AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene71662

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene71662.t1 MTR_1g107265 97.468 395 10 0 2 396 96 490 0.0 822
MS.gene71662.t1 MTR_1g107265 28.070 171 106 6 82 249 65 221 9.90e-13 70.5
MS.gene71662.t1 MTR_1g107265 97.468 395 10 0 2 396 96 490 0.0 819
MS.gene71662.t1 MTR_1g107265 28.070 171 106 6 82 249 65 221 9.81e-13 70.5
MS.gene71662.t1 MTR_2g069030 31.102 254 148 10 9 259 50 279 2.04e-23 100
MS.gene71662.t1 MTR_2g069030 29.911 224 129 11 8 220 100 306 1.65e-15 77.4
MS.gene71662.t1 MTR_1g084120 26.087 253 155 8 6 255 52 275 3.52e-20 93.2
MS.gene71662.t1 MTR_4g109680 25.703 249 147 10 9 249 55 273 7.83e-17 82.8
MS.gene71662.t1 MTR_4g109680 25.714 245 155 8 11 252 5 225 6.99e-15 77.0
MS.gene71662.t1 MTR_4g109680 33.333 126 72 5 6 128 158 274 1.23e-14 76.3
MS.gene71662.t1 MTR_4g119100 30.374 214 117 10 3 205 117 309 5.92e-16 80.5
MS.gene71662.t1 MTR_4g119100 30.374 214 117 10 3 205 118 310 8.49e-16 79.7
MS.gene71662.t1 MTR_4g119100 30.374 214 117 10 3 205 118 310 9.23e-16 79.7
MS.gene71662.t1 MTR_2g019860 25.073 343 196 14 8 314 115 432 1.96e-15 78.6
MS.gene71662.t1 MTR_4g132120 27.103 214 130 8 8 220 316 504 2.23e-15 78.6
MS.gene71662.t1 MTR_7g113200 25.106 235 135 8 24 249 180 382 2.23e-13 72.4
MS.gene71662.t1 MTR_7g113200 25.792 221 135 9 8 220 213 412 4.94e-12 68.2
MS.gene71662.t1 MTR_1g090740 25.703 249 133 10 19 249 15 229 3.65e-13 71.2
MS.gene71662.t1 MTR_7g113200 25.108 231 132 8 28 249 184 382 6.11e-13 70.5
MS.gene71662.t1 MTR_7g113200 25.792 221 135 9 8 220 213 412 9.19e-12 67.0
MS.gene71662.t1 MTR_1g492850 25.877 228 132 8 8 220 47 252 1.97e-12 68.9
MS.gene71662.t1 MTR_1g089370 27.778 252 153 13 5 247 72 303 2.12e-12 69.3
MS.gene71662.t1 MTR_1g492850 25.877 228 132 8 8 220 47 252 2.47e-12 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene71662.t1 AT5G50310 74.627 402 89 6 2 396 96 491 0.0 578
MS.gene71662.t1 AT3G07720 29.918 244 144 10 9 249 52 271 2.71e-17 82.8
MS.gene71662.t1 AT4G04670 25.743 202 127 5 20 220 314 493 3.08e-16 81.3
MS.gene71662.t1 AT5G18590 32.402 179 98 8 29 205 135 292 1.96e-15 78.6
MS.gene71662.t1 AT5G18590 32.402 179 98 8 29 205 135 292 1.96e-15 78.6
MS.gene71662.t1 AT1G18610 32.283 127 76 4 6 130 158 276 4.90e-14 74.3
MS.gene71662.t1 AT1G18610 32.283 127 76 4 6 130 158 276 4.90e-14 74.3
MS.gene71662.t1 AT2G33070 23.077 273 183 7 9 278 198 446 6.02e-14 73.6
MS.gene71662.t1 AT2G33070 28.718 195 120 8 6 197 246 424 6.42e-11 64.3
MS.gene71662.t1 AT1G74150 24.597 248 151 10 9 249 52 270 6.08e-14 73.9
MS.gene71662.t1 AT1G74150 32.283 127 76 4 6 130 155 273 6.91e-13 70.5
MS.gene71662.t1 AT1G74150 26.108 203 127 8 23 220 14 198 5.36e-12 67.8
MS.gene71662.t1 AT1G74150 24.194 248 152 9 9 249 52 270 6.27e-14 73.9
MS.gene71662.t1 AT1G74150 32.283 127 76 4 6 130 155 273 7.32e-13 70.5
MS.gene71662.t1 AT1G74150 26.108 203 127 8 23 220 14 198 5.48e-12 67.8
MS.gene71662.t1 AT1G74150 24.194 248 152 9 9 249 52 270 6.28e-14 73.9
MS.gene71662.t1 AT1G74150 32.283 127 76 4 6 130 155 273 7.27e-13 70.5
MS.gene71662.t1 AT1G74150 26.108 203 127 8 23 220 14 198 5.74e-12 67.8
MS.gene71662.t1 AT2G33070 23.077 273 183 7 9 278 196 444 6.32e-14 73.6
MS.gene71662.t1 AT2G33070 28.718 195 120 8 6 197 244 422 6.45e-11 64.3
MS.gene71662.t1 AT2G33070 23.077 273 183 7 9 278 196 444 6.32e-14 73.6
MS.gene71662.t1 AT2G33070 28.718 195 120 8 6 197 244 422 6.45e-11 64.3
MS.gene71662.t1 AT3G05420 25.991 227 134 8 7 220 209 414 7.43e-14 73.9
MS.gene71662.t1 AT3G05420 25.991 227 134 8 7 220 210 415 7.57e-14 73.9
MS.gene71662.t1 AT1G74150 24.336 226 140 8 28 249 56 254 9.77e-14 73.2
MS.gene71662.t1 AT1G74150 32.283 127 76 4 6 130 139 257 5.49e-13 70.9
MS.gene71662.t1 AT1G54040 26.087 253 167 8 8 252 45 285 2.29e-13 71.2
MS.gene71662.t1 AT1G54040 26.087 253 167 8 8 252 51 291 2.67e-13 70.9
MS.gene71662.t1 AT5G27630 26.432 227 133 8 7 220 210 415 4.87e-13 71.2
MS.gene71662.t1 AT5G27630 26.432 227 133 8 7 220 210 415 5.24e-13 71.2
MS.gene71662.t1 AT5G27630 26.432 227 133 8 7 220 210 415 5.77e-13 70.9
MS.gene71662.t1 AT5G27630 26.432 227 133 8 7 220 210 415 6.02e-13 70.9
MS.gene71662.t1 AT3G16400 23.443 273 182 7 9 278 195 443 2.81e-12 68.6
MS.gene71662.t1 AT3G16400 23.443 273 182 7 9 278 195 443 2.81e-12 68.6
MS.gene71662.t1 AT3G16410 24.194 248 161 7 9 253 344 567 6.09e-12 67.8
MS.gene71662.t1 AT5G48180 27.049 244 144 11 8 246 49 263 7.28e-12 66.6
MS.gene71662.t1 AT1G54040 26.577 222 145 7 37 252 2 211 3.45e-11 63.5

Find 100 sgRNAs with CRISPR-Local

Find 258 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTTGACCTTGATCAATTTA+AGG 0.143374 1.1:+76879652 MS.gene71662:CDS
TGGGAACAACTTAATTTAAA+AGG 0.179060 1.1:+76878175 MS.gene71662:CDS
