Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71187.t1 | XP_003628802.1 | 62.7 | 59 | 16 | 1 | 1 | 59 | 1 | 53 | 8.10E-07 | 64.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71187.t1 | G7LHP4 | 62.7 | 59 | 16 | 1 | 1 | 59 | 1 | 53 | 5.9e-07 | 64.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052187 | MS.gene71187 | 0.814209 | 1.73E-51 | -1.69E-46 |
| MS.gene053074 | MS.gene71187 | 0.850066 | 2.16E-60 | -1.69E-46 |
| MS.gene055359 | MS.gene71187 | 0.823027 | 1.73E-53 | -1.69E-46 |
| MS.gene058168 | MS.gene71187 | 0.827661 | 1.38E-54 | -1.69E-46 |
| MS.gene059006 | MS.gene71187 | 0.834967 | 2.21E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71187.t1 | MTR_8g066920 | 43.750 | 160 | 65 | 5 | 1 | 156 | 1 | 139 | 2.72e-12 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 95 sgRNAs with CRISPR-Local
Find 84 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCCAGTTCCTAATGAAAA+AGG | 0.223244 | 8.3:-36065684 | MS.gene71187:CDS |
| CGACAGCCTGAAGGATTTCC+TGG | 0.259925 | 8.3:-36065342 | MS.gene71187:CDS |
| GTAGGATCTGGTGGATTTCC+TGG | 0.299465 | 8.3:-36065597 | MS.gene71187:CDS |
| CAACAGCCTGGAGGATTTCC+TGG | 0.300756 | 8.3:-36065441 | MS.gene71187:CDS |
| AATCCTTCAGGTAGTCCTTT+AGG | 0.308295 | 8.3:+36065267 | None:intergenic |
| GGACTGCCTGGAGGATTTCC+TGG | 0.316635 | 8.3:-36065321 | MS.gene71187:CDS |
| GGACTGCCTGGAGGATTTCC+TGG | 0.316635 | 8.3:-36065576 | MS.gene71187:CDS |
| CATTGCTCTCTTTGTGCTGT+TGG | 0.329983 | 8.3:-36065796 | MS.gene71187:CDS |
| AACTGGAAGGCTCCCACCTT+CGG | 0.348143 | 8.3:+36065698 | None:intergenic |
| GTAGGATCTGGAGGATTTCC+TGG | 0.353215 | 8.3:-36065417 | MS.gene71187:CDS |
| GGACTGCCTGGAGGATTTCC+TGG | 0.369954 | 8.3:-36065495 | MS.gene71187:CDS |
| ACTGGAAGGCTCCCACCTTC+GGG | 0.371322 | 8.3:+36065699 | None:intergenic |
| ATTGCTCTCTTTGTGCTGTT+GGG | 0.382762 | 8.3:-36065795 | MS.gene71187:CDS |
| AAACTGTCTGGTATAGTATC+TGG | 0.388710 | 8.3:-36065198 | MS.gene71187:CDS |
| GGACTACCTGAAGGATTTCC+TGG | 0.390640 | 8.3:-36065261 | MS.gene71187:CDS |
| TGGTGTAGGATCTAGAGGTT+TGG | 0.391368 | 8.3:-36065241 | MS.gene71187:CDS |
| GTAGGATCTAGTGGATTTCC+TGG | 0.392486 | 8.3:-36065552 | MS.gene71187:CDS |
| GGATTTCCTGGTGTAGGATC+TGG | 0.393975 | 8.3:-36065309 | MS.gene71187:CDS |
| GGATTTCCTGGTGTAGGATC+TGG | 0.393975 | 8.3:-36065429 | MS.gene71187:CDS |
| GGTGGATTTCCTGGACTGCC+TGG | 0.395309 | 8.3:-36065588 | MS.gene71187:CDS |
| GGTTTATAGCCGTCTTGATC+AGG | 0.395475 | 8.3:+36065720 | None:intergenic |
| GAAGGATTTCCTGGACTGCC+TGG | 0.404463 | 8.3:-36065333 | MS.gene71187:CDS |
| AGACTGCCTAGAGGATTTCC+TGG | 0.421682 | 8.3:-36065621 | MS.gene71187:CDS |
| GGCAGTCCAGGAAATCCTTC+AGG | 0.429276 | 8.3:+36065336 | None:intergenic |
