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene70341.t1 | TF | bZIP |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052570 | MS.gene70341 | 0.823424 | 1.40E-53 | -1.69E-46 |
| MS.gene059698 | MS.gene70341 | 0.958485 | 2.10E-116 | -1.69E-46 |
| MS.gene059702 | MS.gene70341 | 0.896658 | 2.99E-76 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70341.t1 | MTR_8g091650 | 98.603 | 358 | 5 | 0 | 1 | 358 | 1 | 358 | 0.0 | 738 |
| MS.gene70341.t1 | MTR_8g091650 | 89.594 | 394 | 5 | 1 | 1 | 358 | 1 | 394 | 0.0 | 700 |
| MS.gene70341.t1 | MTR_8g091650 | 98.239 | 284 | 5 | 0 | 75 | 358 | 2 | 285 | 0.0 | 580 |
| MS.gene70341.t1 | MTR_3g087940 | 68.785 | 362 | 105 | 4 | 4 | 358 | 3 | 363 | 0.0 | 511 |
| MS.gene70341.t1 | MTR_5g060950 | 47.977 | 346 | 173 | 4 | 15 | 353 | 1 | 346 | 3.87e-100 | 300 |
| MS.gene70341.t1 | MTR_3g073560 | 46.377 | 345 | 180 | 3 | 15 | 354 | 1 | 345 | 6.13e-99 | 305 |
| MS.gene70341.t1 | MTR_8g040120 | 51.689 | 296 | 129 | 4 | 70 | 356 | 176 | 466 | 1.47e-94 | 290 |
| MS.gene70341.t1 | MTR_7g089800 | 51.014 | 296 | 131 | 4 | 70 | 356 | 133 | 423 | 1.09e-93 | 286 |
| MS.gene70341.t1 | MTR_7g089800 | 51.014 | 296 | 131 | 4 | 70 | 356 | 162 | 452 | 2.06e-93 | 286 |
| MS.gene70341.t1 | MTR_2g086420 | 50.526 | 285 | 129 | 4 | 75 | 356 | 194 | 469 | 3.37e-90 | 279 |
| MS.gene70341.t1 | MTR_2g086420 | 50.526 | 285 | 129 | 4 | 75 | 356 | 193 | 468 | 3.62e-90 | 279 |
| MS.gene70341.t1 | MTR_7g092750 | 42.643 | 333 | 180 | 4 | 32 | 356 | 33 | 362 | 6.55e-88 | 269 |
| MS.gene70341.t1 | MTR_5g054900 | 48.797 | 291 | 137 | 3 | 74 | 356 | 67 | 353 | 1.20e-87 | 268 |
| MS.gene70341.t1 | MTR_5g054900 | 48.621 | 290 | 135 | 3 | 74 | 356 | 67 | 349 | 8.46e-87 | 266 |
| MS.gene70341.t1 | MTR_7g092750 | 45.098 | 306 | 160 | 3 | 59 | 356 | 158 | 463 | 8.49e-87 | 270 |
| MS.gene70341.t1 | MTR_5g054900 | 48.797 | 291 | 137 | 3 | 74 | 356 | 148 | 434 | 1.33e-86 | 268 |
| MS.gene70341.t1 | MTR_5g054900 | 48.621 | 290 | 135 | 3 | 74 | 356 | 178 | 460 | 1.32e-85 | 266 |
| MS.gene70341.t1 | MTR_4g053250 | 48.057 | 283 | 136 | 3 | 75 | 356 | 189 | 461 | 3.40e-84 | 264 |
| MS.gene70341.t1 | MTR_1g111310 | 44.828 | 290 | 151 | 4 | 74 | 356 | 420 | 707 | 4.07e-77 | 251 |
| MS.gene70341.t1 | MTR_1g111310 | 44.681 | 282 | 143 | 4 | 74 | 350 | 53 | 326 | 2.02e-68 | 228 |
| MS.gene70341.t1 | MTR_7g092750 | 41.176 | 306 | 146 | 4 | 59 | 356 | 158 | 437 | 1.28e-72 | 232 |
| MS.gene70341.t1 | MTR_0126s0080 | 38.720 | 328 | 166 | 8 | 3 | 309 | 146 | 459 | 7.12e-63 | 208 |
| MS.gene70341.t1 | MTR_3g044820 | 44.848 | 165 | 83 | 4 | 74 | 230 | 44 | 208 | 5.63e-40 | 140 |
| MS.gene70341.t1 | MTR_1g090370 | 33.796 | 216 | 117 | 6 | 129 | 338 | 22 | 217 | 5.63e-30 | 115 |
| MS.gene70341.t1 | MTR_8g094690 | 25.806 | 248 | 149 | 5 | 133 | 345 | 2 | 249 | 1.43e-13 | 70.5 |
| MS.gene70341.t1 | MTR_1g111320 | 55.172 | 58 | 25 | 1 | 75 | 131 | 146 | 203 | 5.70e-12 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70341.t1 | AT5G65210 | 60.109 | 366 | 133 | 5 | 4 | 357 | 3 | 367 | 9.84e-156 | 442 |
| MS.gene70341.t1 | AT5G65210 | 60.109 | 366 | 133 | 5 | 4 | 357 | 3 | 367 | 9.84e-156 | 442 |
| MS.gene70341.t1 | AT5G65210 | 60.109 | 366 | 133 | 5 | 4 | 357 | 3 | 367 | 9.84e-156 | 442 |
| MS.gene70341.t1 | AT5G65210 | 60.109 | 366 | 133 | 5 | 4 | 357 | 3 | 367 | 9.84e-156 | 442 |
| MS.gene70341.t1 | AT5G65210 | 60.109 | 366 | 133 | 5 | 4 | 357 | 3 | 367 | 9.84e-156 | 442 |
| MS.gene70341.t1 | AT5G65210 | 60.109 | 366 | 133 | 5 | 4 | 357 | 3 | 367 | 9.84e-156 | 442 |
| MS.gene70341.t1 | AT5G10030 | 60.989 | 364 | 129 | 5 | 4 | 357 | 3 | 363 | 3.46e-155 | 441 |
| MS.gene70341.t1 | AT5G10030 | 60.989 | 364 | 129 | 5 | 4 | 357 | 3 | 363 | 3.46e-155 | 441 |
| MS.gene70341.t1 | AT5G10030 | 60.989 | 364 | 129 | 5 | 4 | 357 | 3 | 363 | 3.46e-155 | 441 |
| MS.gene70341.t1 | AT5G10030 | 60.989 | 364 | 129 | 5 | 4 | 357 | 3 | 363 | 3.46e-155 | 441 |
| MS.gene70341.t1 | AT5G10030 | 60.989 | 364 | 129 | 5 | 4 | 357 | 3 | 363 | 3.46e-155 | 441 |
