Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71754.t1 | XP_013470110.1 | 99.2 | 378 | 3 | 0 | 1 | 378 | 35 | 412 | 5.80E-207 | 729.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71754.t1 | Q6EWX1 | 67.5 | 375 | 122 | 0 | 1 | 375 | 42 | 416 | 1.1e-142 | 507.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71754.t1 | A0A072VRS3 | 99.2 | 378 | 3 | 0 | 1 | 378 | 35 | 412 | 4.2e-207 | 729.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene71754 | MS.gene041794 | PPI |
| MS.gene71754 | MS.gene61736 | PPI |
| MS.gene71754 | MS.gene028307 | PPI |
| MS.gene71754 | MS.gene07051 | PPI |
| MS.gene71754 | MS.gene36485 | PPI |
| MS.gene71754 | MS.gene22500 | PPI |
| MS.gene71754 | MS.gene28807 | PPI |
| MS.gene71754 | MS.gene041861 | PPI |
| MS.gene71754 | MS.gene35150 | PPI |
| MS.gene71754 | MS.gene072702 | PPI |
| MS.gene71754 | MS.gene61735 | PPI |
| MS.gene71754 | MS.gene061260 | PPI |
| MS.gene71754 | MS.gene023147 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71754.t1 | MTR_1g109100 | 99.206 | 378 | 3 | 0 | 1 | 378 | 35 | 412 | 0.0 | 758 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 57 sgRNAs with CRISPR-Local
Find 290 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCTGTTGAATTTAATAAAA+AGG | 0.163019 | 1.1:+77830314 | MS.gene71754:CDS |
| TGATGACAACTCCCAATTTA+TGG | 0.172707 | 1.1:+77829382 | MS.gene71754:CDS |
| ATGCAAGGAATGTCTGTTTA+AGG | 0.197705 | 1.1:+77831989 | MS.gene71754:CDS |
| TGACTTAATATGCAGATTAT+TGG | 0.208437 | 1.1:+77830245 | MS.gene71754:intron |
| TTAGCACGGCTACCATAAAT+TGG | 0.233162 | 1.1:-77829394 | None:intergenic |
| GATGAAATTAAGAGCTTTAC+AGG | 0.247017 | 1.1:-77832225 | None:intergenic |
| AACAATTCTATTCTTCTTCT+CGG | 0.338321 | 1.1:+77827802 | MS.gene71754:CDS |
| TTCATCTGCTGAACTGCATC+AGG | 0.360075 | 1.1:+77832242 | MS.gene71754:CDS |
| ATTCCAGTTTGGGCTGTCTC+TGG | 0.370514 | 1.1:-77830989 | None:intergenic |
| CTTTGTGAATCTTCTATTGA+AGG | 0.371799 | 1.1:-77830152 | None:intergenic |
| TGAATTGAATACCACTGAAA+TGG | 0.393104 | 1.1:-77827982 | None:intergenic |
| AAAACAAACCGCAAGCTTGC+CGG | 0.404588 | 1.1:-77827836 | None:intergenic |
| TGCAGACTGGGTTTCTGTCC+CGG | 0.407219 | 1.1:+77830937 | MS.gene71754:CDS |
| CTCATATGGATTTGCAGACT+GGG | 0.411488 | 1.1:+77830925 | MS.gene71754:CDS |
| TTTGGTAAGCATGAAGAGAT+TGG | 0.418591 | 1.1:+77831806 | MS.gene71754:CDS |
| GCAGGATGCAGATCAGCTAT+TGG | 0.419931 | 1.1:+77830079 | MS.gene71754:intron |
| CATCCAGAGACAGCCCAAAC+TGG | 0.421385 | 1.1:+77830986 | MS.gene71754:CDS |
| TTGCATAGTAATCAGAAGTC+TGG | 0.423976 | 1.1:-77831972 | None:intergenic |
| AATAGAATTGTTGCATGCTT+CGG | 0.424553 | 1.1:-77827791 | None:intergenic |
| TCTCATATGGATTTGCAGAC+TGG | 0.428138 | 1.1:+77830924 | MS.gene71754:CDS |
| ATTCTATGCAGTCTCTCATA+TGG | 0.440596 | 1.1:+77830911 | MS.gene71754:CDS |
| TGATGATATCTCTGCATTCA+AGG | 0.443856 | 1.1:+77828137 | MS.gene71754:CDS |
| TGCAAGGAATGTCTGTTTAA+GGG | 0.455038 | 1.1:+77831990 | MS.gene71754:CDS |
| TGAGTTTGACCTATTTGCTC+TGG | 0.461939 | 1.1:+77829534 | MS.gene71754:CDS |
| TCATCACAAGCTGTAGTACT+AGG | 0.465590 | 1.1:+77829812 | MS.gene71754:CDS |
| GCAGACTGGGTTTCTGTCCC+GGG | 0.468114 | 1.1:+77830938 | MS.gene71754:CDS |
| AATTCAACAGCATAATCATA+TGG | 0.474595 | 1.1:-77830303 | None:intergenic |
| AGAATATTATAGAAGACAAA+AGG | 0.484882 | 1.1:+77830738 | MS.gene71754:intron |
| ATAACAGTTCACGGTGTAGT+AGG | 0.487465 | 1.1:-77832158 | None:intergenic |
| AATACCACTGAAATGGAGTC+AGG | 0.487487 | 1.1:-77827975 | None:intergenic |
| TCTTTGTGTTGTAGGGAATG+TGG | 0.493089 | 1.1:+77829478 | MS.gene71754:intron |