| AGTGGATTTCCTGGACTGCC+TGG | 0.429692 | 8.3:-36065543 | MS.gene71187:CDS |
| GGTGTAGGATCTAGAGGTTT+GGG | 0.437013 | 8.3:-36065240 | MS.gene71187:CDS |
| TTGGGAGATGAAAAGATACT+TGG | 0.441136 | 8.3:-36065222 | MS.gene71187:CDS |
| GGATTTCCTGGTGTAGGATC+TGG | 0.442338 | 8.3:-36065609 | MS.gene71187:CDS |
| GGAGGATTTCCTGGACTACC+TGG | 0.443457 | 8.3:-36065408 | MS.gene71187:CDS |
| CCTACACCAGGAAATCCTTC+AGG | 0.459539 | 8.3:+36065255 | None:intergenic |
| AAGATACTTGGAAAACTGTC+TGG | 0.461384 | 8.3:-36065210 | MS.gene71187:CDS |
| CTGGAGGATTTCCTAGTGTA+GGG | 0.489822 | 8.3:-36065524 | MS.gene71187:CDS |
| CTTCACCTGGTTGGTACACC+AGG | 0.491546 | 8.3:+36065168 | None:intergenic |
| GTAGGGTCTAGAGGACTGCC+TGG | 0.495231 | 8.3:-36065507 | MS.gene71187:CDS |
| CCAGGCTGTTGAAATCCTCC+AGG | 0.506982 | 8.3:+36065453 | None:intergenic |
| CCTGGAGGATTTCAACAGCC+TGG | 0.528326 | 8.3:-36065453 | MS.gene71187:CDS |
| TTTCCTGGTGTAGGATCTAG+AGG | 0.531302 | 8.3:-36065246 | MS.gene71187:CDS |
| TCAGGCTGTCGAAATCCTCC+AGG | 0.531513 | 8.3:+36065354 | None:intergenic |
| TGTCCTCTAGATCCTACATC+AGG | 0.534868 | 8.3:+36065378 | None:intergenic |
| GGAAATCCTCCAGGCAGTCC+AGG | 0.537055 | 8.3:+36065324 | None:intergenic |
| GGAAATCCTCCAGGCAGTCC+AGG | 0.537055 | 8.3:+36065579 | None:intergenic |
| TTTCCTGGTGTAGGATCTAG+TGG | 0.538813 | 8.3:-36065561 | MS.gene71187:CDS |
| CCTGGAGGATTTCCTAGTGT+AGG | 0.538910 | 8.3:-36065525 | MS.gene71187:CDS |
| GGAAATCCTCCAGGTAGTCC+AGG | 0.538987 | 8.3:+36065399 | None:intergenic |
| GGAAATCCTCCAGGCAGTCC+AGG | 0.545859 | 8.3:+36065534 | None:intergenic |
| TTTCCTGGTGTAGGATCTGG+TGG | 0.550376 | 8.3:-36065606 | MS.gene71187:CDS |
| GTAGGATCTAGAGGACAGCC+TGG | 0.555583 | 8.3:-36065372 | MS.gene71187:CDS |
| TACTGCCTGGTGTACCAACC+AGG | 0.555639 | 8.3:-36065173 | MS.gene71187:CDS |
| GGAAATCCTCTAGGCAGTCT+AGG | 0.557439 | 8.3:+36065624 | None:intergenic |
| ATAGTATCTGGAGTACTGCC+TGG | 0.560914 | 8.3:-36065186 | MS.gene71187:CDS |
| GTAGGATCTAGAGGACAGCC+TGG | 0.567286 | 8.3:-36065471 | MS.gene71187:CDS |
| CCTGGAGGATTTCCTGGTGT+AGG | 0.569135 | 8.3:-36065315 | MS.gene71187:CDS |
| CCTGGAGGATTTCCTGGTGT+AGG | 0.569135 | 8.3:-36065489 | MS.gene71187:CDS |
| CCTGGAGGATTTCCTGGTGT+AGG | 0.569135 | 8.3:-36065570 | MS.gene71187:CDS |
| TCACCCAAACCTCCTTCACC+TGG | 0.574916 | 8.3:+36065155 | None:intergenic |
| TTTCCTGATGTAGGATCTAG+AGG | 0.576832 | 8.3:-36065381 | MS.gene71187:CDS |
| GGAGGATTTCGACAGCCTGA+AGG | 0.577479 | 8.3:-36065351 | MS.gene71187:CDS |
| TTTCCTAGTGTAGGGTCTAG+AGG | 0.583221 | 8.3:-36065516 | MS.gene71187:CDS |
| CCTACACCAGGAAATCCTCT+AGG | 0.586303 | 8.3:+36065615 | None:intergenic |