| MS.gene70341.t1 | AT5G65210 | 66.316 | 285 | 95 | 1 | 74 | 357 | 13 | 297 | 3.70e-138 | 395 |
| MS.gene70341.t1 | AT1G77920 | 49.867 | 375 | 161 | 5 | 1 | 357 | 2 | 367 | 2.87e-124 | 362 |
| MS.gene70341.t1 | AT1G22070 | 51.093 | 366 | 157 | 5 | 13 | 356 | 17 | 382 | 1.63e-122 | 358 |
| MS.gene70341.t1 | AT5G06950 | 52.381 | 294 | 127 | 4 | 71 | 356 | 42 | 330 | 1.60e-93 | 282 |
| MS.gene70341.t1 | AT5G06950 | 52.381 | 294 | 127 | 4 | 71 | 356 | 42 | 330 | 1.60e-93 | 282 |
| MS.gene70341.t1 | AT5G06950 | 52.381 | 294 | 127 | 4 | 71 | 356 | 42 | 330 | 1.60e-93 | 282 |
| MS.gene70341.t1 | AT5G06950 | 52.381 | 294 | 127 | 4 | 71 | 356 | 42 | 330 | 1.60e-93 | 282 |
| MS.gene70341.t1 | AT5G06950 | 52.381 | 294 | 127 | 4 | 71 | 356 | 42 | 330 | 1.60e-93 | 282 |
| MS.gene70341.t1 | AT1G08320 | 50.704 | 284 | 130 | 4 | 75 | 356 | 54 | 329 | 8.39e-93 | 281 |
| MS.gene70341.t1 | AT1G08320 | 50.704 | 284 | 130 | 4 | 75 | 356 | 54 | 329 | 8.39e-93 | 281 |
| MS.gene70341.t1 | AT3G12250 | 51.525 | 295 | 130 | 4 | 70 | 356 | 14 | 303 | 7.73e-92 | 277 |
| MS.gene70341.t1 | AT3G12250 | 51.525 | 295 | 130 | 4 | 70 | 356 | 41 | 330 | 1.27e-91 | 278 |
| MS.gene70341.t1 | AT3G12250 | 51.525 | 295 | 130 | 4 | 70 | 356 | 41 | 330 | 1.27e-91 | 278 |
| MS.gene70341.t1 | AT3G12250 | 51.525 | 295 | 130 | 4 | 70 | 356 | 41 | 330 | 1.27e-91 | 278 |
| MS.gene70341.t1 | AT3G12250 | 51.525 | 295 | 130 | 4 | 70 | 356 | 41 | 330 | 1.27e-91 | 278 |
| MS.gene70341.t1 | AT1G08320 | 50.704 | 284 | 130 | 4 | 75 | 356 | 178 | 453 | 2.19e-91 | 282 |
| MS.gene70341.t1 | AT1G08320 | 50.704 | 284 | 130 | 4 | 75 | 356 | 178 | 453 | 2.19e-91 | 282 |
| MS.gene70341.t1 | AT1G08320 | 50.704 | 284 | 130 | 4 | 75 | 356 | 178 | 453 | 2.19e-91 | 282 |
| MS.gene70341.t1 | AT3G12250 | 51.525 | 295 | 130 | 4 | 70 | 356 | 35 | 324 | 2.47e-91 | 276 |
| MS.gene70341.t1 | AT3G12250 | 49.216 | 319 | 141 | 5 | 54 | 356 | 42 | 355 | 8.34e-91 | 276 |
| MS.gene70341.t1 | AT5G06960 | 50.865 | 289 | 131 | 3 | 75 | 356 | 26 | 310 | 2.25e-89 | 271 |
| MS.gene70341.t1 | AT5G06960 | 50.865 | 289 | 131 | 3 | 75 | 356 | 46 | 330 | 2.64e-89 | 271 |
| MS.gene70341.t1 | AT5G06960 | 50.865 | 289 | 131 | 3 | 75 | 356 | 46 | 330 | 2.64e-89 | 271 |
| MS.gene70341.t1 | AT5G06839 | 43.567 | 342 | 167 | 5 | 41 | 356 | 117 | 458 | 3.60e-85 | 265 |
| MS.gene70341.t1 | AT5G06839 | 45.779 | 308 | 151 | 4 | 65 | 356 | 108 | 415 | 5.20e-85 | 263 |
| MS.gene70341.t1 | AT5G06839 | 44.660 | 309 | 154 | 3 | 65 | 356 | 108 | 416 | 2.93e-83 | 259 |
| MS.gene70341.t1 | AT1G68640 | 43.182 | 308 | 166 | 3 | 56 | 356 | 147 | 452 | 1.29e-74 | 238 |
| MS.gene70341.t1 | AT1G58330 | 26.906 | 223 | 146 | 6 | 139 | 346 | 3 | 223 | 2.91e-14 | 71.6 |
Find 72 sgRNAs with CRISPR-Local
Find 200 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATATCAGTGATATACAAAT+TGG | 0.178312 | 4.1:-9685202 | MS.gene70341:CDS |
| TGATTATTTAACTTCATTTC+AGG | 0.206692 | 4.1:+9687279 | None:intergenic |
| GGATTGGATTCTAATAATTT+AGG | 0.214016 | 4.1:-9686188 | MS.gene70341:CDS |
| TAAGAGTCGTTTGAAGAAAA+AGG | 0.214551 | 4.1:-9686483 | MS.gene70341:intron |
| TCTGTCAATGGTTCAATTAA+AGG | 0.231131 | 4.1:+9684909 | None:intergenic |
| CCATACACCAATTTACTATA+TGG | 0.242264 | 4.1:-9687344 | MS.gene70341:CDS |
| TGCTCGATGGCTGCTTGCTT+TGG | 0.257053 | 4.1:-9684387 | MS.gene70341:CDS |
| GTTCTTCCCATATAGTAAAT+TGG | 0.257991 | 4.1:+9687337 | None:intergenic |
| TAGTAACTTTGTTAGCTTCT+TGG | 0.286447 | 4.1:+9687095 | None:intergenic |
| ATTCCAACATTTGTCTGTTT+AGG | 0.286691 | 4.1:+9685245 | None:intergenic |
| TAGTCAGAGGATGCTTCTTT+TGG | 0.297753 | 4.1:-9687148 | MS.gene70341:CDS |
| CAAATTGGGGAACTTGTAAA+TGG | 0.313309 | 4.1:-9685187 | MS.gene70341:CDS |
| TTTGTTTCCTCAAGAAATAT+TGG | 0.341373 | 4.1:-9687378 | MS.gene70341:CDS |
| TTTGCTGGCTCTGTAAATTC+AGG | 0.350309 | 4.1:-9686164 | MS.gene70341:intron |
| AGCTAACAAAGTTACTAATA+AGG | 0.353635 | 4.1:-9687089 | MS.gene70341:intron |
| GCATGACTTCTCAAGATTAT+AGG | 0.355362 | 4.1:+9684869 | None:intergenic |
