Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene71351.t1 | XP_003615979.1 | 96 | 323 | 13 | 0 | 1 | 323 | 1 | 323 | 1.50E-179 | 638.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene71351.t1 | P22195 | 58.4 | 320 | 123 | 5 | 3 | 321 | 6 | 316 | 2.1e-97 | 357.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene71351.t1 | G7KFK6 | 96.0 | 323 | 13 | 0 | 1 | 323 | 1 | 323 | 1.1e-179 | 638.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene053406 | MS.gene71351 | 0.809799 | 1.58E-50 | -1.69E-46 |
MS.gene054277 | MS.gene71351 | 0.835611 | 1.52E-56 | -1.69E-46 |
MS.gene054742 | MS.gene71351 | 0.822091 | 2.85E-53 | -1.69E-46 |
MS.gene056680 | MS.gene71351 | 0.804391 | 2.21E-49 | -1.69E-46 |
MS.gene056920 | MS.gene71351 | 0.826296 | 2.93E-54 | -1.69E-46 |
MS.gene060087 | MS.gene71351 | 0.829118 | 6.15E-55 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene71351.t1 | MTR_5g074740 | 95.975 | 323 | 13 | 0 | 1 | 323 | 1 | 323 | 0.0 | 647 |
MS.gene71351.t1 | MTR_5g074760 | 95.342 | 322 | 15 | 0 | 1 | 322 | 1 | 322 | 0.0 | 641 |
MS.gene71351.t1 | MTR_5g074710 | 87.307 | 323 | 41 | 0 | 1 | 323 | 1 | 323 | 0.0 | 598 |
MS.gene71351.t1 | MTR_5g074860 | 72.240 | 317 | 88 | 0 | 4 | 320 | 8 | 324 | 4.85e-173 | 483 |
MS.gene71351.t1 | MTR_3g467600 | 63.750 | 320 | 114 | 2 | 4 | 321 | 5 | 324 | 1.63e-144 | 410 |
MS.gene71351.t1 | MTR_5g074700 | 87.168 | 226 | 15 | 1 | 98 | 323 | 5 | 216 | 3.36e-143 | 403 |
MS.gene71351.t1 | MTR_5g074860 | 62.145 | 317 | 81 | 1 | 4 | 320 | 8 | 285 | 8.78e-140 | 397 |
MS.gene71351.t1 | MTR_4g029170 | 60.615 | 325 | 120 | 5 | 1 | 321 | 1 | 321 | 1.64e-134 | 385 |
MS.gene71351.t1 | MTR_4g029180 | 64.189 | 296 | 100 | 4 | 28 | 321 | 30 | 321 | 3.39e-129 | 371 |
MS.gene71351.t1 | MTR_5g074970 | 56.250 | 320 | 127 | 8 | 7 | 321 | 15 | 326 | 3.38e-119 | 346 |
MS.gene71351.t1 | MTR_3g466200 | 55.000 | 320 | 134 | 8 | 6 | 321 | 7 | 320 | 9.18e-118 | 342 |
MS.gene71351.t1 | MTR_2g084080 | 54.658 | 322 | 140 | 5 | 1 | 321 | 1 | 317 | 1.42e-117 | 342 |
MS.gene71351.t1 | MTR_3g094650 | 55.590 | 322 | 134 | 6 | 3 | 321 | 7 | 322 | 3.22e-116 | 338 |
MS.gene71351.t1 | MTR_5g083860 | 54.630 | 324 | 138 | 6 | 1 | 321 | 8 | 325 | 1.15e-115 | 337 |
MS.gene71351.t1 | MTR_2g084010 | 57.285 | 302 | 124 | 4 | 21 | 321 | 21 | 318 | 1.90e-115 | 336 |
MS.gene71351.t1 | MTR_2g084020 | 55.696 | 316 | 133 | 5 | 9 | 321 | 7 | 318 | 8.21e-115 | 335 |
MS.gene71351.t1 | MTR_4g029200 | 55.229 | 306 | 131 | 4 | 17 | 321 | 38 | 338 | 9.40e-115 | 335 |
MS.gene71351.t1 | MTR_3g072190 | 55.031 | 318 | 135 | 5 | 7 | 321 | 6 | 318 | 9.46e-115 | 335 |
MS.gene71351.t1 | MTR_2g084110 | 56.013 | 316 | 131 | 6 | 9 | 321 | 7 | 317 | 1.94e-114 | 334 |
MS.gene71351.t1 | MTR_2g084000 | 53.560 | 323 | 144 | 5 | 1 | 321 | 1 | 319 | 2.98e-114 | 333 |
MS.gene71351.t1 | MTR_2g084090 | 54.516 | 310 | 134 | 6 | 14 | 321 | 14 | 318 | 3.45e-111 | 325 |
MS.gene71351.t1 | MTR_3g094670 | 56.250 | 320 | 128 | 6 | 5 | 321 | 12 | 322 | 4.55e-111 | 325 |
MS.gene71351.t1 | MTR_1g115900 | 53.774 | 318 | 138 | 7 | 7 | 321 | 10 | 321 | 1.76e-110 | 324 |
MS.gene71351.t1 | MTR_7g072480 | 54.037 | 322 | 141 | 5 | 1 | 321 | 1 | 316 | 5.21e-110 | 322 |
MS.gene71351.t1 | MTR_3g094630 | 56.211 | 322 | 132 | 6 | 3 | 321 | 7 | 322 | 5.40e-110 | 323 |
MS.gene71351.t1 | MTR_7g072510 | 51.757 | 313 | 142 | 5 | 10 | 321 | 8 | 312 | 6.09e-108 | 317 |
MS.gene71351.t1 | MTR_3g466180 | 53.822 | 314 | 139 | 4 | 9 | 321 | 15 | 323 | 5.76e-106 | 312 |
MS.gene71351.t1 | MTR_7g026990 | 50.316 | 316 | 151 | 6 | 7 | 321 | 12 | 322 | 5.56e-105 | 310 |
MS.gene71351.t1 | MTR_4g029190 | 52.145 | 303 | 136 | 6 | 23 | 321 | 43 | 340 | 1.27e-104 | 310 |
MS.gene71351.t1 | MTR_4g083710 | 50.000 | 320 | 151 | 6 | 7 | 321 | 9 | 324 | 3.47e-104 | 308 |
MS.gene71351.t1 | MTR_5g021060 | 52.787 | 305 | 132 | 5 | 25 | 321 | 30 | 330 | 7.94e-104 | 307 |
MS.gene71351.t1 | MTR_8g076820 | 51.803 | 305 | 135 | 5 | 25 | 321 | 30 | 330 | 3.73e-101 | 300 |
MS.gene71351.t1 | MTR_4g074995 | 48.580 | 317 | 141 | 7 | 10 | 321 | 9 | 308 | 2.82e-96 | 287 |
MS.gene71351.t1 | MTR_2g028980 | 48.589 | 319 | 153 | 5 | 12 | 322 | 16 | 331 | 6.22e-94 | 283 |
MS.gene71351.t1 | MTR_7g093370 | 45.370 | 324 | 165 | 5 | 7 | 321 | 51 | 371 | 8.68e-94 | 283 |
MS.gene71351.t1 | MTR_2g029560 | 46.440 | 323 | 161 | 6 | 8 | 321 | 6 | 325 | 1.60e-93 | 281 |
MS.gene71351.t1 | MTR_1g022970 | 47.869 | 305 | 148 | 4 | 25 | 321 | 46 | 347 | 1.04e-92 | 280 |
MS.gene71351.t1 | MTR_4g125940 | 48.765 | 324 | 150 | 7 | 10 | 322 | 12 | 330 | 4.56e-92 | 277 |