| CTTCTCGGTCCTCGTGGCTC+CGG | 0.495181 | 1.1:+77827817 | MS.gene71754:CDS |
| CTGTGAAACATAACAGTTCA+CGG | 0.497472 | 1.1:-77832167 | None:intergenic |
| AAAGTCTTACCAGAGCAAAT+AGG | 0.499980 | 1.1:-77829543 | None:intergenic |
| TAGCACGGCTACCATAAATT+GGG | 0.511392 | 1.1:-77829393 | None:intergenic |
| ATTGTTGCATGCTTCGGCGA+CGG | 0.511821 | 1.1:-77827785 | None:intergenic |
| CAAAATATAAAGTTCTAAAA+CGG | 0.513751 | 1.1:-77831787 | None:intergenic |
| TCGTGGCTCCGGCAAGCTTG+CGG | 0.535340 | 1.1:+77827828 | MS.gene71754:CDS |
| TGAACTGCATCAGGGACTAA+AGG | 0.543112 | 1.1:+77832251 | MS.gene71754:CDS |
| ACTAGGCATTAGCTGCCGCC+TGG | 0.551424 | 1.1:+77829829 | MS.gene71754:CDS |
| AAACTTCACTTACTTTAGCA+CGG | 0.551854 | 1.1:-77829408 | None:intergenic |
| CAACAGCATAATCATATGGA+AGG | 0.569153 | 1.1:-77830299 | None:intergenic |
| TGTGAATCTTCTATTGAAGG+TGG | 0.575848 | 1.1:-77830149 | None:intergenic |
| AATTGCTAGGCAGTTATGCA+TGG | 0.577746 | 1.1:+77829238 | MS.gene71754:CDS |
| TATGGAAGGCTTGAATCTAT+CGG | 0.580595 | 1.1:-77830285 | None:intergenic |
| AGACTTCTGATTACTATGCA+AGG | 0.582785 | 1.1:+77831974 | MS.gene71754:CDS |
| AACTTCAATGCAGTAATGAA+AGG | 0.599903 | 1.1:+77831852 | MS.gene71754:CDS |
| TGTTCAACCAGGAAATTGCT+AGG | 0.615846 | 1.1:+77829225 | MS.gene71754:intron |
| ATATCCTGACTCCATTTCAG+TGG | 0.616403 | 1.1:+77827971 | MS.gene71754:CDS |
| TCAATTGCTATTCTCTAAAG+CGG | 0.616630 | 1.1:+77829265 | MS.gene71754:CDS |
| TCATCTGCTGAACTGCATCA+GGG | 0.621248 | 1.1:+77832243 | MS.gene71754:CDS |
| ATTCTTCTTCTCGGTCCTCG+TGG | 0.621969 | 1.1:+77827811 | MS.gene71754:CDS |
| TTTCAACAGATGCTTGACAG+AGG | 0.667077 | 1.1:-77830798 | None:intergenic |
| CTTCAATAGAAGATTCACAA+AGG | 0.687687 | 1.1:+77830153 | MS.gene71754:CDS |
| GCAAGCTTGCCGGAGCCACG+AGG | 0.691735 | 1.1:-77827826 | None:intergenic |
| TTATGTTTCACAGACAACAG+AGG | 0.703684 | 1.1:+77832177 | MS.gene71754:CDS |
| CAAAAGTTAGTAGAACGTGA+CGG | 0.704277 | 1.1:+77832501 | MS.gene71754:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAATAATAATTTA+TGG | - | chr1.1:77828026-77828045 | None:intergenic | 0.0% |
| !! | AAAAAAATAATAATTTATGG+AGG | - | chr1.1:77828023-77828042 | None:intergenic | 10.0% |
| !! | AAATTATAATATGATATAGA+AGG | - | chr1.1:77828183-77828202 | None:intergenic | 10.0% |
| !! | ATAATTTATTAATCTTATCA+TGG | + | chr1.1:77829126-77829145 | MS.gene71754:intron | 10.0% |
| !! | TTATGAATACTAAATAATAA+AGG | + | chr1.1:77829089-77829108 | MS.gene71754:intron | 10.0% |
| !!! | ATTTTTTAATTTGTATGTTT+TGG | + | chr1.1:77832466-77832485 | MS.gene71754:intron | 10.0% |
| !!! | TAAAACTGTAATTTTTATTT+TGG | + | chr1.1:77829510-77829529 | MS.gene71754:CDS | 10.0% |
| !!! | TATAAAGTAAATAATTTTTG+TGG | + | chr1.1:77832055-77832074 | MS.gene71754:intron | 10.0% |
| !! | AAACAAAAGAGAAAATTAAA+CGG | - | chr1.1:77827905-77827924 | None:intergenic | 15.0% |
| !! | ATAAAAAATGGTTAAAATTC+AGG | - | chr1.1:77828331-77828350 | None:intergenic | 15.0% |
| !! | ATACTAAATAATAAAGGAAT+TGG | + | chr1.1:77829095-77829114 | MS.gene71754:intron | 15.0% |
| !! | ATTTACTTTATATACACATT+TGG | - | chr1.1:77832047-77832066 | None:intergenic | 15.0% |
| !! | CAAATTGAAAATAATAACTA+GGG | - | chr1.1:77828065-77828084 | None:intergenic | 15.0% |
| !! | TAAAAAATGGTTAAAATTCA+GGG | - | chr1.1:77828330-77828349 | None:intergenic | 15.0% |
| !! | TATATATAAGTTAGTAACTA+TGG | + | chr1.1:77830529-77830548 | MS.gene71754:intron | 15.0% |
| !! | TCAAATTGAAAATAATAACT+AGG | - | chr1.1:77828066-77828085 | None:intergenic | 15.0% |
| !! | TTGGATAATAATTATTTCAT+GGG | + | chr1.1:77831570-77831589 | MS.gene71754:intron | 15.0% |