| AAATTGCAGGGATTGTATAT+TGG | 0.363352 | 4.1:-9686215 | MS.gene70341:intron |
| GTGTCGTTTAAAGCTGTTAC+AGG | 0.364560 | 4.1:-9686362 | MS.gene70341:CDS |
| GCTCGATGGCTGCTTGCTTT+GGG | 0.374474 | 4.1:-9684386 | MS.gene70341:CDS |
| CCATATAGTAAATTGGTGTA+TGG | 0.382687 | 4.1:+9687344 | None:intergenic |
| TGAAATGAAGTTAAATAATC+AGG | 0.391737 | 4.1:-9687277 | MS.gene70341:intron |
| ATTGTATATTGGTGGTGGAT+TGG | 0.406379 | 4.1:-9686204 | MS.gene70341:CDS |
| AATAGAGAGGCTGGAAGCTC+TGG | 0.410741 | 4.1:-9684730 | MS.gene70341:CDS |
| AGGTGTTACCTTTAGAAGTT+CGG | 0.411150 | 4.1:+9685030 | None:intergenic |
| ATATCAGTGATATACAAATT+GGG | 0.413722 | 4.1:-9685201 | MS.gene70341:CDS |
| CTGTCAATGGTTCAATTAAA+GGG | 0.420015 | 4.1:+9684910 | None:intergenic |
| TCGACCCTCCGAACTTCTAA+AGG | 0.428847 | 4.1:-9685038 | MS.gene70341:intron |
| AACCGTTGTTCCTCTGTCAA+TGG | 0.441867 | 4.1:+9684897 | None:intergenic |
| TAAGGGATTTGAGCAAACTT+TGG | 0.444298 | 4.1:-9684346 | MS.gene70341:CDS |
| GTGAATACTTTCAACGCCTA+AGG | 0.464354 | 4.1:-9684364 | MS.gene70341:CDS |
| TAACTTTGTTAGCTTCTTGG+TGG | 0.469542 | 4.1:+9687098 | None:intergenic |
| CATACACCAATTTACTATAT+GGG | 0.478931 | 4.1:-9687343 | MS.gene70341:CDS |
| AGATGCCCTTTCACAAGGTA+TGG | 0.480625 | 4.1:-9684835 | MS.gene70341:CDS |
| AGAGCTAGATCATACAAAAC+AGG | 0.481991 | 4.1:-9686332 | MS.gene70341:intron |
| GGATATTGCAATAGAGAGGC+TGG | 0.484290 | 4.1:-9684739 | MS.gene70341:CDS |
| AAAGGGCATCTTCTGCTTGT+CGG | 0.484492 | 4.1:+9684847 | None:intergenic |
| TCTGGCTAGCTTTGTGAACC+AGG | 0.487895 | 4.1:-9684712 | MS.gene70341:intron |
| CAGGGATTGTATATTGGTGG+TGG | 0.489623 | 4.1:-9686209 | MS.gene70341:CDS |
| CTTGTTGACACAGTTGCAGC+AGG | 0.514923 | 4.1:-9684795 | MS.gene70341:CDS |
| CATATAGTAAATTGGTGTAT+GGG | 0.519743 | 4.1:+9687345 | None:intergenic |
| AAAGTTTGCTCAAATCCCTT+AGG | 0.521782 | 4.1:+9684348 | None:intergenic |
| AGACCTAAACAGACAAATGT+TGG | 0.522384 | 4.1:-9685248 | MS.gene70341:CDS |
| TGCAGGTTCACGAGGACGAT+TGG | 0.528063 | 4.1:+9684322 | None:intergenic |
| TGAATACTTTCAACGCCTAA+GGG | 0.549102 | 4.1:-9684363 | MS.gene70341:CDS |
| ATGTGGAAAACAACAGCTGA+AGG | 0.550259 | 4.1:-9685085 | MS.gene70341:CDS |
| ACAAATTGAGAAGATGATGA+AGG | 0.553463 | 4.1:+9687396 | None:intergenic |
| AGACAAATGTTGGAATTGAA+AGG | 0.555362 | 4.1:-9685238 | MS.gene70341:CDS |
| ACAGGCTGATCATCTTCGAC+AGG | 0.558370 | 4.1:-9684453 | MS.gene70341:intron |
| GAAGAACATTTCAAGAGTAA+TGG | 0.562707 | 4.1:-9687321 | MS.gene70341:CDS |
| CTCTTGCATGAAGACTATGC+AGG | 0.569640 | 4.1:+9684305 | None:intergenic |
| CCGTACGTCAAACTGCTCGA+TGG | 0.578154 | 4.1:-9684400 | MS.gene70341:CDS |
| TATCAGTGATATACAAATTG+GGG | 0.581840 | 4.1:-9685200 | MS.gene70341:CDS |
| ATATACACCAATATTTCTTG+AGG | 0.587022 | 4.1:+9687371 | None:intergenic |
| AGGAACTTACATTCCACAGA+TGG | 0.589738 | 4.1:-9684760 | MS.gene70341:CDS |
| TTGCAGGGATTGTATATTGG+TGG | 0.592067 | 4.1:-9686212 | MS.gene70341:intron |
| TAAGATGGAGTATGAACACT+GGG | 0.600728 | 4.1:-9685275 | MS.gene70341:CDS |
| TGTTACCTTTAGAAGTTCGG+AGG | 0.601165 | 4.1:+9685033 | None:intergenic |
| TTAAGATGGAGTATGAACAC+TGG | 0.603260 | 4.1:-9685276 | MS.gene70341:CDS |
| AACCATTGACAGAGGAACAA+CGG | 0.614266 | 4.1:-9684899 | MS.gene70341:CDS |
| GCAGAAGATGCCCTTTCACA+AGG | 0.620831 | 4.1:-9684840 | MS.gene70341:CDS |
| TTTAATTGAACCATTGACAG+AGG | 0.625048 | 4.1:-9684907 | MS.gene70341:CDS |
| TCTATGTTATCACTGGCATG+TGG | 0.630097 | 4.1:-9685102 | MS.gene70341:CDS |
| CCATCGAGCAGTTTGACGTA+CGG | 0.630335 | 4.1:+9684400 | None:intergenic |
| TCTATTGCAATATCCATCTG+TGG | 0.636700 | 4.1:+9684747 | None:intergenic |
| GTTACCTTTAGAAGTTCGGA+GGG | 0.640489 | 4.1:+9685034 | None:intergenic |
| GCAGCAGGACAACTCGTCGA+AGG | 0.643270 | 4.1:-9684780 | MS.gene70341:CDS |
| GAAGACTATGCAGGTTCACG+AGG | 0.645466 | 4.1:+9684314 | None:intergenic |
| AGATGGATATTGCAATAGAG+AGG | 0.647680 | 4.1:-9684743 | MS.gene70341:CDS |
| TGTGGAAAACAACAGCTGAA+GGG | 0.647786 | 4.1:-9685084 | MS.gene70341:CDS |