MS.gene71351.t1 | MTR_1g054205 | 43.939 | 330 | 171 | 6 | 1 | 321 | 2 | 326 | 7.45e-92 | 277 |
MS.gene71351.t1 | MTR_2g029800 | 49.186 | 307 | 145 | 5 | 23 | 321 | 27 | 330 | 1.42e-91 | 277 |
MS.gene71351.t1 | MTR_3g072190 | 55.294 | 255 | 108 | 4 | 68 | 321 | 2 | 251 | 3.96e-91 | 272 |
MS.gene71351.t1 | MTR_2g040000 | 47.812 | 320 | 145 | 9 | 16 | 321 | 20 | 331 | 1.98e-90 | 273 |
MS.gene71351.t1 | MTR_2g029815 | 45.231 | 325 | 167 | 4 | 5 | 321 | 9 | 330 | 5.83e-90 | 273 |
MS.gene71351.t1 | MTR_4g074990 | 45.794 | 321 | 146 | 7 | 6 | 321 | 8 | 305 | 2.68e-89 | 269 |
MS.gene71351.t1 | MTR_5g017850 | 48.457 | 324 | 150 | 10 | 9 | 321 | 9 | 326 | 5.23e-89 | 269 |
MS.gene71351.t1 | MTR_2g029830 | 46.906 | 307 | 152 | 4 | 23 | 321 | 26 | 329 | 9.03e-89 | 270 |
MS.gene71351.t1 | MTR_2g029820 | 44.923 | 325 | 168 | 4 | 5 | 321 | 9 | 330 | 4.64e-88 | 268 |
MS.gene71351.t1 | MTR_4g031140 | 44.479 | 326 | 167 | 5 | 3 | 321 | 6 | 324 | 1.07e-87 | 266 |
MS.gene71351.t1 | MTR_4g122640 | 46.254 | 307 | 155 | 5 | 21 | 321 | 34 | 336 | 1.86e-87 | 266 |
MS.gene71351.t1 | MTR_2g029730 | 46.012 | 326 | 164 | 6 | 5 | 321 | 4 | 326 | 4.22e-87 | 265 |
MS.gene71351.t1 | MTR_5g017860 | 47.222 | 324 | 154 | 10 | 9 | 321 | 9 | 326 | 4.25e-87 | 265 |
MS.gene71351.t1 | MTR_2g029860 | 45.928 | 307 | 155 | 4 | 23 | 321 | 27 | 330 | 7.17e-87 | 265 |
MS.gene71351.t1 | MTR_4g030890 | 46.732 | 306 | 149 | 5 | 23 | 321 | 98 | 396 | 4.18e-86 | 265 |
MS.gene71351.t1 | MTR_2g029740 | 44.688 | 320 | 166 | 4 | 11 | 322 | 15 | 331 | 1.22e-85 | 262 |
MS.gene71351.t1 | MTR_4g125940 | 51.971 | 279 | 119 | 6 | 54 | 322 | 2 | 275 | 1.50e-85 | 259 |
MS.gene71351.t1 | MTR_5g014100 | 47.419 | 310 | 146 | 6 | 25 | 321 | 26 | 331 | 1.78e-85 | 261 |
MS.gene71351.t1 | MTR_5g049280 | 45.399 | 326 | 164 | 8 | 7 | 321 | 15 | 337 | 3.10e-85 | 260 |
MS.gene71351.t1 | MTR_2g029910 | 45.806 | 310 | 156 | 5 | 23 | 323 | 28 | 334 | 1.43e-83 | 256 |
MS.gene71351.t1 | MTR_4g074980 | 45.426 | 317 | 142 | 8 | 6 | 321 | 8 | 294 | 1.58e-83 | 254 |
MS.gene71351.t1 | MTR_2g029750 | 45.000 | 320 | 165 | 5 | 11 | 322 | 15 | 331 | 4.16e-83 | 255 |
MS.gene71351.t1 | MTR_2g029850 | 44.625 | 307 | 159 | 4 | 23 | 321 | 27 | 330 | 7.56e-81 | 249 |
MS.gene71351.t1 | MTR_1g077000 | 42.405 | 316 | 172 | 7 | 7 | 321 | 21 | 327 | 5.37e-80 | 246 |
MS.gene71351.t1 | MTR_1g101830 | 44.000 | 325 | 160 | 11 | 5 | 321 | 12 | 322 | 8.78e-79 | 243 |
MS.gene71351.t1 | MTR_3g092990 | 40.061 | 327 | 182 | 6 | 4 | 321 | 5 | 326 | 2.20e-75 | 234 |
MS.gene71351.t1 | MTR_0155s0040 | 42.333 | 300 | 163 | 8 | 23 | 321 | 25 | 315 | 2.55e-75 | 234 |
MS.gene71351.t1 | MTR_4g074980 | 48.606 | 251 | 119 | 6 | 6 | 251 | 8 | 253 | 8.73e-74 | 228 |
MS.gene71351.t1 | MTR_1g038680 | 41.118 | 304 | 164 | 7 | 29 | 321 | 33 | 332 | 1.09e-72 | 228 |
MS.gene71351.t1 | MTR_4g046713 | 40.606 | 330 | 181 | 9 | 1 | 321 | 3 | 326 | 4.27e-72 | 226 |
MS.gene71351.t1 | MTR_1g086490 | 39.521 | 334 | 181 | 5 | 7 | 323 | 13 | 342 | 7.77e-72 | 226 |
MS.gene71351.t1 | MTR_1g086320 | 39.077 | 325 | 184 | 5 | 7 | 321 | 13 | 333 | 1.18e-71 | 225 |
MS.gene71351.t1 | MTR_2g088770 | 41.088 | 331 | 179 | 10 | 1 | 321 | 1 | 325 | 1.96e-71 | 224 |
MS.gene71351.t1 | MTR_2g029830 | 47.490 | 259 | 125 | 4 | 71 | 321 | 6 | 261 | 2.32e-70 | 220 |
MS.gene71351.t1 | MTR_1g025980 | 40.184 | 326 | 174 | 10 | 1 | 316 | 1 | 315 | 2.45e-69 | 219 |
MS.gene71351.t1 | MTR_5g022870 | 39.210 | 329 | 179 | 9 | 1 | 321 | 1 | 316 | 3.05e-68 | 216 |
MS.gene71351.t1 | MTR_8g075100 | 40.656 | 305 | 162 | 8 | 25 | 321 | 26 | 319 | 4.38e-67 | 213 |
MS.gene71351.t1 | MTR_7g029030 | 41.176 | 323 | 178 | 8 | 4 | 321 | 5 | 320 | 2.23e-66 | 211 |
MS.gene71351.t1 | MTR_2g008710 | 41.967 | 305 | 155 | 9 | 29 | 321 | 31 | 325 | 1.68e-65 | 209 |
MS.gene71351.t1 | MTR_7g107520 | 40.000 | 330 | 179 | 9 | 1 | 321 | 1 | 320 | 2.57e-65 | 208 |
MS.gene71351.t1 | MTR_6g027440 | 36.335 | 322 | 192 | 6 | 5 | 321 | 1 | 314 | 1.46e-64 | 206 |
MS.gene71351.t1 | MTR_3g092990 | 37.920 | 327 | 178 | 7 | 4 | 321 | 5 | 315 | 7.28e-64 | 204 |
MS.gene71351.t1 | MTR_4g133800 | 40.132 | 304 | 160 | 11 | 29 | 323 | 45 | 335 | 2.76e-62 | 201 |
MS.gene71351.t1 | MTR_1g009750 | 38.138 | 333 | 183 | 10 | 3 | 321 | 5 | 328 | 1.41e-61 | 199 |
MS.gene71351.t1 | MTR_7g086820 | 37.049 | 305 | 178 | 7 | 23 | 322 | 18 | 313 | 6.36e-61 | 197 |
MS.gene71351.t1 | MTR_8g062780 | 39.617 | 313 | 174 | 7 | 21 | 323 | 19 | 326 | 2.50e-60 | 196 |