| !!! | CAAAATATAAAGTTCTAAAA+CGG | - | chr1.1:77831790-77831809 | None:intergenic | 15.0% |
| !!! | CAATTTGAATTATATTTTCA+TGG | + | chr1.1:77828078-77828097 | MS.gene71754:intron | 15.0% |
| !!! | TAATATTCTGTAATTTGTAA+AGG | - | chr1.1:77830727-77830746 | None:intergenic | 15.0% |
| !!! | TTTTGAAATATTCATAATCT+CGG | - | chr1.1:77828274-77828293 | None:intergenic | 15.0% |
| !! | AAAATAATAACTAGGGTAAA+TGG | - | chr1.1:77828058-77828077 | None:intergenic | 20.0% |
| !! | AAATAATAACTAGGGTAAAT+GGG | - | chr1.1:77828057-77828076 | None:intergenic | 20.0% |
| !! | AATTGTGAAGACTTAATAAT+TGG | + | chr1.1:77830451-77830470 | MS.gene71754:intron | 20.0% |
| !! | ACTCTATTAAATTATCAAGT+TGG | + | chr1.1:77828303-77828322 | MS.gene71754:intron | 20.0% |
| !! | AGAATATTATAGAAGACAAA+AGG | + | chr1.1:77830738-77830757 | MS.gene71754:intron | 20.0% |
| !! | CATAAAAATAAAATACAGGT+GGG | - | chr1.1:77832316-77832335 | None:intergenic | 20.0% |
| !! | CTTGGATAATAATTATTTCA+TGG | + | chr1.1:77831569-77831588 | MS.gene71754:intron | 20.0% |
| !! | GATGCATAAAAATAAAATAC+AGG | - | chr1.1:77832320-77832339 | None:intergenic | 20.0% |
| !! | TAAATAATAAAGGAATTGGA+TGG | + | chr1.1:77829099-77829118 | MS.gene71754:intron | 20.0% |
| !! | TATAATCATAAATGAACATC+TGG | - | chr1.1:77830513-77830532 | None:intergenic | 20.0% |
| !! | TGCTGTTGAATTTAATAAAA+AGG | + | chr1.1:77830314-77830333 | MS.gene71754:CDS | 20.0% |
| !! | TTATTCAAACAAAAAGTCAT+GGG | + | chr1.1:77828516-77828535 | MS.gene71754:intron | 20.0% |
| !! | TTTGAATAACAAATGTTAGT+AGG | - | chr1.1:77828505-77828524 | None:intergenic | 20.0% |
| !!! | AAATTCCTGTAAGTATATTT+TGG | + | chr1.1:77830818-77830837 | MS.gene71754:intron | 20.0% |
| !!! | AATGTTTTGTATTACATGTT+TGG | + | chr1.1:77829687-77829706 | MS.gene71754:intron | 20.0% |
| !!! | ACTTGATAATTTAATAGAGT+CGG | - | chr1.1:77828303-77828322 | None:intergenic | 20.0% |
| !!! | ATTAAAACTACCATTTTCAT+AGG | + | chr1.1:77830637-77830656 | MS.gene71754:intron | 20.0% |
| !!! | CGTTTTAGAACTTTATATTT+TGG | + | chr1.1:77831788-77831807 | MS.gene71754:CDS | 20.0% |
| !!! | CTCTTTTGTTTTTTCTTTTT+AGG | + | chr1.1:77827914-77827933 | MS.gene71754:intron | 20.0% |
| !!! | TCTTTATAATTTGGTAATGA+TGG | + | chr1.1:77831171-77831190 | MS.gene71754:intron | 20.0% |
| !!! | TGTAAATTTTCCTATGAAAA+TGG | - | chr1.1:77830650-77830669 | None:intergenic | 20.0% |
| !!! | TGTTTTTTCTTTTTAGGTTT+TGG | + | chr1.1:77827920-77827939 | MS.gene71754:intron | 20.0% |
| !!! | TTAACCATTTTTTATCAAGT+TGG | + | chr1.1:77828336-77828355 | MS.gene71754:intron | 20.0% |
| !!! | TTTTAATTCTCTCAAGTTAA+TGG | + | chr1.1:77828644-77828663 | MS.gene71754:intron | 20.0% |
| ! | AAACTAGAGTAAATGTTTGT+CGG | - | chr1.1:77831491-77831510 | None:intergenic | 25.0% |
| ! | AACAATTCTATTCTTCTTCT+CGG | + | chr1.1:77827802-77827821 | MS.gene71754:CDS | 25.0% |
| ! | AACTTGAGAGAATTAAAACT+AGG | - | chr1.1:77828642-77828661 | None:intergenic | 25.0% |
| ! | AAGTACCAAAATATACTTAC+AGG | - | chr1.1:77830826-77830845 | None:intergenic | 25.0% |
| ! | AATAATAATTTATGGAGGCA+AGG | - | chr1.1:77828018-77828037 | None:intergenic | 25.0% |
| ! | AATGATAAAGGAAAATTGGT+TGG | + | chr1.1:77828814-77828833 | MS.gene71754:intron | 25.0% |
| ! | AATTATAAAGAAAACCCAAC+AGG | - | chr1.1:77831162-77831181 | None:intergenic | 25.0% |
| ! | AATTCAACAGCATAATCATA+TGG | - | chr1.1:77830306-77830325 | None:intergenic | 25.0% |
| ! | ACAGTATTAATCTTCAACAA+TGG | + | chr1.1:77828876-77828895 | MS.gene71754:intron | 25.0% |
| ! | ATGAGATACTATACAAGAAA+AGG | - | chr1.1:77829189-77829208 | None:intergenic | 25.0% |
