Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene70650.t1 | AES71480.1 | 94.9 | 393 | 15 | 1 | 23 | 410 | 73 | 465 | 1.90E-227 | 798.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene70650.t1 | G7J4W2 | 94.9 | 393 | 15 | 1 | 23 | 410 | 73 | 465 | 1.4e-227 | 798.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050020 | MS.gene70650 | 0.824922 | 6.21E-54 | -1.69E-46 |
MS.gene050807 | MS.gene70650 | 0.818014 | 2.45E-52 | -1.69E-46 |
MS.gene050959 | MS.gene70650 | 0.821559 | 3.79E-53 | -1.69E-46 |
MS.gene051265 | MS.gene70650 | 0.806202 | 9.23E-50 | -1.69E-46 |
MS.gene051719 | MS.gene70650 | 0.806096 | 9.71E-50 | -1.69E-46 |
MS.gene051720 | MS.gene70650 | 0.812231 | 4.71E-51 | -1.69E-46 |
MS.gene052611 | MS.gene70650 | 0.81513 | 1.08E-51 | -1.69E-46 |
MS.gene052665 | MS.gene70650 | 0.802937 | 4.43E-49 | -1.69E-46 |
MS.gene053074 | MS.gene70650 | 0.80755 | 4.79E-50 | -1.69E-46 |
MS.gene055357 | MS.gene70650 | 0.821616 | 3.67E-53 | -1.69E-46 |
MS.gene055466 | MS.gene70650 | 0.813562 | 2.40E-51 | -1.69E-46 |
MS.gene058168 | MS.gene70650 | 0.823775 | 1.15E-53 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene70650.t1 | MTR_3g077430 | 94.458 | 415 | 16 | 2 | 1 | 410 | 53 | 465 | 0.0 | 793 |
MS.gene70650.t1 | MTR_4g105400 | 83.862 | 347 | 55 | 1 | 65 | 410 | 12 | 358 | 0.0 | 631 |
MS.gene70650.t1 | MTR_5g033650 | 72.877 | 365 | 90 | 5 | 53 | 410 | 4 | 366 | 0.0 | 556 |
MS.gene70650.t1 | MTR_8g069575 | 67.700 | 387 | 117 | 4 | 31 | 410 | 26 | 411 | 0.0 | 555 |
MS.gene70650.t1 | MTR_8g069600 | 58.730 | 378 | 142 | 5 | 45 | 410 | 18 | 393 | 7.25e-160 | 456 |
MS.gene70650.t1 | MTR_8g069610 | 53.717 | 417 | 177 | 7 | 1 | 410 | 7 | 414 | 1.47e-158 | 453 |
MS.gene70650.t1 | MTR_7g116420 | 56.522 | 391 | 141 | 8 | 48 | 409 | 49 | 439 | 1.67e-154 | 444 |
MS.gene70650.t1 | MTR_1g079730 | 55.112 | 401 | 142 | 9 | 48 | 410 | 51 | 451 | 1.22e-151 | 437 |
MS.gene70650.t1 | MTR_3g095890 | 53.041 | 411 | 162 | 9 | 8 | 409 | 45 | 433 | 5.83e-151 | 434 |
MS.gene70650.t1 | MTR_8g088510 | 54.712 | 382 | 149 | 8 | 51 | 409 | 35 | 415 | 7.23e-150 | 431 |
MS.gene70650.t1 | MTR_2g062610 | 54.381 | 388 | 151 | 8 | 48 | 410 | 40 | 426 | 8.05e-148 | 426 |
MS.gene70650.t1 | MTR_8g069720 | 48.921 | 417 | 186 | 9 | 4 | 410 | 8 | 407 | 2.09e-141 | 409 |
MS.gene70650.t1 | MTR_8g069580 | 54.424 | 373 | 141 | 5 | 46 | 410 | 43 | 394 | 7.43e-140 | 405 |
MS.gene70650.t1 | MTR_2g062610 | 59.091 | 308 | 114 | 5 | 114 | 410 | 30 | 336 | 4.63e-133 | 385 |
MS.gene70650.t1 | MTR_2g062610 | 59.091 | 308 | 114 | 5 | 114 | 410 | 37 | 343 | 6.72e-133 | 385 |
MS.gene70650.t1 | MTR_8g069590 | 58.389 | 298 | 122 | 2 | 114 | 410 | 9 | 305 | 2.07e-130 | 377 |
MS.gene70650.t1 | MTR_8g069640 | 47.585 | 414 | 193 | 9 | 4 | 409 | 7 | 404 | 1.01e-128 | 377 |
MS.gene70650.t1 | MTR_8g069660 | 47.549 | 408 | 197 | 10 | 6 | 410 | 7 | 400 | 3.33e-126 | 370 |
MS.gene70650.t1 | MTR_8g069715 | 50.270 | 370 | 163 | 9 | 53 | 410 | 50 | 410 | 2.31e-121 | 358 |
MS.gene70650.t1 | MTR_2g093840 | 50.301 | 332 | 141 | 11 | 90 | 410 | 42 | 360 | 2.15e-101 | 305 |
MS.gene70650.t1 | MTR_2g073040 | 56.107 | 262 | 103 | 6 | 31 | 286 | 14 | 269 | 1.05e-97 | 293 |
MS.gene70650.t1 | MTR_2g073020 | 51.698 | 265 | 119 | 3 | 27 | 286 | 22 | 282 | 8.88e-92 | 278 |
MS.gene70650.t1 | MTR_6g012620 | 39.500 | 400 | 208 | 10 | 41 | 410 | 15 | 410 | 1.11e-88 | 275 |
MS.gene70650.t1 | MTR_3g104000 | 40.306 | 392 | 197 | 11 | 52 | 410 | 30 | 417 | 9.13e-85 | 265 |
MS.gene70650.t1 | MTR_3g104030 | 39.286 | 392 | 203 | 10 | 42 | 406 | 27 | 410 | 3.84e-83 | 261 |
MS.gene70650.t1 | MTR_3g103980 | 37.949 | 390 | 206 | 10 | 52 | 410 | 51 | 435 | 2.76e-81 | 256 |
MS.gene70650.t1 | MTR_3g104070 | 37.811 | 402 | 198 | 14 | 42 | 405 | 29 | 416 | 5.97e-79 | 250 |
MS.gene70650.t1 | MTR_8g069695 | 44.000 | 250 | 134 | 4 | 164 | 410 | 13 | 259 | 7.33e-74 | 231 |
MS.gene70650.t1 | MTR_3g104030 | 39.252 | 321 | 167 | 7 | 110 | 406 | 30 | 346 | 3.24e-70 | 225 |
MS.gene70650.t1 | MTR_1g016910 | 36.188 | 362 | 198 | 10 | 78 | 410 | 63 | 420 | 4.21e-70 | 227 |
MS.gene70650.t1 | MTR_5g078580 | 34.365 | 323 | 191 | 7 | 45 | 359 | 28 | 337 | 2.32e-48 | 169 |
MS.gene70650.t1 | MTR_3g108680 | 32.386 | 352 | 195 | 11 | 8 | 357 | 22 | 332 | 2.79e-47 | 166 |
MS.gene70650.t1 | MTR_8g069630 | 55.814 | 129 | 56 | 1 | 283 | 410 | 1 | 129 | 3.26e-47 | 158 |
MS.gene70650.t1 | MTR_8g040850 | 30.673 | 401 | 224 | 13 | 36 | 406 | 14 | 390 | 4.34e-47 | 166 |
MS.gene70650.t1 | MTR_8g040890 | 30.789 | 393 | 228 | 12 | 51 | 404 | 31 | 418 | 1.89e-43 | 157 |
MS.gene70650.t1 | MTR_2g046390 | 31.714 | 350 | 202 | 13 | 68 | 404 | 43 | 368 | 1.88e-39 | 145 |
MS.gene70650.t1 | MTR_5g094280 | 34.211 | 266 | 164 | 7 | 48 | 313 | 24 | 278 | 3.82e-39 | 143 |
MS.gene70650.t1 | MTR_8g104480 | 32.277 | 347 | 203 | 15 | 72 | 404 | 9 | 337 | 2.15e-38 | 141 |