MS.gene71351.t1 | MTR_4g087965 | 40.065 | 307 | 166 | 9 | 24 | 317 | 41 | 342 | 3.39e-60 | 196 |
MS.gene71351.t1 | MTR_2g437770 | 41.311 | 305 | 158 | 10 | 25 | 321 | 50 | 341 | 5.69e-60 | 196 |
MS.gene71351.t1 | MTR_4g114210 | 39.077 | 325 | 170 | 11 | 14 | 321 | 7 | 320 | 8.85e-60 | 194 |
MS.gene71351.t1 | MTR_4g127670 | 40.256 | 313 | 160 | 10 | 24 | 321 | 23 | 323 | 1.39e-59 | 194 |
MS.gene71351.t1 | MTR_5g016010 | 36.474 | 329 | 190 | 8 | 3 | 317 | 2 | 325 | 7.15e-59 | 192 |
MS.gene71351.t1 | MTR_1g090760 | 36.391 | 327 | 192 | 8 | 8 | 323 | 11 | 332 | 1.52e-58 | 191 |
MS.gene71351.t1 | MTR_4g095450 | 38.095 | 315 | 182 | 7 | 10 | 317 | 12 | 320 | 6.46e-58 | 189 |
MS.gene71351.t1 | MTR_7g086870 | 37.458 | 299 | 176 | 8 | 25 | 321 | 22 | 311 | 4.95e-57 | 187 |
MS.gene71351.t1 | MTR_3g072210 | 52.128 | 188 | 85 | 4 | 136 | 321 | 54 | 238 | 4.37e-56 | 182 |
MS.gene71351.t1 | MTR_2g099175 | 36.218 | 312 | 176 | 9 | 24 | 322 | 35 | 336 | 9.81e-54 | 179 |
MS.gene71351.t1 | MTR_0286s0010 | 35.494 | 324 | 191 | 9 | 10 | 321 | 17 | 334 | 1.49e-53 | 179 |
MS.gene71351.t1 | MTR_6g008075 | 35.494 | 324 | 191 | 9 | 10 | 321 | 17 | 334 | 1.49e-53 | 179 |
MS.gene71351.t1 | MTR_2g077990 | 36.391 | 338 | 169 | 10 | 23 | 320 | 74 | 405 | 2.20e-53 | 180 |
MS.gene71351.t1 | MTR_2g078610 | 36.095 | 338 | 170 | 10 | 23 | 320 | 74 | 405 | 7.84e-53 | 179 |
MS.gene71351.t1 | MTR_2g067440 | 35.417 | 336 | 172 | 9 | 23 | 320 | 58 | 386 | 8.94e-53 | 178 |
MS.gene71351.t1 | MTR_2g008160 | 37.539 | 317 | 165 | 10 | 23 | 321 | 22 | 323 | 2.02e-52 | 175 |
MS.gene71351.t1 | MTR_6g043280 | 35.179 | 307 | 185 | 11 | 20 | 321 | 35 | 332 | 1.46e-50 | 171 |
MS.gene71351.t1 | MTR_6g043240 | 36.482 | 307 | 178 | 11 | 20 | 321 | 37 | 331 | 1.83e-50 | 171 |
MS.gene71351.t1 | MTR_1g066710 | 35.082 | 305 | 186 | 7 | 23 | 321 | 25 | 323 | 7.84e-50 | 169 |
MS.gene71351.t1 | MTR_1g009750 | 34.835 | 333 | 177 | 10 | 3 | 321 | 5 | 311 | 1.23e-49 | 168 |
MS.gene71351.t1 | MTR_6g043460 | 34.154 | 325 | 197 | 8 | 3 | 317 | 7 | 324 | 9.73e-49 | 166 |
MS.gene71351.t1 | MTR_2g078280 | 36.308 | 325 | 161 | 10 | 23 | 307 | 74 | 392 | 2.14e-48 | 167 |
MS.gene71351.t1 | MTR_4g132490 | 31.148 | 305 | 198 | 5 | 24 | 321 | 28 | 327 | 2.57e-48 | 165 |
MS.gene71351.t1 | MTR_1g066380 | 34.314 | 306 | 189 | 7 | 22 | 321 | 24 | 323 | 4.62e-48 | 164 |
MS.gene71351.t1 | MTR_2g008730 | 42.510 | 247 | 123 | 8 | 87 | 321 | 62 | 301 | 1.85e-47 | 162 |
MS.gene71351.t1 | MTR_3g105790 | 34.139 | 331 | 199 | 6 | 1 | 321 | 1 | 322 | 3.62e-47 | 162 |
MS.gene71351.t1 | MTR_1g066640 | 34.426 | 305 | 188 | 7 | 23 | 321 | 25 | 323 | 4.13e-47 | 162 |
MS.gene71351.t1 | MTR_0147s0010 | 32.716 | 324 | 171 | 8 | 25 | 320 | 77 | 381 | 1.99e-45 | 159 |
MS.gene71351.t1 | MTR_2g067450 | 35.783 | 313 | 174 | 10 | 23 | 320 | 9 | 309 | 2.64e-45 | 156 |
MS.gene71351.t1 | MTR_1g066680 | 33.770 | 305 | 189 | 8 | 23 | 321 | 25 | 322 | 2.66e-45 | 157 |
MS.gene71351.t1 | MTR_7g072490 | 41.224 | 245 | 84 | 6 | 71 | 314 | 2 | 187 | 9.04e-44 | 149 |
MS.gene71351.t1 | MTR_3g072260 | 57.364 | 129 | 52 | 2 | 7 | 133 | 6 | 133 | 1.86e-42 | 144 |
MS.gene71351.t1 | MTR_4g132110 | 32.566 | 304 | 193 | 6 | 25 | 322 | 32 | 329 | 2.07e-42 | 149 |
MS.gene71351.t1 | MTR_5g033470 | 31.290 | 310 | 195 | 8 | 25 | 321 | 73 | 377 | 6.40e-42 | 149 |
MS.gene71351.t1 | MTR_2g008160 | 34.727 | 311 | 147 | 10 | 23 | 321 | 22 | 288 | 9.29e-41 | 144 |
MS.gene71351.t1 | MTR_4g132110 | 32.248 | 307 | 195 | 7 | 25 | 322 | 32 | 334 | 1.99e-40 | 144 |
MS.gene71351.t1 | MTR_5g074770 | 56.250 | 112 | 44 | 1 | 209 | 320 | 2 | 108 | 7.06e-39 | 133 |
MS.gene71351.t1 | MTR_2g029880 | 42.021 | 188 | 93 | 3 | 143 | 323 | 12 | 190 | 2.96e-38 | 135 |
MS.gene71351.t1 | MTR_2g008160 | 42.373 | 177 | 95 | 5 | 23 | 199 | 22 | 191 | 1.31e-37 | 133 |
MS.gene71351.t1 | MTR_1g066380 | 32.819 | 259 | 162 | 7 | 69 | 321 | 3 | 255 | 3.70e-35 | 128 |
MS.gene71351.t1 | MTR_3g105790 | 35.417 | 240 | 140 | 5 | 92 | 321 | 12 | 246 | 4.32e-30 | 115 |
MS.gene71351.t1 | MTR_2g077980 | 29.391 | 279 | 146 | 11 | 87 | 320 | 11 | 283 | 1.86e-21 | 92.8 |
MS.gene71351.t1 | MTR_2g078560 | 30.568 | 229 | 116 | 7 | 131 | 320 | 95 | 319 | 1.23e-20 | 90.9 |
MS.gene71351.t1 | MTR_3g462850 | 39.716 | 141 | 74 | 5 | 192 | 321 | 9 | 149 | 2.74e-20 | 86.3 |
MS.gene71351.t1 | MTR_1g089005 | 38.235 | 136 | 74 | 4 | 9 | 138 | 1 | 132 | 8.37e-19 | 82.4 |
MS.gene71351.t1 | MTR_6g048160 | 54.795 | 73 | 28 | 3 | 64 | 136 | 22 | 89 | 4.77e-18 | 78.2 |