| ! | ATTATAAAGAAAACCCAACA+GGG | - | chr1.1:77831161-77831180 | None:intergenic | 25.0% |
| ! | ATTTGACCAGAATTCAAAAA+GGG | - | chr1.1:77828951-77828970 | None:intergenic | 25.0% |
| ! | CCTAAATGATAAAGGAAAAT+TGG | + | chr1.1:77828810-77828829 | MS.gene71754:intron | 25.0% |
| ! | GATTAACAAGCAAATCAAAT+TGG | - | chr1.1:77829988-77830007 | None:intergenic | 25.0% |
| ! | GCATAAAAATAAAATACAGG+TGG | - | chr1.1:77832317-77832336 | None:intergenic | 25.0% |
| ! | GGTCTATAGATTTAATTATG+AGG | - | chr1.1:77831396-77831415 | None:intergenic | 25.0% |
| ! | GTTATTCAAACAAAAAGTCA+TGG | + | chr1.1:77828515-77828534 | MS.gene71754:intron | 25.0% |
| ! | TACAAACTTGTGAAATTCAA+AGG | + | chr1.1:77828982-77829001 | MS.gene71754:intron | 25.0% |
| ! | TGACTTAATATGCAGATTAT+TGG | + | chr1.1:77830245-77830264 | MS.gene71754:intron | 25.0% |
| ! | TTATTAGCTGGTCAAAAATA+TGG | + | chr1.1:77831296-77831315 | MS.gene71754:intron | 25.0% |
| ! | TTGACCAACTTGATAAAAAA+TGG | - | chr1.1:77828343-77828362 | None:intergenic | 25.0% |
| !! | AAGAGCGTATTATAACTATA+AGG | - | chr1.1:77831076-77831095 | None:intergenic | 25.0% |
| !! | AATCTTATTGTTTGTTAACC+AGG | - | chr1.1:77829908-77829927 | None:intergenic | 25.0% |
| !! | ACTTTTTAAACATTCCAGTT+TGG | - | chr1.1:77831003-77831022 | None:intergenic | 25.0% |
| !! | ATATTTTCATGGATTTTTGC+AGG | + | chr1.1:77828089-77828108 | MS.gene71754:intron | 25.0% |
| !! | ATTTGATATGAACCTTTTGT+AGG | + | chr1.1:77829352-77829371 | MS.gene71754:intron | 25.0% |
| !! | CCAATTTTCCTTTATCATTT+AGG | - | chr1.1:77828813-77828832 | None:intergenic | 25.0% |
| !! | CTTGATAATTTAATAGAGTC+GGG | - | chr1.1:77828302-77828321 | None:intergenic | 25.0% |
| !! | CTTTTTAAACATTCCAGTTT+GGG | - | chr1.1:77831002-77831021 | None:intergenic | 25.0% |
| !! | GTTGGGTTTTCTTTATAATT+TGG | + | chr1.1:77831162-77831181 | MS.gene71754:intron | 25.0% |
| !! | TAAAGACTTATTGACTACAA+AGG | + | chr1.1:77831607-77831626 | MS.gene71754:intron | 25.0% |
| !! | TAAAGTAAGTGAAGTTTTCT+TGG | + | chr1.1:77829414-77829433 | MS.gene71754:intron | 25.0% |
| !! | TTGATAATTTAATAGAGTCG+GGG | - | chr1.1:77828301-77828320 | None:intergenic | 25.0% |
| !! | TTTGTTATCTTTGTGTTGTA+GGG | + | chr1.1:77829471-77829490 | MS.gene71754:intron | 25.0% |
| !!! | ATTTGTTATCTTTGTGTTGT+AGG | + | chr1.1:77829470-77829489 | MS.gene71754:intron | 25.0% |
| !!! | TTTAATTTGTATGTTTTGGC+AGG | + | chr1.1:77832470-77832489 | MS.gene71754:intron | 25.0% |
| AAAAGCTTAGCATAGATTAC+TGG | + | chr1.1:77829593-77829612 | MS.gene71754:intron | 30.0% | |
| AAAATACCACCAAATAAGCA+TGG | - | chr1.1:77832111-77832130 | None:intergenic | 30.0% | |
| AAAATTCACACTTTCATACC+TGG | + | chr1.1:77830692-77830711 | MS.gene71754:intron | 30.0% | |
| AAACTTCACTTACTTTAGCA+CGG | - | chr1.1:77829411-77829430 | None:intergenic | 30.0% | |
| AAATACCACCAAATAAGCAT+GGG | - | chr1.1:77832110-77832129 | None:intergenic | 30.0% | |
| AACTGTTACTCTACATTCTA+AGG | - | chr1.1:77828550-77828569 | None:intergenic | 30.0% | |
| AACTTCAATGCAGTAATGAA+AGG | + | chr1.1:77831852-77831871 | MS.gene71754:CDS | 30.0% | |
| AAGATATAAGAGATGCGTTA+AGG | - | chr1.1:77831923-77831942 | None:intergenic | 30.0% | |
| AATAGAATTGTTGCATGCTT+CGG | - | chr1.1:77827794-77827813 | None:intergenic | 30.0% | |
| ACACATCTACATCTACTTAA+AGG | + | chr1.1:77827863-77827882 | MS.gene71754:intron | 30.0% | |
| ACATTTACAGCTATGTAGAA+TGG | + | chr1.1:77829321-77829340 | MS.gene71754:intron | 30.0% | |
| ACTCACAGATAAAGTAAATG+AGG | - | chr1.1:77828211-77828230 | None:intergenic | 30.0% | |
| ACTGTTACTCTACATTCTAA+GGG | - | chr1.1:77828549-77828568 | None:intergenic | 30.0% | |