TTGTTCTTGAATGAGCTTTA+TGG 0.213686 1.1:+76880823 MS.gene71662:CDS
GTTCTTTCCTTGACTACTTT+TGG 0.260810 1.1:+76881714 MS.gene71662:CDS
TAATCTTTGATGCAATATTC+TGG 0.265820 1.1:-76881344 None:intergenic
AAGAGGAGGGCTCTGCTATT+TGG 0.302506 1.1:+76880420 MS.gene71662:CDS
TGATGGAACCTCTCTTGATT+TGG 0.345284 1.1:-76878004 None:intergenic
CTGCGGGGAGGAGGACTATT+AGG 0.349990 1.1:-76877830 None:intergenic
CCTGGAGCAATGTGGCCAAC+TGG 0.354930 1.1:+76879848 MS.gene71662:CDS
AAGAGATGAAGCTGAGGATA+TGG 0.355774 1.1:+76881290 MS.gene71662:CDS
ATGCCTCCTGGTCCTCGTGC+AGG 0.359177 1.1:+76880378 MS.gene71662:CDS
TATATGCAGACTTTCGTCTA+TGG 0.366544 1.1:+76877755 None:intergenic
GATTCCTTAGACTTTCCTTC+AGG 0.366560 1.1:-76881396 None:intergenic
CTTAGACTTTCCTTCAGGTT+TGG 0.384258 1.1:-76881391 None:intergenic
CTTGTTCCATTCCCAAGTCT+TGG 0.391108 1.1:-76880195 None:intergenic
GGGTGTCCTGGTCCACGTTC+GGG 0.392989 1.1:+76878196 MS.gene71662:CDS
CAAACCTGAAGGAAAGTCTA+AGG 0.399665 1.1:+76881392 MS.gene71662:CDS
TTGTTCCATTCCCAAGTCTT+GGG 0.413147 1.1:-76880194 None:intergenic
TCATCTCTTGCAGTAGATAG+TGG 0.413970 1.1:-76881276 None:intergenic
AGAGATACACTATATATATA+TGG 0.419292 1.1:+76881591 MS.gene71662:CDS
GGCCACATTGCTCCAGGCTT+AGG 0.421712 1.1:-76879842 None:intergenic
ATTCCCAAGTCTTGGGATCA+AGG 0.424658 1.1:-76880187 None:intergenic
TTTCCATGTGTGTTCATAAG+AGG 0.428365 1.1:+76880403 MS.gene71662:CDS
AGGGTGTCCTGGTCCACGTT+CGG 0.432220 1.1:+76878195 MS.gene71662:CDS
CCAGTTGGCCACATTGCTCC+AGG 0.435281 1.1:-76879848 None:intergenic
AACAGCTTGATGAGCACTGC+GGG 0.441731 1.1:-76877846 None:intergenic
GAAGGAAAGTCTAAGGAATC+TGG 0.444652 1.1:+76881399 MS.gene71662:CDS
AATCTTTGATGCAATATTCT+GGG 0.445092 1.1:-76881343 None:intergenic
TGCCTCCTGGTCCTCGTGCA+GGG 0.455126 1.1:+76880379 MS.gene71662:CDS
AATTTACCTTAAATTGATCA+AGG 0.459598 1.1:-76879658 None:intergenic
TGATGAGCACTGCGGGGAGG+AGG 0.462419 1.1:-76877839 None:intergenic
GGGAACAACTTAATTTAAAA+GGG 0.462637 1.1:+76878176 MS.gene71662:CDS
TCGATATGATGTTGAGAAGC+TGG 0.469863 1.1:+76877787 MS.gene71662:CDS
CGATGTCCCGAACGTGGACC+AGG 0.482739 1.1:-76878202 None:intergenic
GTGCTCATCAAGCTGTTGCT+TGG 0.482807 1.1:+76877852 MS.gene71662:CDS
ATCTCTTCCAACAGCCATGC+AGG 0.483354 1.1:-76881574 None:intergenic
ACCTTAGCAAACTTGATGAA+TGG 0.486761 1.1:+76881670 MS.gene71662:CDS
CTTAATTTAAAAGGGTGTCC+TGG 0.493693 1.1:+76878184 MS.gene71662:CDS
GCAGGAATTAATGCGTCCAC+AGG 0.496059 1.1:-76881556 None:intergenic
CTGGAGCAATGTGGCCAACT+GGG 0.504537 1.1:+76879849 MS.gene71662:CDS
CAGATTTAACCTTGTAGTGA+TGG 0.505260 1.1:-76878021 None:intergenic
TCCATTCATCAAGTTTGCTA+AGG 0.506196 1.1:-76881671 None:intergenic
GGTCCCTTGATCCCAAGACT+TGG 0.508965 1.1:+76880183 MS.gene71662:CDS
GACAAGAATGCCTCTGAGAA+AGG 0.512410 1.1:+76880140 MS.gene71662:CDS
TCTGCTATTTGGTGGTGTTG+TGG 0.514556 1.1:+76880431 MS.gene71662:CDS
AGGAGGGCTCTGCTATTTGG+TGG 0.519472 1.1:+76880423 MS.gene71662:CDS
TGAATGGAAGTGCATTATAC+CGG 0.521369 1.1:+76881686 MS.gene71662:CDS
AAGAAGAGTGGGATGCCTCC+TGG 0.521741 1.1:+76880366 MS.gene71662:CDS
GTCAAGGAAAGAACACAAAC+CGG 0.523986 1.1:-76881705 None:intergenic
GAAAACCCTGCACGAGGACC+AGG 0.526655 1.1:-76880384 None:intergenic
CCATGTGTGTTCATAAGAGG+AGG 0.533379 1.1:+76880406 MS.gene71662:CDS
CTGGTCCACGTTCGGGACAT+CGG 0.535631 1.1:+76878203 MS.gene71662:CDS
GGATAAATCAACAAAAGATA+AGG 0.537288 1.1:+76881100 MS.gene71662:CDS
TTCAGTTAGACACCAATCGC+TGG 0.538855 1.1:+76880848 MS.gene71662:CDS
ATTAATTCCTGCATGGCTGT+TGG 0.539010 1.1:+76881567 MS.gene71662:CDS
GAATTGTTCATTCAGATATG+TGG 0.539563 1.1:+76880162 MS.gene71662:CDS
CAAGAAATAAAGCCTAAGCC+TGG 0.543576 1.1:+76879830 MS.gene71662:CDS
GTACCCTCTGGAGTTAAGAA+AGG 0.548785 1.1:+76881079 MS.gene71662:CDS
CTTGGTAGGTTAAGAAGAGT+GGG 0.551093 1.1:+76880355 MS.gene71662:intron
TCTTGGTAGGTTAAGAAGAG+TGG 0.551525 1.1:+76880354 MS.gene71662:intron
TTTGTGAAATAGGTACCCTC+TGG 0.553079 1.1:+76881067 MS.gene71662:intron
TTCCCAAGTCTTGGGATCAA+GGG 0.555002 1.1:-76880186 None:intergenic
ATATATATATGGTGGCATGA+TGG 0.561842 1.1:+76881602 MS.gene71662:CDS
AAGTGTTTCATTGTCAGCAA+TGG 0.562261 1.1:-76881367 None:intergenic
TATCCTTTCTTAACTCCAGA+GGG 0.568713 1.1:-76881082 None:intergenic
AATCTAAACTTACCAGCGAT+TGG 0.570438 1.1:-76880860 None:intergenic
GTCCCTTGATCCCAAGACTT+GGG 0.570914 1.1:+76880184 MS.gene71662:CDS
CAAGACTTGGGAATGGAACA+AGG 0.575951 1.1:+76880196 MS.gene71662:CDS
TACTAACGATGTCGACAAGA+AGG 0.579404 1.1:+76881248 MS.gene71662:CDS
CTATCAGCCAAAAGTAGTCA+AGG 0.581036 1.1:-76881721 None:intergenic
CATTCAAAATTCTTTGCCCG+AGG 0.582771 1.1:+76881434 MS.gene71662:CDS
TTGATCCCAAGACTTGGGAA+TGG 0.585173 1.1:+76880189 MS.gene71662:CDS
TTATCCTTTCTTAACTCCAG+AGG 0.586418 1.1:-76881083 None:intergenic
TCCACGTTCGGGACATCGGA+TGG 0.605166 1.1:+76878207 MS.gene71662:CDS
ATGATACACTTAGAGAAGTG+AGG 0.607586 1.1:+76878775 MS.gene71662:CDS
