Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71133.t1 | XP_013443616.1 | 98.6 | 514 | 5 | 1 | 1 | 514 | 1 | 512 | 5.60E-285 | 989.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71133.t1 | Q9C5L3 | 73.1 | 505 | 117 | 6 | 16 | 510 | 14 | 509 | 1.7e-205 | 716.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71133.t1 | A0A072TKB2 | 98.6 | 514 | 5 | 1 | 1 | 514 | 1 | 512 | 4.0e-285 | 989.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene71133 | MS.gene71995 | PPI |
| MS.gene71133 | MS.gene72354 | PPI |
| MS.gene71133 | MS.gene011574 | PPI |
| MS.gene043783 | MS.gene71133 | PPI |
| MS.gene71133 | MS.gene78188 | PPI |
| MS.gene71133 | MS.gene61281 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71133.t1 | MTR_0004s0650 | 98.638 | 514 | 5 | 1 | 1 | 514 | 1 | 512 | 0.0 | 1022 |
| MS.gene71133.t1 | MTR_4g099450 | 56.947 | 511 | 173 | 7 | 10 | 505 | 3 | 481 | 0.0 | 557 |
| MS.gene71133.t1 | MTR_2g460810 | 54.678 | 481 | 188 | 4 | 33 | 500 | 24 | 487 | 0.0 | 519 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71133.t1 | AT3G47420 | 72.157 | 510 | 125 | 5 | 14 | 513 | 12 | 514 | 0.0 | 726 |
| MS.gene71133.t1 | AT3G47420 | 72.157 | 510 | 125 | 5 | 14 | 513 | 12 | 514 | 0.0 | 726 |
| MS.gene71133.t1 | AT3G47420 | 72.157 | 510 | 125 | 5 | 14 | 513 | 12 | 514 | 0.0 | 726 |
| MS.gene71133.t1 | AT1G30560 | 61.000 | 500 | 173 | 4 | 19 | 511 | 18 | 502 | 0.0 | 603 |
| MS.gene71133.t1 | AT4G25220 | 64.375 | 480 | 146 | 4 | 19 | 495 | 18 | 475 | 0.0 | 602 |
| MS.gene71133.t1 | AT4G17550 | 55.854 | 521 | 184 | 5 | 19 | 499 | 12 | 526 | 0.0 | 552 |
| MS.gene71133.t1 | AT2G13100 | 57.442 | 477 | 174 | 4 | 33 | 497 | 22 | 481 | 0.0 | 540 |
| MS.gene71133.t1 | AT2G13100 | 57.442 | 477 | 174 | 4 | 33 | 497 | 22 | 481 | 0.0 | 540 |
| MS.gene71133.t1 | AT2G13100 | 61.538 | 234 | 83 | 1 | 271 | 497 | 96 | 329 | 4.56e-96 | 295 |
| MS.gene71133.t1 | AT2G13100 | 46.835 | 79 | 22 | 2 | 33 | 108 | 22 | 83 | 1.22e-11 | 66.6 |
| MS.gene71133.t1 | AT2G13100 | 65.566 | 212 | 73 | 0 | 286 | 497 | 84 | 295 | 1.05e-94 | 290 |
| MS.gene71133.t1 | AT2G13100 | 41.121 | 107 | 33 | 3 | 33 | 126 | 22 | 111 | 9.28e-13 | 69.7 |
Find 133 sgRNAs with CRISPR-Local
Find 192 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACTCTTTGGTGTAGGGTTT+TGG | 0.076474 | 4.1:+56540678 | MS.gene71133:CDS |
| CACATTTCATTGTTTGTAAA+TGG | 0.148209 | 4.1:+56541918 | MS.gene71133:CDS |
| TTTCTCGCAGTTTATGCTTT+TGG | 0.180816 | 4.1:+56540569 | MS.gene71133:CDS |
| CAATCATCTTCAACAAATTT+AGG | 0.225570 | 4.1:+56540428 | MS.gene71133:CDS |
| GCCATCCGTAGTTGCGGTTT+TGG | 0.230333 | 4.1:+56540772 | MS.gene71133:CDS |
| GAGGGTTGATCATGGGAATT+TGG | 0.243515 | 4.1:+56540819 | MS.gene71133:CDS |
| GCAATTGGACCTTTATTAAC+AGG | 0.259187 | 4.1:+56542101 | MS.gene71133:CDS |
| GTTACTGGTATGTTTGTAAA+TGG | 0.260992 | 4.1:+56541954 | MS.gene71133:CDS |
| GCTTCTGCTATGTTGGGATA+TGG | 0.271329 | 4.1:+56540884 | MS.gene71133:CDS |
| GATGGATGGGCTCCATTTAA+TGG | 0.275108 | 4.1:+56540506 | MS.gene71133:CDS |
| CGAGGGTTACAAAACTTTCT+TGG | 0.287508 | 4.1:+56540474 | MS.gene71133:CDS |
| ATGGGCTCAGCTTTAATTGC+AGG | 0.299296 | 4.1:+56542167 | MS.gene71133:CDS |
| AATAATGTCTTTCCTTGGTT+TGG | 0.303725 | 4.1:+56540937 | MS.gene71133:CDS |
| GTCCCGTCGGATCCATTAAA+TGG | 0.307310 | 4.1:-56540518 | None:intergenic |
| TTGCATATACATTTCTCTAT+TGG | 0.319747 | 4.1:+56541173 | MS.gene71133:CDS |
| GGAACATTGATGTTCGTTAC+TGG | 0.322965 | 4.1:+56541939 | MS.gene71133:CDS |
| ACTTCTGTTGGGAACATTGC+TGG | 0.324399 | 4.1:+56540851 | MS.gene71133:CDS |
| CATGAAACTTGCAGCTGTTA+TGG | 0.327755 | 4.1:-56541853 | None:intergenic |
| GTAGAGGCGTGGAGAATTCC+TGG | 0.330154 | 4.1:+56541109 | MS.gene71133:CDS |
| GCAATAAACTCATTGGAATA+AGG | 0.337279 | 4.1:+56540267 | MS.gene71133:CDS |