| GTTTGAAATAGTGATTCATG+AGG | 0.660995 | 4.1:+9685164 | None:intergenic |
| ACGTCTCGCACAAAATCGAG+AGG | 0.680873 | 4.1:-9686513 | MS.gene70341:CDS |
| GATGGAGTATGAACACTGGG+TGG | 0.682481 | 4.1:-9685272 | MS.gene70341:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGTATAAATTTAGTAAACT+TGG | + | chr4.1:9684477-9684496 | None:intergenic | 15.0% |
| !! | TTGACAATAATAAACTTAAT+TGG | + | chr4.1:9687248-9687267 | None:intergenic | 15.0% |
| !!! | TAAGTTTTTATAAAGCAAAA+AGG | + | chr4.1:9685804-9685823 | None:intergenic | 15.0% |
| !!! | TGATATATAATATTAGCTTT+GGG | - | chr4.1:9686328-9686347 | MS.gene70341:intron | 15.0% |
| !!! | TTGATATATAATATTAGCTT+TGG | - | chr4.1:9686327-9686346 | MS.gene70341:intron | 15.0% |
| !! | AATATATAACATACATTACC+TGG | + | chr4.1:9687030-9687049 | None:intergenic | 20.0% |
| !! | ACAAAAGCAACATTAATTAA+AGG | + | chr4.1:9685955-9685974 | None:intergenic | 20.0% |
| !! | AGTAACAAAATTTATTAGAG+AGG | - | chr4.1:9686094-9686113 | MS.gene70341:intron | 20.0% |
| !! | ATATCAGTGATATACAAATT+GGG | - | chr4.1:9686520-9686539 | MS.gene70341:CDS | 20.0% |
| !! | CAAATTAAAAAGGTTAAACT+AGG | - | chr4.1:9687206-9687225 | MS.gene70341:intron | 20.0% |
| !! | CACAAATTACCAAATTAAAA+AGG | - | chr4.1:9687196-9687215 | MS.gene70341:intron | 20.0% |
| !! | CCTTTAACAAAATTTCAAAA+TGG | + | chr4.1:9684960-9684979 | None:intergenic | 20.0% |
| !! | GTAACAAAATTTATTAGAGA+GGG | - | chr4.1:9686095-9686114 | MS.gene70341:intron | 20.0% |
| !! | TAAGTTTATTATTGTCAAAC+AGG | - | chr4.1:9687250-9687269 | MS.gene70341:intron | 20.0% |
| !! | TGAAATGAAGTTAAATAATC+AGG | - | chr4.1:9684444-9684463 | MS.gene70341:CDS | 20.0% |
| !!! | AGAAATAACAACTTTTAAGA+TGG | - | chr4.1:9686431-9686450 | MS.gene70341:intron | 20.0% |
| !!! | AGTTGTTATTTCTGTAAATT+AGG | + | chr4.1:9686424-9686443 | None:intergenic | 20.0% |
| !!! | CCATTTTGAAATTTTGTTAA+AGG | - | chr4.1:9684957-9684976 | MS.gene70341:intron | 20.0% |
| !!! | CTAGTTTAACCTTTTTAATT+TGG | + | chr4.1:9687208-9687227 | None:intergenic | 20.0% |
| !!! | GAAATTTTGGAAGAAATTAT+TGG | + | chr4.1:9686177-9686196 | None:intergenic | 20.0% |
| !!! | TGATTATTTAACTTCATTTC+AGG | + | chr4.1:9684445-9684464 | None:intergenic | 20.0% |
| ! | AACATTAATTAAAGGAAAGG+AGG | + | chr4.1:9685947-9685966 | None:intergenic | 25.0% |
| ! | ACATTAATTAAAGGAAAGGA+GGG | + | chr4.1:9685946-9685965 | None:intergenic | 25.0% |
| ! | AGCAACATTAATTAAAGGAA+AGG | + | chr4.1:9685950-9685969 | None:intergenic | 25.0% |
| ! | AGCTAACAAAGTTACTAATA+AGG | - | chr4.1:9684632-9684651 | MS.gene70341:intron | 25.0% |
| ! | ATATACACCAATATTTCTTG+AGG | + | chr4.1:9684353-9684372 | None:intergenic | 25.0% |
| ! | CAAAAAAGTGATTTCATCAT+AGG | + | chr4.1:9685647-9685666 | None:intergenic | 25.0% |
| ! | CATACACCAATTTACTATAT+GGG | - | chr4.1:9684378-9684397 | MS.gene70341:CDS | 25.0% |
| ! | CATATAGTAAATTGGTGTAT+GGG | + | chr4.1:9684379-9684398 | None:intergenic | 25.0% |
| ! | CATATCAGTGATATACAAAT+TGG | - | chr4.1:9686519-9686538 | MS.gene70341:CDS | 25.0% |
| ! | CGTATAATTTAGATTAGATG+AGG | - | chr4.1:9687054-9687073 | MS.gene70341:intron | 25.0% |
| ! | GATATTGAACAATATGAAGT+AGG | + | chr4.1:9685443-9685462 | None:intergenic | 25.0% |
| ! | GGATTGGATTCTAATAATTT+AGG | - | chr4.1:9685533-9685552 | MS.gene70341:intron | 25.0% |
| ! | TATCAGTGATATACAAATTG+GGG | - | chr4.1:9686521-9686540 | MS.gene70341:CDS | 25.0% |
| ! | TTTGTTTCCTCAAGAAATAT+TGG | - | chr4.1:9684343-9684362 | MS.gene70341:CDS | 25.0% |
| !! | CTTACTGCAGATATATATTT+TGG | - | chr4.1:9685820-9685839 | MS.gene70341:intron | 25.0% |
| !! | TCAATCACATTAATCCATTT+TGG | - | chr4.1:9684881-9684900 | MS.gene70341:CDS | 25.0% |
| !! | TTTGGTAATTTGTGTGTTAA+TGG | + | chr4.1:9687190-9687209 | None:intergenic | 25.0% |
| !!! | GTTGGTTTGTTATTAAATTC+TGG | - | chr4.1:9685579-9685598 | MS.gene70341:intron | 25.0% |
| !!! | TCTAATAATTTAGGTTTTGC+TGG | - | chr4.1:9685542-9685561 | MS.gene70341:intron | 25.0% |
| !!! | TCTATTCTCAAACTAGTTTT+TGG | - | chr4.1:9686386-9686405 | MS.gene70341:CDS | 25.0% |