| CCTACACCAGGAAATCCTCC+AGG | 0.591190 | 8.3:+36065435 | None:intergenic |
| TTTCCTGGTGTAGGATCTAG+AGG | 0.592608 | 8.3:-36065480 | MS.gene71187:CDS |
| GACGGCTATAAACCCGAAGG+TGG | 0.593621 | 8.3:-36065711 | MS.gene71187:CDS |
| CCTACATCAGGAAATCCTCC+AGG | 0.594335 | 8.3:+36065390 | None:intergenic |
| CCTGGAGGATTTCCTGATGT+AGG | 0.594745 | 8.3:-36065390 | MS.gene71187:CDS |
| TTTCCTGGTGTAGGATCTGG+AGG | 0.596162 | 8.3:-36065306 | MS.gene71187:CDS |
| TTTCCTGGTGTAGGATCTGG+AGG | 0.596162 | 8.3:-36065426 | MS.gene71187:CDS |
| CCAAACCTCCTTCACCTGGT+TGG | 0.598208 | 8.3:+36065159 | None:intergenic |
| AATCCTCCAGATCCTACACC+AGG | 0.600292 | 8.3:+36065423 | None:intergenic |
| CCTACACCAGGAAATCCTCC+AGG | 0.605765 | 8.3:+36065315 | None:intergenic |
| CCTACACCAGGAAATCCTCC+AGG | 0.605765 | 8.3:+36065489 | None:intergenic |
| CCTACACCAGGAAATCCTCC+AGG | 0.605765 | 8.3:+36065570 | None:intergenic |
| GGATTTCCTGGACTGCCTGG+AGG | 0.608890 | 8.3:-36065540 | MS.gene71187:CDS |
| CCTAGAGGATTTCCTGGTGT+AGG | 0.610793 | 8.3:-36065615 | MS.gene71187:CDS |
| CTGGTGTACCAACCAGGTGA+AGG | 0.612247 | 8.3:-36065167 | None:intergenic |
| AATCCTCCAGATCCTACACC+AGG | 0.612832 | 8.3:+36065303 | None:intergenic |
| CCTGGAGGATTTCCTGGTGT+AGG | 0.612965 | 8.3:-36065435 | MS.gene71187:CDS |
| GGATTTCCTGGACTGCCTGG+AGG | 0.614082 | 8.3:-36065585 | MS.gene71187:CDS |
| TGTCCTCTAGATCCTACACC+AGG | 0.624714 | 8.3:+36065477 | None:intergenic |
| AATCCACCAGATCCTACACC+AGG | 0.625031 | 8.3:+36065603 | None:intergenic |
| CCTGAAGGATTTCCTGGTGT+AGG | 0.627039 | 8.3:-36065255 | MS.gene71187:CDS |
| CTTCCTAAAGGACTACCTGA+AGG | 0.635827 | 8.3:-36065270 | MS.gene71187:CDS |
| GGATTTCCTGGACTGCCTGG+AGG | 0.637581 | 8.3:-36065330 | MS.gene71187:CDS |
| AAACCTCTAGATCCTACACC+AGG | 0.638088 | 8.3:+36065243 | None:intergenic |
| AATCCACTAGATCCTACACC+AGG | 0.638733 | 8.3:+36065558 | None:intergenic |
| GATTCTGATCCTGATCAAGA+CGG | 0.650207 | 8.3:-36065729 | MS.gene71187:CDS |
| GGAGGATTTCAACAGCCTGG+AGG | 0.668853 | 8.3:-36065450 | MS.gene71187:CDS |
| CCTACACTAGGAAATCCTCC+AGG | 0.669583 | 8.3:+36065525 | None:intergenic |
| AGTCCTCTAGACCCTACACT+AGG | 0.670297 | 8.3:+36065513 | None:intergenic |
| GGATTTCCTGGACTACCTGG+AGG | 0.671330 | 8.3:-36065405 | MS.gene71187:CDS |
| ACGGCTATAAACCCGAAGGT+GGG | 0.675663 | 8.3:-36065710 | MS.gene71187:CDS |
| GGGTCTAGAGGACTGCCTGG+AGG | 0.693753 | 8.3:-36065504 | MS.gene71187:CDS |
| CAAGACGGCTATAAACCCGA+AGG | 0.711519 | 8.3:-36065714 | MS.gene71187:CDS |
| GGATCTAGAGGACAGCCTGG+AGG | 0.718203 | 8.3:-36065369 | MS.gene71187:CDS |
| GGATCTAGAGGACAGCCTGG+AGG | 0.718203 | 8.3:-36065468 | MS.gene71187:CDS |