| TTTGATGTTGGAGGGGTGCT+TGG | 0.342063 | 4.1:+56541786 | MS.gene71133:CDS |
| CCTTGACTCTTCGATCTTTG+TGG | 0.342780 | 4.1:-56542225 | None:intergenic |
| AAATGTATATGCAACCAATT+TGG | 0.347879 | 4.1:-56541164 | None:intergenic |
| AGGTTCCTTGAGTATGTAAA+AGG | 0.349538 | 4.1:+56540287 | MS.gene71133:CDS |
| TCTTATAACAACTGCAGTTT+CGG | 0.357550 | 4.1:+56541986 | MS.gene71133:CDS |
| CATTATAATGCAGCTATTGA+TGG | 0.363128 | 4.1:+56541720 | MS.gene71133:intron |
| ATTGACGGAACAGGTTCTAT+TGG | 0.363481 | 4.1:+56542074 | MS.gene71133:CDS |
| AATGTCTTTCCTTGGTTTGG+TGG | 0.365931 | 4.1:+56540940 | MS.gene71133:CDS |
| TTGATTGCTTCTGCTATGTT+GGG | 0.370461 | 4.1:+56540878 | MS.gene71133:CDS |
| TCCGACGGGACATCCCTTCT+TGG | 0.372273 | 4.1:+56540530 | MS.gene71133:CDS |
| TTTGATTGCTTCTGCTATGT+TGG | 0.373005 | 4.1:+56540877 | MS.gene71133:CDS |
| GAGATATACCCTGTTAATAA+AGG | 0.377926 | 4.1:-56542110 | None:intergenic |
| GGTTCTATTGGAGCTGCAAT+TGG | 0.382305 | 4.1:+56542086 | MS.gene71133:CDS |
| GACATCCCTTCTTGGCCAAT+TGG | 0.383992 | 4.1:+56540538 | MS.gene71133:CDS |
| TGGAATGCTCATACTTCTGT+TGG | 0.395896 | 4.1:+56540839 | MS.gene71133:CDS |
| GCTTTCTCTTTCTCTTCAGC+AGG | 0.400979 | 4.1:-56541076 | None:intergenic |
| CTTGGAAACTTGGAGATGGA+TGG | 0.408177 | 4.1:+56540492 | MS.gene71133:CDS |
| AACTGCAGTTTCGGCTGACC+TGG | 0.415272 | 4.1:+56541995 | MS.gene71133:CDS |
| CTGTTCTTCTATCGAAGCTA+TGG | 0.419160 | 4.1:+56541894 | MS.gene71133:CDS |
| TCACTTCACTCTTTGGTGTA+GGG | 0.419338 | 4.1:+56540672 | MS.gene71133:CDS |
| TTCACTTCACTCTTTGGTGT+AGG | 0.428443 | 4.1:+56540671 | MS.gene71133:CDS |
| CAGGTGACACAGGCAATATT+AGG | 0.429106 | 4.1:-56540967 | None:intergenic |
| ACAAAACTTTCTTGGAAACT+TGG | 0.430917 | 4.1:+56540482 | MS.gene71133:CDS |
| TTACTGGTATGTTTGTAAAT+GGG | 0.437581 | 4.1:+56541955 | MS.gene71133:CDS |
| AGCAGTAGCAATAAACTCAT+TGG | 0.443217 | 4.1:+56540260 | MS.gene71133:CDS |
| AATCAGAACAATTGCTTGGT+GGG | 0.444126 | 4.1:-56540330 | None:intergenic |
| TGCTATGTTGGGATATGGAT+GGG | 0.444522 | 4.1:+56540889 | MS.gene71133:CDS |
| GCTGGTTTGTTTCAATCCAC+TGG | 0.445489 | 4.1:+56540746 | MS.gene71133:CDS |
| CAACATCCAATTGGCCAAGA+AGG | 0.446448 | 4.1:-56540544 | None:intergenic |
| CTTTCTTGGAAACTTGGAGA+TGG | 0.451971 | 4.1:+56540488 | MS.gene71133:CDS |
| GGATTAATAATGTCTTTCCT+TGG | 0.452103 | 4.1:+56540932 | MS.gene71133:CDS |
| CCTGTGTCACCTGAGTCTGC+TGG | 0.456840 | 4.1:+56540977 | MS.gene71133:CDS |
| TCAACTTTATTTGATGTTGG+AGG | 0.461360 | 4.1:+56541777 | MS.gene71133:CDS |
| GGAATGCTCATACTTCTGTT+GGG | 0.463788 | 4.1:+56540840 | MS.gene71133:CDS |
| CTGCTATGTTGGGATATGGA+TGG | 0.463955 | 4.1:+56540888 | MS.gene71133:CDS |
| TTAGTCGTTCAAATGATTGC+TGG | 0.469220 | 4.1:+56540728 | MS.gene71133:CDS |
| ACGGCTATTATTGACGGAAC+AGG | 0.470242 | 4.1:+56542065 | MS.gene71133:CDS |
| TTGAAGATGATTGAGGATCA+AGG | 0.472410 | 4.1:-56540418 | None:intergenic |
| CGAGAAAAGCAACATCCAAT+TGG | 0.474740 | 4.1:-56540553 | None:intergenic |
| CTGTCAACTTTATTTGATGT+TGG | 0.475619 | 4.1:+56541774 | MS.gene71133:CDS |
| CAACTTTATTTGATGTTGGA+GGG | 0.476843 | 4.1:+56541778 | MS.gene71133:CDS |
| TATACATCAAGTGAACATTC+CGG | 0.485524 | 4.1:-56542260 | None:intergenic |
| TTGGAAACTTGGAGATGGAT+GGG | 0.487759 | 4.1:+56540493 | MS.gene71133:CDS |
| GATGTTGGAGGGGTGCTTGG+AGG | 0.488799 | 4.1:+56541789 | MS.gene71133:CDS |
| ACTATTGGGATGGTAGGAAC+TGG | 0.489088 | 4.1:+56540644 | MS.gene71133:CDS |
| GCGGAAGAGAGGGTTGATCA+TGG | 0.491248 | 4.1:+56540811 | MS.gene71133:CDS |
| TAGAGGCGTGGAGAATTCCT+GGG | 0.500521 | 4.1:+56541110 | MS.gene71133:CDS |
| TCAATGACTTGTGTGTTCCC+AGG | 0.503220 | 4.1:-56542013 | None:intergenic |
| CACCTCTGACACCACAAGCT+TGG | 0.503458 | 4.1:-56542201 | None:intergenic |
| AAATTTGTTGAAGATGATTG+AGG | 0.509009 | 4.1:-56540425 | None:intergenic |
| ACGTCACAGAACCTCTCTTA+AGG | 0.510714 | 4.1:+56541044 | MS.gene71133:CDS |