MS.gene70650.t1 | MTR_8g012985 | 37.557 | 221 | 124 | 8 | 194 | 404 | 21 | 237 | 2.98e-37 | 135 |
MS.gene70650.t1 | MTR_8g069750 | 51.639 | 122 | 56 | 3 | 219 | 337 | 151 | 272 | 5.61e-37 | 136 |
MS.gene70650.t1 | MTR_5g092260 | 28.827 | 392 | 234 | 13 | 27 | 406 | 26 | 384 | 1.80e-35 | 134 |
MS.gene70650.t1 | MTR_2g046520 | 35.246 | 244 | 140 | 10 | 175 | 406 | 3 | 240 | 2.46e-33 | 125 |
MS.gene70650.t1 | MTR_2g046430 | 34.836 | 244 | 141 | 10 | 175 | 406 | 3 | 240 | 2.69e-32 | 122 |
MS.gene70650.t1 | MTR_8g069665 | 57.955 | 88 | 35 | 1 | 63 | 150 | 107 | 192 | 1.16e-30 | 117 |
MS.gene70650.t1 | MTR_2g046300 | 30.372 | 349 | 193 | 15 | 68 | 404 | 43 | 353 | 1.15e-29 | 118 |
MS.gene70650.t1 | MTR_5g065260 | 28.879 | 232 | 153 | 5 | 177 | 404 | 3 | 226 | 1.69e-26 | 106 |
MS.gene70650.t1 | MTR_2g073050 | 57.746 | 71 | 29 | 1 | 340 | 410 | 1 | 70 | 1.17e-23 | 94.0 |
MS.gene70650.t1 | MTR_8g069950 | 72.222 | 54 | 15 | 0 | 238 | 291 | 58 | 111 | 2.17e-21 | 89.4 |
MS.gene70650.t1 | MTR_7g072230 | 32.955 | 176 | 103 | 7 | 238 | 402 | 34 | 205 | 8.96e-21 | 90.1 |
MS.gene70650.t1 | MTR_0009s0020 | 32.117 | 137 | 88 | 2 | 220 | 356 | 18 | 149 | 2.63e-19 | 84.3 |
MS.gene70650.t1 | MTR_2g046390 | 26.437 | 348 | 180 | 14 | 68 | 404 | 43 | 325 | 9.43e-19 | 87.0 |
MS.gene70650.t1 | MTR_5g065920 | 46.429 | 56 | 28 | 1 | 165 | 220 | 9 | 62 | 2.23e-11 | 59.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene70650.t1 | AT5G50150 | 72.396 | 384 | 96 | 5 | 35 | 410 | 39 | 420 | 0.0 | 590 |
MS.gene70650.t1 | AT1G70550 | 69.129 | 379 | 110 | 3 | 38 | 410 | 88 | 465 | 0.0 | 562 |
MS.gene70650.t1 | AT1G10750 | 68.602 | 379 | 112 | 3 | 38 | 410 | 90 | 467 | 0.0 | 561 |
MS.gene70650.t1 | AT1G23340 | 64.320 | 412 | 129 | 5 | 5 | 410 | 10 | 409 | 0.0 | 558 |
MS.gene70650.t1 | AT1G23340 | 64.320 | 412 | 129 | 5 | 5 | 410 | 10 | 409 | 0.0 | 558 |
MS.gene70650.t1 | AT1G55360 | 55.696 | 395 | 150 | 9 | 40 | 410 | 29 | 422 | 1.80e-155 | 446 |
MS.gene70650.t1 | AT3G13510 | 51.402 | 428 | 162 | 9 | 5 | 410 | 16 | 419 | 3.68e-153 | 439 |
MS.gene70650.t1 | AT5G18460 | 55.584 | 385 | 148 | 6 | 48 | 409 | 45 | 429 | 1.50e-149 | 431 |
MS.gene70650.t1 | AT5G56530 | 54.331 | 381 | 151 | 7 | 51 | 409 | 40 | 419 | 1.28e-148 | 428 |
MS.gene70650.t1 | AT5G56530 | 54.331 | 381 | 151 | 7 | 51 | 409 | 40 | 419 | 1.28e-148 | 428 |
MS.gene70650.t1 | AT2G44210 | 52.987 | 385 | 155 | 8 | 51 | 410 | 32 | 415 | 7.72e-144 | 416 |
MS.gene70650.t1 | AT2G44210 | 49.157 | 415 | 155 | 8 | 51 | 410 | 32 | 445 | 5.40e-139 | 404 |
MS.gene70650.t1 | AT2G44220 | 49.067 | 375 | 172 | 8 | 51 | 410 | 33 | 403 | 8.52e-126 | 369 |
MS.gene70650.t1 | AT1G23340 | 62.021 | 287 | 92 | 4 | 5 | 286 | 10 | 284 | 1.65e-125 | 365 |
MS.gene70650.t1 | AT2G44240 | 47.594 | 374 | 178 | 9 | 51 | 410 | 33 | 402 | 4.57e-116 | 345 |
MS.gene70650.t1 | AT2G17750 | 44.819 | 386 | 186 | 12 | 43 | 409 | 18 | 395 | 7.28e-111 | 331 |
MS.gene70650.t1 | AT2G19360 | 44.416 | 394 | 181 | 9 | 52 | 409 | 34 | 425 | 8.87e-106 | 319 |
MS.gene70650.t1 | AT3G48230 | 45.787 | 356 | 177 | 7 | 65 | 410 | 24 | 373 | 2.40e-105 | 316 |
MS.gene70650.t1 | AT2G44250 | 45.889 | 377 | 180 | 9 | 52 | 409 | 37 | 408 | 3.38e-101 | 307 |
MS.gene70650.t1 | AT5G19170 | 42.857 | 364 | 188 | 7 | 50 | 404 | 13 | 365 | 2.10e-95 | 291 |
MS.gene70650.t1 | AT1G70550 | 67.317 | 205 | 61 | 2 | 38 | 237 | 88 | 291 | 2.40e-95 | 288 |
MS.gene70650.t1 | AT2G44250 | 46.178 | 314 | 157 | 6 | 106 | 409 | 14 | 325 | 3.58e-85 | 263 |
MS.gene70650.t1 | AT1G10750 | 56.000 | 225 | 92 | 3 | 38 | 256 | 90 | 313 | 1.15e-80 | 252 |
MS.gene70650.t1 | AT5G25950 | 37.592 | 407 | 212 | 9 | 38 | 410 | 34 | 432 | 2.58e-80 | 254 |
MS.gene70650.t1 | AT5G25960 | 35.065 | 385 | 196 | 8 | 38 | 410 | 15 | 357 | 3.09e-68 | 220 |
MS.gene70650.t1 | AT2G20170 | 35.523 | 411 | 229 | 13 | 8 | 404 | 8 | 396 | 3.10e-68 | 221 |
MS.gene70650.t1 | AT2G20170 | 35.523 | 411 | 229 | 13 | 8 | 404 | 8 | 396 | 3.10e-68 | 221 |
MS.gene70650.t1 | AT2G20170 | 33.090 | 411 | 222 | 13 | 8 | 404 | 8 | 379 | 1.59e-58 | 196 |
MS.gene70650.t1 | AT4G23360 | 32.620 | 374 | 219 | 13 | 52 | 404 | 38 | 399 | 2.68e-57 | 193 |
MS.gene70650.t1 | AT4G23370 | 34.048 | 373 | 218 | 14 | 53 | 404 | 36 | 401 | 3.90e-57 | 193 |
MS.gene70650.t1 | AT4G23390 | 33.495 | 412 | 237 | 15 | 9 | 404 | 7 | 397 | 1.78e-55 | 188 |
MS.gene70650.t1 | AT4G23380 | 31.830 | 399 | 231 | 15 | 27 | 404 | 20 | 398 | 4.78e-55 | 187 |
MS.gene70650.t1 | AT4G23350 | 31.536 | 371 | 228 | 13 | 52 | 404 | 38 | 400 | 1.03e-54 | 186 |
MS.gene70650.t1 | AT4G23365 | 31.903 | 373 | 222 | 14 | 52 | 404 | 38 | 398 | 1.74e-54 | 186 |
MS.gene70650.t1 | AT4G23355 | 31.892 | 370 | 226 | 14 | 52 | 404 | 38 | 398 | 1.71e-53 | 183 |
MS.gene70650.t1 | AT2G35250 | 34.006 | 347 | 199 | 9 | 64 | 406 | 19 | 339 | 1.26e-48 | 169 |