CTATTCAAAAGAAGTTTCAT+CGG 0.608107 1.1:+76880118 MS.gene71662:CDS
TGGACGCATTAATTCCTGCA+TGG 0.609998 1.1:+76881560 MS.gene71662:CDS
AGAGAGGTTCCATCACTACA+AGG 0.611220 1.1:+76878012 MS.gene71662:CDS
TGAAAACCACTACGCCCAGT+TGG 0.612932 1.1:-76879863 None:intergenic
CATGTGTGTTCATAAGAGGA+GGG 0.619549 1.1:+76880407 MS.gene71662:CDS
ATGTGGCCAACTGGGCGTAG+TGG 0.621719 1.1:+76879857 MS.gene71662:CDS
CCTCCTCTTATGAACACACA+TGG 0.626591 1.1:-76880406 None:intergenic
GTTGTGGATATAGAAGTTGA+AGG 0.627219 1.1:+76880447 MS.gene71662:CDS
ACCATCCGATGTCCCGAACG+TGG 0.627885 1.1:-76878208 None:intergenic
TACTGCAAGAGATGAAGCTG+AGG 0.628207 1.1:+76881284 MS.gene71662:CDS
GAAACACTTACCAAACCTGA+AGG 0.628495 1.1:+76881381 MS.gene71662:CDS
TGGACCTGAAAACTAATCAG+TGG 0.633743 1.1:+76878155 MS.gene71662:CDS
GGACCTGAAAACTAATCAGT+GGG 0.635849 1.1:+76878156 MS.gene71662:CDS
TTACATCTCCAAATCAAGAG+AGG 0.638987 1.1:+76877996 MS.gene71662:CDS
CAGGAATTAATGCGTCCACA+GGG 0.639638 1.1:-76881555 None:intergenic
CACATGGAAAACCCTGCACG+AGG 0.650088 1.1:-76880390 None:intergenic
ATGATGTTGAGAAGCTGGAG+TGG 0.650953 1.1:+76877792 MS.gene71662:CDS
GCTTGATGAGCACTGCGGGG+AGG 0.652275 1.1:-76877842 None:intergenic
GATACACTATATATATATGG+TGG 0.661154 1.1:+76881594 MS.gene71662:CDS
AACCCTGCACGAGGACCAGG+AGG 0.671017 1.1:-76880381 None:intergenic
ATGAACAATTCCTTTCTCAG+AGG 0.672557 1.1:-76880150 None:intergenic
CAACAGCTTGATGAGCACTG+CGG 0.679746 1.1:-76877847 None:intergenic
TTCTAGGCAGTGAAACCCTG+TGG 0.688866 1.1:+76881540 MS.gene71662:intron
ACAGCTTGATGAGCACTGCG+GGG 0.699986 1.1:-76877845 None:intergenic
AGCCTAAGCCTGGAGCAATG+TGG 0.720894 1.1:+76879840 MS.gene71662:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAGAAAGAAAAAAAT+TGG - chr1.1:76881156-76881175 None:intergenic 10.0%
!! AAAATAATCATGAAAATAAA+AGG - chr1.1:76880476-76880495 None:intergenic 10.0%
!! AACTATTAAATAATAACATA+CGG - chr1.1:76880304-76880323 None:intergenic 10.0%
!!! AAGAATTATGTTTATATTTT+TGG + chr1.1:76877875-76877894 MS.gene71662:CDS 10.0%
!! AAGAAATTATTATAACTGAA+CGG + chr1.1:76878672-76878691 MS.gene71662:intron 15.0%
!! AATTAATGAAAAAATTACGA+AGG - chr1.1:76880959-76880978 None:intergenic 15.0%
!! ATTGTTTGTAAACATTAAAA+AGG - chr1.1:76880579-76880598 None:intergenic 15.0%
!! TACACTTATAATTAAATGAA+CGG + chr1.1:76880523-76880542 MS.gene71662:intron 15.0%
!! TCAATCATTATGATTAATTA+GGG + chr1.1:76880012-76880031 MS.gene71662:intron 15.0%
!! TTCAATCATTATGATTAATT+AGG + chr1.1:76880011-76880030 MS.gene71662:intron 15.0%
!!! ATATTTTTGGTAATTTGATT+TGG + chr1.1:76877888-76877907 MS.gene71662:intron 15.0%
!!! TAAATAACTTTAATTTCTGT+AGG - chr1.1:76879123-76879142 None:intergenic 15.0%
!! AAATACAACTACAAACTATA+AGG - chr1.1:76879085-76879104 None:intergenic 20.0%
!! AATTTACCTTAAATTGATCA+AGG - chr1.1:76879661-76879680 None:intergenic 20.0%
!! ACACTTATAATTAAATGAAC+GGG + chr1.1:76880524-76880543 MS.gene71662:intron 20.0%
!! AGAACAGAAAGAAATAAAAT+CGG - chr1.1:76879419-76879438 None:intergenic 20.0%
!! AGAGATACACTATATATATA+TGG + chr1.1:76881591-76881610 MS.gene71662:CDS 20.0%
!! AGTAGTACATTAACATAATT+AGG - chr1.1:76879706-76879725 None:intergenic 20.0%
!! GGAAGAATTTATTACATAAA+TGG - chr1.1:76880917-76880936 None:intergenic 20.0%
!! TAAATGGAAACTTAAGAAAA+TGG - chr1.1:76880901-76880920 None:intergenic 20.0%
!! TAGGAGAAATTAAATTTATC+AGG - chr1.1:76879307-76879326 None:intergenic 20.0%
!!! AAAAATTAGCTTCATATAAG+GGG - chr1.1:76879928-76879947 None:intergenic 20.0%
!!! ACAAAAATTAGCTTCATATA+AGG - chr1.1:76879930-76879949 None:intergenic 20.0%
!!! CAAAAATTAGCTTCATATAA+GGG - chr1.1:76879929-76879948 None:intergenic 20.0%
!!! GTTTTTTTTTAATGTGCTTT+AGG + chr1.1:76877965-76877984 MS.gene71662:intron 20.0%
!!! TTATAGTTTGTAGTTGTATT+TGG + chr1.1:76879084-76879103 MS.gene71662:intron 20.0%
!!! TTGTTGTTTAAATTCTGATA+TGG - chr1.1:76878652-76878671 None:intergenic 20.0%
! AAAAGAATTTAATCAGACTG+CGG - chr1.1:76880715-76880734 None:intergenic 25.0%
! AAATGATTAAAAGTAGTGAG+AGG + chr1.1:76879242-76879261 MS.gene71662:intron 25.0%
! AAGAAAATAACCAAGATAGA+GGG - chr1.1:76878471-76878490 None:intergenic 25.0%
! AATCTTTGATGCAATATTCT+GGG - chr1.1:76881346-76881365 None:intergenic 25.0%
! AATGATTAAAAGTAGTGAGA+GGG + chr1.1:76879243-76879262 MS.gene71662:intron 25.0%
! AATTAAGAAGTGACATAGAA+AGG - chr1.1:76879601-76879620 None:intergenic 25.0%
! ATCATTATGATTAATTAGGG+TGG + chr1.1:76880015-76880034 MS.gene71662:intron 25.0%
! ATCTAGTTGCAAAATCTATA+CGG - chr1.1:76879495-76879514 None:intergenic 25.0%
! ATTTGACCTTGATCAATTTA+AGG + chr1.1:76879652-76879671 MS.gene71662:CDS 25.0%
! ATTTGTATATTCCTCTTCTT+AGG + chr1.1:76880247-76880266 MS.gene71662:intron 25.0%
! CAATCACACACAAAAAAATA+TGG - chr1.1:76879011-76879030 None:intergenic 25.0%
! CTATTCAAAAGAAGTTTCAT+CGG + chr1.1:76880118-76880137 MS.gene71662:CDS 25.0%