| AACTTTATTTGATGTTGGAG+GGG | 0.514671 | 4.1:+56541779 | MS.gene71133:CDS |
| GAAGAGAAAGAGAAAGCAGT+TGG | 0.514991 | 4.1:+56541082 | MS.gene71133:CDS |
| TGGGTAATTGGTTTGGAAAG+CGG | 0.515022 | 4.1:+56540792 | MS.gene71133:CDS |
| GTTTGTTTCAATCCACTGGA+TGG | 0.515440 | 4.1:+56540750 | MS.gene71133:CDS |
| GCTATGTTGGGATATGGATG+GGG | 0.515923 | 4.1:+56540890 | MS.gene71133:CDS |
| TGGTTTGGAAAGCGGAAGAG+AGG | 0.517277 | 4.1:+56540800 | MS.gene71133:CDS |
| TGGGCTCAGCTTTAATTGCA+GGG | 0.517313 | 4.1:+56542168 | MS.gene71133:CDS |
| CACCAAGCTTGTGGTGTCAG+AGG | 0.519470 | 4.1:+56542199 | MS.gene71133:CDS |
| TTACAATCAGAACAATTGCT+TGG | 0.522048 | 4.1:-56540334 | None:intergenic |
| GGGTTCAGCAGCAGAAGAGA+GGG | 0.523196 | 4.1:+56540229 | MS.gene71133:CDS |
| CAATCAGAACAATTGCTTGG+TGG | 0.528716 | 4.1:-56540331 | None:intergenic |
| CTTCGATAGAAGAACAGAGC+AGG | 0.529870 | 4.1:-56541888 | None:intergenic |
| TTGGTGACAGGTGTAATTTG+AGG | 0.531026 | 4.1:+56540612 | MS.gene71133:CDS |
| GGGAACACACAAGTCATTGA+AGG | 0.531447 | 4.1:+56542016 | MS.gene71133:CDS |
| ATTACCCAAAACCGCAACTA+CGG | 0.534403 | 4.1:-56540777 | None:intergenic |
| TTTCTATCTAGTGAGACATC+GGG | 0.539968 | 4.1:+56541747 | MS.gene71133:CDS |
| AAAGCAAAAGGAGCAACCCC+AGG | 0.541673 | 4.1:-56541127 | None:intergenic |
| CCTGTGTGACTAACATAGAA+TGG | 0.543890 | 4.1:-56541199 | None:intergenic |
| CAATTGGACCTTTATTAACA+GGG | 0.545276 | 4.1:+56542102 | MS.gene71133:CDS |
| GCTGTTTCTCACCAAGCTTG+TGG | 0.546112 | 4.1:+56542190 | MS.gene71133:CDS |
| AACATCCAATTGGCCAAGAA+GGG | 0.548257 | 4.1:-56540543 | None:intergenic |
| AAGAGAAAGAGAAAGCAGTT+GGG | 0.549387 | 4.1:+56541083 | MS.gene71133:CDS |
| TCTTCAACTCCAGCAGACTC+AGG | 0.552716 | 4.1:-56540986 | None:intergenic |
| CCCAAAACCGCAACTACGGA+TGG | 0.554663 | 4.1:-56540773 | None:intergenic |
| ATTTCTTTCCTTCGAGTACG+AGG | 0.554699 | 4.1:+56540456 | MS.gene71133:CDS |
| CGGAAGAGAGGGTTGATCAT+GGG | 0.555149 | 4.1:+56540812 | MS.gene71133:CDS |
| GACACTCTTTACAATACTAG+TGG | 0.557798 | 4.1:-56540396 | None:intergenic |
| GGTTTGGAAAGCGGAAGAGA+GGG | 0.558678 | 4.1:+56540801 | MS.gene71133:CDS |
| GAAAGCAGTTGGGTTTGTAG+AGG | 0.561659 | 4.1:+56541093 | MS.gene71133:CDS |
| ACCGTCACGGCTATTATTGA+CGG | 0.562943 | 4.1:+56542059 | MS.gene71133:CDS |
| ATTTCTATCTAGTGAGACAT+CGG | 0.569869 | 4.1:+56541746 | MS.gene71133:CDS |
| GCAGTTGTTATAAGAGCATA+CGG | 0.573752 | 4.1:-56541978 | None:intergenic |
| TGTTGGGATATGGATGGGGA+TGG | 0.574458 | 4.1:+56540894 | MS.gene71133:CDS |
| TGGGTTCAGCAGCAGAAGAG+AGG | 0.576671 | 4.1:+56540228 | MS.gene71133:CDS |
| GTGCTTGGAGGAATTCTAGC+AGG | 0.577577 | 4.1:+56541801 | MS.gene71133:CDS |
| TTCGATAGAAGAACAGAGCA+GGG | 0.578788 | 4.1:-56541887 | None:intergenic |
| TGGATGGCCATCCGTAGTTG+CGG | 0.578813 | 4.1:+56540766 | MS.gene71133:CDS |
| CAGTTGGGTTTGTAGAGGCG+TGG | 0.579680 | 4.1:+56541098 | MS.gene71133:CDS |
| GTCAAGGTCTAATAGAGCGC+CGG | 0.579899 | 4.1:+56542241 | MS.gene71133:CDS |
| ACTGCAGTTTCGGCTGACCT+GGG | 0.591794 | 4.1:+56541996 | MS.gene71133:CDS |
| TGTTCTTCTATCGAAGCTAT+GGG | 0.594628 | 4.1:+56541895 | MS.gene71133:CDS |
| CAAGCTTGTGGTGTCAGAGG+TGG | 0.596291 | 4.1:+56542202 | MS.gene71133:CDS |
| CCATTCTATGTTAGTCACAC+AGG | 0.598577 | 4.1:+56541199 | MS.gene71133:CDS |
| GCTCCATTTAATGGATCCGA+CGG | 0.599897 | 4.1:+56540515 | MS.gene71133:CDS |
| AGGAAAGACATTATTAATCC+CGG | 0.600478 | 4.1:-56540929 | None:intergenic |
| GGAACACACAAGTCATTGAA+GGG | 0.601349 | 4.1:+56542017 | MS.gene71133:CDS |
| TTTGTAACCCTCGTACTCGA+AGG | 0.602664 | 4.1:-56540464 | None:intergenic |
| GGAGTCTCTTGCCTTAAGAG+AGG | 0.611576 | 4.1:-56541055 | None:intergenic |
| TATAGTTGTCCCAAGAAAAG+CGG | 0.612777 | 4.1:+56541016 | MS.gene71133:CDS |
| TTTCTTTCCTTCGAGTACGA+GGG | 0.617461 | 4.1:+56540457 | MS.gene71133:CDS |