MS.gene71351.t1 | MTR_4g031040 | 33.728 | 169 | 73 | 3 | 84 | 252 | 1 | 130 | 9.88e-18 | 78.6 |
MS.gene71351.t1 | MTR_5g058120 | 35.032 | 157 | 93 | 3 | 163 | 317 | 6 | 155 | 1.33e-17 | 81.3 |
MS.gene71351.t1 | MTR_3g086710 | 57.627 | 59 | 25 | 0 | 12 | 70 | 6 | 64 | 6.73e-17 | 75.1 |
MS.gene71351.t1 | MTR_4g114220 | 45.652 | 92 | 37 | 4 | 51 | 140 | 29 | 109 | 1.43e-16 | 75.9 |
MS.gene71351.t1 | MTR_2g029930 | 43.434 | 99 | 28 | 3 | 23 | 107 | 17 | 101 | 1.76e-16 | 74.3 |
MS.gene71351.t1 | MTR_7g086790 | 30.481 | 187 | 113 | 6 | 72 | 258 | 17 | 186 | 6.16e-16 | 75.5 |
MS.gene71351.t1 | MTR_1g098320 | 40.741 | 81 | 46 | 1 | 242 | 322 | 47 | 125 | 1.19e-11 | 62.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene71351.t1 | AT5G05340 | 57.285 | 302 | 121 | 5 | 23 | 321 | 28 | 324 | 1.38e-118 | 345 |
MS.gene71351.t1 | AT1G14550 | 50.625 | 320 | 151 | 6 | 5 | 321 | 6 | 321 | 1.15e-103 | 306 |
MS.gene71351.t1 | AT5G58390 | 53.145 | 318 | 140 | 6 | 8 | 321 | 4 | 316 | 1.43e-103 | 306 |
MS.gene71351.t1 | AT2G18150 | 49.837 | 307 | 142 | 5 | 23 | 321 | 34 | 336 | 2.18e-102 | 304 |
MS.gene71351.t1 | AT5G58400 | 50.000 | 324 | 152 | 7 | 3 | 321 | 7 | 325 | 2.29e-101 | 301 |
MS.gene71351.t1 | AT5G66390 | 51.307 | 306 | 137 | 5 | 25 | 322 | 33 | 334 | 3.35e-101 | 301 |
MS.gene71351.t1 | AT4G36430 | 49.511 | 307 | 143 | 5 | 23 | 321 | 28 | 330 | 6.22e-99 | 295 |
MS.gene71351.t1 | AT2G18140 | 50.492 | 305 | 139 | 5 | 25 | 321 | 35 | 335 | 1.82e-98 | 294 |
MS.gene71351.t1 | AT1G14540 | 49.502 | 301 | 146 | 5 | 23 | 321 | 19 | 315 | 3.31e-95 | 285 |
MS.gene71351.t1 | AT5G06720 | 44.272 | 323 | 169 | 4 | 7 | 321 | 14 | 333 | 2.40e-93 | 281 |
MS.gene71351.t1 | AT4G08770 | 48.726 | 314 | 148 | 6 | 18 | 321 | 17 | 327 | 5.19e-93 | 280 |
MS.gene71351.t1 | AT1G44970 | 47.231 | 307 | 151 | 4 | 23 | 321 | 43 | 346 | 5.42e-93 | 280 |
MS.gene71351.t1 | AT3G50990 | 47.115 | 312 | 153 | 5 | 19 | 322 | 35 | 342 | 4.42e-92 | 278 |
MS.gene71351.t1 | AT5G06730 | 43.344 | 323 | 172 | 4 | 7 | 321 | 15 | 334 | 2.43e-90 | 274 |
MS.gene71351.t1 | AT2G38390 | 48.377 | 308 | 147 | 5 | 23 | 321 | 29 | 333 | 6.91e-90 | 273 |
MS.gene71351.t1 | AT4G08780 | 47.452 | 314 | 152 | 6 | 18 | 321 | 17 | 327 | 1.93e-89 | 271 |
MS.gene71351.t1 | AT1G49570 | 48.693 | 306 | 141 | 7 | 23 | 317 | 46 | 346 | 1.78e-87 | 266 |
MS.gene71351.t1 | AT3G49120 | 46.326 | 313 | 155 | 6 | 19 | 321 | 26 | 335 | 1.85e-87 | 266 |
MS.gene71351.t1 | AT2G38380 | 48.052 | 308 | 148 | 5 | 23 | 321 | 29 | 333 | 4.12e-87 | 265 |
MS.gene71351.t1 | AT3G32980 | 46.926 | 309 | 151 | 6 | 23 | 321 | 29 | 334 | 4.23e-87 | 265 |
MS.gene71351.t1 | AT5G19890 | 45.732 | 328 | 157 | 10 | 6 | 322 | 11 | 328 | 1.23e-86 | 263 |
MS.gene71351.t1 | AT3G49110 | 46.602 | 309 | 152 | 6 | 23 | 321 | 31 | 336 | 4.02e-86 | 263 |
MS.gene71351.t1 | AT1G68850 | 43.787 | 338 | 165 | 10 | 4 | 321 | 3 | 335 | 8.02e-85 | 259 |
MS.gene71351.t1 | AT4G16270 | 47.841 | 301 | 141 | 8 | 30 | 321 | 55 | 348 | 1.15e-84 | 259 |
MS.gene71351.t1 | AT2G35380 | 45.260 | 327 | 161 | 7 | 8 | 321 | 14 | 335 | 5.74e-83 | 254 |
MS.gene71351.t1 | AT5G51890 | 44.308 | 325 | 161 | 11 | 8 | 321 | 7 | 322 | 2.56e-81 | 249 |
MS.gene71351.t1 | AT2G22420 | 41.304 | 322 | 171 | 8 | 11 | 322 | 7 | 320 | 1.18e-79 | 246 |
MS.gene71351.t1 | AT5G19880 | 43.807 | 331 | 164 | 8 | 5 | 321 | 7 | 329 | 3.77e-79 | 244 |
MS.gene71351.t1 | AT1G71695 | 42.997 | 307 | 166 | 6 | 19 | 321 | 38 | 339 | 3.37e-78 | 243 |
MS.gene71351.t1 | AT3G01190 | 43.750 | 304 | 156 | 7 | 25 | 321 | 26 | 321 | 6.67e-75 | 233 |
MS.gene71351.t1 | AT5G42180 | 40.244 | 328 | 176 | 9 | 1 | 320 | 1 | 316 | 6.76e-73 | 228 |
MS.gene71351.t1 | AT5G15180 | 41.796 | 323 | 174 | 7 | 7 | 321 | 13 | 329 | 9.35e-73 | 228 |
MS.gene71351.t1 | AT4G33420 | 42.282 | 298 | 162 | 7 | 25 | 321 | 37 | 325 | 1.97e-72 | 227 |
MS.gene71351.t1 | AT4G33420 | 42.282 | 298 | 162 | 7 | 25 | 321 | 84 | 372 | 9.03e-72 | 227 |
MS.gene71351.t1 | AT4G11290 | 38.889 | 324 | 183 | 8 | 8 | 321 | 8 | 326 | 6.10e-71 | 223 |
MS.gene71351.t1 | AT1G05240 | 41.667 | 300 | 158 | 7 | 28 | 317 | 29 | 321 | 4.71e-70 | 221 |
MS.gene71351.t1 | AT1G05250 | 41.667 | 300 | 158 | 7 | 28 | 317 | 29 | 321 | 4.71e-70 | 221 |
MS.gene71351.t1 | AT3G03670 | 38.509 | 322 | 182 | 8 | 8 | 321 | 8 | 321 | 5.49e-70 | 221 |
MS.gene71351.t1 | AT1G05260 | 38.973 | 331 | 186 | 9 | 1 | 321 | 1 | 325 | 6.49e-70 | 221 |
MS.gene71351.t1 | AT5G64120 | 43.189 | 301 | 152 | 10 | 29 | 321 | 39 | 328 | 3.17e-68 | 216 |
MS.gene71351.t1 | AT3G21770 | 40.000 | 310 | 171 | 8 | 17 | 317 | 21 | 324 | 1.33e-67 | 215 |