| !!! | TGCGTTTTTTTATGCTTATA+AGG | - | chr4.1:9685162-9685181 | MS.gene70341:CDS | 25.0% |
| !!! | TGTATGGACTATTTTTTACA+CGG | - | chr4.1:9684802-9684821 | MS.gene70341:CDS | 25.0% |
| AAATTGCAGGGATTGTATAT+TGG | - | chr4.1:9685506-9685525 | MS.gene70341:intron | 30.0% | |
| AACCTACAAAATCAACTACA+AGG | - | chr4.1:9685711-9685730 | MS.gene70341:intron | 30.0% | |
| ACAAATTGAGAAGATGATGA+AGG | + | chr4.1:9684328-9684347 | None:intergenic | 30.0% | |
| ACCTACAAAATCAACTACAA+GGG | - | chr4.1:9685712-9685731 | MS.gene70341:intron | 30.0% | |
| AGACAAATGTTGGAATTGAA+AGG | - | chr4.1:9686483-9686502 | MS.gene70341:intron | 30.0% | |
| ATCGATATACTTGATCAACA+TGG | - | chr4.1:9686715-9686734 | MS.gene70341:intron | 30.0% | |
| ATTCCAACATTTGTCTGTTT+AGG | + | chr4.1:9686479-9686498 | None:intergenic | 30.0% | |
| ATTGCTCAATCAGTATTTCA+TGG | - | chr4.1:9684986-9685005 | MS.gene70341:intron | 30.0% | |
| CCATACACCAATTTACTATA+TGG | - | chr4.1:9684377-9684396 | MS.gene70341:CDS | 30.0% | |
| CCATATAGTAAATTGGTGTA+TGG | + | chr4.1:9684380-9684399 | None:intergenic | 30.0% | |
| CTAAGTTTCTACAAAGTTTG+AGG | + | chr4.1:9685047-9685066 | None:intergenic | 30.0% | |
| CTGTCAATGGTTCAATTAAA+GGG | + | chr4.1:9686814-9686833 | None:intergenic | 30.0% | |
| GAAGAACATTTCAAGAGTAA+TGG | - | chr4.1:9684400-9684419 | MS.gene70341:CDS | 30.0% | |
| GAATAGAGTTCAATACAAGA+AGG | + | chr4.1:9686373-9686392 | None:intergenic | 30.0% | |
| GAATCAAATGCTTGTTTGTT+TGG | + | chr4.1:9685299-9685318 | None:intergenic | 30.0% | |
| GTTCTTCCCATATAGTAAAT+TGG | + | chr4.1:9684387-9684406 | None:intergenic | 30.0% | |
| TAAGAGTCGTTTGAAGAAAA+AGG | - | chr4.1:9685238-9685257 | MS.gene70341:CDS | 30.0% | |
| TCCATACATGTTTGATATGA+CGG | + | chr4.1:9684790-9684809 | None:intergenic | 30.0% | |
| TCGATATACTTGATCAACAT+GGG | - | chr4.1:9686716-9686735 | MS.gene70341:intron | 30.0% | |
| TCTGTCAATGGTTCAATTAA+AGG | + | chr4.1:9686815-9686834 | None:intergenic | 30.0% | |
| TGGATTCAGAGTTTCAAAAT+TGG | + | chr4.1:9686157-9686176 | None:intergenic | 30.0% | |
| TTAATGCAGAGAGAAATGTT+TGG | - | chr4.1:9686059-9686078 | MS.gene70341:intron | 30.0% | |
| TTGAACTTAACATTGCACAT+GGG | + | chr4.1:9684831-9684850 | None:intergenic | 30.0% | |
| TTTAATTGAACCATTGACAG+AGG | - | chr4.1:9686814-9686833 | MS.gene70341:intron | 30.0% | |
| ! | AGAGAGAAATGTTTGGAATA+AGG | - | chr4.1:9686066-9686085 | MS.gene70341:intron | 30.0% |
| ! | GATGTTTTCTATGTTATCAC+TGG | - | chr4.1:9686612-9686631 | MS.gene70341:intron | 30.0% |
| ! | GTTGATCAAGTATATCGATT+AGG | + | chr4.1:9686714-9686733 | None:intergenic | 30.0% |
| ! | GTTTGAAATAGTGATTCATG+AGG | + | chr4.1:9686560-9686579 | None:intergenic | 30.0% |
| ! | TAGTAACTTTGTTAGCTTCT+TGG | + | chr4.1:9684629-9684648 | None:intergenic | 30.0% |
| ! | TGGGTTGAACAAAATTAATG+TGG | + | chr4.1:9684767-9684786 | None:intergenic | 30.0% |
| ! | TTCCAAAATTTCAAGTAAGC+TGG | - | chr4.1:9686185-9686204 | MS.gene70341:CDS | 30.0% |
| ! | TTTTTCCATACCTTGTGAAA+GGG | + | chr4.1:9686894-9686913 | None:intergenic | 30.0% |
| !! | ACTGCAGATATATATTTTGG+TGG | - | chr4.1:9685823-9685842 | MS.gene70341:intron | 30.0% |
| !! | AGTTTTATCAGAAGTATGCA+TGG | - | chr4.1:9687152-9687171 | MS.gene70341:intron | 30.0% |
| !!! | AGCATTTTAGAACCACATTT+TGG | - | chr4.1:9685080-9685099 | MS.gene70341:CDS | 30.0% |
| !!! | GATGCTTCTTTTGGAATATT+GGG | - | chr4.1:9684582-9684601 | MS.gene70341:intron | 30.0% |
| !!! | GTATGGACTATTTTTTACAC+GGG | - | chr4.1:9684803-9684822 | MS.gene70341:CDS | 30.0% |
| !!! | TATGGACTATTTTTTACACG+GGG | - | chr4.1:9684804-9684823 | MS.gene70341:CDS | 30.0% |
| AAAAGGACATGCATGCAAAA+AGG | + | chr4.1:9685787-9685806 | None:intergenic | 35.0% | |
| AAAAGTCGACCAATCTGAAA+GGG | - | chr4.1:9684904-9684923 | MS.gene70341:CDS | 35.0% | |
| ACAAGGTATGGAAAAACTAC+AGG | - | chr4.1:9686898-9686917 | MS.gene70341:intron | 35.0% | |
| ACATCCAAAATTTGGAAGCA+GGG | + | chr4.1:9685136-9685155 | None:intergenic | 35.0% | |
| ACCGTCATATCAAACATGTA+TGG | - | chr4.1:9684786-9684805 | MS.gene70341:CDS | 35.0% | |