| TCCGTCAATAATAGCCGTGA+CGG | 0.619578 | 4.1:-56542060 | None:intergenic |
| GCCAAGAAGGGATGTCCCGT+CGG | 0.622768 | 4.1:-56540531 | None:intergenic |
| CATTTAAGCGGTCAGAAATG+TGG | 0.623479 | 4.1:-56541824 | None:intergenic |
| CCAGCAGACTCAGGTGACAC+AGG | 0.623992 | 4.1:-56540977 | None:intergenic |
| TTATGGCTCTAGCATTTAAG+CGG | 0.628416 | 4.1:-56541836 | None:intergenic |
| CTCCATTTAATGGATCCGAC+GGG | 0.630611 | 4.1:+56540516 | MS.gene71133:CDS |
| CCACAAAGATCGAAGAGTCA+AGG | 0.633689 | 4.1:+56542225 | MS.gene71133:CDS |
| AACTACGGATGGCCATCCAG+TGG | 0.669126 | 4.1:-56540762 | None:intergenic |
| AGAGGCGTGGAGAATTCCTG+GGG | 0.675804 | 4.1:+56541111 | MS.gene71133:CDS |
| TTAGGAAAACCACCAAACCA+AGG | 0.683190 | 4.1:-56540949 | None:intergenic |
| GGTTCAGCAGCAGAAGAGAG+GGG | 0.687068 | 4.1:+56540230 | MS.gene71133:CDS |
| ACGAGCTCTAGCAACCGTCA+CGG | 0.738386 | 4.1:+56542046 | MS.gene71133:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AGATTTTAATAATGTAAATG+TGG | - | chr4.1:56541681-56541700 | None:intergenic | 15.0% |
| !! | TAAATGTGGAGTTATAATAA+GGG | - | chr4.1:56541667-56541686 | None:intergenic | 20.0% |
| !!! | TGAGGATTTTTTTAACTATT+GGG | + | chr4.1:56540630-56540649 | MS.gene71133:CDS | 20.0% |
| !!! | TTGAGGATTTTTTTAACTAT+TGG | + | chr4.1:56540629-56540648 | MS.gene71133:CDS | 20.0% |
| ! | AAAAACAGACAAAAAGCAAA+AGG | - | chr4.1:56541142-56541161 | None:intergenic | 25.0% |
| ! | AAATGTATATGCAACCAATT+TGG | - | chr4.1:56541167-56541186 | None:intergenic | 25.0% |
| ! | CAATCATCTTCAACAAATTT+AGG | + | chr4.1:56540428-56540447 | MS.gene71133:CDS | 25.0% |
| ! | CACATTTCATTGTTTGTAAA+TGG | + | chr4.1:56541918-56541937 | MS.gene71133:CDS | 25.0% |
| ! | GTAAATGTGGAGTTATAATA+AGG | - | chr4.1:56541668-56541687 | None:intergenic | 25.0% |
| ! | TTACTGGTATGTTTGTAAAT+GGG | + | chr4.1:56541955-56541974 | MS.gene71133:CDS | 25.0% |
| ! | TTGCATATACATTTCTCTAT+TGG | + | chr4.1:56541173-56541192 | MS.gene71133:CDS | 25.0% |
| !!! | AAATTTGTTGAAGATGATTG+AGG | - | chr4.1:56540428-56540447 | None:intergenic | 25.0% |
| !!! | GATTTTTTTAACTATTGGGA+TGG | + | chr4.1:56540634-56540653 | MS.gene71133:CDS | 25.0% |
| AATAATGTCTTTCCTTGGTT+TGG | + | chr4.1:56540937-56540956 | MS.gene71133:CDS | 30.0% | |
| ACAAAACTTTCTTGGAAACT+TGG | + | chr4.1:56540482-56540501 | MS.gene71133:CDS | 30.0% | |
| AGGAAAGACATTATTAATCC+CGG | - | chr4.1:56540932-56540951 | None:intergenic | 30.0% | |
| ATTTCACAAGTGTTAATGTC+AGG | + | chr4.1:56541591-56541610 | MS.gene71133:intron | 30.0% | |
| ATTTCTATCTAGTGAGACAT+CGG | + | chr4.1:56541746-56541765 | MS.gene71133:CDS | 30.0% | |
| CAAATAAGTCAATCCAAATC+AGG | + | chr4.1:56541641-56541660 | MS.gene71133:intron | 30.0% | |
| CAATTGGACCTTTATTAACA+GGG | + | chr4.1:56542102-56542121 | MS.gene71133:CDS | 30.0% | |
| CATTATAATGCAGCTATTGA+TGG | + | chr4.1:56541720-56541739 | MS.gene71133:intron | 30.0% | |
| GAGATATACCCTGTTAATAA+AGG | - | chr4.1:56542113-56542132 | None:intergenic | 30.0% | |
| GCAATAAACTCATTGGAATA+AGG | + | chr4.1:56540267-56540286 | MS.gene71133:CDS | 30.0% | |
| GGATTAATAATGTCTTTCCT+TGG | + | chr4.1:56540932-56540951 | MS.gene71133:CDS | 30.0% | |
| GTTACTGGTATGTTTGTAAA+TGG | + | chr4.1:56541954-56541973 | MS.gene71133:CDS | 30.0% | |
| TATACATCAAGTGAACATTC+CGG | - | chr4.1:56542263-56542282 | None:intergenic | 30.0% | |
| TCTTATAACAACTGCAGTTT+CGG | + | chr4.1:56541986-56542005 | MS.gene71133:CDS | 30.0% | |
| TTACAATCAGAACAATTGCT+TGG | - | chr4.1:56540337-56540356 | None:intergenic | 30.0% | |
| ! | AACTTTATTTGATGTTGGAG+GGG | + | chr4.1:56541779-56541798 | MS.gene71133:CDS | 30.0% |
| ! | AATACTAGTGGTTTTTCTAG+TGG | - | chr4.1:56540387-56540406 | None:intergenic | 30.0% |
| ! | ATGTACTTTTCTGGACATTT+TGG | + | chr4.1:56540593-56540612 | MS.gene71133:CDS | 30.0% |