! GAAATAAAATCGGATTGAAA+AGG - chr1.1:76879409-76879428 None:intergenic 25.0%
! GATACACTATATATATATGG+TGG + chr1.1:76881594-76881613 MS.gene71662:CDS 25.0%
! GGATAAATCAACAAAAGATA+AGG + chr1.1:76881100-76881119 MS.gene71662:CDS 25.0%
! GGGAACAACTTAATTTAAAA+GGG + chr1.1:76878176-76878195 MS.gene71662:CDS 25.0%
! TAATCTTTGATGCAATATTC+TGG - chr1.1:76881347-76881366 None:intergenic 25.0%
! TATAATACCTGCAAATGATA+AGG - chr1.1:76878723-76878742 None:intergenic 25.0%
! TGGGAACAACTTAATTTAAA+AGG + chr1.1:76878175-76878194 MS.gene71662:CDS 25.0%
! TTCATACATCTTAAGTCAAA+CGG + chr1.1:76878293-76878312 MS.gene71662:intron 25.0%
! TTGACTTAAGATGTATGAAT+CGG - chr1.1:76878292-76878311 None:intergenic 25.0%
!! AAGCACAAGATTATTCTTTT+TGG + chr1.1:76878744-76878763 MS.gene71662:CDS 25.0%
!! AATAACATACGGTATTTTTC+TGG - chr1.1:76880293-76880312 None:intergenic 25.0%
!! ACATTGCAGATTTTCTTATA+TGG + chr1.1:76880092-76880111 MS.gene71662:intron 25.0%
!! ATAACATACGGTATTTTTCT+GGG - chr1.1:76880292-76880311 None:intergenic 25.0%
!! ATCGTTAGTACAATTTTGTT+CGG - chr1.1:76881238-76881257 None:intergenic 25.0%
!! CAGTCTGATTAAATTCTTTT+CGG + chr1.1:76880715-76880734 MS.gene71662:intron 25.0%
!! TAAATTCTGATATGGCTTTA+CGG - chr1.1:76878644-76878663 None:intergenic 25.0%
!! TTTCTATGTCACTTCTTAAT+TGG + chr1.1:76879600-76879619 MS.gene71662:intron 25.0%
!!! ATTTCTAAGTTTTGGTTTTG+AGG + chr1.1:76878957-76878976 MS.gene71662:intron 25.0%
!!! CAACATTGATTTCTAAGTTT+TGG + chr1.1:76878949-76878968 MS.gene71662:intron 25.0%
!!! CAATATGAGATTTTAAGTTG+CGG + chr1.1:76879169-76879188 MS.gene71662:intron 25.0%
!!! TGGTGATGTTTTTAACTTTT+GGG - chr1.1:76878508-76878527 None:intergenic 25.0%
!!! TTTCTAAGTTTTGGTTTTGA+GGG + chr1.1:76878958-76878977 MS.gene71662:intron 25.0%
!!! TTTTTTTAATGTGCTTTAGG+TGG + chr1.1:76877968-76877987 MS.gene71662:intron 25.0%
AAAATGTGGTTCACTTTACT+GGG + chr1.1:76878075-76878094 MS.gene71662:intron 30.0%
AGTTGTGCTCTCATATTAAA+CGG + chr1.1:76881017-76881036 MS.gene71662:intron 30.0%
AGTTTGTAGTTGTATTTGGA+TGG + chr1.1:76879088-76879107 MS.gene71662:intron 30.0%
ATAAGTGTATGCAGATTAGA+TGG - chr1.1:76880512-76880531 None:intergenic 30.0%
ATATATATATGGTGGCATGA+TGG + chr1.1:76881602-76881621 MS.gene71662:CDS 30.0%
ATGTCGTAAAGAATAATCTG+AGG - chr1.1:76878402-76878421 None:intergenic 30.0%
CTAATATCCTTATCATTTGC+AGG + chr1.1:76878713-76878732 MS.gene71662:intron 30.0%
GAAGAAAATAACCAAGATAG+AGG - chr1.1:76878472-76878491 None:intergenic 30.0%
GAATTGTTCATTCAGATATG+TGG + chr1.1:76880162-76880181 MS.gene71662:CDS 30.0%
GATTGAAAATAATCCAACGA+GGG - chr1.1:76879063-76879082 None:intergenic 30.0%
GCAGTCTGATTAAATTCTTT+CGG + chr1.1:76880610-76880629 MS.gene71662:intron 30.0%
TAATTGCACTTAAATCATGC+AGG + chr1.1:76880784-76880803 MS.gene71662:intron 30.0%
TACAACTAGAGACTGATTAT+CGG + chr1.1:76879557-76879576 MS.gene71662:intron 30.0%
TCATACATCTTAAGTCAAAC+GGG + chr1.1:76878294-76878313 MS.gene71662:intron 30.0%
TCTAGTTGTATGTGGTTTAA+AGG - chr1.1:76879547-76879566 None:intergenic 30.0%
TGAATTTCTCCAAACTTTCT+AGG + chr1.1:76881524-76881543 MS.gene71662:intron 30.0%
TTCGGAGGAATTAAATGAAT+GGG + chr1.1:76880628-76880647 MS.gene71662:intron 30.0%
TTGATATTTGTGTGGATTTG+TGG + chr1.1:76877918-76877937 MS.gene71662:intron 30.0%
TTGTTCTTGAATGAGCTTTA+TGG + chr1.1:76880823-76880842 MS.gene71662:CDS 30.0%
TTTCACACATGAGAGTTAAA+TGG + chr1.1:76879518-76879537 MS.gene71662:intron 30.0%
TTTCGGAGGAATTAAATGAA+TGG + chr1.1:76880627-76880646 MS.gene71662:intron 30.0%
! ATTGATGCTGTTTGTGAAAT+AGG + chr1.1:76881057-76881076 MS.gene71662:intron 30.0%
! ATTTCTTGCAATAACGGAAT+AGG - chr1.1:76879326-76879345 None:intergenic 30.0%
! CACAAGATTATTCTTTTTGG+TGG + chr1.1:76878747-76878766 MS.gene71662:CDS 30.0%
! GTATTTTACTCACATCATCT+TGG - chr1.1:76879901-76879920 None:intergenic 30.0%
! GTTTTGTCTTGATATTTGTG+TGG + chr1.1:76877910-76877929 MS.gene71662:intron 30.0%
! TAACATACGGTATTTTTCTG+GGG - chr1.1:76880291-76880310 None:intergenic 30.0%
! TCTGATTAAATTCTTTTCGG+AGG + chr1.1:76880718-76880737 MS.gene71662:intron 30.0%
! TTGCAGATTTTCTTATATGG+TGG + chr1.1:76880095-76880114 MS.gene71662:intron 30.0%
! TTTTCTTTGTGCATCTTCTT+TGG + chr1.1:76878895-76878914 MS.gene71662:intron 30.0%
!! AAAGTTGGTAACTAACTACA+TGG - chr1.1:76878256-76878275 None:intergenic 30.0%
!! ATCTGATGAAAAACTTGCTA+TGG + chr1.1:76878852-76878871 MS.gene71662:intron 30.0%
!! ATTTGTTTATGCTTGCTGTA+TGG + chr1.1:76880751-76880770 MS.gene71662:intron 30.0%
!! TAAGCTTTTGTGTTTCTAAC+AGG - chr1.1:76878561-76878580 None:intergenic 30.0%
!! TTTTGAATTTTGATCGCTGT+AGG + chr1.1:76878120-76878139 MS.gene71662:intron 30.0%
!!! GTGGTGATGTTTTTAACTTT+TGG - chr1.1:76878509-76878528 None:intergenic 30.0%
AACAATCTTAGTGATGACAC+TGG + chr1.1:76881472-76881491 MS.gene71662:intron 35.0%