| AGAATGTAGAGTAACAGTTA+AGG | + | chr1.1:77828551-77828570 | MS.gene71754:intron | 30.0% | |
| AGCAAGTAGAAGTAAATGTT+TGG | - | chr1.1:77829728-77829747 | None:intergenic | 30.0% | |
| ATCAAAATAATTGACCATGC+AGG | + | chr1.1:77830061-77830080 | MS.gene71754:intron | 30.0% | |
| ATTCAACATAAAAAACCCTC+GGG | - | chr1.1:77830358-77830377 | None:intergenic | 30.0% | |
| CACATCTACATCTACTTAAA+GGG | + | chr1.1:77827864-77827883 | MS.gene71754:intron | 30.0% | |
| CATTCTTGCCTAAATGATAA+AGG | + | chr1.1:77828802-77828821 | MS.gene71754:intron | 30.0% | |
| CTTATAGATTTGTCTTCTTG+AGG | + | chr1.1:77828912-77828931 | MS.gene71754:intron | 30.0% | |
| CTTCAATAGAAGATTCACAA+AGG | + | chr1.1:77830153-77830172 | MS.gene71754:CDS | 30.0% | |
| CTTGTGAAATTCAAAGGAAT+TGG | + | chr1.1:77828988-77829007 | MS.gene71754:intron | 30.0% | |
| CTTTGTGAATCTTCTATTGA+AGG | - | chr1.1:77830155-77830174 | None:intergenic | 30.0% | |
| GAATGTAGAGTAACAGTTAA+GGG | + | chr1.1:77828552-77828571 | MS.gene71754:intron | 30.0% | |
| GAATTTCACAAGTTTGTAGT+AGG | - | chr1.1:77828980-77828999 | None:intergenic | 30.0% | |
| GATGAAATTAAGAGCTTTAC+AGG | - | chr1.1:77832228-77832247 | None:intergenic | 30.0% | |
| GATTCAACATAAAAAACCCT+CGG | - | chr1.1:77830359-77830378 | None:intergenic | 30.0% | |
| GATTTGACCAGAATTCAAAA+AGG | - | chr1.1:77828952-77828971 | None:intergenic | 30.0% | |
| GTCAATTACCATTGATATCT+AGG | - | chr1.1:77831417-77831436 | None:intergenic | 30.0% | |
| TATGGAAGAACTTAAACACT+TGG | + | chr1.1:77831314-77831333 | MS.gene71754:intron | 30.0% | |
| TATTCATTTCGCATACTACT+TGG | + | chr1.1:77830398-77830417 | MS.gene71754:intron | 30.0% | |
| TCTATAGACCTAGATATCAA+TGG | + | chr1.1:77831406-77831425 | MS.gene71754:intron | 30.0% | |
| TGAAATTCAAAGGAATTGGA+TGG | + | chr1.1:77828992-77829011 | MS.gene71754:intron | 30.0% | |
| TGAATTGAATACCACTGAAA+TGG | - | chr1.1:77827985-77828004 | None:intergenic | 30.0% | |
| TGTGCTTCAACTAAAGAATA+CGG | - | chr1.1:77831667-77831686 | None:intergenic | 30.0% | |
| TTGTAAAGGATTTCTTTACC+AGG | - | chr1.1:77830713-77830732 | None:intergenic | 30.0% | |
| ! | ATTTCCTATTTTCAGTGATC+AGG | + | chr1.1:77829868-77829887 | MS.gene71754:intron | 30.0% |
| ! | ATTTTTGACCAGCTAATAAG+CGG | - | chr1.1:77831295-77831314 | None:intergenic | 30.0% |
| ! | CTGATGTATTGTGATTTTTG+AGG | + | chr1.1:77828671-77828690 | MS.gene71754:intron | 30.0% |
| ! | GAAGTTTTCTTGGTTGAAAA+AGG | + | chr1.1:77829424-77829443 | MS.gene71754:intron | 30.0% |
| ! | GTTTTGTCAGTTAACTTACA+GGG | - | chr1.1:77832290-77832309 | None:intergenic | 30.0% |
| ! | TATTGAGCAATTTGCTTCTT+TGG | - | chr1.1:77831341-77831360 | None:intergenic | 30.0% |
| ! | TCAATTGCTATTCTCTAAAG+CGG | + | chr1.1:77829265-77829284 | MS.gene71754:CDS | 30.0% |
| ! | TCTTTGAGTTCTTTCAATCA+TGG | + | chr1.1:77832402-77832421 | MS.gene71754:intron | 30.0% |
| ! | TGTTTTGTCAGTTAACTTAC+AGG | - | chr1.1:77832291-77832310 | None:intergenic | 30.0% |
| ! | TTGCTTACTAATTTTCTGCA+GGG | + | chr1.1:77829743-77829762 | MS.gene71754:intron | 30.0% |
| !! | ACCTTAGATTATTTCTGGTT+AGG | + | chr1.1:77829033-77829052 | MS.gene71754:intron | 30.0% |
| !! | TTGCTTTGTTTGCAATACAA+GGG | + | chr1.1:77828742-77828761 | MS.gene71754:intron | 30.0% |
| AAAAAACCCTCGGGATAAAA+AGG | - | chr1.1:77830349-77830368 | None:intergenic | 35.0% | |
| AAAGCTGTGATGCTTTCATT+AGG | + | chr1.1:77829058-77829077 | MS.gene71754:intron | 35.0% | |
| AAAGTCTTACCAGAGCAAAT+AGG | - | chr1.1:77829546-77829565 | None:intergenic | 35.0% | |
| AACATTTCACACAGAACACA+CGG | - | chr1.1:77829673-77829692 | None:intergenic | 35.0% | |