| AGACCTAAACAGACAAATGT+TGG | - | chr4.1:9686473-9686492 | MS.gene70341:intron | 35.0% | |
| AGAGCTAGATCATACAAAAC+AGG | - | chr4.1:9685389-9685408 | MS.gene70341:intron | 35.0% | |
| AGATGGATATTGCAATAGAG+AGG | - | chr4.1:9686978-9686997 | MS.gene70341:intron | 35.0% | |
| AGTGAGGTCATTGCTAAAAT+AGG | + | chr4.1:9685908-9685927 | None:intergenic | 35.0% | |
| ATACATGTTTGATATGACGG+TGG | + | chr4.1:9684787-9684806 | None:intergenic | 35.0% | |
| ATGTTTGTGATGAGATTTGC+AGG | - | chr4.1:9686781-9686800 | MS.gene70341:intron | 35.0% | |
| CAAATTGGGGAACTTGTAAA+TGG | - | chr4.1:9686534-9686553 | MS.gene70341:intron | 35.0% | |
| CAAGAAGGAAAACATACTCA+AGG | + | chr4.1:9686358-9686377 | None:intergenic | 35.0% | |
| CAAGGTATGGAAAAACTACA+GGG | - | chr4.1:9686899-9686918 | MS.gene70341:intron | 35.0% | |
| CACAAACATACATTATGCCA+TGG | + | chr4.1:9686770-9686789 | None:intergenic | 35.0% | |
| CGATATACTTGATCAACATG+GGG | - | chr4.1:9686717-9686736 | MS.gene70341:intron | 35.0% | |
| CTTGATGCAACAAAATTGCA+GGG | - | chr4.1:9685494-9685513 | MS.gene70341:intron | 35.0% | |
| GCATGACTTCTCAAGATTAT+AGG | + | chr4.1:9686855-9686874 | None:intergenic | 35.0% | |
| GTCGTTTGAAGAAAAAGGTT+TGG | - | chr4.1:9685243-9685262 | MS.gene70341:CDS | 35.0% | |
| GTTGAACTTAACATTGCACA+TGG | + | chr4.1:9684832-9684851 | None:intergenic | 35.0% | |
| TAAAACTTATACTCCTGCCA+TGG | + | chr4.1:9687139-9687158 | None:intergenic | 35.0% | |
| TAAGATGGAGTATGAACACT+GGG | - | chr4.1:9686446-9686465 | MS.gene70341:intron | 35.0% | |
| TAAGGGATTTGAGCAAACTT+TGG | - | chr4.1:9687375-9687394 | MS.gene70341:CDS | 35.0% | |
| TACATGTTTGATATGACGGT+GGG | + | chr4.1:9684786-9684805 | None:intergenic | 35.0% | |
| TCACACCAAAAAATTTCCAC+AGG | + | chr4.1:9686128-9686147 | None:intergenic | 35.0% | |
| TCTATTGCAATATCCATCTG+TGG | + | chr4.1:9686977-9686996 | None:intergenic | 35.0% | |
| TCTTGATGCAACAAAATTGC+AGG | - | chr4.1:9685493-9685512 | MS.gene70341:intron | 35.0% | |
| TGAATACTTTCAACGCCTAA+GGG | - | chr4.1:9687358-9687377 | MS.gene70341:CDS | 35.0% | |
| TGCTAAATACCTATAGTCAG+AGG | - | chr4.1:9684560-9684579 | MS.gene70341:intron | 35.0% | |
| TGTCACTGCTCTTATAAATG+TGG | - | chr4.1:9685617-9685636 | MS.gene70341:intron | 35.0% | |
| TTAAGATGGAGTATGAACAC+TGG | - | chr4.1:9686445-9686464 | MS.gene70341:intron | 35.0% | |
| TTAGACACTACATTCTGTTC+TGG | - | chr4.1:9686304-9686323 | MS.gene70341:intron | 35.0% | |
| TTAGATGAGGTTATGAGTAG+TGG | - | chr4.1:9687067-9687086 | MS.gene70341:intron | 35.0% | |
| TTGAGGCATAAGGAAAGAAT+GGG | + | chr4.1:9685030-9685049 | None:intergenic | 35.0% | |
| ! | AAAGTTTGCTCAAATCCCTT+AGG | + | chr4.1:9687376-9687395 | None:intergenic | 35.0% |
| ! | AGCCAGCTTACTTGAAATTT+TGG | + | chr4.1:9686190-9686209 | None:intergenic | 35.0% |
| ! | AGGTGTTACCTTTAGAAGTT+CGG | + | chr4.1:9686694-9686713 | None:intergenic | 35.0% |
| ! | GTTTTTCCATACCTTGTGAA+AGG | + | chr4.1:9686895-9686914 | None:intergenic | 35.0% |
| ! | TAACTTTGTTAGCTTCTTGG+TGG | + | chr4.1:9684626-9684645 | None:intergenic | 35.0% |
| ! | TCTACAAAGTTTGAGGCATA+AGG | + | chr4.1:9685040-9685059 | None:intergenic | 35.0% |
| ! | TTGTCGCTTCAACATAATCA+AGG | - | chr4.1:9684739-9684758 | MS.gene70341:CDS | 35.0% |
| ! | TTTGAGGCATAAGGAAAGAA+TGG | + | chr4.1:9685031-9685050 | None:intergenic | 35.0% |
| !! | ATTGGTCGACTTTTCCAAAA+TGG | + | chr4.1:9684898-9684917 | None:intergenic | 35.0% |
| !! | ATTGTATATTGGTGGTGGAT+TGG | - | chr4.1:9685517-9685536 | MS.gene70341:intron | 35.0% |
| !! | TCCCTTGTAGTTGATTTTGT+AGG | + | chr4.1:9685716-9685735 | None:intergenic | 35.0% |
| !!! | CTACTCCTGTGGAAATTTTT+TGG | - | chr4.1:9686120-9686139 | MS.gene70341:intron | 35.0% |
| !!! | GCAGATATATATTTTGGTGG+TGG | - | chr4.1:9685826-9685845 | MS.gene70341:intron | 35.0% |
| !!! | GGATGCTTCTTTTGGAATAT+TGG | - | chr4.1:9684581-9684600 | MS.gene70341:intron | 35.0% |
| AACCATTGACAGAGGAACAA+CGG | - | chr4.1:9686822-9686841 | MS.gene70341:intron | 40.0% | |