| GGATTTCCTAGACTGCCTAG+AGG | 0.729360 | 8.3:-36065630 | MS.gene71187:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| GTTCCTAATGAAAAAGGATT+TGG | - | chr8.3:36065311-36065330 | MS.gene71187:CDS | 30.0% | |
| !! | AATCCTTTTTCATTAGGAAC+TGG | + | chr8.3:36065311-36065330 | None:intergenic | 30.0% |
| !!! | AAAGGATTTGGAGGATTTTT+TGG | - | chr8.3:36065323-36065342 | MS.gene71187:CDS | 30.0% |
| AAACTGTCTGGTATAGTATC+TGG | - | chr8.3:36065791-36065810 | MS.gene71187:CDS | 35.0% | |
| AAGATACTTGGAAAACTGTC+TGG | - | chr8.3:36065779-36065798 | MS.gene71187:CDS | 35.0% | |
| CCTAATGAAAAAGGATTTGG+AGG | - | chr8.3:36065314-36065333 | MS.gene71187:CDS | 35.0% | |
| CTTCCAGTTCCTAATGAAAA+AGG | - | chr8.3:36065305-36065324 | MS.gene71187:CDS | 35.0% | |
| TTGGGAGATGAAAAGATACT+TGG | - | chr8.3:36065767-36065786 | MS.gene71187:CDS | 35.0% | |
| !! | CCTCCAAATCCTTTTTCATT+AGG | + | chr8.3:36065317-36065336 | None:intergenic | 35.0% |
| !! | CTTTTTCATTAGGAACTGGA+AGG | + | chr8.3:36065307-36065326 | None:intergenic | 35.0% |
| !!! | GGATTTTTTGGTGTAGGATT+TGG | - | chr8.3:36065335-36065354 | MS.gene71187:CDS | 35.0% |
| !!! | TTTGGAGGATTTTTTGGTGT+AGG | - | chr8.3:36065329-36065348 | MS.gene71187:CDS | 35.0% |
| !!! | TTTTTTGGTGTAGGATTTGG+AGG | - | chr8.3:36065338-36065357 | MS.gene71187:CDS | 35.0% |
| AATCCTTCAGGTAGTCCTTT+AGG | + | chr8.3:36065725-36065744 | None:intergenic | 40.0% | |
| GATTCTGATCCTGATCAAGA+CGG | - | chr8.3:36065260-36065279 | MS.gene71187:CDS | 40.0% | |
| TTTCCTGATGTAGGATCTAG+AGG | - | chr8.3:36065608-36065627 | MS.gene71187:CDS | 40.0% | |
| ! | ATTGCTCTCTTTGTGCTGTT+GGG | - | chr8.3:36065194-36065213 | MS.gene71187:CDS | 40.0% |
| !! | TTTTCTGGAGGACTTCCTAA+AGG | - | chr8.3:36065707-36065726 | MS.gene71187:CDS | 40.0% |
| AAACCTCTAGATCCTACACC+AGG | + | chr8.3:36065749-36065768 | None:intergenic | 45.0% | |
| AATCCACTAGATCCTACACC+AGG | + | chr8.3:36065434-36065453 | None:intergenic | 45.0% | |
| CATTGCTCTCTTTGTGCTGT+TGG | - | chr8.3:36065193-36065212 | MS.gene71187:CDS | 45.0% | |
| CTGGAGGATTTCCTAGTGTA+GGG | - | chr8.3:36065465-36065484 | MS.gene71187:CDS | 45.0% | |
| CTTCCTAAAGGACTACCTGA+AGG | - | chr8.3:36065719-36065738 | MS.gene71187:CDS | 45.0% | |
| GGTGTAGGATCTAGAGGTTT+GGG | - | chr8.3:36065749-36065768 | MS.gene71187:CDS | 45.0% | |
| GGTTTATAGCCGTCTTGATC+AGG | + | chr8.3:36065272-36065291 | None:intergenic | 45.0% | |
| TGGTGTAGGATCTAGAGGTT+TGG | - | chr8.3:36065748-36065767 | MS.gene71187:CDS | 45.0% | |
| TGTCCTCTAGATCCTACATC+AGG | + | chr8.3:36065614-36065633 | None:intergenic | 45.0% | |
| TTTCCTAGTGTAGGGTCTAG+AGG | - | chr8.3:36065473-36065492 | MS.gene71187:CDS | 45.0% | |
| TTTCCTGGTGTAGGATCTAG+AGG | - | chr8.3:36065428-36065447 | MS.gene71187:CDS | 45.0% | |