| ! | CAACTTTATTTGATGTTGGA+GGG | + | chr4.1:56541778-56541797 | MS.gene71133:CDS | 30.0% |
| ! | CTGTCAACTTTATTTGATGT+TGG | + | chr4.1:56541774-56541793 | MS.gene71133:CDS | 30.0% |
| ! | TCAACTTTATTTGATGTTGG+AGG | + | chr4.1:56541777-56541796 | MS.gene71133:CDS | 30.0% |
| !! | TTTTTAACTATTGGGATGGT+AGG | + | chr4.1:56540638-56540657 | MS.gene71133:CDS | 30.0% |
| AAGAGAAAGAGAAAGCAGTT+GGG | + | chr4.1:56541083-56541102 | MS.gene71133:CDS | 35.0% | |
| AATCAGAACAATTGCTTGGT+GGG | - | chr4.1:56540333-56540352 | None:intergenic | 35.0% | |
| AGCAGTAGCAATAAACTCAT+TGG | + | chr4.1:56540260-56540279 | MS.gene71133:CDS | 35.0% | |
| AGGTTCCTTGAGTATGTAAA+AGG | + | chr4.1:56540287-56540306 | MS.gene71133:CDS | 35.0% | |
| CTAAATTAGCCCACCTAAAT+TGG | + | chr4.1:56541361-56541380 | MS.gene71133:intron | 35.0% | |
| GACACTCTTTACAATACTAG+TGG | - | chr4.1:56540399-56540418 | None:intergenic | 35.0% | |
| GCAATTGGACCTTTATTAAC+AGG | + | chr4.1:56542101-56542120 | MS.gene71133:CDS | 35.0% | |
| GCAGAAAAACTCATACTCTT+AGG | + | chr4.1:56541299-56541318 | MS.gene71133:intron | 35.0% | |
| GTTATAATAAGGGCCTGATT+TGG | - | chr4.1:56541657-56541676 | None:intergenic | 35.0% | |
| TATAGTTGTCCCAAGAAAAG+CGG | + | chr4.1:56541016-56541035 | MS.gene71133:CDS | 35.0% | |
| TGTTCTTCTATCGAAGCTAT+GGG | + | chr4.1:56541895-56541914 | MS.gene71133:CDS | 35.0% | |
| TTAGTCGTTCAAATGATTGC+TGG | + | chr4.1:56540728-56540747 | MS.gene71133:CDS | 35.0% | |
| TTGAAGATGATTGAGGATCA+AGG | - | chr4.1:56540421-56540440 | None:intergenic | 35.0% | |
| TTGATTGCTTCTGCTATGTT+GGG | + | chr4.1:56540878-56540897 | MS.gene71133:CDS | 35.0% | |
| TTTCTATCTAGTGAGACATC+GGG | + | chr4.1:56541747-56541766 | MS.gene71133:CDS | 35.0% | |
| TTTGATTGCTTCTGCTATGT+TGG | + | chr4.1:56540877-56540896 | MS.gene71133:CDS | 35.0% | |
| ! | GACTTCCTTTTACATACTCA+AGG | - | chr4.1:56540295-56540314 | None:intergenic | 35.0% |
| ! | GCAGTTGTTATAAGAGCATA+CGG | - | chr4.1:56541981-56542000 | None:intergenic | 35.0% |
| ! | GCAGTTTTCACAATGTTGAT+GGG | + | chr4.1:56542149-56542168 | MS.gene71133:CDS | 35.0% |
| ! | TGCAGTTTTCACAATGTTGA+TGG | + | chr4.1:56542148-56542167 | MS.gene71133:CDS | 35.0% |
| ! | TTCTCGCAGTTTATGCTTTT+GGG | + | chr4.1:56540570-56540589 | MS.gene71133:CDS | 35.0% |
| ! | TTTCTCGCAGTTTATGCTTT+TGG | + | chr4.1:56540569-56540588 | MS.gene71133:CDS | 35.0% |
| !! | TCATACTCTTAGGTCTTGTT+TGG | + | chr4.1:56541309-56541328 | MS.gene71133:intron | 35.0% |
| !! | TTATGGCTCTAGCATTTAAG+CGG | - | chr4.1:56541839-56541858 | None:intergenic | 35.0% |
| !! | TTGTCTGTTTTTCGCCAAAT+TGG | + | chr4.1:56541150-56541169 | MS.gene71133:CDS | 35.0% |
| AACATCCAATTGGCCAAGAA+GGG | - | chr4.1:56540546-56540565 | None:intergenic | 40.0% | |
| ATTACCCAAAACCGCAACTA+CGG | - | chr4.1:56540780-56540799 | None:intergenic | 40.0% | |
| ATTCTTCCTAGCGCCAATTT+AGG | - | chr4.1:56541377-56541396 | None:intergenic | 40.0% | |
| ATTGACGGAACAGGTTCTAT+TGG | + | chr4.1:56542074-56542093 | MS.gene71133:CDS | 40.0% | |
| ATTTCTTTCCTTCGAGTACG+AGG | + | chr4.1:56540456-56540475 | MS.gene71133:CDS | 40.0% | |
| CAATCAGAACAATTGCTTGG+TGG | - | chr4.1:56540334-56540353 | None:intergenic | 40.0% | |
| CATGAAACTTGCAGCTGTTA+TGG | - | chr4.1:56541856-56541875 | None:intergenic | 40.0% | |
| CATTTAAGCGGTCAGAAATG+TGG | - | chr4.1:56541827-56541846 | None:intergenic | 40.0% | |
| CCATTCTATGTTAGTCACAC+AGG | + | chr4.1:56541199-56541218 | MS.gene71133:CDS | 40.0% | |
| CCTGTGTGACTAACATAGAA+TGG | - | chr4.1:56541202-56541221 | None:intergenic | 40.0% | |
| CGAGAAAAGCAACATCCAAT+TGG | - | chr4.1:56540556-56540575 | None:intergenic | 40.0% | |
| CGAGGGTTACAAAACTTTCT+TGG | + | chr4.1:56540474-56540493 | MS.gene71133:CDS | 40.0% | |
| CTGTTCTTCTATCGAAGCTA+TGG | + | chr4.1:56541894-56541913 | MS.gene71133:CDS | 40.0% | |