AAGTGTTTCATTGTCAGCAA+TGG - chr1.1:76881370-76881389 None:intergenic 35.0%
AATCAGTCTCTAGTTGTATG+TGG - chr1.1:76879555-76879574 None:intergenic 35.0%
AATCTAAACTTACCAGCGAT+TGG - chr1.1:76880863-76880882 None:intergenic 35.0%
ACCTTAGCAAACTTGATGAA+TGG + chr1.1:76881670-76881689 MS.gene71662:CDS 35.0%
ACTGCAAAACCCATTTCATT+AGG - chr1.1:76881206-76881225 None:intergenic 35.0%
AGCGAGCATGATATGAATAA+GGG + chr1.1:76879145-76879164 MS.gene71662:intron 35.0%
AGTGTCATCACTAAGATTGT+TGG - chr1.1:76881473-76881492 None:intergenic 35.0%
ATAATGATTGAAACGACACG+TGG - chr1.1:76880003-76880022 None:intergenic 35.0%
ATGAACAATTCCTTTCTCAG+AGG - chr1.1:76880153-76880172 None:intergenic 35.0%
ATGATACACTTAGAGAAGTG+AGG + chr1.1:76878775-76878794 MS.gene71662:CDS 35.0%
ATTAAAAGTAGTGAGAGGGA+GGG + chr1.1:76879247-76879266 MS.gene71662:intron 35.0%
CAGATTTAACCTTGTAGTGA+TGG - chr1.1:76878024-76878043 None:intergenic 35.0%
CATAAGCAAAACTCAAACGT+CGG + chr1.1:76879734-76879753 MS.gene71662:intron 35.0%
CGTGGAATTTCTTGCAATAA+CGG - chr1.1:76879332-76879351 None:intergenic 35.0%
GAAAATGTGGTTCACTTTAC+TGG + chr1.1:76878074-76878093 MS.gene71662:intron 35.0%
GCACGACATTTATGTTTGAA+TGG + chr1.1:76879036-76879055 MS.gene71662:intron 35.0%
GGATATTCTTGCAAGAAAGT+TGG - chr1.1:76878271-76878290 None:intergenic 35.0%
GGATTGAAAATAATCCAACG+AGG - chr1.1:76879064-76879083 None:intergenic 35.0%
GTCTGATTAAATTCTTTCGG+AGG + chr1.1:76880613-76880632 MS.gene71662:intron 35.0%
GTTGTGGATATAGAAGTTGA+AGG + chr1.1:76880447-76880466 MS.gene71662:CDS 35.0%
GTTGTTAGTGAATGTTAGCT+TGG + chr1.1:76878926-76878945 MS.gene71662:intron 35.0%
GTTTGTGGTTAAGGAAAATG+TGG + chr1.1:76878061-76878080 MS.gene71662:intron 35.0%
TAATGATTGAAACGACACGT+GGG - chr1.1:76880002-76880021 None:intergenic 35.0%
TAGCGAGCATGATATGAATA+AGG + chr1.1:76879144-76879163 MS.gene71662:intron 35.0%
TATCCTTTCTTAACTCCAGA+GGG - chr1.1:76881085-76881104 None:intergenic 35.0%
TCTTCTTAACCTACCAAGAA+GGG - chr1.1:76880353-76880372 None:intergenic 35.0%
TTACATCTCCAAATCAAGAG+AGG + chr1.1:76877996-76878015 MS.gene71662:CDS 35.0%
TTATCCTTTCTTAACTCCAG+AGG - chr1.1:76881086-76881105 None:intergenic 35.0%
TTGGTTCAAAATGCAAACCT+CGG - chr1.1:76881454-76881473 None:intergenic 35.0%
TTGTATTTGGATGGTTGTGT+TGG + chr1.1:76879097-76879116 MS.gene71662:intron 35.0%
TTTCCATGTGTGTTCATAAG+AGG + chr1.1:76880403-76880422 MS.gene71662:CDS 35.0%
! AACATACGGTATTTTTCTGG+GGG - chr1.1:76880290-76880309 None:intergenic 35.0%
! AGTTTTGCTGCCTAATGAAA+TGG + chr1.1:76881193-76881212 MS.gene71662:intron 35.0%
! GTGGTTTGGAGTTTAGTATT+TGG + chr1.1:76880221-76880240 MS.gene71662:intron 35.0%
! GTTCTTTCCTTGACTACTTT+TGG + chr1.1:76881714-76881733 MS.gene71662:CDS 35.0%
! GTTTTGCTGCCTAATGAAAT+GGG + chr1.1:76881194-76881213 MS.gene71662:intron 35.0%
! TGAATGGAAGTGCATTATAC+CGG + chr1.1:76881686-76881705 MS.gene71662:CDS 35.0%
! TGACTCTGGAGATAGAAATA+TGG + chr1.1:76879363-76879382 MS.gene71662:intron 35.0%
! TTTGATCGCTGTAGGATTTT+TGG + chr1.1:76878128-76878147 MS.gene71662:intron 35.0%
!! CTTAATTTAAAAGGGTGTCC+TGG + chr1.1:76878184-76878203 MS.gene71662:CDS 35.0%
!! TCCATTCATCAAGTTTGCTA+AGG - chr1.1:76881674-76881693 None:intergenic 35.0%
!! TCTTAAGTCAAACGGGTTTT+CGG + chr1.1:76878301-76878320 MS.gene71662:intron 35.0%
!!! CACTTCTTAATTGGTTTTGC+AGG + chr1.1:76879609-76879628 MS.gene71662:intron 35.0%
!!! TAAGTTTTGGTTTTGAGGGA+TGG + chr1.1:76878962-76878981 MS.gene71662:intron 35.0%
AACATTCCTTTCTCCCTTCT+TGG + chr1.1:76880337-76880356 MS.gene71662:intron 40.0%
AAGAGATGAAGCTGAGGATA+TGG + chr1.1:76881290-76881309 MS.gene71662:CDS 40.0%
AATGGAACAAGGTTGTGGTT+TGG + chr1.1:76880207-76880226 MS.gene71662:intron 40.0%
ACGATCAATGTTCTTGACTC+TGG + chr1.1:76879349-76879368 MS.gene71662:intron 40.0%
ACTGCAGCACAAAATCAGAT+TGG - chr1.1:76879808-76879827 None:intergenic 40.0%
AGAGTCAAGAACATTGATCG+TGG - chr1.1:76879350-76879369 None:intergenic 40.0%
ATCACAGATTCCCTCTATCT+TGG + chr1.1:76878458-76878477 MS.gene71662:intron 40.0%
ATTAATTCCTGCATGGCTGT+TGG + chr1.1:76881567-76881586 MS.gene71662:CDS 40.0%
CAAACCTGAAGGAAAGTCTA+AGG + chr1.1:76881392-76881411 MS.gene71662:CDS 40.0%
CAAGAAATAAAGCCTAAGCC+TGG + chr1.1:76879830-76879849 MS.gene71662:CDS 40.0%
CACACATGAGAGTTAAATGG+AGG + chr1.1:76879521-76879540 MS.gene71662:intron 40.0%
CATGTGTGTTCATAAGAGGA+GGG + chr1.1:76880407-76880426 MS.gene71662:CDS 40.0%
CATTCAAAATTCTTTGCCCG+AGG + chr1.1:76881434-76881453 MS.gene71662:CDS 40.0%
CTCTCATATTAAACGGTTCG+TGG + chr1.1:76881024-76881043 MS.gene71662:intron 40.0%
CTCTTCTTAACCTACCAAGA+AGG - chr1.1:76880354-76880373 None:intergenic 40.0%
CTTGGTAGGTTAAGAAGAGT+GGG + chr1.1:76880355-76880374 MS.gene71662:intron 40.0%
CTTTACGGAATTCTCAGAGA+TGG - chr1.1:76878629-76878648 None:intergenic 40.0%