MS.gene71351.t1 | AT5G40150 | 38.487 | 304 | 177 | 6 | 23 | 321 | 30 | 328 | 1.12e-62 | 202 |
MS.gene71351.t1 | AT5G17820 | 36.615 | 325 | 175 | 10 | 5 | 321 | 12 | 313 | 3.96e-61 | 197 |
MS.gene71351.t1 | AT3G28200 | 37.294 | 303 | 181 | 6 | 23 | 321 | 19 | 316 | 1.10e-60 | 196 |
MS.gene71351.t1 | AT5G17820 | 36.420 | 324 | 177 | 9 | 5 | 321 | 65 | 366 | 3.89e-60 | 197 |
MS.gene71351.t1 | AT2G41480 | 37.576 | 330 | 181 | 10 | 5 | 321 | 11 | 328 | 4.22e-60 | 195 |
MS.gene71351.t1 | AT5G39580 | 38.700 | 323 | 180 | 10 | 7 | 321 | 7 | 319 | 1.72e-59 | 194 |
MS.gene71351.t1 | AT1G30870 | 40.584 | 308 | 159 | 11 | 25 | 321 | 51 | 345 | 3.50e-58 | 191 |
MS.gene71351.t1 | AT2G35380 | 45.020 | 251 | 121 | 6 | 84 | 321 | 1 | 247 | 5.39e-58 | 187 |
MS.gene71351.t1 | AT4G26010 | 35.737 | 319 | 190 | 10 | 5 | 321 | 4 | 309 | 5.73e-58 | 189 |
MS.gene71351.t1 | AT4G37530 | 39.617 | 313 | 167 | 9 | 23 | 321 | 25 | 329 | 7.16e-58 | 189 |
MS.gene71351.t1 | AT4G26010 | 35.737 | 319 | 190 | 10 | 5 | 321 | 32 | 337 | 8.56e-58 | 190 |
MS.gene71351.t1 | AT2G18980 | 36.607 | 336 | 185 | 11 | 1 | 321 | 1 | 323 | 1.04e-57 | 189 |
MS.gene71351.t1 | AT5G47000 | 38.037 | 326 | 187 | 8 | 5 | 323 | 15 | 332 | 1.68e-57 | 189 |
MS.gene71351.t1 | AT5G22410 | 33.639 | 327 | 196 | 9 | 3 | 318 | 6 | 322 | 2.03e-57 | 189 |
MS.gene71351.t1 | AT4G17690 | 38.535 | 314 | 181 | 7 | 16 | 323 | 17 | 324 | 2.84e-57 | 188 |
MS.gene71351.t1 | AT5G64100 | 38.284 | 303 | 167 | 9 | 28 | 321 | 40 | 331 | 1.86e-56 | 186 |
MS.gene71351.t1 | AT4G30170 | 37.942 | 311 | 171 | 10 | 23 | 321 | 25 | 325 | 2.54e-56 | 186 |
MS.gene71351.t1 | AT5G64110 | 38.226 | 327 | 182 | 9 | 5 | 321 | 14 | 330 | 9.33e-56 | 184 |
MS.gene71351.t1 | AT1G34510 | 35.275 | 309 | 189 | 8 | 14 | 321 | 11 | 309 | 3.50e-55 | 182 |
MS.gene71351.t1 | AT1G24110 | 35.312 | 320 | 189 | 8 | 14 | 321 | 9 | 322 | 5.75e-55 | 182 |
MS.gene71351.t1 | AT2G39040 | 38.339 | 313 | 173 | 8 | 23 | 321 | 44 | 350 | 1.74e-54 | 181 |
MS.gene71351.t1 | AT4G33870 | 33.234 | 337 | 174 | 8 | 28 | 320 | 71 | 400 | 7.35e-54 | 181 |
MS.gene71351.t1 | AT2G34060 | 36.070 | 341 | 187 | 12 | 3 | 318 | 9 | 343 | 8.96e-54 | 179 |
MS.gene71351.t1 | AT4G37520 | 37.580 | 314 | 172 | 9 | 23 | 321 | 25 | 329 | 1.75e-53 | 178 |
MS.gene71351.t1 | AT5G67400 | 37.160 | 331 | 184 | 10 | 8 | 321 | 6 | 329 | 4.48e-53 | 177 |
MS.gene71351.t1 | AT5G14130 | 35.669 | 314 | 188 | 6 | 16 | 321 | 23 | 330 | 7.93e-53 | 177 |
MS.gene71351.t1 | AT5G14130 | 35.669 | 314 | 188 | 6 | 16 | 321 | 64 | 371 | 1.92e-52 | 177 |
MS.gene71351.t1 | AT4G37520 | 36.943 | 314 | 171 | 9 | 23 | 321 | 25 | 326 | 1.58e-51 | 173 |
MS.gene71351.t1 | AT4G25980 | 33.837 | 331 | 199 | 9 | 2 | 321 | 5 | 326 | 1.10e-50 | 171 |
MS.gene71351.t1 | AT3G49960 | 36.709 | 316 | 176 | 10 | 21 | 321 | 23 | 329 | 3.64e-50 | 170 |
MS.gene71351.t1 | AT1G77100 | 36.280 | 328 | 186 | 12 | 5 | 321 | 4 | 319 | 8.62e-50 | 168 |
MS.gene71351.t1 | AT2G24800 | 34.936 | 312 | 181 | 7 | 22 | 321 | 28 | 329 | 1.07e-49 | 168 |
MS.gene71351.t1 | AT4G37530 | 40.385 | 260 | 135 | 8 | 23 | 268 | 25 | 278 | 1.62e-49 | 167 |
MS.gene71351.t1 | AT4G31760 | 33.333 | 324 | 197 | 7 | 8 | 321 | 12 | 326 | 3.06e-49 | 167 |
MS.gene71351.t1 | AT5G24070 | 34.356 | 326 | 187 | 10 | 11 | 321 | 22 | 335 | 4.59e-48 | 164 |
MS.gene71351.t1 | AT2G43480 | 33.230 | 322 | 189 | 9 | 15 | 321 | 25 | 335 | 9.19e-48 | 164 |
MS.gene71351.t1 | AT2G37130 | 34.667 | 300 | 185 | 7 | 28 | 321 | 2 | 296 | 9.07e-47 | 160 |
MS.gene71351.t1 | AT2G37130 | 34.426 | 305 | 189 | 7 | 23 | 321 | 28 | 327 | 1.36e-46 | 160 |
MS.gene71351.t1 | AT3G17070 | 31.731 | 312 | 188 | 8 | 25 | 321 | 38 | 339 | 3.43e-46 | 159 |
MS.gene71351.t1 | AT4G21960 | 31.579 | 304 | 196 | 6 | 25 | 322 | 31 | 328 | 5.33e-42 | 148 |
MS.gene71351.t1 | AT4G25980 | 39.394 | 198 | 111 | 6 | 2 | 199 | 50 | 238 | 1.80e-37 | 135 |
MS.gene71351.t1 | AT5G39580 | 39.713 | 209 | 114 | 7 | 7 | 215 | 7 | 203 | 4.18e-36 | 130 |
MS.gene71351.t1 | AT3G17070 | 29.225 | 284 | 175 | 9 | 53 | 321 | 4 | 276 | 9.85e-32 | 120 |
MS.gene71351.t1 | AT2G24800 | 40.698 | 172 | 95 | 3 | 22 | 193 | 28 | 192 | 7.73e-31 | 117 |
MS.gene71351.t1 | AT4G32320 | 30.939 | 181 | 101 | 7 | 39 | 211 | 99 | 263 | 6.70e-12 | 65.9 |
Find 56 sgRNAs with CRISPR-Local
Find 98 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATAGAACAACTAAGTCTTTA+AGG | 0.101127 | 5.3:+59361166 | None:intergenic |
CCTCTAATTGAATTGATATT+TGG | 0.121288 | 5.3:+59361677 | None:intergenic |