| CTTTCTTGGAAACTTGGAGA+TGG | + | chr4.1:56540488-56540507 | MS.gene71133:CDS | 40.0% | |
| GAAGAGAAAGAGAAAGCAGT+TGG | + | chr4.1:56541082-56541101 | MS.gene71133:CDS | 40.0% | |
| GGAACACACAAGTCATTGAA+GGG | + | chr4.1:56542017-56542036 | MS.gene71133:CDS | 40.0% | |
| GGAACATTGATGTTCGTTAC+TGG | + | chr4.1:56541939-56541958 | MS.gene71133:CDS | 40.0% | |
| GGAATGCTCATACTTCTGTT+GGG | + | chr4.1:56540840-56540859 | MS.gene71133:CDS | 40.0% | |
| GGTATATCTCTGCAAAAAGC+TGG | + | chr4.1:56542123-56542142 | MS.gene71133:CDS | 40.0% | |
| GTTTGTTTCAATCCACTGGA+TGG | + | chr4.1:56540750-56540769 | MS.gene71133:CDS | 40.0% | |
| TGCTATGTTGGGATATGGAT+GGG | + | chr4.1:56540889-56540908 | MS.gene71133:CDS | 40.0% | |
| TGGAATGCTCATACTTCTGT+TGG | + | chr4.1:56540839-56540858 | MS.gene71133:CDS | 40.0% | |
| TTAGGAAAACCACCAAACCA+AGG | - | chr4.1:56540952-56540971 | None:intergenic | 40.0% | |
| TTCGATAGAAGAACAGAGCA+GGG | - | chr4.1:56541890-56541909 | None:intergenic | 40.0% | |
| TTGGAAACTTGGAGATGGAT+GGG | + | chr4.1:56540493-56540512 | MS.gene71133:CDS | 40.0% | |
| TTTCTTTCCTTCGAGTACGA+GGG | + | chr4.1:56540457-56540476 | MS.gene71133:CDS | 40.0% | |
| ! | AGCTTTTTATCCAACCCACT+TGG | - | chr4.1:56541462-56541481 | None:intergenic | 40.0% |
| ! | GCTTTTTATCCAACCCACTT+GGG | - | chr4.1:56541461-56541480 | None:intergenic | 40.0% |
| ! | GGTGTTTTCACTTCACTCTT+TGG | + | chr4.1:56540665-56540684 | MS.gene71133:CDS | 40.0% |
| ! | TCACTTCACTCTTTGGTGTA+GGG | + | chr4.1:56540672-56540691 | MS.gene71133:CDS | 40.0% |
| ! | TTCACTTCACTCTTTGGTGT+AGG | + | chr4.1:56540671-56540690 | MS.gene71133:CDS | 40.0% |
| ! | TTGGTGACAGGTGTAATTTG+AGG | + | chr4.1:56540612-56540631 | MS.gene71133:CDS | 40.0% |
| !! | AATGTCTTTCCTTGGTTTGG+TGG | + | chr4.1:56540940-56540959 | MS.gene71133:CDS | 40.0% |
| !! | ACTCTTTGGTGTAGGGTTTT+GGG | + | chr4.1:56540679-56540698 | MS.gene71133:CDS | 40.0% |
| !! | TGGGTAATTGGTTTGGAAAG+CGG | + | chr4.1:56540792-56540811 | MS.gene71133:CDS | 40.0% |
| !! | TTTCTGGACATTTTGGTGAC+AGG | + | chr4.1:56540600-56540619 | MS.gene71133:CDS | 40.0% |
| !!! | AATTGCTTGGTGGGTTTTGT+GGG | - | chr4.1:56540324-56540343 | None:intergenic | 40.0% |
| !!! | GCTTTTGGGATGTACTTTTC+TGG | + | chr4.1:56540584-56540603 | MS.gene71133:CDS | 40.0% |
| !!! | TAGTTGCGGTTTTGGGTAAT+TGG | + | chr4.1:56540780-56540799 | MS.gene71133:CDS | 40.0% |
| ACCGTCACGGCTATTATTGA+CGG | + | chr4.1:56542059-56542078 | MS.gene71133:CDS | 45.0% | |
| ACGGCTATTATTGACGGAAC+AGG | + | chr4.1:56542065-56542084 | MS.gene71133:CDS | 45.0% | |
| ACGTCACAGAACCTCTCTTA+AGG | + | chr4.1:56541044-56541063 | MS.gene71133:CDS | 45.0% | |
| ACTATTGGGATGGTAGGAAC+TGG | + | chr4.1:56540644-56540663 | MS.gene71133:CDS | 45.0% | |
| ACTTCTGTTGGGAACATTGC+TGG | + | chr4.1:56540851-56540870 | MS.gene71133:CDS | 45.0% | |
| CAACATCCAATTGGCCAAGA+AGG | - | chr4.1:56540547-56540566 | None:intergenic | 45.0% | |
| CAGGTGACACAGGCAATATT+AGG | - | chr4.1:56540970-56540989 | None:intergenic | 45.0% | |
| CCACAAAGATCGAAGAGTCA+AGG | + | chr4.1:56542225-56542244 | MS.gene71133:CDS | 45.0% | |
| CCTTGACTCTTCGATCTTTG+TGG | - | chr4.1:56542228-56542247 | None:intergenic | 45.0% | |
| CTGCTATGTTGGGATATGGA+TGG | + | chr4.1:56540888-56540907 | MS.gene71133:CDS | 45.0% | |
| CTTCGATAGAAGAACAGAGC+AGG | - | chr4.1:56541891-56541910 | None:intergenic | 45.0% | |
| CTTGGAAACTTGGAGATGGA+TGG | + | chr4.1:56540492-56540511 | MS.gene71133:CDS | 45.0% | |
| GAAAGCAGTTGGGTTTGTAG+AGG | + | chr4.1:56541093-56541112 | MS.gene71133:CDS | 45.0% | |
| GCTATGTTGGGATATGGATG+GGG | + | chr4.1:56540890-56540909 | MS.gene71133:CDS | 45.0% | |
| GCTTCTGCTATGTTGGGATA+TGG | + | chr4.1:56540884-56540903 | MS.gene71133:CDS | 45.0% | |
| GCTTTCTCTTTCTCTTCAGC+AGG | - | chr4.1:56541079-56541098 | None:intergenic | 45.0% | |