GAAACACTTACCAAACCTGA+AGG + chr1.1:76881381-76881400 MS.gene71662:CDS 40.0%
GAAGGAAAGTCTAAGGAATC+TGG + chr1.1:76881399-76881418 MS.gene71662:CDS 40.0%
GATTAAAAGTAGTGAGAGGG+AGG + chr1.1:76879246-76879265 MS.gene71662:intron 40.0%
GATTCCTTAGACTTTCCTTC+AGG - chr1.1:76881399-76881418 None:intergenic 40.0%
GGACCTGAAAACTAATCAGT+GGG + chr1.1:76878156-76878175 MS.gene71662:CDS 40.0%
GTCAAGGAAAGAACACAAAC+CGG - chr1.1:76881708-76881727 None:intergenic 40.0%
GTTTCACTGCCTAGAAAGTT+TGG - chr1.1:76881536-76881555 None:intergenic 40.0%
TACTAACGATGTCGACAAGA+AGG + chr1.1:76881248-76881267 MS.gene71662:CDS 40.0%
TCATCTCTTGCAGTAGATAG+TGG - chr1.1:76881279-76881298 None:intergenic 40.0%
TCGATATGATGTTGAGAAGC+TGG + chr1.1:76877787-76877806 MS.gene71662:CDS 40.0%
TCTTGGTAGGTTAAGAAGAG+TGG + chr1.1:76880354-76880373 MS.gene71662:intron 40.0%
TGATGGAACCTCTCTTGATT+TGG - chr1.1:76878007-76878026 None:intergenic 40.0%
TGGACCTGAAAACTAATCAG+TGG + chr1.1:76878155-76878174 MS.gene71662:CDS 40.0%
TGGTTCAAAATGCAAACCTC+GGG - chr1.1:76881453-76881472 None:intergenic 40.0%
TGTTATGCTCTCAAAACGTG+TGG - chr1.1:76878528-76878547 None:intergenic 40.0%
TTGTTCCATTCCCAAGTCTT+GGG - chr1.1:76880197-76880216 None:intergenic 40.0%
TTTGTGAAATAGGTACCCTC+TGG + chr1.1:76881067-76881086 MS.gene71662:intron 40.0%
! AATCTGATTTTGTGCTGCAG+TGG + chr1.1:76879807-76879826 MS.gene71662:intron 40.0%
! CTTAGACTTTCCTTCAGGTT+TGG - chr1.1:76881394-76881413 None:intergenic 40.0%
! GCAAGTTTTTCATCAGATGC+AGG - chr1.1:76878850-76878869 None:intergenic 40.0%
! TCTCTTTTATGTTTCGCACG+AGG + chr1.1:76879436-76879455 MS.gene71662:intron 40.0%
! TTGAGCTTTTCTGCATATGC+TGG + chr1.1:76880985-76881004 MS.gene71662:intron 40.0%
!! CGACGTTTGAGTTTTGCTTA+TGG - chr1.1:76879736-76879755 None:intergenic 40.0%
!! GCTGTAGGATTTTTGGATGT+TGG + chr1.1:76878135-76878154 MS.gene71662:intron 40.0%
!! GTTTATGCTTGCTGTATGGT+TGG + chr1.1:76880755-76880774 MS.gene71662:intron 40.0%
!!! AGATTTTAAGTTGCGGCAAG+TGG + chr1.1:76879176-76879195 MS.gene71662:intron 40.0%
!!! GTTCCCACTGATTAGTTTTC+AGG - chr1.1:76878162-76878181 None:intergenic 40.0%
!!! TTTGGTTTTGAGGGATGGAA+TGG + chr1.1:76878967-76878986 MS.gene71662:intron 40.0%
AACCTACCAAGAAGGGAGAA+AGG - chr1.1:76880346-76880365 None:intergenic 45.0%
AGAGAGGTTCCATCACTACA+AGG + chr1.1:76878012-76878031 MS.gene71662:CDS 45.0%
AGAGGGAATCTGTGATTGTC+AGG - chr1.1:76878454-76878473 None:intergenic 45.0%
ATGATGTTGAGAAGCTGGAG+TGG + chr1.1:76877792-76877811 MS.gene71662:CDS 45.0%
ATGTTTGAATGGACCCTCGT+TGG + chr1.1:76879047-76879066 MS.gene71662:intron 45.0%
ATTCCCAAGTCTTGGGATCA+AGG - chr1.1:76880190-76880209 None:intergenic 45.0%
CAAGACTTGGGAATGGAACA+AGG + chr1.1:76880196-76880215 MS.gene71662:CDS 45.0%
CAGGAATTAATGCGTCCACA+GGG - chr1.1:76881558-76881577 None:intergenic 45.0%
CCATGTGTGTTCATAAGAGG+AGG + chr1.1:76880406-76880425 MS.gene71662:CDS 45.0%
CCTCCTCTTATGAACACACA+TGG - chr1.1:76880409-76880428 None:intergenic 45.0%
CTTGTTCCATTCCCAAGTCT+TGG - chr1.1:76880198-76880217 None:intergenic 45.0%
TACTGCAAGAGATGAAGCTG+AGG + chr1.1:76881284-76881303 MS.gene71662:CDS 45.0%
TGCACAAGATCTCATCAGTG+AGG + chr1.1:76880553-76880572 MS.gene71662:intron 45.0%
TGCGCTTCTGTTTGTGGTTA+AGG + chr1.1:76878052-76878071 MS.gene71662:intron 45.0%
TGCGGCAAGTGGAATAAAGA+AGG + chr1.1:76879187-76879206 MS.gene71662:intron 45.0%
TGGACGCATTAATTCCTGCA+TGG + chr1.1:76881560-76881579 MS.gene71662:CDS 45.0%
TTCAGTTAGACACCAATCGC+TGG + chr1.1:76880848-76880867 MS.gene71662:CDS 45.0%
TTCCCAAGTCTTGGGATCAA+GGG - chr1.1:76880189-76880208 None:intergenic 45.0%
TTCCTTTCTCCCTTCTTGGT+AGG + chr1.1:76880341-76880360 MS.gene71662:intron 45.0%
TTGATCCCAAGACTTGGGAA+TGG + chr1.1:76880189-76880208 MS.gene71662:CDS 45.0%
TTGGGAATGGAACAAGGTTG+TGG + chr1.1:76880202-76880221 MS.gene71662:intron 45.0%
! GACAAGAATGCCTCTGAGAA+AGG + chr1.1:76880140-76880159 MS.gene71662:CDS 45.0%
! TAACCACAAACAGAAGCGCA+AGG - chr1.1:76878052-76878071 None:intergenic 45.0%
!! GGTATTTTTCTGGGGGTCTA+GGG - chr1.1:76880283-76880302 None:intergenic 45.0%
!! GGTTTGAGTTGCCTAAGAAG+AGG - chr1.1:76880261-76880280 None:intergenic 45.0%
!! GTACCCTCTGGAGTTAAGAA+AGG + chr1.1:76881079-76881098 MS.gene71662:CDS 45.0%
!! GTATTTTTCTGGGGGTCTAG+GGG - chr1.1:76880282-76880301 None:intergenic 45.0%
!! TCTGCTATTTGGTGGTGTTG+TGG + chr1.1:76880431-76880450 MS.gene71662:CDS 45.0%
AAGAGGAGGGCTCTGCTATT+TGG + chr1.1:76880420-76880439 MS.gene71662:CDS 50.0%
ATCTCTTCCAACAGCCATGC+AGG - chr1.1:76881577-76881596 None:intergenic 50.0%
GACATCGGATGGTATGTTCG+AGG + chr1.1:76878218-76878237 MS.gene71662:intron 50.0%
GAGGGAGTGAAAAGGGGAAT+TGG + chr1.1:76879265-76879284 MS.gene71662:intron 50.0%
GCAGGAATTAATGCGTCCAC+AGG - chr1.1:76881559-76881578 None:intergenic 50.0%
GTCCCTTGATCCCAAGACTT+GGG + chr1.1:76880184-76880203 MS.gene71662:CDS 50.0%