MS.gene70650.t1 | AT4G15050 | 31.070 | 383 | 211 | 18 | 51 | 404 | 36 | 394 | 4.94e-40 | 147 |
MS.gene70650.t1 | AT1G10190 | 30.905 | 398 | 220 | 18 | 38 | 404 | 21 | 394 | 2.18e-38 | 143 |
MS.gene70650.t1 | AT2G27320 | 32.881 | 295 | 167 | 11 | 71 | 361 | 30 | 297 | 2.76e-37 | 138 |
MS.gene70650.t1 | AT4G17505 | 28.000 | 350 | 193 | 11 | 67 | 410 | 25 | 321 | 1.10e-36 | 136 |
MS.gene70650.t1 | AT4G15053 | 29.948 | 384 | 217 | 15 | 51 | 404 | 40 | 401 | 2.21e-36 | 137 |
MS.gene70650.t1 | AT5G46820 | 28.056 | 360 | 224 | 13 | 60 | 404 | 8 | 347 | 3.49e-36 | 135 |
MS.gene70650.t1 | AT4G10220 | 28.571 | 427 | 244 | 19 | 2 | 404 | 9 | 398 | 2.21e-35 | 135 |
MS.gene70650.t1 | AT5G46810 | 27.222 | 360 | 233 | 12 | 61 | 404 | 3 | 349 | 2.34e-35 | 134 |
MS.gene70650.t1 | AT2G24950 | 28.723 | 376 | 224 | 16 | 52 | 404 | 55 | 409 | 3.17e-34 | 132 |
MS.gene70650.t1 | AT5G46200 | 26.098 | 387 | 231 | 12 | 48 | 386 | 6 | 385 | 1.71e-30 | 121 |
MS.gene70650.t1 | AT4G23373 | 33.195 | 241 | 131 | 10 | 57 | 289 | 40 | 258 | 6.85e-30 | 117 |
MS.gene70650.t1 | AT5G60380 | 27.350 | 351 | 219 | 15 | 72 | 409 | 44 | 371 | 1.11e-29 | 118 |
MS.gene70650.t1 | AT5G25410 | 27.566 | 341 | 218 | 13 | 72 | 404 | 44 | 363 | 4.49e-29 | 117 |
MS.gene70650.t1 | AT5G05030 | 26.330 | 376 | 232 | 18 | 47 | 406 | 13 | 359 | 1.64e-27 | 112 |
MS.gene70650.t1 | AT4G10210 | 27.163 | 416 | 241 | 20 | 2 | 391 | 9 | 388 | 2.39e-27 | 112 |
MS.gene70650.t1 | AT4G17860 | 27.066 | 351 | 210 | 15 | 72 | 404 | 29 | 351 | 5.45e-26 | 108 |
MS.gene70650.t1 | AT2G38255 | 31.527 | 203 | 116 | 6 | 72 | 273 | 14 | 194 | 1.84e-25 | 103 |
MS.gene70650.t1 | AT5G11660 | 26.962 | 293 | 193 | 9 | 122 | 406 | 25 | 304 | 1.01e-23 | 100 |
MS.gene70650.t1 | AT4G23080 | 26.207 | 435 | 256 | 21 | 1 | 406 | 8 | 406 | 3.02e-23 | 101 |
MS.gene70650.t1 | AT2G03930 | 42.857 | 105 | 56 | 3 | 161 | 263 | 40 | 142 | 1.84e-19 | 85.5 |
MS.gene70650.t1 | AT5G25415 | 28.571 | 252 | 142 | 10 | 175 | 406 | 99 | 332 | 2.45e-19 | 89.0 |
MS.gene70650.t1 | AT5G36680 | 26.490 | 302 | 187 | 13 | 122 | 409 | 51 | 331 | 3.10e-19 | 88.6 |
MS.gene70650.t1 | AT5G36770 | 26.490 | 302 | 187 | 13 | 122 | 409 | 51 | 331 | 3.10e-19 | 88.6 |
MS.gene70650.t1 | AT5G04937 | 28.774 | 212 | 125 | 7 | 200 | 404 | 6 | 198 | 8.62e-17 | 79.0 |
MS.gene70650.t1 | AT5G37520 | 30.857 | 175 | 107 | 7 | 236 | 405 | 33 | 198 | 1.44e-16 | 78.2 |
Find 103 sgRNAs with CRISPR-Local
Find 194 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TAGTATCCCTTTGGCCTTTC+TGG | 0.032761 | 3.1:+63648916 | None:intergenic |
TTTGATCATCCTAAGCTTAA+AGG | 0.172683 | 3.1:-63649061 | MS.gene70650:CDS |
ATCCAAGGTTCTTCACTTAT+TGG | 0.181219 | 3.1:-63647734 | MS.gene70650:CDS |
GATTGTGAATGCTCGTTCTA+AGG | 0.242059 | 3.1:-63646574 | MS.gene70650:CDS |
TAAATCCTTCTTCTGCAAAA+TGG | 0.251332 | 3.1:+63646520 | None:intergenic |
TTGCTATCTTGTTGTTAGTT+TGG | 0.257816 | 3.1:+63647553 | None:intergenic |
GAATCTCTCCGTACAGGTTT+TGG | 0.268183 | 3.1:+63648751 | None:intergenic |
TTTCAGCTGTGGACTGATTC+TGG | 0.270068 | 3.1:-63648865 | MS.gene70650:CDS |
AGCAGGGTAATAACAATGTT+TGG | 0.280005 | 3.1:-63646389 | MS.gene70650:CDS |
AACCGTGGACAGTTTGATAT+TGG | 0.280369 | 3.1:-63647498 | MS.gene70650:CDS |
AGCCAGCAATAACCCATATC+TGG | 0.287768 | 3.1:+63648083 | None:intergenic |
AATTTAGCTTGTCCCAGATA+TGG | 0.289493 | 3.1:-63648096 | MS.gene70650:CDS |
TGGGTTATTGCTGGCTCCTT+TGG | 0.293081 | 3.1:-63648076 | MS.gene70650:CDS |
GCAAGTTCTATCAAAAGATT+TGG | 0.293382 | 3.1:-63648781 | MS.gene70650:CDS |
TCTTCTGTTGTTCTTCTGAT+TGG | 0.306036 | 3.1:+63648817 | None:intergenic |
TGCTACAACTTATTGTGTTC+AGG | 0.306061 | 3.1:-63647582 | MS.gene70650:CDS |
GCAGGGTAATAACAATGTTT+GGG | 0.312146 | 3.1:-63646388 | MS.gene70650:CDS |
ACTAACAACAAGATAGCAAT+AGG | 0.320394 | 3.1:-63647549 | MS.gene70650:CDS |
CTGCTTAATGTTATAACAAT+TGG | 0.320834 | 3.1:+63646407 | None:intergenic |
GAAACTTACAAGTCATTGAT+TGG | 0.334217 | 3.1:-63646479 | MS.gene70650:CDS |
TTGATATTGGCATAATGATT+TGG | 0.339854 | 3.1:-63647485 | MS.gene70650:CDS |
GGGCATTTCACATTTCTTCC+AGG | 0.340470 | 3.1:+63646342 | None:intergenic |
CAAACATGTTTAGTCACTTA+AGG | 0.351583 | 3.1:-63646629 | MS.gene70650:CDS |
TTGATCATCCTAAGCTTAAA+GGG | 0.352738 | 3.1:-63649060 | MS.gene70650:CDS |
TCCCAGATATGGGTTATTGC+TGG | 0.354056 | 3.1:-63648085 | MS.gene70650:CDS |
CTGATTGGAACAGTTCCTTC+TGG | 0.362002 | 3.1:+63648832 | None:intergenic |
ATAAGTCTGGTTAGTCTTCA+AGG | 0.365189 | 3.1:+63649470 | None:intergenic |
GTAAATGGAAATCAATACTT+TGG | 0.375350 | 3.1:-63648169 | MS.gene70650:CDS |
GAGGATTATTAGTTGGATAC+TGG | 0.382244 | 3.1:-63646656 | MS.gene70650:CDS |
CTGAACCTGCTTTATAAGTC+TGG | 0.386950 | 3.1:+63649457 | None:intergenic |
CATGCAAGCATGGTACAATT+TGG | 0.389315 | 3.1:-63646603 | MS.gene70650:CDS |
CCATTGTTGTAGTATCCCTT+TGG | 0.394843 | 3.1:+63648907 | None:intergenic |
AACCACCAGTGTCCATGCTT+TGG | 0.397011 | 3.1:+63646687 | None:intergenic |