| AGACTTCTGATTACTATGCA+AGG | + | chr1.1:77831974-77831993 | MS.gene71754:CDS | 35.0% | |
| AGTAGTCATAGGACTAATCT+GGG | + | chr1.1:77828403-77828422 | MS.gene71754:intron | 35.0% | |
| AGTTTCTACATGAAGACCAA+CGG | - | chr1.1:77831727-77831746 | None:intergenic | 35.0% | |
| ATGCAAGGAATGTCTGTTTA+AGG | + | chr1.1:77831989-77832008 | MS.gene71754:CDS | 35.0% | |
| ATTCTATGCAGTCTCTCATA+TGG | + | chr1.1:77830911-77830930 | MS.gene71754:CDS | 35.0% | |
| CAAAAGTTAGTAGAACGTGA+CGG | + | chr1.1:77832501-77832520 | MS.gene71754:CDS | 35.0% | |
| CAACAGCATAATCATATGGA+AGG | - | chr1.1:77830302-77830321 | None:intergenic | 35.0% | |
| CAGGTCTAAATAGTTATACC+TGG | + | chr1.1:77829887-77829906 | MS.gene71754:intron | 35.0% | |
| CATCAAATGATGCCTACAAA+AGG | - | chr1.1:77829367-77829386 | None:intergenic | 35.0% | |
| CCATATAACCCATGTGTTAA+GGG | + | chr1.1:77831513-77831532 | MS.gene71754:intron | 35.0% | |
| CTGTGAAACATAACAGTTCA+CGG | - | chr1.1:77832170-77832189 | None:intergenic | 35.0% | |
| CTGTTACTCTACATTCTAAG+GGG | - | chr1.1:77828548-77828567 | None:intergenic | 35.0% | |
| GCCTAACCAGAAATAATCTA+AGG | - | chr1.1:77829037-77829056 | None:intergenic | 35.0% | |
| GTGAATGCAAAGAACTGAAT+AGG | - | chr1.1:77830577-77830596 | None:intergenic | 35.0% | |
| GTTATATGTTACATGTGCAG+AGG | + | chr1.1:77832424-77832443 | MS.gene71754:intron | 35.0% | |
| GTTGTGTGATGTACAAAGTA+TGG | + | chr1.1:77829944-77829963 | MS.gene71754:intron | 35.0% | |
| GTTTGACATCATATTCAGCA+TGG | - | chr1.1:77830216-77830235 | None:intergenic | 35.0% | |
| TAAGTAGATGTAGATGTGTG+TGG | - | chr1.1:77827862-77827881 | None:intergenic | 35.0% | |
| TAGACCTGATCACTGAAAAT+AGG | - | chr1.1:77829875-77829894 | None:intergenic | 35.0% | |
| TATGGAAGGCTTGAATCTAT+CGG | - | chr1.1:77830288-77830307 | None:intergenic | 35.0% | |
| TCAAAGGAATTGGATGGTTA+TGG | + | chr1.1:77828998-77829017 | MS.gene71754:intron | 35.0% | |
| TCAATGGTAATTGACGAAGA+TGG | + | chr1.1:77831422-77831441 | MS.gene71754:intron | 35.0% | |
| TCACAATTGCAGAATATAGC+AGG | - | chr1.1:77830439-77830458 | None:intergenic | 35.0% | |
| TCCATATAACCCATGTGTTA+AGG | + | chr1.1:77831512-77831531 | MS.gene71754:intron | 35.0% | |
| TGAGAATCTATCACTGCATA+AGG | + | chr1.1:77830009-77830028 | MS.gene71754:intron | 35.0% | |
| TGAGTTAAGGGATAAGAAGT+TGG | + | chr1.1:77828468-77828487 | MS.gene71754:intron | 35.0% | |
| TGATGACAACTCCCAATTTA+TGG | + | chr1.1:77829382-77829401 | MS.gene71754:CDS | 35.0% | |
| TGATGATATCTCTGCATTCA+AGG | + | chr1.1:77828137-77828156 | MS.gene71754:CDS | 35.0% | |
| TGCAAGGAATGTCTGTTTAA+GGG | + | chr1.1:77831990-77832009 | MS.gene71754:CDS | 35.0% | |
| TGTGAATCTTCTATTGAAGG+TGG | - | chr1.1:77830152-77830171 | None:intergenic | 35.0% | |
| TTATGTTTCACAGACAACAG+AGG | + | chr1.1:77832177-77832196 | MS.gene71754:CDS | 35.0% | |
| TTGCATAGTAATCAGAAGTC+TGG | - | chr1.1:77831975-77831994 | None:intergenic | 35.0% | |
| TTTGGTAAGCATGAAGAGAT+TGG | + | chr1.1:77831806-77831825 | MS.gene71754:CDS | 35.0% | |
| ! | AAGCTTTTAGTAACAGTCAG+AGG | - | chr1.1:77829581-77829600 | None:intergenic | 35.0% |
| ! | AAGTATCCTTTTTATCCCGA+GGG | + | chr1.1:77830340-77830359 | MS.gene71754:intron | 35.0% |
| ! | ACAATGCCCTTTTTGAATTC+TGG | + | chr1.1:77828942-77828961 | MS.gene71754:intron | 35.0% |
| ! | AGCTTTTAGTAACAGTCAGA+GGG | - | chr1.1:77829580-77829599 | None:intergenic | 35.0% |
| ! | ATGCAGTTTCAAAGTTTTCC+CGG | - | chr1.1:77830959-77830978 | None:intergenic | 35.0% |
| ! | ATTTTCTGCAGGGTAAACAA+CGG | + | chr1.1:77829753-77829772 | MS.gene71754:intron | 35.0% |