GTGCTCATCAAGCTGTTGCT+TGG + chr1.1:76877852-76877871 MS.gene71662:CDS 50.0%
TCACCTTGCGCTTCTGTTTG+TGG + chr1.1:76878046-76878065 MS.gene71662:intron 50.0%
TGAAAACCACTACGCCCAGT+TGG - chr1.1:76879866-76879885 None:intergenic 50.0%
TGAGAGGGAGGGAGTGAAAA+GGG + chr1.1:76879258-76879277 MS.gene71662:intron 50.0%
TTCTAGGCAGTGAAACCCTG+TGG + chr1.1:76881540-76881559 MS.gene71662:intron 50.0%
! AACAGCTTGATGAGCACTGC+GGG - chr1.1:76877849-76877868 None:intergenic 50.0%
! CAACAGCTTGATGAGCACTG+CGG - chr1.1:76877850-76877869 None:intergenic 50.0%
! TTCCGTTTGCTCTTGACTCG+AGG + chr1.1:76880933-76880952 MS.gene71662:intron 50.0%
!! CGGTATTTTTCTGGGGGTCT+AGG - chr1.1:76880284-76880303 None:intergenic 50.0%
AAGAAGAGTGGGATGCCTCC+TGG + chr1.1:76880366-76880385 MS.gene71662:CDS 55.0%
AGCCTAAGCCTGGAGCAATG+TGG + chr1.1:76879840-76879859 MS.gene71662:CDS 55.0%
CACATGGAAAACCCTGCACG+AGG - chr1.1:76880393-76880412 None:intergenic 55.0%
CTGGAGCAATGTGGCCAACT+GGG + chr1.1:76879849-76879868 MS.gene71662:CDS 55.0%
GAGAGGGAGGGAGTGAAAAG+GGG + chr1.1:76879259-76879278 MS.gene71662:intron 55.0%
GGCCTCGAGTCAAGAGCAAA+CGG - chr1.1:76880938-76880957 None:intergenic 55.0%
GGTCCCTTGATCCCAAGACT+TGG + chr1.1:76880183-76880202 MS.gene71662:CDS 55.0%
GTGAGAGGGAGGGAGTGAAA+AGG + chr1.1:76879257-76879276 MS.gene71662:intron 55.0%
! ACAGCTTGATGAGCACTGCG+GGG - chr1.1:76877848-76877867 None:intergenic 55.0%
! AGGAGGGCTCTGCTATTTGG+TGG + chr1.1:76880423-76880442 MS.gene71662:CDS 55.0%
ACCATCCGATGTCCCGAACG+TGG - chr1.1:76878211-76878230 None:intergenic 60.0%
ATGTGGCCAACTGGGCGTAG+TGG + chr1.1:76879857-76879876 MS.gene71662:CDS 60.0%
CCAGTTGGCCACATTGCTCC+AGG - chr1.1:76879851-76879870 None:intergenic 60.0%
CCTGGAGCAATGTGGCCAAC+TGG + chr1.1:76879848-76879867 MS.gene71662:CDS 60.0%
CTGCGGGGAGGAGGACTATT+AGG - chr1.1:76877833-76877852 None:intergenic 60.0%
CTGGTCCACGTTCGGGACAT+CGG + chr1.1:76878203-76878222 MS.gene71662:CDS 60.0%
GAAAACCCTGCACGAGGACC+AGG - chr1.1:76880387-76880406 None:intergenic 60.0%
GGCCACATTGCTCCAGGCTT+AGG - chr1.1:76879845-76879864 None:intergenic 60.0%
TCCACGTTCGGGACATCGGA+TGG + chr1.1:76878207-76878226 MS.gene71662:CDS 60.0%
! AGGGTGTCCTGGTCCACGTT+CGG + chr1.1:76878195-76878214 MS.gene71662:CDS 60.0%
AACCCTGCACGAGGACCAGG+AGG - chr1.1:76880384-76880403 None:intergenic 65.0%
ATGCCTCCTGGTCCTCGTGC+AGG + chr1.1:76880378-76880397 MS.gene71662:CDS 65.0%
CGATGTCCCGAACGTGGACC+AGG - chr1.1:76878205-76878224 None:intergenic 65.0%
GGGTGTCCTGGTCCACGTTC+GGG + chr1.1:76878196-76878215 MS.gene71662:CDS 65.0%
TGCCTCCTGGTCCTCGTGCA+GGG + chr1.1:76880379-76880398 MS.gene71662:CDS 65.0%
! GCTTGATGAGCACTGCGGGG+AGG - chr1.1:76877845-76877864 None:intergenic 65.0%
! TGATGAGCACTGCGGGGAGG+AGG - chr1.1:76877842-76877861 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr1.1 gene 76877758 76881740 76877758 ID=MS.gene71662
chr1.1 mRNA 76877758 76881740 76877758 ID=MS.gene71662.t1;Parent=MS.gene71662
chr1.1 exon 76877758 76877896 76877758 ID=MS.gene71662.t1.exon1;Parent=MS.gene71662.t1
chr1.1 CDS 76877758 76877896 76877758 ID=cds.MS.gene71662.t1;Parent=MS.gene71662.t1
chr1.1 exon 76877987 76878033 76877987 ID=MS.gene71662.t1.exon2;Parent=MS.gene71662.t1
chr1.1 CDS 76877987 76878033 76877987 ID=cds.MS.gene71662.t1;Parent=MS.gene71662.t1
chr1.1 exon 76878142 76878228 76878142 ID=MS.gene71662.t1.exon3;Parent=MS.gene71662.t1
chr1.1 CDS 76878142 76878228 76878142 ID=cds.MS.gene71662.t1;Parent=MS.gene71662.t1
chr1.1 exon 76878735 76878796 76878735 ID=MS.gene71662.t1.exon4;Parent=MS.gene71662.t1
chr1.1 CDS 76878735 76878796 76878735 ID=cds.MS.gene71662.t1;Parent=MS.gene71662.t1
chr1.1 exon 76879631 76879673 76879631 ID=MS.gene71662.t1.exon5;Parent=MS.gene71662.t1
chr1.1 CDS 76879631 76879673 76879631 ID=cds.MS.gene71662.t1;Parent=MS.gene71662.t1
chr1.1 exon 76879827 76879907 76879827 ID=MS.gene71662.t1.exon6;Parent=MS.gene71662.t1
chr1.1 CDS 76879827 76879907 76879827 ID=cds.MS.gene71662.t1;Parent=MS.gene71662.t1
chr1.1 exon 76880101 76880217 76880101 ID=MS.gene71662.t1.exon7;Parent=MS.gene71662.t1
chr1.1 CDS 76880101 76880217 76880101 ID=cds.MS.gene71662.t1;Parent=MS.gene71662.t1
chr1.1 exon 76880363 76880468 76880363 ID=MS.gene71662.t1.exon8;Parent=MS.gene71662.t1
chr1.1 CDS 76880363 76880468 76880363 ID=cds.MS.gene71662.t1;Parent=MS.gene71662.t1
chr1.1 exon 76880806 76880869 76880806 ID=MS.gene71662.t1.exon9;Parent=MS.gene71662.t1
chr1.1 CDS 76880806 76880869 76880806 ID=cds.MS.gene71662.t1;Parent=MS.gene71662.t1
chr1.1 exon 76881079 76881121 76881079 ID=MS.gene71662.t1.exon10;Parent=MS.gene71662.t1
chr1.1 CDS 76881079 76881121 76881079 ID=cds.MS.gene71662.t1;Parent=MS.gene71662.t1
chr1.1 exon 76881225 76881455 76881225 ID=MS.gene71662.t1.exon11;Parent=MS.gene71662.t1