CAAATTCTGTCATAATAATT+AGG | 0.177639 | 5.3:+59362605 | None:intergenic |
CCAAATATCAATTCAATTAG+AGG | 0.217538 | 5.3:-59361677 | MS.gene71351:CDS |
TTACCATCGCCGCCGATTCT+AGG | 0.235834 | 5.3:+59361036 | None:intergenic |
TTGCAAATTTGCTGCAAAAT+TGG | 0.238319 | 5.3:+59361068 | None:intergenic |
GAAGCCTCTTACCGGGAAAA+AGG | 0.239549 | 5.3:-59360809 | MS.gene71351:CDS |
TATCCTTCTTCATTCATATC+TGG | 0.282510 | 5.3:+59360755 | None:intergenic |
AAAGACTTAGTTGTTCTATC+TGG | 0.291396 | 5.3:-59361162 | MS.gene71351:CDS |
AAATTCTGTCATAATAATTA+GGG | 0.310972 | 5.3:+59362606 | None:intergenic |
AGTTGACACATCCTATTATA+AGG | 0.327439 | 5.3:-59360983 | MS.gene71351:CDS |
GGTAATTTGAAGCCTCTTAC+CGG | 0.347939 | 5.3:-59360817 | MS.gene71351:CDS |
TTTATGATTGGCAATGCCTT+AGG | 0.348231 | 5.3:+59362581 | None:intergenic |
AACATCACGTTTGCAAGCTT+TGG | 0.348583 | 5.3:+59361619 | None:intergenic |
ATACAACAAAGCCTTATAAT+AGG | 0.352068 | 5.3:+59360972 | None:intergenic |
AGTTGGGTGGTAAGCAATAT+TGG | 0.363597 | 5.3:-59361314 | MS.gene71351:CDS |
GTTTCTAAAGTTAGTGCATT+GGG | 0.375039 | 5.3:+59361119 | None:intergenic |
TTAACAATTGACTTTATGAT+TGG | 0.377211 | 5.3:+59362569 | None:intergenic |
CTATCTGGTGGTCACACAAT+TGG | 0.396721 | 5.3:-59361147 | MS.gene71351:CDS |
TGGAGTTTCTATGATTAAGA+TGG | 0.424465 | 5.3:-59360839 | MS.gene71351:CDS |
TACCATCGCCGCCGATTCTA+GGG | 0.440071 | 5.3:+59361037 | None:intergenic |
AGCTGCTATAGCTAAAATAT+CGG | 0.458807 | 5.3:+59361586 | None:intergenic |
TATTGGTACCAAGTGTTACT+AGG | 0.461210 | 5.3:-59361297 | MS.gene71351:CDS |
GGAGTTTCTATGATTAAGAT+GGG | 0.461747 | 5.3:-59360838 | MS.gene71351:CDS |
CTCTTCTTCCTAGTAACACT+TGG | 0.476428 | 5.3:+59361289 | None:intergenic |
TTATGATTGGCAATGCCTTA+GGG | 0.480930 | 5.3:+59362582 | None:intergenic |
TGCAAAATTGGTGTCTATGT+TGG | 0.481455 | 5.3:+59361080 | None:intergenic |
AGTTGTGAGAAGTTGAAGAA+TGG | 0.487622 | 5.3:+59361219 | None:intergenic |
TGCCCTAGAATCGGCGGCGA+TGG | 0.491410 | 5.3:-59361039 | MS.gene71351:CDS |
TGTTTCTAAAGTTAGTGCAT+TGG | 0.508606 | 5.3:+59361118 | None:intergenic |
GACTTAGTTGTTCTATCTGG+TGG | 0.509368 | 5.3:-59361159 | MS.gene71351:CDS |
CAAAAGACATGCCCTAGAAT+CGG | 0.510123 | 5.3:-59361048 | MS.gene71351:CDS |
TCTTCTCACCAACGAAGGTA+GGG | 0.513623 | 5.3:+59361708 | None:intergenic |
TTGCTAGGTGTAGAATCAAA+TGG | 0.520350 | 5.3:+59361006 | None:intergenic |
AAAGCTCTTGATCAGAATGA+AGG | 0.528130 | 5.3:+59360938 | None:intergenic |
GAGAAGTTGAAGAATGGAGG+AGG | 0.530102 | 5.3:+59361225 | None:intergenic |
GAAACTACATAGGGTTGTGA+TGG | 0.535813 | 5.3:-59361752 | MS.gene71351:intron |
TGTGAGAAGTTGAAGAATGG+AGG | 0.539815 | 5.3:+59361222 | None:intergenic |
TAGGATGTGTCAACTTTGCT+AGG | 0.540193 | 5.3:+59360991 | None:intergenic |
GTAATTTGAAGCCTCTTACC+GGG | 0.547800 | 5.3:-59360816 | MS.gene71351:CDS |
TTACGTTAACAAAGCAGTCA+TGG | 0.552379 | 5.3:+59362492 | None:intergenic |
TTCATTAATTAATAGTTGGG+TGG | 0.560408 | 5.3:-59361327 | MS.gene71351:intron |
AATAGTTCGTGAGCCACGCA+TGG | 0.561525 | 5.3:-59362540 | MS.gene71351:CDS |
TTATGACAGAATTTGCCCTA+AGG | 0.567637 | 5.3:-59362597 | MS.gene71351:CDS |
TGGTTCTCAAAGTGATAGAT+TGG | 0.568189 | 5.3:-59360905 | MS.gene71351:CDS |
CTTCTCACCAACGAAGGTAG+GGG | 0.584326 | 5.3:+59361709 | None:intergenic |
GTCTTCTCACCAACGAAGGT+AGG | 0.586647 | 5.3:+59361707 | None:intergenic |
GATGACACCCCTACCTTCGT+TGG | 0.589855 | 5.3:-59361716 | MS.gene71351:CDS |
AAGGCTTTGTTGTATAAACA+AGG | 0.598286 | 5.3:-59360964 | MS.gene71351:CDS |
ATAGTTCGTGAGCCACGCAT+GGG | 0.619809 | 5.3:-59362539 | MS.gene71351:CDS |
AGGGGTGTCATCGAGTAGAA+CGG | 0.620856 | 5.3:+59361727 | None:intergenic |
ATCACAAATTTCAAGTCACA+TGG | 0.624562 | 5.3:-59361195 | MS.gene71351:CDS |
AGCAACGATGCTCCCATGCG+TGG | 0.625399 | 5.3:+59362527 | None:intergenic |
TGCAGTCTTCTCACCAACGA+AGG | 0.642554 | 5.3:+59361703 | None:intergenic |
AAGACATGCCCTAGAATCGG+CGG | 0.670665 | 5.3:-59361045 | MS.gene71351:CDS |
AATTCTGTCATAATAATTAG+GGG | 0.686978 | 5.3:+59362607 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATTCTGTCATAATAATTA+GGG | + | chr5.3:59360848-59360867 | None:intergenic | 15.0% |
!! | AATAATTATGTCAAACAATT+AGG | - | chr5.3:59361393-59361412 | MS.gene71351:intron | 15.0% |
!!! | AATTCATTATTTTTGTAGTT+GGG | - | chr5.3:59361310-59361329 | MS.gene71351:CDS | 15.0% |
!!! | TAATTCATTATTTTTGTAGT+TGG | - | chr5.3:59361309-59361328 | MS.gene71351:CDS | 15.0% |
!!! | TATTTTTTTTTTCGTGAATT+TGG | - | chr5.3:59362061-59362080 | MS.gene71351:intron | 15.0% |
!! | AATTCTGTCATAATAATTAG+GGG | + | chr5.3:59360847-59360866 | None:intergenic | 20.0% |