| TTTCCTGGTGTAGGATCTAG+TGG | - | chr8.3:36065428-36065447 | MS.gene71187:CDS | 45.0% | |
| ! | GTAGGATCTGGAGGATTTTC+TGG | - | chr8.3:36065692-36065711 | MS.gene71187:CDS | 45.0% |
| !! | ATAGTATCTGGAGTACTGCC+TGG | - | chr8.3:36065803-36065822 | MS.gene71187:CDS | 45.0% |
| !! | GTAGGATCTAGTGGATTTCC+TGG | - | chr8.3:36065437-36065456 | MS.gene71187:CDS | 45.0% |
| AATCCACCAGATCCTACACC+AGG | + | chr8.3:36065389-36065408 | None:intergenic | 50.0% | |
| AATCCTCCAGATCCTACACC+AGG | + | chr8.3:36065569-36065588 | None:intergenic | 50.0% | |
| ACGGCTATAAACCCGAAGGT+GGG | - | chr8.3:36065279-36065298 | MS.gene71187:CDS | 50.0% | |
| AGACTGCCTAGAGGATTTCC+TGG | - | chr8.3:36065368-36065387 | MS.gene71187:CDS | 50.0% | |
| AGTCCTCTAGACCCTACACT+AGG | + | chr8.3:36065479-36065498 | None:intergenic | 50.0% | |
| CAAGACGGCTATAAACCCGA+AGG | - | chr8.3:36065275-36065294 | MS.gene71187:CDS | 50.0% | |
| CCTACACCAGGAAATCCTCT+AGG | + | chr8.3:36065377-36065396 | None:intergenic | 50.0% | |
| CCTACACCAGGAAATCCTTC+AGG | + | chr8.3:36065737-36065756 | None:intergenic | 50.0% | |
| CCTACACTAGGAAATCCTCC+AGG | + | chr8.3:36065467-36065486 | None:intergenic | 50.0% | |
| CCTACATCAGGAAATCCTCC+AGG | + | chr8.3:36065602-36065621 | None:intergenic | 50.0% | |
| CCTAGAGGATTTCCTGGTGT+AGG | - | chr8.3:36065374-36065393 | MS.gene71187:CDS | 50.0% | |
| CCTGAAGGATTTCCTGGTGT+AGG | - | chr8.3:36065734-36065753 | MS.gene71187:CDS | 50.0% | |
| CCTGGAGGATTTCCTAGTGT+AGG | - | chr8.3:36065464-36065483 | MS.gene71187:CDS | 50.0% | |
| CCTGGAGGATTTCCTGATGT+AGG | - | chr8.3:36065599-36065618 | MS.gene71187:CDS | 50.0% | |
| GGAAATCCTCTAGGCAGTCT+AGG | + | chr8.3:36065368-36065387 | None:intergenic | 50.0% | |
| GGACTACCTGAAGGATTTCC+TGG | - | chr8.3:36065728-36065747 | MS.gene71187:CDS | 50.0% | |
| GGATTTCCTAGACTGCCTAG+AGG | - | chr8.3:36065359-36065378 | MS.gene71187:CDS | 50.0% | |
| GGATTTCCTGGTGTAGGATC+TGG | - | chr8.3:36065380-36065399 | MS.gene71187:CDS | 50.0% | |
| GTAGGATCTGGAGGATTTCC+TGG | - | chr8.3:36065572-36065591 | MS.gene71187:CDS | 50.0% | |
| TGTCCTCTAGATCCTACACC+AGG | + | chr8.3:36065515-36065534 | None:intergenic | 50.0% | |
| TTTCCTGGTGTAGGATCTGG+AGG | - | chr8.3:36065383-36065402 | MS.gene71187:CDS | 50.0% | |
| TTTCCTGGTGTAGGATCTGG+TGG | - | chr8.3:36065383-36065402 | MS.gene71187:CDS | 50.0% | |
| ! | GGATCTGGAGGATTTTCTGG+AGG | - | chr8.3:36065695-36065714 | MS.gene71187:CDS | 50.0% |
| !! | GTAGGATCTGGTGGATTTCC+TGG | - | chr8.3:36065392-36065411 | MS.gene71187:CDS | 50.0% |
| AACTGGAAGGCTCCCACCTT+CGG | + | chr8.3:36065294-36065313 | None:intergenic | 55.0% | |
| CAACAGCCTGGAGGATTTCC+TGG | - | chr8.3:36065548-36065567 | MS.gene71187:CDS | 55.0% | |