chr1.1 CDS 76881225 76881455 76881225 ID=cds.MS.gene71662.t1;Parent=MS.gene71662.t1
chr1.1 exon 76881546 76881740 76881546 ID=MS.gene71662.t1.exon12;Parent=MS.gene71662.t1
chr1.1 CDS 76881546 76881740 76881546 ID=cds.MS.gene71662.t1;Parent=MS.gene71662.t1
Gene Sequence

>MS.gene71662

ATGCAGACTTTCGTCTATGGTGATCTTTATCGATATGATGTTGAGAAGCTGGAGTGGAAACTGATTTCGAGTCCTAATAGTCCTCCTCCCCGCAGTGCTCATCAAGCTGTTGCTTGGAAGAATTATGTTTATATTTTTGGTAATTTGATTTGGTTTTGTCTTGATATTTGTGTGGATTTGTGGATCACACTTGAAAGTTCATGTGTCGTTTTTTTTTAATGTGCTTTAGGTGGTGAATTTACATCTCCAAATCAAGAGAGGTTCCATCACTACAAGGTTAAATCTGCATCACCTTGCGCTTCTGTTTGTGGTTAAGGAAAATGTGGTTCACTTTACTGGGTTTTGACTGTTTGAGATGTTGCTTTTGAATTTTGATCGCTGTAGGATTTTTGGATGTTGGACCTGAAAACTAATCAGTGGGAACAACTTAATTTAAAAGGGTGTCCTGGTCCACGTTCGGGACATCGGATGGTATGTTCGAGGTCTTTTATGAAACCATGTAGTTAGTTACCAACTTTCTTGCAAGAATATCCGATTCATACATCTTAAGTCAAACGGGTTTTCGGTATGTTTGTTTCTGAAAATTCTTTTTTATTTAACGCAAATAACATCACACTACTGTCTGTTTGCATAGCAAAATTCCTCAGATTATTCTTTACGACATCAAATGCTCAAATGACATGAGCTCTGTTACCTGACAATCACAGATTCCCTCTATCTTGGTTATTTTCTTCTTTTAATTTGCAACCCAAAAGTTAAAAACATCACCACACGTTTTGAGAGCATAACATACTTCTAGTCCTGTTAGAAACACAAAAGCTTATTGATCTGCATTACATTTCATGTTCGTTCATCTCAAAGTAATATTCCATCTCTGAGAATTCCGTAAAGCCATATCAGAATTTAAACAACAAAAGAAATTATTATAACTGAACGGCTGAAGCTGATTTGATTACTAATATCCTTATCATTTGCAGGTATTATACAAGCACAAGATTATTCTTTTTGGTGGCTTTTATGATACACTTAGAGAAGTGAGGTTGTTAACACTGCTTAGTTCTTTTTTATTTGTATTCAAAAAAACTTTTTCCTGCATCTGATGAAAAACTTGCTATGGAAGCAGAGATTGAGCTTCTTTTTTCTTTGTGCATCTTCTTTGGATGTTTTCGTTGTTAGTGAATGTTAGCTTGGCAACATTGATTTCTAAGTTTTGGTTTTGAGGGATGGAATGGAAATCGTTTTTGCTTATGCCATATTTTTTTGTGTGTGATTGTAGATGCACGACATTTATGTTTGAATGGACCCTCGTTGGATTATTTTCAATCCTTATAGTTTGTAGTTGTATTTGGATGGTTGTGTTGGCCTACAGAAATTAAAGTTATTTAGTAGCGAGCATGATATGAATAAGGGTCAATATGAGATTTTAAGTTGCGGCAAGTGGAATAAAGAAGGTGAGTGATATGAGTGTTGTTACTTGTTAGAGTAAATGATTAAAAGTAGTGAGAGGGAGGGAGTGAAAAGGGGAATTGGTATAGTAGTTTTTTTTCCTGATAAATTTAATTTCTCCTATTCCGTTATTGCAAGAAATTCCACGATCAATGTTCTTGACTCTGGAGATAGAAATATGGAATCTGCACAACAAAGTTCTCCTTTTCAATCCGATTTTATTTCTTTCTGTTCTCTTTTATGTTTCGCACGAGGTTACATTCTTTGCATGTATTGTATGTTATTGAACCGTATAGATTTTGCAACTAGATGCTTTTCACACATGAGAGTTAAATGGAGGCCTTTAAACCACATACAACTAGAGACTGATTATCGGTATTGATTCACTTGATGACCTTTCTATGTCACTTCTTAATTGGTTTTGCAGGTACTACAATGATCTATTTGTATTTGACCTTGATCAATTTAAGGTAAATTTATTTAATACACTATATTGTGTCCTAATTATGTTAATGTACTACTTGCTATTCCATAAGCAAAACTCAAACGTCGGCATGTATGATGTAATAGTGTTAATATAGTTTTTATTATGTGATCAACACCAATCTGATTTTGTGCTGCAGTGGCAAGAAATAAAGCCTAAGCCTGGAGCAATGTGGCCAACTGGGCGTAGTGGTTTTCAATTATTTGTTTACCAAGATGATGTGAGTAAAATACTAATCCCCTTATATGAAGCTAATTTTTGTTTTAAATTACTTATAGTTATGCTTTTGTTTATCATAATTGTCAAATTTTCCCACGTGTCGTTTCAATCATTATGATTAATTAGGGTGGCTAATTGAAGAATTTTTTAAGTTTAGAAGCTGTCTTCTTTACATTGTTACTTTTACATTGCAGATTTTCTTATATGGTGGCTATTCAAAAGAAGTTTCATCGGACAAGAATGCCTCTGAGAAAGGAATTGTTCATTCAGATATGTGGTCCCTTGATCCCAAGACTTGGGAATGGAACAAGGTTGTGGTTTGGAGTTTAGTATTTGGTGAATTTGTATATTCCTCTTCTTAGGCAACTCAAACCCCTAGACCCCCAGAAAAATACCGTATGTTATTATTTAATAGTTCAACTGTTTTCTTAACATTCCTTTCTCCCTTCTTGGTAGGTTAAGAAGAGTGGGATGCCTCCTGGTCCTCGTGCAGGGTTTTCCATGTGTGTTCATAAGAGGAGGGCTCTGCTATTTGGTGGTGTTGTGGATATAGAAGTTGAAGGTAGCCTTTTATTTTCATGATTATTTTTTGCAATTTATGACCATCTAATCTGCATACACTTATAATTAAATGAACGGGACTCACTGCACAAGATCTCATCAGTGAGGCCTTTTTAATGTTTACAAACAATTAATATGATCTGCAGTCTGATTAAATTCTTTCGGAGGAATTAAATGAATGGGATTCACTGCACAAGATCTCATCAGTGAGGCCTTTTTAATGTTTACAAACAATTAATATGATCCGCAGTCTGATTAAATTCTTTTCGGAGGAAGTGTGTTTATTTGTTTATGCTTGCTGTATGGTTGGTTTTTCTAATTGCACTTAAATCATGCAGGCGATGCAATGATGAGCTTGTTCTTGAATGAGCTTTATGGCTTTCAGTTAGACACCAATCGCTGGTAAGTTTAGATTGCTTCAGTGATTACACCATTTTCTTAAGTTTCCATTTATGTAATAAATTCTTCCGTTTGCTCTTGACTCGAGGCCTTCGTAATTTTTTCATTAATTTTTAATTTGAGCTTTTCTGCATATGCTGGTTAGAGTTAAGTTGTGCTCTCATATTAAACGGTTCGTGGTTAGCTTATTATTGATGCTGTTTGTGAAATAGGTACCCTCTGGAGTTAAGAAAGGATAAATCAACAAAAGATAAGGTAGATTTGATACACAGTACATTTATTACTTCCAATTTTTTTCTTTCTTTTTTTACTATTTTGTATGCAATAGTTTTGCTGCCTAATGAAATGGGTTTTGCAGTTAAGAAAGACCGAACAAAATTGTACTAACGATGTCGACAAGAAGGCAGAACCACTATCTACTGCAAGAGATGAAGCTGAGGATATGGAATACGAAGAAAGCAGCATTAATGATATATCCCAGAATATTGCATCAAAGATTACCATTGCTGACAATGAAACACTTACCAAACCTGAAGGAAAGTCTAAGGAATCTGGTGCTAAATTCGACATTCAAAATTCTTTGCCCGAGGTTTGCATTTTGAACCAACAATCTTAGTGATGACACTGGTTTTAGCTTTGCTCATTTATTTATTTTATTGAATTTCTCCAAACTTTCTAGGCAGTGAAACCCTGTGGACGCATTAATTCCTGCATGGCTGTTGGAAGAGATACACTATATATATATGGTGGCATGATGGAGATTAAAGATCAAGAAATCACTCTTGACGACTTGTACTCTCTCAACCTTAGCAAACTTGATGAATGGAAGTGCATTATACCGGTTTGTGTTCTTTCCTTGACTACTTTTGGCTGA
Protein sequence

>MS.gene71662.t1

MQTFVYGDLYRYDVEKLEWKLISSPNSPPPRSAHQAVAWKNYVYIFGGEFTSPNQERFHHYKDFWMLDLKTNQWEQLNLKGCPGPRSGHRMVLYKHKIILFGGFYDTLREVRYYNDLFVFDLDQFKWQEIKPKPGAMWPTGRSGFQLFVYQDDIFLYGGYSKEVSSDKNASEKGIVHSDMWSLDPKTWEWNKVKKSGMPPGPRAGFSMCVHKRRALLFGGVVDIEVEGDAMMSLFLNELYGFQLDTNRWYPLELRKDKSTKDKLRKTEQNCTNDVDKKAEPLSTARDEAEDMEYEESSINDISQNIASKITIADNETLTKPEGKSKESGAKFDIQNSLPEAVKPCGRINSCMAVGRDTLYIYGGMMEIKDQEITLDDLYSLNLSKLDEWKCIIPVCVLSLTTFG