| GGGAACACACAAGTCATTGA+AGG | + | chr4.1:56542016-56542035 | MS.gene71133:CDS | 45.0% | |
| GGTTCTATTGGAGCTGCAAT+TGG | + | chr4.1:56542086-56542105 | MS.gene71133:CDS | 45.0% | |
| TCCGTCAATAATAGCCGTGA+CGG | - | chr4.1:56542063-56542082 | None:intergenic | 45.0% | |
| TTCCTAGCGCCAATTTAGGT+GGG | - | chr4.1:56541373-56541392 | None:intergenic | 45.0% | |
| TTTATCCAACCCACTTGGGT+TGG | - | chr4.1:56541457-56541476 | None:intergenic | 45.0% | |
| TTTGTAACCCTCGTACTCGA+AGG | - | chr4.1:56540467-56540486 | None:intergenic | 45.0% | |
| ! | ATGGGCTCAGCTTTAATTGC+AGG | + | chr4.1:56542167-56542186 | MS.gene71133:CDS | 45.0% |
| ! | CTCCATTTAATGGATCCGAC+GGG | + | chr4.1:56540516-56540535 | MS.gene71133:CDS | 45.0% |
| ! | GAGGGTTGATCATGGGAATT+TGG | + | chr4.1:56540819-56540838 | MS.gene71133:CDS | 45.0% |
| ! | GATGGATGGGCTCCATTTAA+TGG | + | chr4.1:56540506-56540525 | MS.gene71133:CDS | 45.0% |
| ! | GCTCCATTTAATGGATCCGA+CGG | + | chr4.1:56540515-56540534 | MS.gene71133:CDS | 45.0% |
| ! | TCAATGACTTGTGTGTTCCC+AGG | - | chr4.1:56542016-56542035 | None:intergenic | 45.0% |
| ! | TGGGCTCAGCTTTAATTGCA+GGG | + | chr4.1:56542168-56542187 | MS.gene71133:CDS | 45.0% |
| !! | ACGTCATCTCCGCTTTTCTT+GGG | - | chr4.1:56541028-56541047 | None:intergenic | 45.0% |
| !! | CACTCTTTGGTGTAGGGTTT+TGG | + | chr4.1:56540678-56540697 | MS.gene71133:CDS | 45.0% |
| !! | CTCTTTGGTGTAGGGTTTTG+GGG | + | chr4.1:56540680-56540699 | MS.gene71133:CDS | 45.0% |
| !! | GCTGGTTTGTTTCAATCCAC+TGG | + | chr4.1:56540746-56540765 | MS.gene71133:CDS | 45.0% |
| !!! | CAATTGCTTGGTGGGTTTTG+TGG | - | chr4.1:56540325-56540344 | None:intergenic | 45.0% |
| !!! | GCGGTTTTGGGTAATTGGTT+TGG | + | chr4.1:56540785-56540804 | MS.gene71133:CDS | 45.0% |
| AAAGCAAAAGGAGCAACCCC+AGG | - | chr4.1:56541130-56541149 | None:intergenic | 50.0% | |
| CTTCCTAGCGCCAATTTAGG+TGG | - | chr4.1:56541374-56541393 | None:intergenic | 50.0% | |
| GACATCCCTTCTTGGCCAAT+TGG | + | chr4.1:56540538-56540557 | MS.gene71133:CDS | 50.0% | |
| GGAGTCTCTTGCCTTAAGAG+AGG | - | chr4.1:56541058-56541077 | None:intergenic | 50.0% | |
| GGTTTGGAAAGCGGAAGAGA+GGG | + | chr4.1:56540801-56540820 | MS.gene71133:CDS | 50.0% | |
| GTCAAGGTCTAATAGAGCGC+CGG | + | chr4.1:56542241-56542260 | MS.gene71133:CDS | 50.0% | |
| GTCCCGTCGGATCCATTAAA+TGG | - | chr4.1:56540521-56540540 | None:intergenic | 50.0% | |
| GTGCTTGGAGGAATTCTAGC+AGG | + | chr4.1:56541801-56541820 | MS.gene71133:CDS | 50.0% | |
| TCTTCAACTCCAGCAGACTC+AGG | - | chr4.1:56540989-56541008 | None:intergenic | 50.0% | |
| TGTTGGGATATGGATGGGGA+TGG | + | chr4.1:56540894-56540913 | MS.gene71133:CDS | 50.0% | |
| ! | CCATCCGTAGTTGCGGTTTT+GGG | + | chr4.1:56540773-56540792 | MS.gene71133:CDS | 50.0% |
| ! | CGGAAGAGAGGGTTGATCAT+GGG | + | chr4.1:56540812-56540831 | MS.gene71133:CDS | 50.0% |
| ! | TAGAGGCGTGGAGAATTCCT+GGG | + | chr4.1:56541110-56541129 | MS.gene71133:CDS | 50.0% |
| ! | TGGTTTGGAAAGCGGAAGAG+AGG | + | chr4.1:56540800-56540819 | MS.gene71133:CDS | 50.0% |
| !! | GACGTCATCTCCGCTTTTCT+TGG | - | chr4.1:56541029-56541048 | None:intergenic | 50.0% |
| !! | GCTGTTTCTCACCAAGCTTG+TGG | + | chr4.1:56542190-56542209 | MS.gene71133:CDS | 50.0% |
| !! | GGATGGTCTTTTGTTGTGCC+GGG | + | chr4.1:56540911-56540930 | MS.gene71133:CDS | 50.0% |
| !! | GGGATGGTCTTTTGTTGTGC+CGG | + | chr4.1:56540910-56540929 | MS.gene71133:CDS | 50.0% |
| !! | GTGGTATTGACTTGGGACCT+GGG | - | chr4.1:56541430-56541449 | None:intergenic | 50.0% |
| !! | TGGCCTGGTGGTATTGACTT+GGG | - | chr4.1:56541437-56541456 | None:intergenic | 50.0% |
| !! | TTGGCCTGGTGGTATTGACT+TGG | - | chr4.1:56541438-56541457 | None:intergenic | 50.0% |
| !! | TTTGATGTTGGAGGGGTGCT+TGG | + | chr4.1:56541786-56541805 | MS.gene71133:CDS | 50.0% |
| !!! | TGGTGGGTTTTGTGGGAAAC+AGG | - | chr4.1:56540317-56540336 | None:intergenic | 50.0% |