| CCAGGCTGTTGAAATCCTCC+AGG | + | chr8.3:36065539-36065558 | None:intergenic | 55.0% | |
| CCTACACCAGGAAATCCTCC+AGG | + | chr8.3:36065422-36065441 | None:intergenic | 55.0% | |
| CCTGGAGGATTTCAACAGCC+TGG | - | chr8.3:36065536-36065555 | MS.gene71187:CDS | 55.0% | |
| CCTGGAGGATTTCCTGGTGT+AGG | - | chr8.3:36065419-36065438 | MS.gene71187:CDS | 55.0% | |
| CGACAGCCTGAAGGATTTCC+TGG | - | chr8.3:36065647-36065666 | MS.gene71187:CDS | 55.0% | |
| GAAGGATTTCCTGGACTGCC+TGG | - | chr8.3:36065656-36065675 | MS.gene71187:CDS | 55.0% | |
| GACGGCTATAAACCCGAAGG+TGG | - | chr8.3:36065278-36065297 | MS.gene71187:CDS | 55.0% | |
| GGAAATCCTCCAGGTAGTCC+AGG | + | chr8.3:36065593-36065612 | None:intergenic | 55.0% | |
| GGAGGATTTCAACAGCCTGG+AGG | - | chr8.3:36065539-36065558 | MS.gene71187:CDS | 55.0% | |
| GGAGGATTTCCTGGACTACC+TGG | - | chr8.3:36065581-36065600 | MS.gene71187:CDS | 55.0% | |
| GGAGGATTTCGACAGCCTGA+AGG | - | chr8.3:36065638-36065657 | MS.gene71187:CDS | 55.0% | |
| GGATTTCCTGGACTACCTGG+AGG | - | chr8.3:36065584-36065603 | MS.gene71187:CDS | 55.0% | |
| GGCAGTCCAGGAAATCCTTC+AGG | + | chr8.3:36065656-36065675 | None:intergenic | 55.0% | |
| GTAGGATCTAGAGGACAGCC+TGG | - | chr8.3:36065518-36065537 | MS.gene71187:CDS | 55.0% | |
| TACTGCCTGGTGTACCAACC+AGG | - | chr8.3:36065816-36065835 | MS.gene71187:CDS | 55.0% | |
| TCAGGCTGTCGAAATCCTCC+AGG | + | chr8.3:36065638-36065657 | None:intergenic | 55.0% | |
| ! | AGTGGATTTCCTGGACTGCC+TGG | - | chr8.3:36065446-36065465 | MS.gene71187:CDS | 55.0% |
| ACTGGAAGGCTCCCACCTTC+GGG | + | chr8.3:36065293-36065312 | None:intergenic | 60.0% | |
| GGAAATCCTCCAGGCAGTCC+AGG | + | chr8.3:36065413-36065432 | None:intergenic | 60.0% | |
| GGACTGCCTGGAGGATTTCC+TGG | - | chr8.3:36065413-36065432 | MS.gene71187:CDS | 60.0% | |
| GGATCTAGAGGACAGCCTGG+AGG | - | chr8.3:36065521-36065540 | MS.gene71187:CDS | 60.0% | |
| GGATTTCCTGGACTGCCTGG+AGG | - | chr8.3:36065404-36065423 | MS.gene71187:CDS | 60.0% | |
| GTAGGGTCTAGAGGACTGCC+TGG | - | chr8.3:36065482-36065501 | MS.gene71187:CDS | 60.0% | |
| ! | GGTGGATTTCCTGGACTGCC+TGG | - | chr8.3:36065401-36065420 | MS.gene71187:CDS | 60.0% |
| GGGTCTAGAGGACTGCCTGG+AGG | - | chr8.3:36065485-36065504 | MS.gene71187:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 36065170 | 36065841 | 36065170 | ID=MS.gene71187 |
| chr8.3 | mRNA | 36065170 | 36065841 | 36065170 | ID=MS.gene71187.t1;Parent=MS.gene71187 |
| chr8.3 | exon | 36065170 | 36065841 | 36065170 | ID=MS.gene71187.t1.exon1;Parent=MS.gene71187.t1 |
| chr8.3 | CDS | 36065170 | 36065841 | 36065170 | ID=cds.MS.gene71187.t1;Parent=MS.gene71187.t1 |
| Gene Sequence |
| Protein sequence |