!! | AGGTATTAGTTATACTATAA+TGG | + | chr5.3:59361670-59361689 | None:intergenic | 20.0% |
!! | CAAATTCTGTCATAATAATT+AGG | + | chr5.3:59360849-59360868 | None:intergenic | 20.0% |
!! | GCATTCATTAATTAATAGTT+GGG | - | chr5.3:59362121-59362140 | MS.gene71351:intron | 20.0% |
!! | GTACTATTCATATTAGATAT+TGG | + | chr5.3:59361340-59361359 | None:intergenic | 20.0% |
!! | TGCATTCATTAATTAATAGT+TGG | - | chr5.3:59362120-59362139 | MS.gene71351:intron | 20.0% |
!!! | TAATTAGAAGTGCAAAATAT+CGG | + | chr5.3:59361919-59361938 | None:intergenic | 20.0% |
!!! | TTAACAATTGACTTTATGAT+TGG | + | chr5.3:59360885-59360904 | None:intergenic | 20.0% |
! | ATAGAACAACTAAGTCTTTA+AGG | + | chr5.3:59362288-59362307 | None:intergenic | 25.0% |
! | CCAAATATCAATTCAATTAG+AGG | - | chr5.3:59361774-59361793 | MS.gene71351:intron | 25.0% |
! | CCTCTAATTGAATTGATATT+TGG | + | chr5.3:59361777-59361796 | None:intergenic | 25.0% |
! | GAACTATATGAAACTACATA+GGG | - | chr5.3:59361690-59361709 | MS.gene71351:CDS | 25.0% |
! | TATGTAGTTTCATATAGTTC+AGG | + | chr5.3:59361690-59361709 | None:intergenic | 25.0% |
! | TGAACTATATGAAACTACAT+AGG | - | chr5.3:59361689-59361708 | MS.gene71351:CDS | 25.0% |
! | TTCATTAATTAATAGTTGGG+TGG | - | chr5.3:59362124-59362143 | MS.gene71351:intron | 25.0% |
! | TTTACTTTACTTAATGACAC+TGG | + | chr5.3:59361018-59361037 | None:intergenic | 25.0% |
! | TTTGCACTTCTAATTAAACA+AGG | - | chr5.3:59361923-59361942 | MS.gene71351:intron | 25.0% |
!! | ATACAACAAAGCCTTATAAT+AGG | + | chr5.3:59362482-59362501 | None:intergenic | 25.0% |
!! | TATGCTTTTGCTTATGATTT+TGG | - | chr5.3:59362592-59362611 | MS.gene71351:CDS | 25.0% |
AAAGACTTAGTTGTTCTATC+TGG | - | chr5.3:59362289-59362308 | MS.gene71351:intron | 30.0% | |
AAGTTTGCAAGAATAGTAGT+TGG | - | chr5.3:59361432-59361451 | MS.gene71351:intron | 30.0% | |
AATATCGGAAACACTTACTA+TGG | + | chr5.3:59361904-59361923 | None:intergenic | 30.0% | |
AGCTGCTATAGCTAAAATAT+CGG | + | chr5.3:59361868-59361887 | None:intergenic | 30.0% | |
AGTTGACACATCCTATTATA+AGG | - | chr5.3:59362468-59362487 | MS.gene71351:intron | 30.0% | |
AGTTTGCAAGAATAGTAGTT+GGG | - | chr5.3:59361433-59361452 | MS.gene71351:intron | 30.0% | |
CGTTATAATTCAAACCTTAG+AGG | - | chr5.3:59361226-59361245 | MS.gene71351:CDS | 30.0% | |
GGAGTTTCTATGATTAAGAT+GGG | - | chr5.3:59362613-59362632 | MS.gene71351:CDS | 30.0% | |
TATAATTCAAACCTTAGAGG+TGG | - | chr5.3:59361229-59361248 | MS.gene71351:CDS | 30.0% | |
TATGTTCCTTTATGAACGTT+GGG | + | chr5.3:59361286-59361305 | None:intergenic | 30.0% | |
TGGAGTTTCTATGATTAAGA+TGG | - | chr5.3:59362612-59362631 | MS.gene71351:CDS | 30.0% | |
TTATATTGCTGCAACAATTG+TGG | + | chr5.3:59361964-59361983 | None:intergenic | 30.0% | |
TTATGTTCCTTTATGAACGT+TGG | + | chr5.3:59361287-59361306 | None:intergenic | 30.0% | |
! | ATCACAAATTTCAAGTCACA+TGG | - | chr5.3:59362256-59362275 | MS.gene71351:intron | 30.0% |
! | CAATTCAATTAGAGGTTTTG+AGG | - | chr5.3:59361782-59361801 | MS.gene71351:intron | 30.0% |
! | TCTGATCAAGAGCTTTTTAA+AGG | - | chr5.3:59362520-59362539 | MS.gene71351:CDS | 30.0% |
!! | AAGGCTTTGTTGTATAAACA+AGG | - | chr5.3:59362487-59362506 | MS.gene71351:intron | 30.0% |
!! | GTTTCTAAAGTTAGTGCATT+GGG | + | chr5.3:59362335-59362354 | None:intergenic | 30.0% |
!! | TATCCAATTTGTGCTTTTTG+TGG | - | chr5.3:59360779-59360798 | MS.gene71351:CDS | 30.0% |
!! | TGTTTCTAAAGTTAGTGCAT+TGG | + | chr5.3:59362336-59362355 | None:intergenic | 30.0% |
!! | TTGCAAATTTGCTGCAAAAT+TGG | + | chr5.3:59362386-59362405 | None:intergenic | 30.0% |
AAACATGAAATCCACCTCTA+AGG | + | chr5.3:59361243-59361262 | None:intergenic | 35.0% | |
AAAGCTCTTGATCAGAATGA+AGG | + | chr5.3:59362516-59362535 | None:intergenic | 35.0% | |
AGTTGTGAGAAGTTGAAGAA+TGG | + | chr5.3:59362235-59362254 | None:intergenic | 35.0% | |
TGGTTCTCAAAGTGATAGAT+TGG | - | chr5.3:59362546-59362565 | MS.gene71351:CDS | 35.0% | |
TTACGTTAACAAAGCAGTCA+TGG | + | chr5.3:59360962-59360981 | None:intergenic | 35.0% | |
TTATGACAGAATTTGCCCTA+AGG | - | chr5.3:59360854-59360873 | MS.gene71351:CDS | 35.0% | |
TTATGATTGGCAATGCCTTA+GGG | + | chr5.3:59360872-59360891 | None:intergenic | 35.0% | |
TTGCTAGGTGTAGAATCAAA+TGG | + | chr5.3:59362448-59362467 | None:intergenic | 35.0% | |
TTTATGATTGGCAATGCCTT+AGG | + | chr5.3:59360873-59360892 | None:intergenic | 35.0% | |
TTTCTTCCCAACGTTCATAA+AGG | - | chr5.3:59361277-59361296 | MS.gene71351:CDS | 35.0% | |
! | TATTGGTACCAAGTGTTACT+AGG | - | chr5.3:59362154-59362173 | MS.gene71351:intron | 35.0% |