| AATAGGATTTGAGTAGCTGC+TGG | + | chr4.1:9685891-9685910 | None:intergenic | 40.0% | |
| AGGAACTTACATTCCACAGA+TGG | - | chr4.1:9686961-9686980 | MS.gene70341:intron | 40.0% | |
| ATGTGGAAAACAACAGCTGA+AGG | - | chr4.1:9686636-9686655 | MS.gene70341:intron | 40.0% | |
| CAAGCCAGACATCCAAAATT+TGG | + | chr4.1:9685144-9685163 | None:intergenic | 40.0% | |
| CATCCAAAATTTGGAAGCAG+GGG | + | chr4.1:9685135-9685154 | None:intergenic | 40.0% | |
| GAAAAGTCGACCAATCTGAA+AGG | - | chr4.1:9684903-9684922 | MS.gene70341:CDS | 40.0% | |
| GACACAACAGTTATGAGTAG+TGG | - | chr4.1:9687099-9687118 | MS.gene70341:CDS | 40.0% | |
| GACATCCAAAATTTGGAAGC+AGG | + | chr4.1:9685137-9685156 | None:intergenic | 40.0% | |
| GAGTATCTGAATGTACAGTG+AGG | + | chr4.1:9685924-9685943 | None:intergenic | 40.0% | |
| GATTCCTGACGTTTCATAAC+AGG | - | chr4.1:9685314-9685333 | MS.gene70341:intron | 40.0% | |
| GTGAATACTTTCAACGCCTA+AGG | - | chr4.1:9687357-9687376 | MS.gene70341:CDS | 40.0% | |
| TATGTTGAAGCGACAAAGTG+CGG | + | chr4.1:9684735-9684754 | None:intergenic | 40.0% | |
| TCTATGTTATCACTGGCATG+TGG | - | chr4.1:9686619-9686638 | MS.gene70341:intron | 40.0% | |
| TGCAAAGTGAGTCCAAAATG+TGG | + | chr4.1:9685095-9685114 | None:intergenic | 40.0% | |
| TGGAAAACAATGCTGATCCA+TGG | - | chr4.1:9687119-9687138 | MS.gene70341:CDS | 40.0% | |
| TGTGGAAAACAACAGCTGAA+GGG | - | chr4.1:9686637-9686656 | MS.gene70341:intron | 40.0% | |
| TTGCAGGGATTGTATATTGG+TGG | - | chr4.1:9685509-9685528 | MS.gene70341:intron | 40.0% | |
| ! | CTGCTGTCATATTTCTACCA+TGG | - | chr4.1:9686750-9686769 | MS.gene70341:intron | 40.0% |
| ! | GAAGGGTTTTTCTTGTGGAT+TGG | - | chr4.1:9686654-9686673 | MS.gene70341:intron | 40.0% |
| ! | GCTTCCAAATTTTGGATGTC+TGG | - | chr4.1:9685137-9685156 | MS.gene70341:CDS | 40.0% |
| ! | GTTACCTTTAGAAGTTCGGA+GGG | + | chr4.1:9686690-9686709 | None:intergenic | 40.0% |
| ! | TAGTCAGAGGATGCTTCTTT+TGG | - | chr4.1:9684573-9684592 | MS.gene70341:intron | 40.0% |
| ! | TGTTACCTTTAGAAGTTCGG+AGG | + | chr4.1:9686691-9686710 | None:intergenic | 40.0% |
| ! | TTGCTACTTGCTTGATATCG+CGG | - | chr4.1:9684665-9684684 | MS.gene70341:intron | 40.0% |
| !! | AAGAAGCATCCTCTGACTAT+AGG | + | chr4.1:9684572-9684591 | None:intergenic | 40.0% |
| !! | GTGTCGTTTAAAGCTGTTAC+AGG | - | chr4.1:9685359-9685378 | MS.gene70341:intron | 40.0% |
| !! | TTTGCTGGCTCTGTAAATTC+AGG | - | chr4.1:9685557-9685576 | MS.gene70341:intron | 40.0% |
| AAACAATGCTGATCCATGGC+AGG | - | chr4.1:9687123-9687142 | MS.gene70341:CDS | 45.0% | |
| AACCGTTGTTCCTCTGTCAA+TGG | + | chr4.1:9686827-9686846 | None:intergenic | 45.0% | |
| ACTTTGCACTGCAGATTAGG+AGG | - | chr4.1:9685107-9685126 | MS.gene70341:CDS | 45.0% | |
| AGATGCCCTTTCACAAGGTA+TGG | - | chr4.1:9686886-9686905 | MS.gene70341:intron | 45.0% | |
| AGGCCAATAAGCCCTAGTTT+AGG | + | chr4.1:9685853-9685872 | None:intergenic | 45.0% | |
| CAGGGATTGTATATTGGTGG+TGG | - | chr4.1:9685512-9685531 | MS.gene70341:intron | 45.0% | |
| CTCACTTTGCACTGCAGATT+AGG | - | chr4.1:9685104-9685123 | MS.gene70341:CDS | 45.0% | |
| CTTTGCACTGCAGATTAGGA+GGG | - | chr4.1:9685108-9685127 | MS.gene70341:CDS | 45.0% | |
| GCTATTATGTACCTAGTGGC+AGG | - | chr4.1:9686207-9686226 | MS.gene70341:CDS | 45.0% | |
| GCTGGCTATTATGTACCTAG+TGG | - | chr4.1:9686203-9686222 | MS.gene70341:CDS | 45.0% | |
| GGACCTAAACTAGGGCTTAT+TGG | - | chr4.1:9685847-9685866 | MS.gene70341:intron | 45.0% | |
| GGATATTGCAATAGAGAGGC+TGG | - | chr4.1:9686982-9687001 | MS.gene70341:intron | 45.0% | |
| GTGATGAGATTTGCAGGTTC+TGG | - | chr4.1:9686787-9686806 | MS.gene70341:intron | 45.0% | |
| TGAGCCTGTTATGAAACGTC+AGG | + | chr4.1:9685321-9685340 | None:intergenic | 45.0% | |
| ! | CAGCTGAAGGGTTTTTCTTG+TGG | - | chr4.1:9686649-9686668 | MS.gene70341:intron | 45.0% |
| !! | AAAGGGCATCTTCTGCTTGT+CGG | + | chr4.1:9686877-9686896 | None:intergenic | 45.0% |
| !! | CTGGCTCTGTAAATTCAGGT+TGG | - | chr4.1:9685561-9685580 | MS.gene70341:intron | 45.0% |
| !! | TTGGTGGTGGACCTAAACTA+GGG | - | chr4.1:9685839-9685858 | MS.gene70341:intron | 45.0% |