GGTTTATGCCCTTTAAGCTT+AGG | 0.407567 | 3.1:+63649052 | None:intergenic |
CCACACATTTATGTTTGCCT+TGG | 0.423813 | 3.1:+63648144 | None:intergenic |
AAGTGACTAAACATGTTTGC+TGG | 0.424031 | 3.1:+63646633 | None:intergenic |
ATTTAGCTTGTCCCAGATAT+GGG | 0.425371 | 3.1:-63648095 | MS.gene70650:CDS |
TAGTTGTCACCATACAGTTC+TGG | 0.435890 | 3.1:+63647756 | None:intergenic |
TCTTGCTAATATTCATCACT+TGG | 0.440337 | 3.1:-63646439 | MS.gene70650:CDS |
GAGTACGGAGGATTATTAGT+TGG | 0.443449 | 3.1:-63646663 | MS.gene70650:CDS |
ACAGATGCATATCAAACAAC+TGG | 0.449731 | 3.1:-63647606 | MS.gene70650:CDS |
CAATCTATCAAATCACCATC+TGG | 0.451064 | 3.1:+63649109 | None:intergenic |
TACTCTAGAAGCTGGTTGGC+AGG | 0.457414 | 3.1:-63648041 | MS.gene70650:intron |
GGCATTTCACATTTCTTCCA+GGG | 0.458404 | 3.1:+63646343 | None:intergenic |
CACGGTTATAAGCTGATGTA+GGG | 0.467774 | 3.1:+63647514 | None:intergenic |
CTAACAACAAGATAGCAATA+GGG | 0.470151 | 3.1:-63647548 | MS.gene70650:CDS |
AAACTTACAAGTCATTGATT+GGG | 0.470160 | 3.1:-63646478 | MS.gene70650:CDS |
CAATTGTTATAACATTAAGC+AGG | 0.472121 | 3.1:-63646406 | MS.gene70650:CDS |
TTACCACACCGACACTCAAA+TGG | 0.474382 | 3.1:-63646550 | MS.gene70650:CDS |
TATCCCTTTGGCCTTTCTGG+TGG | 0.482974 | 3.1:+63648919 | None:intergenic |
ATACTACAACAATGGAGAAA+AGG | 0.486967 | 3.1:-63648899 | MS.gene70650:CDS |
CCAAAGGGATACTACAACAA+TGG | 0.490175 | 3.1:-63648907 | MS.gene70650:CDS |
AGCTTAGGATGATCAAAAGC+TGG | 0.492216 | 3.1:+63649067 | None:intergenic |
TAAGTCTGGTTAGTCTTCAA+GGG | 0.494109 | 3.1:+63649471 | None:intergenic |
CCACGGTTATAAGCTGATGT+AGG | 0.497933 | 3.1:+63647513 | None:intergenic |
CTAATTGAATCTCTCCGTAC+AGG | 0.512104 | 3.1:+63648745 | None:intergenic |
ATTGTGAATGCTCGTTCTAA+GGG | 0.526045 | 3.1:-63646573 | MS.gene70650:CDS |
GCCACTTCCCATTTGAGTGT+CGG | 0.531546 | 3.1:+63646542 | None:intergenic |
GTCCAATAAGTGAAGAACCT+TGG | 0.534669 | 3.1:+63647732 | None:intergenic |
GATCTGAATACTCTAGAAGC+TGG | 0.535306 | 3.1:-63648049 | MS.gene70650:CDS |
GCTTAAAGGGCATAAACCAC+TGG | 0.535463 | 3.1:-63649047 | MS.gene70650:intron |
GTGGCTAGAATCTGAGACAA+TGG | 0.543283 | 3.1:+63649494 | None:intergenic |
CTTAAGGAGTCATGCAAGCA+TGG | 0.548826 | 3.1:-63646613 | MS.gene70650:CDS |
GCCAGCAATAACCCATATCT+GGG | 0.550061 | 3.1:+63648084 | None:intergenic |
GCAAGCATGGTACAATTTGG+TGG | 0.552322 | 3.1:-63646600 | MS.gene70650:CDS |
TGAATACTCTAGAAGCTGGT+TGG | 0.552623 | 3.1:-63648045 | MS.gene70650:CDS |
CAGGTAAGTCCAGAACTGTA+TGG | 0.555180 | 3.1:-63647765 | MS.gene70650:CDS |
TACCACACCGACACTCAAAT+GGG | 0.555983 | 3.1:-63646549 | MS.gene70650:CDS |
GTTCTATCAAAAGATTTGGA+AGG | 0.566425 | 3.1:-63648777 | MS.gene70650:CDS |
TTCAATTAGCAGTGATCATG+AGG | 0.571226 | 3.1:-63648731 | MS.gene70650:intron |
AATTGTTATAACATTAAGCA+GGG | 0.572505 | 3.1:-63646405 | MS.gene70650:CDS |
TATTGGCATAATGATTTGGA+AGG | 0.580599 | 3.1:-63647481 | MS.gene70650:intron |
AAATCAATACTTTGGAGCCA+AGG | 0.583744 | 3.1:-63648161 | MS.gene70650:CDS |
GATCCACCAGAAAGGCCAAA+GGG | 0.583977 | 3.1:-63648922 | MS.gene70650:CDS |
ACCGACACTCAAATGGGAAG+TGG | 0.587290 | 3.1:-63646543 | MS.gene70650:CDS |
GGACACTGGTGGTTAGAGTA+CGG | 0.591126 | 3.1:-63646678 | MS.gene70650:CDS |
AAGTGATGAATATTAGCAAG+AGG | 0.592167 | 3.1:+63646441 | None:intergenic |
GAAGGAAACCAAAACCTGTA+CGG | 0.593940 | 3.1:-63648759 | MS.gene70650:CDS |
TAACAACAAGATAGCAATAG+GGG | 0.596202 | 3.1:-63647547 | MS.gene70650:CDS |
TGCCAATATCAAACTGTCCA+CGG | 0.597797 | 3.1:+63647496 | None:intergenic |
ACTTTGTATCAGAGTCCAGA+TGG | 0.600213 | 3.1:-63649124 | MS.gene70650:intron |
CCAAGGCAAACATAAATGTG+TGG | 0.602971 | 3.1:-63648144 | MS.gene70650:CDS |
GTTTACAGGATCCACCAGAA+AGG | 0.603971 | 3.1:-63648930 | MS.gene70650:intron |
ACTAACCAGACTTATAAAGC+AGG | 0.607754 | 3.1:-63649462 | MS.gene70650:CDS |
TGTGAACAGGATCCAAAGCA+TGG | 0.614621 | 3.1:-63646699 | MS.gene70650:intron |
CAAGGCAAACATAAATGTGT+GGG | 0.616077 | 3.1:-63648143 | MS.gene70650:CDS |
TTCCCATTTGAGTGTCGGTG+TGG | 0.620291 | 3.1:+63646547 | None:intergenic |
TTAATGAGAAGTTTCAGCTG+TGG | 0.623212 | 3.1:-63648876 | MS.gene70650:CDS |
AAGTCTGGTTAGTCTTCAAG+GGG | 0.632401 | 3.1:+63649472 | None:intergenic |
TGTATGGTGACAACTATCCA+AGG | 0.640778 | 3.1:-63647749 | MS.gene70650:CDS |
TCATATCCATCTGTTACATG+AGG | 0.644566 | 3.1:+63648118 | None:intergenic |
CAGGGTAATAACAATGTTTG+GGG | 0.644781 | 3.1:-63646387 | MS.gene70650:CDS |
TCTGGTTAGTCTTCAAGGGG+TGG | 0.644987 | 3.1:+63649475 | None:intergenic |
TGATGAGAGTGAGACAATGC+TGG | 0.646817 | 3.1:+63649519 | None:intergenic |
AGTATTCAGATCATTACCAA+AGG | 0.647857 | 3.1:+63648060 | None:intergenic |
AGGATCCAAAGCATGGACAC+TGG | 0.649017 | 3.1:-63646692 | MS.gene70650:CDS |
TCTGGTGAAGAATGTCCAGA+AGG | 0.650833 | 3.1:-63648847 | MS.gene70650:CDS |
GGATCCACCAGAAAGGCCAA+AGG | 0.651755 | 3.1:-63648923 | MS.gene70650:CDS |
TGGGCACCTCATGTAACAGA+TGG | 0.656951 | 3.1:-63648124 | MS.gene70650:CDS |