| AACTACGGATGGCCATCCAG+TGG | - | chr4.1:56540765-56540784 | None:intergenic | 55.0% | |
| AACTGCAGTTTCGGCTGACC+TGG | + | chr4.1:56541995-56542014 | MS.gene71133:CDS | 55.0% | |
| ACTGCAGTTTCGGCTGACCT+GGG | + | chr4.1:56541996-56542015 | MS.gene71133:CDS | 55.0% | |
| AGCCCACCTAAATTGGCGCT+AGG | + | chr4.1:56541368-56541387 | MS.gene71133:intron | 55.0% | |
| CACCTCTGACACCACAAGCT+TGG | - | chr4.1:56542204-56542223 | None:intergenic | 55.0% | |
| CAGTTGGGTTTGTAGAGGCG+TGG | + | chr4.1:56541098-56541117 | MS.gene71133:CDS | 55.0% | |
| CCCAAAACCGCAACTACGGA+TGG | - | chr4.1:56540776-56540795 | None:intergenic | 55.0% | |
| GAATCGAACCTGAGACCTCG+AGG | + | chr4.1:56541393-56541412 | MS.gene71133:intron | 55.0% | |
| GGGTTCAGCAGCAGAAGAGA+GGG | + | chr4.1:56540229-56540248 | MS.gene71133:CDS | 55.0% | |
| GGTCCCAAGTCAATACCACC+AGG | + | chr4.1:56541431-56541450 | MS.gene71133:intron | 55.0% | |
| GGTTCAGCAGCAGAAGAGAG+GGG | + | chr4.1:56540230-56540249 | MS.gene71133:CDS | 55.0% | |
| TGGATGGCCATCCGTAGTTG+CGG | + | chr4.1:56540766-56540785 | MS.gene71133:CDS | 55.0% | |
| TGGGTTCAGCAGCAGAAGAG+AGG | + | chr4.1:56540228-56540247 | MS.gene71133:CDS | 55.0% | |
| ! | ACGAGCTCTAGCAACCGTCA+CGG | + | chr4.1:56542046-56542065 | MS.gene71133:CDS | 55.0% |
| ! | AGAGGCGTGGAGAATTCCTG+GGG | + | chr4.1:56541111-56541130 | MS.gene71133:CDS | 55.0% |
| ! | CAAGCTTGTGGTGTCAGAGG+TGG | + | chr4.1:56542202-56542221 | MS.gene71133:CDS | 55.0% |
| ! | CACCAAGCTTGTGGTGTCAG+AGG | + | chr4.1:56542199-56542218 | MS.gene71133:CDS | 55.0% |
| ! | GCCATCCGTAGTTGCGGTTT+TGG | + | chr4.1:56540772-56540791 | MS.gene71133:CDS | 55.0% |
| ! | GCGGAAGAGAGGGTTGATCA+TGG | + | chr4.1:56540811-56540830 | MS.gene71133:CDS | 55.0% |
| ! | GTAGAGGCGTGGAGAATTCC+TGG | + | chr4.1:56541109-56541128 | MS.gene71133:CDS | 55.0% |
| !! | GGTGGTATTGACTTGGGACC+TGG | - | chr4.1:56541431-56541450 | None:intergenic | 55.0% |
| ACCACCAGGCCAACCCAAGT+GGG | + | chr4.1:56541445-56541464 | MS.gene71133:intron | 60.0% | |
| CCAGCAGACTCAGGTGACAC+AGG | - | chr4.1:56540980-56540999 | None:intergenic | 60.0% | |
| CCTGTGTCACCTGAGTCTGC+TGG | + | chr4.1:56540977-56540996 | MS.gene71133:CDS | 60.0% | |
| GCCAAGAAGGGATGTCCCGT+CGG | - | chr4.1:56540534-56540553 | None:intergenic | 60.0% | |
| TACCACCAGGCCAACCCAAG+TGG | + | chr4.1:56541444-56541463 | MS.gene71133:intron | 60.0% | |
| TCCGACGGGACATCCCTTCT+TGG | + | chr4.1:56540530-56540549 | MS.gene71133:CDS | 60.0% | |
| TCGAACCTGAGACCTCGAGG+AGG | + | chr4.1:56541396-56541415 | MS.gene71133:intron | 60.0% | |
| !! | GATGTTGGAGGGGTGCTTGG+AGG | + | chr4.1:56541789-56541808 | MS.gene71133:CDS | 60.0% |
| CCAGGCCAACCCAAGTGGGT+TGG | + | chr4.1:56541449-56541468 | MS.gene71133:intron | 65.0% | |
| GTGCTCCTCCTCGAGGTCTC+AGG | - | chr4.1:56541404-56541423 | None:intergenic | 65.0% | |
| ! | TCGAGGAGGAGCACACTCCC+AGG | + | chr4.1:56541410-56541429 | MS.gene71133:intron | 65.0% |
| ! | TGGGAGTGTGCTCCTCCTCG+AGG | - | chr4.1:56541411-56541430 | None:intergenic | 65.0% |
| !! | ACCCACTTGGGTTGGCCTGG+TGG | - | chr4.1:56541449-56541468 | None:intergenic | 65.0% |
| !! | CCAACCCACTTGGGTTGGCC+TGG | - | chr4.1:56541452-56541471 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 56540227 | 56542283 | 56540227 | ID=MS.gene71133 |
| chr4.1 | mRNA | 56540227 | 56542283 | 56540227 | ID=MS.gene71133.t1;Parent=MS.gene71133 |
| chr4.1 | exon | 56540227 | 56541220 | 56540227 | ID=MS.gene71133.t1.exon1;Parent=MS.gene71133.t1 |
| chr4.1 | CDS | 56540227 | 56541220 | 56540227 | ID=cds.MS.gene71133.t1;Parent=MS.gene71133.t1 |
| chr4.1 | exon | 56541733 | 56542283 | 56541733 | ID=MS.gene71133.t1.exon2;Parent=MS.gene71133.t1 |
| chr4.1 | CDS | 56541733 | 56542283 | 56541733 | ID=cds.MS.gene71133.t1;Parent=MS.gene71133.t1 |
| Gene Sequence |
| Protein sequence |