| !! | TTTGGTGGTGGACCTAAACT+AGG | - | chr4.1:9685838-9685857 | MS.gene70341:intron | 45.0% |
| !!! | GGGTTTTTCTTGTGGATTGG+AGG | - | chr4.1:9686657-9686676 | MS.gene70341:intron | 45.0% |
| AATAGAGAGGCTGGAAGCTC+TGG | - | chr4.1:9686991-9687010 | MS.gene70341:intron | 50.0% | |
| ACAGGCTGATCATCTTCGAC+AGG | - | chr4.1:9687268-9687287 | MS.gene70341:intron | 50.0% | |
| ACGTCTCGCACAAAATCGAG+AGG | - | chr4.1:9685208-9685227 | MS.gene70341:CDS | 50.0% | |
| CCATCGAGCAGTTTGACGTA+CGG | + | chr4.1:9687324-9687343 | None:intergenic | 50.0% | |
| CTTGTTGACACAGTTGCAGC+AGG | - | chr4.1:9686926-9686945 | MS.gene70341:intron | 50.0% | |
| GATGGAGTATGAACACTGGG+TGG | - | chr4.1:9686449-9686468 | MS.gene70341:intron | 50.0% | |
| GATTTGAGTAGCTGCTGGTC+TGG | + | chr4.1:9685886-9685905 | None:intergenic | 50.0% | |
| GCAGAAGATGCCCTTTCACA+AGG | - | chr4.1:9686881-9686900 | MS.gene70341:intron | 50.0% | |
| TCGACCCTCCGAACTTCTAA+AGG | - | chr4.1:9686683-9686702 | MS.gene70341:intron | 50.0% | |
| TCGCATCAGCCCTTTCAGAT+TGG | + | chr4.1:9684916-9684935 | None:intergenic | 50.0% | |
| TTGTACACAGTCCTGCCACT+AGG | + | chr4.1:9686221-9686240 | None:intergenic | 50.0% | |
| ! | GGCTTATTGGCCTCACCATT+GGG | - | chr4.1:9685860-9685879 | MS.gene70341:intron | 50.0% |
| ! | GGTCCCCTGCTTCCAAATTT+TGG | - | chr4.1:9685129-9685148 | MS.gene70341:CDS | 50.0% |
| !! | TAGAGAGGGTACTACTCCTG+TGG | - | chr4.1:9686109-9686128 | MS.gene70341:intron | 50.0% |
| !! | TCTGGCTAGCTTTGTGAACC+AGG | - | chr4.1:9687009-9687028 | MS.gene70341:intron | 50.0% |
| CCGTACGTCAAACTGCTCGA+TGG | - | chr4.1:9687321-9687340 | MS.gene70341:CDS | 55.0% | |
| GCTCGATGGCTGCTTGCTTT+GGG | - | chr4.1:9687335-9687354 | MS.gene70341:CDS | 55.0% | |
| TGCAGGTTCACGAGGACGAT+TGG | + | chr4.1:9687402-9687421 | None:intergenic | 55.0% | |
| TGCTCGATGGCTGCTTGCTT+TGG | - | chr4.1:9687334-9687353 | MS.gene70341:CDS | 55.0% | |
| ! | GGGCTTATTGGCCTCACCAT+TGG | - | chr4.1:9685859-9685878 | MS.gene70341:intron | 55.0% |
| GCAGCAGGACAACTCGTCGA+AGG | - | chr4.1:9686941-9686960 | MS.gene70341:intron | 60.0% | |
| ! | TAGCTGCTGGTCTGGCCCAA+TGG | + | chr4.1:9685878-9685897 | None:intergenic | 60.0% |
| ! | GCTGGTCTGGCCCAATGGTG+AGG | + | chr4.1:9685873-9685892 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 9684319 | 9687424 | 9684319 | ID=MS.gene70341 |
| chr4.1 | mRNA | 9684319 | 9687424 | 9684319 | ID=MS.gene70341.t1;Parent=MS.gene70341 |
| chr4.1 | exon | 9687278 | 9687424 | 9687278 | ID=MS.gene70341.t1.exon1;Parent=MS.gene70341.t1 |
| chr4.1 | CDS | 9687278 | 9687424 | 9687278 | ID=cds.MS.gene70341.t1;Parent=MS.gene70341.t1 |
| chr4.1 | exon | 9687090 | 9687167 | 9687090 | ID=MS.gene70341.t1.exon2;Parent=MS.gene70341.t1 |
| chr4.1 | CDS | 9687090 | 9687167 | 9687090 | ID=cds.MS.gene70341.t1;Parent=MS.gene70341.t1 |
| chr4.1 | exon | 9686484 | 9686543 | 9686484 | ID=MS.gene70341.t1.exon3;Parent=MS.gene70341.t1 |
| chr4.1 | CDS | 9686484 | 9686543 | 9686484 | ID=cds.MS.gene70341.t1;Parent=MS.gene70341.t1 |
| chr4.1 | exon | 9686333 | 9686407 | 9686333 | ID=MS.gene70341.t1.exon4;Parent=MS.gene70341.t1 |
| chr4.1 | CDS | 9686333 | 9686407 | 9686333 | ID=cds.MS.gene70341.t1;Parent=MS.gene70341.t1 |
| chr4.1 | exon | 9686165 | 9686228 | 9686165 | ID=MS.gene70341.t1.exon5;Parent=MS.gene70341.t1 |
| chr4.1 | CDS | 9686165 | 9686228 | 9686165 | ID=cds.MS.gene70341.t1;Parent=MS.gene70341.t1 |
| chr4.1 | exon | 9685039 | 9685310 | 9685039 | ID=MS.gene70341.t1.exon6;Parent=MS.gene70341.t1 |
| chr4.1 | CDS | 9685039 | 9685310 | 9685039 | ID=cds.MS.gene70341.t1;Parent=MS.gene70341.t1 |
| chr4.1 | exon | 9684713 | 9684940 | 9684713 | ID=MS.gene70341.t1.exon7;Parent=MS.gene70341.t1 |
| chr4.1 | CDS | 9684713 | 9684940 | 9684713 | ID=cds.MS.gene70341.t1;Parent=MS.gene70341.t1 |
| chr4.1 | exon | 9684319 | 9684471 | 9684319 | ID=MS.gene70341.t1.exon8;Parent=MS.gene70341.t1 |
| chr4.1 | CDS | 9684319 | 9684471 | 9684319 | ID=cds.MS.gene70341.t1;Parent=MS.gene70341.t1 |
| Gene Sequence |
| Protein sequence |