ATCCAAAGCATGGACACTGG+TGG | 0.664040 | 3.1:-63646689 | MS.gene70650:CDS |
ACGGTTATAAGCTGATGTAG+GGG | 0.689573 | 3.1:+63647515 | None:intergenic |
CCTACATCAGCTTATAACCG+TGG | 0.701785 | 3.1:-63647513 | MS.gene70650:CDS |
CACTGGTGGTTAGAGTACGG+AGG | 0.713683 | 3.1:-63646675 | MS.gene70650:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | CTTTTTGATATTGAATTTTA+AGG | + | chr3.1:63647209-63647228 | None:intergenic | 15.0% |
!! | AAAAGTAGTAAGATTAATCA+TGG | + | chr3.1:63649040-63649059 | None:intergenic | 20.0% |
!! | AACAATAAACAAACAAAAAC+AGG | + | chr3.1:63646347-63646366 | None:intergenic | 20.0% |
!! | AATTAGAAAAAGAAACATCA+TGG | + | chr3.1:63648879-63648898 | None:intergenic | 20.0% |
!! | AATTGTTATAACATTAAGCA+GGG | - | chr3.1:63649503-63649522 | MS.gene70650:CDS | 20.0% |
!! | ATTGGAAATATGTGTTAAAA+AGG | + | chr3.1:63648974-63648993 | None:intergenic | 20.0% |
!! | CCATACAAAATTTATAAATC+AGG | - | chr3.1:63646907-63646926 | MS.gene70650:intron | 20.0% |
!! | GTTAATTATGTTGTAAACTA+TGG | - | chr3.1:63647342-63647361 | MS.gene70650:intron | 20.0% |
!! | TTAAATATTAGTACAATGCA+AGG | - | chr3.1:63649170-63649189 | MS.gene70650:intron | 20.0% |
!!! | AATTTTGCTATGAAATTGAA+AGG | + | chr3.1:63648572-63648591 | None:intergenic | 20.0% |
!!! | CCTGATTTATAAATTTTGTA+TGG | + | chr3.1:63646910-63646929 | None:intergenic | 20.0% |
!!! | CTAATTTTTCTTTCATCAAT+AGG | - | chr3.1:63647432-63647451 | MS.gene70650:intron | 20.0% |
!!! | GATAAATTTTGACAACAATT+TGG | - | chr3.1:63647291-63647310 | MS.gene70650:intron | 20.0% |
!!! | GATTTTCCTAAAATGTATTT+TGG | - | chr3.1:63649078-63649097 | MS.gene70650:CDS | 20.0% |
!!! | TAAAATAGTGGTTTTATGAT+TGG | + | chr3.1:63648992-63649011 | None:intergenic | 20.0% |
! | AAAAGAAACATCATGGTTAT+TGG | + | chr3.1:63648872-63648891 | None:intergenic | 25.0% |
! | AAATAAAGTAAACTCCACTA+AGG | + | chr3.1:63648750-63648769 | None:intergenic | 25.0% |
! | AAATTGTGCATTCATTTATG+AGG | - | chr3.1:63647397-63647416 | MS.gene70650:intron | 25.0% |
! | AACAACGCAATTCAAATATA+TGG | - | chr3.1:63647320-63647339 | MS.gene70650:intron | 25.0% |
! | ACTCAATTCAACAATAATCA+AGG | - | chr3.1:63648467-63648486 | MS.gene70650:intron | 25.0% |
! | CAATTGTTATAACATTAAGC+AGG | - | chr3.1:63649502-63649521 | MS.gene70650:CDS | 25.0% |
! | CTGCTTAATGTTATAACAAT+TGG | + | chr3.1:63649504-63649523 | None:intergenic | 25.0% |
! | GGTTAATTGTCTTAAAATAG+TGG | + | chr3.1:63649004-63649023 | None:intergenic | 25.0% |
! | GTAAATGGAAATCAATACTT+TGG | - | chr3.1:63647739-63647758 | MS.gene70650:CDS | 25.0% |
! | GTTATTGAAATTATTACCAG+TGG | + | chr3.1:63646880-63646899 | None:intergenic | 25.0% |
! | TCAACATTCTTTGTAACTAT+TGG | + | chr3.1:63648913-63648932 | None:intergenic | 25.0% |
! | TCCAGCAAAAACTAAAAAAA+TGG | - | chr3.1:63647650-63647669 | MS.gene70650:intron | 25.0% |
! | TGCATACTAGTGATAATTTA+GGG | + | chr3.1:63647916-63647935 | None:intergenic | 25.0% |
! | TTAAGATCAATTACGACTAA+TGG | - | chr3.1:63647993-63648012 | MS.gene70650:intron | 25.0% |
! | TTATTAAATGAAGCATGAAG+TGG | + | chr3.1:63647945-63647964 | None:intergenic | 25.0% |
! | TTGATATTGGCATAATGATT+TGG | - | chr3.1:63648423-63648442 | MS.gene70650:intron | 25.0% |
! | TTGCATACTAGTGATAATTT+AGG | + | chr3.1:63647917-63647936 | None:intergenic | 25.0% |
!! | AAACTTACAAGTCATTGATT+GGG | - | chr3.1:63649430-63649449 | MS.gene70650:CDS | 25.0% |
!! | ATTAAGTTGTTTATCGAAAC+AGG | + | chr3.1:63648020-63648039 | None:intergenic | 25.0% |
!! | CATGCAATTCTTTTTGTAAA+TGG | - | chr3.1:63647724-63647743 | MS.gene70650:intron | 25.0% |
!! | CATTGACCAAAATACATTTT+AGG | + | chr3.1:63649087-63649106 | None:intergenic | 25.0% |
!!! | AATTTTGACAACAATTTGGA+TGG | - | chr3.1:63647295-63647314 | MS.gene70650:intron | 25.0% |
!!! | ATTTCTAGAATCTAGTTAGT+AGG | - | chr3.1:63648080-63648099 | MS.gene70650:CDS | 25.0% |
!!! | GATTAATCTTACTACTTTTG+TGG | - | chr3.1:63649041-63649060 | MS.gene70650:intron | 25.0% |
!!! | GCTTTAAAAAAGAAACAGTA+AGG | + | chr3.1:63648778-63648797 | None:intergenic | 25.0% |
!!! | GGAACTTATTTTTATTATGG+AGG | - | chr3.1:63649542-63649561 | MS.gene70650:CDS | 25.0% |
!!! | TATGCCTTTGTTGAATTTTT+TGG | - | chr3.1:63648717-63648736 | MS.gene70650:intron | 25.0% |
!!! | TCCATTTTTTTAGTTTTTGC+TGG | + | chr3.1:63647654-63647673 | None:intergenic | 25.0% |
!!! | TGGGGAACTTATTTTTATTA+TGG | - | chr3.1:63649539-63649558 | MS.gene70650:CDS | 25.0% |
AAATCAATGCACAAGAAAAG+AGG | + | chr3.1:63648256-63648275 | None:intergenic | 30.0% | |
AACTCACAAGGCTTATATAA+TGG | - | chr3.1:63648523-63648542 | MS.gene70650:intron | 30.0% | |
AAGTCATAAATTACACGAGA+AGG | - | chr3.1:63647578-63647597 | MS.gene70650:CDS | 30.0% | |
AAGTGATGAATATTAGCAAG+AGG | + | chr3.1:63649470-63649489 | None:intergenic | 30.0% | |
ACTAACAACAAGATAGCAAT+AGG | - | chr3.1:63648359-63648378 | MS.gene70650:intron | 30.0% | |