| ! | CACGTTCTACTAACTTTTGA+AGG | - | chr1.1:77832500-77832519 | None:intergenic | 35.0% |
| ! | CATTTTATATTCTCTCCCGT+TGG | + | chr1.1:77831708-77831727 | MS.gene71754:intron | 35.0% |
| ! | CTTGCTTACTAATTTTCTGC+AGG | + | chr1.1:77829742-77829761 | MS.gene71754:intron | 35.0% |
| ! | GAGCATTTGATCTGTGTTTT+GGG | + | chr1.1:77832344-77832363 | MS.gene71754:intron | 35.0% |
| ! | GTGCATACGTTTTTGCATTT+TGG | + | chr1.1:77830487-77830506 | MS.gene71754:intron | 35.0% |
| ! | TGAGCATTTGATCTGTGTTT+TGG | + | chr1.1:77832343-77832362 | MS.gene71754:intron | 35.0% |
| ! | TGCAATGCTTTTCTTTTTCC+AGG | - | chr1.1:77831690-77831709 | None:intergenic | 35.0% |
| ! | TTCATGGATTTTTGCAGGTT+AGG | + | chr1.1:77828094-77828113 | MS.gene71754:intron | 35.0% |
| ! | TTTTCTCTCCCTTAACACAT+GGG | - | chr1.1:77831524-77831543 | None:intergenic | 35.0% |
| !! | CTTGCTTTGTTTGCAATACA+AGG | + | chr1.1:77828741-77828760 | MS.gene71754:intron | 35.0% |
| !! | TATTTTTACCATGTGTGTGC+AGG | + | chr1.1:77832125-77832144 | MS.gene71754:intron | 35.0% |
| !! | TCTTCAACAATGGATTAGCT+CGG | + | chr1.1:77828886-77828905 | MS.gene71754:intron | 35.0% |
| !!! | TTTTGCAGGTTAGGTTGAAT+GGG | + | chr1.1:77828103-77828122 | MS.gene71754:intron | 35.0% |
| !!! | TTTTTGCAGGTTAGGTTGAA+TGG | + | chr1.1:77828102-77828121 | MS.gene71754:intron | 35.0% |
| AAGGAAAATTGGTTGGCATG+AGG | + | chr1.1:77828821-77828840 | MS.gene71754:intron | 40.0% | |
| AATACCACTGAAATGGAGTC+AGG | - | chr1.1:77827978-77827997 | None:intergenic | 40.0% | |
| AATTGCTAGGCAGTTATGCA+TGG | + | chr1.1:77829238-77829257 | MS.gene71754:CDS | 40.0% | |
| ACACCAATCCCATGCTTATT+TGG | + | chr1.1:77832099-77832118 | MS.gene71754:intron | 40.0% | |
| AGAAACCATGACTCGACAAA+TGG | - | chr1.1:77831138-77831157 | None:intergenic | 40.0% | |
| AGAAACTACCGCTTATTAGC+TGG | + | chr1.1:77831284-77831303 | MS.gene71754:intron | 40.0% | |
| AGAGAATGTGCTACAAAGTG+AGG | - | chr1.1:77828251-77828270 | None:intergenic | 40.0% | |
| AGCATGTGAGAGGATATTCT+TGG | + | chr1.1:77831551-77831570 | MS.gene71754:intron | 40.0% | |
| AGCGCACCTTAGATTATTTC+TGG | + | chr1.1:77829028-77829047 | MS.gene71754:intron | 40.0% | |
| AGCTAATAAGCGGTAGTTTC+TGG | - | chr1.1:77831285-77831304 | None:intergenic | 40.0% | |
| ATAACAGTTCACGGTGTAGT+AGG | - | chr1.1:77832161-77832180 | None:intergenic | 40.0% | |
| ATAACTGCCTAGCAATTTCC+TGG | - | chr1.1:77829235-77829254 | None:intergenic | 40.0% | |
| ATAACTGTAATGCACGTACC+AGG | - | chr1.1:77829850-77829869 | None:intergenic | 40.0% | |
| ATATCCTGACTCCATTTCAG+TGG | + | chr1.1:77827971-77827990 | MS.gene71754:CDS | 40.0% | |
| ATGAGAGACTGCATAGAATC+TGG | - | chr1.1:77830910-77830929 | None:intergenic | 40.0% | |
| CAAATTCGAATCCCAGTGAT+GGG | - | chr1.1:77828610-77828629 | None:intergenic | 40.0% | |
| CAAGAATGAGAACGTAACGA+AGG | - | chr1.1:77828790-77828809 | None:intergenic | 40.0% | |
| CAGTAGTCATAGGACTAATC+TGG | + | chr1.1:77828402-77828421 | MS.gene71754:intron | 40.0% | |
| CGTAACGAAGGAGACAAATT+AGG | - | chr1.1:77828778-77828797 | None:intergenic | 40.0% | |
| CTCATATGGATTTGCAGACT+GGG | + | chr1.1:77830925-77830944 | MS.gene71754:CDS | 40.0% | |
| CTCGACAAATGGGTAAAGAT+AGG | - | chr1.1:77831127-77831146 | None:intergenic | 40.0% | |
| GAAACCATGACTCGACAAAT+GGG | - | chr1.1:77831137-77831156 | None:intergenic | 40.0% | |
| GAGAATGTGCTACAAAGTGA+GGG | - | chr1.1:77828250-77828269 | None:intergenic | 40.0% | |
| GGAATAGAGCTGCATTTGTT+GGG | - | chr1.1:77828589-77828608 | None:intergenic | 40.0% | |
| GTTAAGGGATAAGAAGTTGG+AGG | + | chr1.1:77828471-77828490 | MS.gene71754:intron | 40.0% | |