! | TGACCACAAAAAGCACAAAT+TGG | + | chr5.3:59360785-59360804 | None:intergenic | 35.0% |
! | TGCAAAATTGGTGTCTATGT+TGG | + | chr5.3:59362374-59362393 | None:intergenic | 35.0% |
!! | CAAGAGCTTTTTAAAGGTGA+TGG | - | chr5.3:59362526-59362545 | MS.gene71351:CDS | 35.0% |
!! | CGAAATTTCAGTTTTGATCG+CGG | + | chr5.3:59362034-59362053 | None:intergenic | 35.0% |
!! | TTTGAGATCAACAGCAGTTT+TGG | - | chr5.3:59361989-59362008 | MS.gene71351:intron | 35.0% |
AACATCACGTTTGCAAGCTT+TGG | + | chr5.3:59361835-59361854 | None:intergenic | 40.0% | |
AGTTGGGTGGTAAGCAATAT+TGG | - | chr5.3:59362137-59362156 | MS.gene71351:intron | 40.0% | |
CAAAAGACATGCCCTAGAAT+CGG | - | chr5.3:59362403-59362422 | MS.gene71351:intron | 40.0% | |
CTCTTCTTCCTAGTAACACT+TGG | + | chr5.3:59362165-59362184 | None:intergenic | 40.0% | |
GAAACTACATAGGGTTGTGA+TGG | - | chr5.3:59361699-59361718 | MS.gene71351:CDS | 40.0% | |
GACTTAGTTGTTCTATCTGG+TGG | - | chr5.3:59362292-59362311 | MS.gene71351:intron | 40.0% | |
TAGGATGTGTCAACTTTGCT+AGG | + | chr5.3:59362463-59362482 | None:intergenic | 40.0% | |
TGTGAGAAGTTGAAGAATGG+AGG | + | chr5.3:59362232-59362251 | None:intergenic | 40.0% | |
! | ATTAGGGGTCAGTTTTGCAA+TGG | + | chr5.3:59360832-59360851 | None:intergenic | 40.0% |
! | GGTAATTTGAAGCCTCTTAC+CGG | - | chr5.3:59362634-59362653 | MS.gene71351:CDS | 40.0% |
! | GTAATTTGAAGCCTCTTACC+GGG | - | chr5.3:59362635-59362654 | MS.gene71351:CDS | 40.0% |
AAGCCTCTTACCGGGAAAAA+GGG | - | chr5.3:59362643-59362662 | MS.gene71351:CDS | 45.0% | |
CTATCTGGTGGTCACACAAT+TGG | - | chr5.3:59362304-59362323 | MS.gene71351:intron | 45.0% | |
GAGAAGTTGAAGAATGGAGG+AGG | + | chr5.3:59362229-59362248 | None:intergenic | 45.0% | |
TCTTCTCACCAACGAAGGTA+GGG | + | chr5.3:59361746-59361765 | None:intergenic | 45.0% | |
!!! | TAATATAGAAATATAAATTT+TGG | + | chr5.3:59361578-59361597 | None:intergenic | 5.0% |
AAGACATGCCCTAGAATCGG+CGG | - | chr5.3:59362406-59362425 | MS.gene71351:intron | 50.0% | |
AATAGTTCGTGAGCCACGCA+TGG | - | chr5.3:59360911-59360930 | MS.gene71351:CDS | 50.0% | |
ATAGTTCGTGAGCCACGCAT+GGG | - | chr5.3:59360912-59360931 | MS.gene71351:CDS | 50.0% | |
CGCATGCAAGTAGCTTGGTT+GGG | + | chr5.3:59361175-59361194 | None:intergenic | 50.0% | |
CTTCTCACCAACGAAGGTAG+GGG | + | chr5.3:59361745-59361764 | None:intergenic | 50.0% | |
GAAGCCTCTTACCGGGAAAA+AGG | - | chr5.3:59362642-59362661 | MS.gene71351:CDS | 50.0% | |
GCATGCAAGTAGCTTGGTTG+GGG | + | chr5.3:59361174-59361193 | None:intergenic | 50.0% | |
GTCTTCTCACCAACGAAGGT+AGG | + | chr5.3:59361747-59361766 | None:intergenic | 50.0% | |
GTTGTCGCATGCAAGTAGCT+TGG | + | chr5.3:59361180-59361199 | None:intergenic | 50.0% | |
TCGCATGCAAGTAGCTTGGT+TGG | + | chr5.3:59361176-59361195 | None:intergenic | 50.0% | |
TGCAGTCTTCTCACCAACGA+AGG | + | chr5.3:59361751-59361770 | None:intergenic | 50.0% | |
! | CCTGATCTCACCCTTTTTCC+CGG | + | chr5.3:59362656-59362675 | None:intergenic | 50.0% |
! | GGGGTCAGTTTTGCAATGGT+AGG | + | chr5.3:59360828-59360847 | None:intergenic | 50.0% |
! | TCACCCTTTTTCCCGGTAAG+AGG | + | chr5.3:59362649-59362668 | None:intergenic | 50.0% |
!! | AGGGGTGTCATCGAGTAGAA+CGG | + | chr5.3:59361727-59361746 | None:intergenic | 50.0% |
CCGGGAAAAAGGGTGAGATC+AGG | - | chr5.3:59362653-59362672 | MS.gene71351:CDS | 55.0% | |
GATGACACCCCTACCTTCGT+TGG | - | chr5.3:59361735-59361754 | MS.gene71351:CDS | 55.0% | |
!! | TACCATCGCCGCCGATTCTA+GGG | + | chr5.3:59362417-59362436 | None:intergenic | 55.0% |
!! | TTACCATCGCCGCCGATTCT+AGG | + | chr5.3:59362418-59362437 | None:intergenic | 55.0% |
AGCAACGATGCTCCCATGCG+TGG | + | chr5.3:59360927-59360946 | None:intergenic | 60.0% | |
TGCCCTAGAATCGGCGGCGA+TGG | - | chr5.3:59362412-59362431 | MS.gene71351:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.3 | gene | 59360768 | 59362705 | 59360768 | ID=MS.gene71351 |
chr5.3 | mRNA | 59360768 | 59362705 | 59360768 | ID=MS.gene71351.t1;Parent=MS.gene71351 |
chr5.3 | exon | 59362496 | 59362705 | 59362496 | ID=MS.gene71351.t1.exon1;Parent=MS.gene71351.t1 |
chr5.3 | CDS | 59362496 | 59362705 | 59362496 | ID=cds.MS.gene71351.t1;Parent=MS.gene71351.t1 |
chr5.3 | exon | 59361568 | 59361762 | 59361568 | ID=MS.gene71351.t1.exon2;Parent=MS.gene71351.t1 |
chr5.3 | CDS | 59361568 | 59361762 | 59361568 | ID=cds.MS.gene71351.t1;Parent=MS.gene71351.t1 |
chr5.3 | exon | 59360768 | 59361334 | 59360768 | ID=MS.gene71351.t1.exon3;Parent=MS.gene71351.t1 |
chr5.3 | CDS | 59360768 | 59361334 | 59360768 | ID=cds.MS.gene71351.t1;Parent=MS.gene71351.t1 |
Gene Sequence |
Protein sequence |