AGTATTCAGATCATTACCAA+AGG | + | chr3.1:63647851-63647870 | None:intergenic | 30.0% | |
AGTTACAAAGAATGTTGAAC+AGG | - | chr3.1:63648915-63648934 | MS.gene70650:CDS | 30.0% | |
ATACTACAACAATGGAGAAA+AGG | - | chr3.1:63647009-63647028 | MS.gene70650:intron | 30.0% | |
ATACTAGTGATAATTTAGGG+AGG | + | chr3.1:63647913-63647932 | None:intergenic | 30.0% | |
CAAACATGTTTAGTCACTTA+AGG | - | chr3.1:63649279-63649298 | MS.gene70650:intron | 30.0% | |
CAAGAAAAGAGGTTGAAATA+AGG | + | chr3.1:63648245-63648264 | None:intergenic | 30.0% | |
CTAACAACAAGATAGCAATA+GGG | - | chr3.1:63648360-63648379 | MS.gene70650:intron | 30.0% | |
CTGGAAAAGTTATACATGTT+TGG | + | chr3.1:63647635-63647654 | None:intergenic | 30.0% | |
GAAACTTACAAGTCATTGAT+TGG | - | chr3.1:63649429-63649448 | MS.gene70650:CDS | 30.0% | |
GCAAGTTCTATCAAAAGATT+TGG | - | chr3.1:63647127-63647146 | MS.gene70650:intron | 30.0% | |
GTTCTATCAAAAGATTTGGA+AGG | - | chr3.1:63647131-63647150 | MS.gene70650:intron | 30.0% | |
TAAATCCTTCTTCTGCAAAA+TGG | + | chr3.1:63649391-63649410 | None:intergenic | 30.0% | |
TAACAACAAGATAGCAATAG+GGG | - | chr3.1:63648361-63648380 | MS.gene70650:intron | 30.0% | |
TACTAGTGATAATTTAGGGA+GGG | + | chr3.1:63647912-63647931 | None:intergenic | 30.0% | |
TATTCAACTTTGTCATTGAG+TGG | + | chr3.1:63649128-63649147 | None:intergenic | 30.0% | |
TCTTGCTAATATTCATCACT+TGG | - | chr3.1:63649469-63649488 | MS.gene70650:CDS | 30.0% | |
TGTAAGCTATATCTTTCTTC+AGG | - | chr3.1:63648124-63648143 | MS.gene70650:CDS | 30.0% | |
TTACTGACATTGAGTATGTT+TGG | - | chr3.1:63646582-63646601 | MS.gene70650:CDS | 30.0% | |
TTGATCATCCTAAGCTTAAA+GGG | - | chr3.1:63646848-63646867 | MS.gene70650:intron | 30.0% | |
TTTGATCATCCTAAGCTTAA+AGG | - | chr3.1:63646847-63646866 | MS.gene70650:intron | 30.0% | |
! | ATTGTTTTCATGAACGATCA+TGG | + | chr3.1:63646712-63646731 | None:intergenic | 30.0% |
! | CTTGTACCTACATTGATTAT+TGG | - | chr3.1:63647606-63647625 | MS.gene70650:CDS | 30.0% |
! | TATTGGCATAATGATTTGGA+AGG | - | chr3.1:63648427-63648446 | MS.gene70650:intron | 30.0% |
! | TTCTTTTTGCTTAACTCACA+AGG | - | chr3.1:63648511-63648530 | MS.gene70650:intron | 30.0% |
!! | TAATCTTACTACTTTTGTGG+TGG | - | chr3.1:63649044-63649063 | MS.gene70650:intron | 30.0% |
!! | TTGCTATCTTGTTGTTAGTT+TGG | + | chr3.1:63648358-63648377 | None:intergenic | 30.0% |
!!! | CAGGCTTATTGATTTTTTTG+AGG | + | chr3.1:63646508-63646527 | None:intergenic | 30.0% |
!!! | CTGTTTCTTTTTTAAAGCAG+TGG | - | chr3.1:63648780-63648799 | MS.gene70650:CDS | 30.0% |
AAGAGACAAACAAACACAAG+TGG | + | chr3.1:63647535-63647554 | None:intergenic | 35.0% | |
AAGTGACTAAACATGTTTGC+TGG | + | chr3.1:63649278-63649297 | None:intergenic | 35.0% | |
AATCATGGCAAATACACTTG+TGG | + | chr3.1:63649025-63649044 | None:intergenic | 35.0% | |
AATGTCAGTAACAATGTCAC+TGG | + | chr3.1:63646573-63646592 | None:intergenic | 35.0% | |
ACAGATGCATATCAAACAAC+TGG | - | chr3.1:63648302-63648321 | MS.gene70650:intron | 35.0% | |
ACTAACCAGACTTATAAAGC+AGG | - | chr3.1:63646446-63646465 | MS.gene70650:CDS | 35.0% | |
ACTAGTGATAATTTAGGGAG+GGG | + | chr3.1:63647911-63647930 | None:intergenic | 35.0% | |
AGCAGGGTAATAACAATGTT+TGG | - | chr3.1:63649519-63649538 | MS.gene70650:CDS | 35.0% | |
ATCCAAGGTTCTTCACTTAT+TGG | - | chr3.1:63648174-63648193 | MS.gene70650:CDS | 35.0% | |
ATTGTGAATGCTCGTTCTAA+GGG | - | chr3.1:63649335-63649354 | MS.gene70650:intron | 35.0% | |
CAAGGCAAACATAAATGTGT+GGG | - | chr3.1:63647765-63647784 | MS.gene70650:CDS | 35.0% | |
CAATCTATCAAATCACCATC+TGG | + | chr3.1:63646802-63646821 | None:intergenic | 35.0% | |
CAGGGTAATAACAATGTTTG+GGG | - | chr3.1:63649521-63649540 | MS.gene70650:CDS | 35.0% | |
GACAGAAAGTAAGAGGATTA+AGG | - | chr3.1:63646956-63646975 | MS.gene70650:intron | 35.0% | |
GAGGATTATTAGTTGGATAC+TGG | - | chr3.1:63649252-63649271 | MS.gene70650:intron | 35.0% | |
GCAGGGTAATAACAATGTTT+GGG | - | chr3.1:63649520-63649539 | MS.gene70650:CDS | 35.0% | |
GCTGAAAAATCATTGTGAAC+AGG | - | chr3.1:63649196-63649215 | MS.gene70650:intron | 35.0% | |
GTAAGAGGATTAAGGTTTAC+AGG | - | chr3.1:63646964-63646983 | MS.gene70650:intron | 35.0% | |
TCATATCCATCTGTTACATG+AGG | + | chr3.1:63647793-63647812 | None:intergenic | 35.0% | |
TCTTCTGTTGTTCTTCTGAT+TGG | + | chr3.1:63647094-63647113 | None:intergenic | 35.0% | |
TGCTACAACTTATTGTGTTC+AGG | - | chr3.1:63648326-63648345 | MS.gene70650:intron | 35.0% | |
TGGCATCCAATAATCAATGT+AGG | + | chr3.1:63647615-63647634 | None:intergenic | 35.0% | |
TTAATGAGAAGTTTCAGCTG+TGG | - | chr3.1:63647032-63647051 | MS.gene70650:intron | 35.0% | |
TTCAATTAGCAGTGATCATG+AGG | - | chr3.1:63647177-63647196 | MS.gene70650:intron | 35.0% | |
TTTGAGAGACAGAAAGTAAG+AGG | - | chr3.1:63646949-63646968 | MS.gene70650:intron | 35.0% | |
! | TGTTCTTTTCTTACTGGCAA+AGG | + | chr3.1:63647480-63647499 | None:intergenic | 35.0% |
! | TTCACGCTTAACTTTTATGC+TGG | - | chr3.1:63648803-63648822 | MS.gene70650:CDS | 35.0% |
!! | AAATCAATACTTTGGAGCCA+AGG | - | chr3.1:63647747-63647766 | MS.gene70650:CDS | 35.0% |
!! | AATTTAGCTTGTCCCAGATA+TGG | - | chr3.1:63647812-63647831 | MS.gene70650:intron | 35.0% |
!! | ATAAGTCTGGTTAGTCTTCA+AGG | + | chr3.1:63646441-63646460 | None:intergenic | 35.0% |
!! | ATTTAGCTTGTCCCAGATAT+GGG | - | chr3.1:63647813-63647832 | MS.gene70650:intron | 35.0% |
!! | TAAGTCTGGTTAGTCTTCAA+GGG | + | chr3.1:63646440-63646459 | None:intergenic | 35.0% |
!! | TAGTGCTGTTCTTTTCTTAC+TGG | + | chr3.1:63647486-63647505 | None:intergenic | 35.0% |
!! | TATGCTGGTCTTACTGTATA+TGG | - | chr3.1:63648818-63648837 | MS.gene70650:CDS | 35.0% |
!! | TATTTTTATTATGGAGGCCC+TGG | - | chr3.1:63649548-63649567 | MS.gene70650:CDS | 35.0% |
!!! | CCTTTGTTGAATTTTTTGGC+GGG | - | chr3.1:63648721-63648740 | MS.gene70650:intron | 35.0% |
!!! | CTTTGTTGAATTTTTTGGCG+GGG | - | chr3.1:63648722-63648741 | MS.gene70650:intron | 35.0% |
!!! | GCCTTTGTTGAATTTTTTGG+CGG | - | chr3.1:63648720-63648739 | MS.gene70650:intron | 35.0% |
!!! | TTTGTTGAATTTTTTGGCGG+GGG | - | chr3.1:63648723-63648742 | MS.gene70650:intron | 35.0% |
AACCGTGGACAGTTTGATAT+TGG | - | chr3.1:63648410-63648429 | MS.gene70650:intron | 40.0% | |
ACGGTTATAAGCTGATGTAG+GGG | + | chr3.1:63648396-63648415 | None:intergenic | 40.0% | |
ACTACCTTAACAGACAGTGA+AGG | - | chr3.1:63647502-63647521 | MS.gene70650:CDS | 40.0% | |
ACTTTGTATCAGAGTCCAGA+TGG | - | chr3.1:63646784-63646803 | MS.gene70650:intron | 40.0% | |
AGCTTAGGATGATCAAAAGC+TGG | + | chr3.1:63646844-63646863 | None:intergenic | 40.0% | |
CACGGTTATAAGCTGATGTA+GGG | + | chr3.1:63648397-63648416 | None:intergenic | 40.0% | |
CATGCAAGCATGGTACAATT+TGG | - | chr3.1:63649305-63649324 | MS.gene70650:intron | 40.0% | |
CCAAAGGGATACTACAACAA+TGG | - | chr3.1:63647001-63647020 | MS.gene70650:intron | 40.0% | |
CCAAGGCAAACATAAATGTG+TGG | - | chr3.1:63647764-63647783 | MS.gene70650:CDS | 40.0% | |
CCACACATTTATGTTTGCCT+TGG | + | chr3.1:63647767-63647786 | None:intergenic | 40.0% | |
CCATTGTTGTAGTATCCCTT+TGG | + | chr3.1:63647004-63647023 | None:intergenic | 40.0% | |
CCCGCCAAAAAATTCAACAA+AGG | + | chr3.1:63648724-63648743 | None:intergenic | 40.0% | |
CTAATTGAATCTCTCCGTAC+AGG | + | chr3.1:63647166-63647185 | None:intergenic | 40.0% | |
CTACCTTAACAGACAGTGAA+GGG | - | chr3.1:63647503-63647522 | MS.gene70650:CDS | 40.0% | |
CTGAACCTGCTTTATAAGTC+TGG | + | chr3.1:63646454-63646473 | None:intergenic | 40.0% | |
CTTACTGGCAAAGGAAATGT+GGG | + | chr3.1:63647471-63647490 | None:intergenic | 40.0% | |
GAAGGAAACCAAAACCTGTA+CGG | - | chr3.1:63647149-63647168 | MS.gene70650:intron | 40.0% | |
GAGTACGGAGGATTATTAGT+TGG | - | chr3.1:63649245-63649264 | MS.gene70650:intron | 40.0% | |
GATTGTGAATGCTCGTTCTA+AGG | - | chr3.1:63649334-63649353 | MS.gene70650:intron | 40.0% | |
GGCATTTCACATTTCTTCCA+GGG | + | chr3.1:63649568-63649587 | None:intergenic | 40.0% | |
GGTTTATGCCCTTTAAGCTT+AGG | + | chr3.1:63646859-63646878 | None:intergenic | 40.0% | |
GTCCAATAAGTGAAGAACCT+TGG | + | chr3.1:63648179-63648198 | None:intergenic | 40.0% | |
TAGTTGTCACCATACAGTTC+TGG | + | chr3.1:63648155-63648174 | None:intergenic | 40.0% | |
TCAATGTGTCTCTACTCTAG+TGG | - | chr3.1:63649101-63649120 | MS.gene70650:CDS | 40.0% | |
TCTTACTGGCAAAGGAAATG+TGG | + | chr3.1:63647472-63647491 | None:intergenic | 40.0% | |
TGCCAATATCAAACTGTCCA+CGG | + | chr3.1:63648415-63648434 | None:intergenic | 40.0% | |
TGTATGGTGACAACTATCCA+AGG | - | chr3.1:63648159-63648178 | MS.gene70650:CDS | 40.0% | |
TTACTGGCAAAGGAAATGTG+GGG | + | chr3.1:63647470-63647489 | None:intergenic | 40.0% | |
! | GATCTGAATACTCTAGAAGC+TGG | - | chr3.1:63647859-63647878 | MS.gene70650:intron | 40.0% |
! | TAGGGAGGGGAAAAAGTATA+TGG | + | chr3.1:63647898-63647917 | None:intergenic | 40.0% |
! | TGAATACTCTAGAAGCTGGT+TGG | - | chr3.1:63647863-63647882 | MS.gene70650:intron | 40.0% |
!! | AAGTCTGGTTAGTCTTCAAG+GGG | + | chr3.1:63646439-63646458 | None:intergenic | 40.0% |
!! | TCTTACTACTTTTGTGGTGG+TGG | - | chr3.1:63649047-63649066 | MS.gene70650:intron | 40.0% |
AGCCAGCAATAACCCATATC+TGG | + | chr3.1:63647828-63647847 | None:intergenic | 45.0% | |
CAGGTAAGTCCAGAACTGTA+TGG | - | chr3.1:63648143-63648162 | MS.gene70650:CDS | 45.0% | |
CCACGGTTATAAGCTGATGT+AGG | + | chr3.1:63648398-63648417 | None:intergenic | 45.0% | |
CCTACATCAGCTTATAACCG+TGG | - | chr3.1:63648395-63648414 | MS.gene70650:intron | 45.0% | |
CTGATTGGAACAGTTCCTTC+TGG | + | chr3.1:63647079-63647098 | None:intergenic | 45.0% | |
CTTAAGGAGTCATGCAAGCA+TGG | - | chr3.1:63649295-63649314 | MS.gene70650:intron | 45.0% | |
GCAAGCATGGTACAATTTGG+TGG | - | chr3.1:63649308-63649327 | MS.gene70650:intron | 45.0% | |
GCCAGCAATAACCCATATCT+GGG | + | chr3.1:63647827-63647846 | None:intergenic | 45.0% | |
GGGCATTTCACATTTCTTCC+AGG | + | chr3.1:63649569-63649588 | None:intergenic | 45.0% | |
GTTTACAGGATCCACCAGAA+AGG | - | chr3.1:63646978-63646997 | MS.gene70650:intron | 45.0% | |
TACCACACCGACACTCAAAT+GGG | - | chr3.1:63649359-63649378 | MS.gene70650:intron | 45.0% | |
TCTGGTGAAGAATGTCCAGA+AGG | - | chr3.1:63647061-63647080 | MS.gene70650:intron | 45.0% | |
TGATGAGAGTGAGACAATGC+TGG | + | chr3.1:63646392-63646411 | None:intergenic | 45.0% | |
TGTCCCTTCACTGTCTGTTA+AGG | + | chr3.1:63647509-63647528 | None:intergenic | 45.0% | |
TGTGAACAGGATCCAAAGCA+TGG | - | chr3.1:63649209-63649228 | MS.gene70650:intron | 45.0% | |
TTACCACACCGACACTCAAA+TGG | - | chr3.1:63649358-63649377 | MS.gene70650:intron | 45.0% | |
! | GAATCTCTCCGTACAGGTTT+TGG | + | chr3.1:63647160-63647179 | None:intergenic | 45.0% |
! | GCTTAAAGGGCATAAACCAC+TGG | - | chr3.1:63646861-63646880 | MS.gene70650:intron | 45.0% |
! | GTGGCTAGAATCTGAGACAA+TGG | + | chr3.1:63646417-63646436 | None:intergenic | 45.0% |
! | TAGTATCCCTTTGGCCTTTC+TGG | + | chr3.1:63646995-63647014 | None:intergenic | 45.0% |
! | TCCCAGATATGGGTTATTGC+TGG | - | chr3.1:63647823-63647842 | MS.gene70650:intron | 45.0% |
! | TTTCAGCTGTGGACTGATTC+TGG | - | chr3.1:63647043-63647062 | MS.gene70650:intron | 45.0% |
!! | AGTGGCCATTTTGCAGAAGA+AGG | - | chr3.1:63649383-63649402 | MS.gene70650:intron | 45.0% |
!!! | ACTACTTTTGTGGTGGTGGT+TGG | - | chr3.1:63649051-63649070 | MS.gene70650:CDS | 45.0% |
!! | AAAATATTAAAAATAAACAA+AGG | + | chr3.1:63647969-63647988 | None:intergenic | 5.0% |
!! | AATATTAATATAACATAAAA+AGG | + | chr3.1:63648674-63648693 | None:intergenic | 5.0% |
AACCACCAGTGTCCATGCTT+TGG | + | chr3.1:63649224-63649243 | None:intergenic | 50.0% | |
ACCGACACTCAAATGGGAAG+TGG | - | chr3.1:63649365-63649384 | MS.gene70650:intron | 50.0% | |
AGGATCCAAAGCATGGACAC+TGG | - | chr3.1:63649216-63649235 | MS.gene70650:intron | 50.0% | |
ATCCAAAGCATGGACACTGG+TGG | - | chr3.1:63649219-63649238 | MS.gene70650:intron | 50.0% | |
GATCCACCAGAAAGGCCAAA+GGG | - | chr3.1:63646986-63647005 | MS.gene70650:intron | 50.0% | |
GCCACTTCCCATTTGAGTGT+CGG | + | chr3.1:63649369-63649388 | None:intergenic | 50.0% | |
GCCTGAATTGTCTTCACAGC+AGG | + | chr3.1:63646527-63646546 | None:intergenic | 50.0% | |
GCCTGCTGTGAAGACAATTC+AGG | - | chr3.1:63646523-63646542 | MS.gene70650:CDS | 50.0% | |
GGACACTGGTGGTTAGAGTA+CGG | - | chr3.1:63649230-63649249 | MS.gene70650:intron | 50.0% | |
TGGGCACCTCATGTAACAGA+TGG | - | chr3.1:63647784-63647803 | MS.gene70650:intron | 50.0% | |
! | TACTCTAGAAGCTGGTTGGC+AGG | - | chr3.1:63647867-63647886 | MS.gene70650:intron | 50.0% |
! | TATCCCTTTGGCCTTTCTGG+TGG | + | chr3.1:63646992-63647011 | None:intergenic | 50.0% |
!! | TCTGGTTAGTCTTCAAGGGG+TGG | + | chr3.1:63646436-63646455 | None:intergenic | 50.0% |
!! | TGGGTTATTGCTGGCTCCTT+TGG | - | chr3.1:63647832-63647851 | MS.gene70650:intron | 50.0% |
!! | TTCCCATTTGAGTGTCGGTG+TGG | + | chr3.1:63649364-63649383 | None:intergenic | 50.0% |
!!! | TTTTGTGGTGGTGGTTGGTG+TGG | - | chr3.1:63649056-63649075 | MS.gene70650:CDS | 50.0% |
CACTGGTGGTTAGAGTACGG+AGG | - | chr3.1:63649233-63649252 | MS.gene70650:intron | 55.0% | |
GGATCCACCAGAAAGGCCAA+AGG | - | chr3.1:63646985-63647004 | MS.gene70650:intron | 55.0% | |
!! | TTTTTGGCGGGGGACCTTAG+TGG | - | chr3.1:63648733-63648752 | MS.gene70650:CDS | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.1 | gene | 63646338 | 63649592 | 63646338 | ID=MS.gene70650 |
chr3.1 | mRNA | 63646338 | 63649592 | 63646338 | ID=MS.gene70650.t1;Parent=MS.gene70650 |
chr3.1 | exon | 63649401 | 63649592 | 63649401 | ID=MS.gene70650.t1.exon1;Parent=MS.gene70650.t1 |
chr3.1 | CDS | 63649401 | 63649592 | 63649401 | ID=cds.MS.gene70650.t1;Parent=MS.gene70650.t1 |
chr3.1 | exon | 63649048 | 63649134 | 63649048 | ID=MS.gene70650.t1.exon2;Parent=MS.gene70650.t1 |
chr3.1 | CDS | 63649048 | 63649134 | 63649048 | ID=cds.MS.gene70650.t1;Parent=MS.gene70650.t1 |
chr3.1 | exon | 63648732 | 63648944 | 63648732 | ID=MS.gene70650.t1.exon3;Parent=MS.gene70650.t1 |
chr3.1 | CDS | 63648732 | 63648944 | 63648732 | ID=cds.MS.gene70650.t1;Parent=MS.gene70650.t1 |
chr3.1 | exon | 63648042 | 63648206 | 63648042 | ID=MS.gene70650.t1.exon4;Parent=MS.gene70650.t1 |
chr3.1 | CDS | 63648042 | 63648206 | 63648042 | ID=cds.MS.gene70650.t1;Parent=MS.gene70650.t1 |
chr3.1 | exon | 63647731 | 63647784 | 63647731 | ID=MS.gene70650.t1.exon5;Parent=MS.gene70650.t1 |
chr3.1 | CDS | 63647731 | 63647784 | 63647731 | ID=cds.MS.gene70650.t1;Parent=MS.gene70650.t1 |
chr3.1 | exon | 63647482 | 63647628 | 63647482 | ID=MS.gene70650.t1.exon6;Parent=MS.gene70650.t1 |
chr3.1 | CDS | 63647482 | 63647628 | 63647482 | ID=cds.MS.gene70650.t1;Parent=MS.gene70650.t1 |
chr3.1 | exon | 63646338 | 63646712 | 63646338 | ID=MS.gene70650.t1.exon7;Parent=MS.gene70650.t1 |
chr3.1 | CDS | 63646338 | 63646712 | 63646338 | ID=cds.MS.gene70650.t1;Parent=MS.gene70650.t1 |
Gene Sequence |
Protein sequence |