| GTTGCAAATGATGTTCAACC+AGG | + | chr1.1:77829214-77829233 | MS.gene71754:intron | 40.0% | |
| GTTTCTACATGAAGACCAAC+GGG | - | chr1.1:77831726-77831745 | None:intergenic | 40.0% | |
| TACAAAGTGAGGGACGAATT+TGG | - | chr1.1:77828240-77828259 | None:intergenic | 40.0% | |
| TAGATTATCCTCCCAGACTT+AGG | + | chr1.1:77830868-77830887 | MS.gene71754:intron | 40.0% | |
| TAGCACGGCTACCATAAATT+GGG | - | chr1.1:77829396-77829415 | None:intergenic | 40.0% | |
| TCATCACAAGCTGTAGTACT+AGG | + | chr1.1:77829812-77829831 | MS.gene71754:CDS | 40.0% | |
| TCTCATATGGATTTGCAGAC+TGG | + | chr1.1:77830924-77830943 | MS.gene71754:CDS | 40.0% | |
| TCTTTGTGTTGTAGGGAATG+TGG | + | chr1.1:77829478-77829497 | MS.gene71754:intron | 40.0% | |
| TGAGTTTGACCTATTTGCTC+TGG | + | chr1.1:77829534-77829553 | MS.gene71754:CDS | 40.0% | |
| TGCAAAAACGTATGCACTAC+AGG | - | chr1.1:77830484-77830503 | None:intergenic | 40.0% | |
| TGTTCAACCAGGAAATTGCT+AGG | + | chr1.1:77829225-77829244 | MS.gene71754:intron | 40.0% | |
| TTAGCACGGCTACCATAAAT+TGG | - | chr1.1:77829397-77829416 | None:intergenic | 40.0% | |
| TTCGCATACTACTTGGATTG+AGG | + | chr1.1:77830405-77830424 | MS.gene71754:intron | 40.0% | |
| TTCTTTAGTTGAAGCACACC+TGG | + | chr1.1:77831669-77831688 | MS.gene71754:intron | 40.0% | |
| TTGTAGTTACCTTTGCCGTT+TGG | + | chr1.1:77830184-77830203 | MS.gene71754:intron | 40.0% | |
| TTTACCCATTTGTCGAGTCA+TGG | + | chr1.1:77831130-77831149 | MS.gene71754:intron | 40.0% | |
| TTTCAACAGATGCTTGACAG+AGG | - | chr1.1:77830801-77830820 | None:intergenic | 40.0% | |
| ! | CAAGTATCCTTTTTATCCCG+AGG | + | chr1.1:77830339-77830358 | MS.gene71754:intron | 40.0% |
| ! | CAGATTAGTCCTATGACTAC+TGG | - | chr1.1:77828404-77828423 | None:intergenic | 40.0% |
| ! | CCCTTAACACATGGGTTATA+TGG | - | chr1.1:77831516-77831535 | None:intergenic | 40.0% |
| ! | GCTTTTAGTAACAGTCAGAG+GGG | - | chr1.1:77829579-77829598 | None:intergenic | 40.0% |
| ! | GTTTTCTCTCCCTTAACACA+TGG | - | chr1.1:77831525-77831544 | None:intergenic | 40.0% |
| ! | TGCAGTTTCAAAGTTTTCCC+GGG | - | chr1.1:77830958-77830977 | None:intergenic | 40.0% |
| !! | AGCTCAACTGGTTTGAGTTA+AGG | + | chr1.1:77828455-77828474 | MS.gene71754:intron | 40.0% |
| !! | CTTCAACAATGGATTAGCTC+GGG | + | chr1.1:77828887-77828906 | MS.gene71754:intron | 40.0% |
| !! | GATTGGTGTCAGATGATCAT+AGG | - | chr1.1:77832088-77832107 | None:intergenic | 40.0% |
| !! | GCTCAACTGGTTTGAGTTAA+GGG | + | chr1.1:77828456-77828475 | MS.gene71754:intron | 40.0% |
| AAAACAAACCGCAAGCTTGC+CGG | - | chr1.1:77827839-77827858 | None:intergenic | 45.0% | |
| AAACTGCTGTAGCATGTGAG+AGG | + | chr1.1:77831541-77831560 | MS.gene71754:intron | 45.0% | |
| AGTCATAGGACTAATCTGGG+AGG | + | chr1.1:77828406-77828425 | MS.gene71754:intron | 45.0% | |
| AGTCATGGTTTCTCCCTGTT+GGG | + | chr1.1:77831145-77831164 | MS.gene71754:intron | 45.0% | |
| ATAGGACTAATCTGGGAGGT+GGG | + | chr1.1:77828410-77828429 | MS.gene71754:intron | 45.0% | |
| ATGTGCAGAGGTAGTCGTAA+TGG | + | chr1.1:77832436-77832455 | MS.gene71754:intron | 45.0% | |
| CAACAAACTCGCCTAAGTCT+GGG | - | chr1.1:77830882-77830901 | None:intergenic | 45.0% | |
| CACTAACAGCCAGTAGTCAT+AGG | + | chr1.1:77828392-77828411 | MS.gene71754:intron | 45.0% | |
| CCAAATTCGAATCCCAGTGA+TGG | - | chr1.1:77828611-77828630 | None:intergenic | 45.0% | |
| CCAATCCCATGCTTATTTGG+TGG | + | chr1.1:77832102-77832121 | MS.gene71754:intron | 45.0% | |
| CCACCAAATAAGCATGGGAT+TGG | - | chr1.1:77832105-77832124 | None:intergenic | 45.0% | |
| CCATCACTGGGATTCGAATT+TGG | + | chr1.1:77828608-77828627 | MS.gene71754:intron | 45.0% | |
| GGGAATAGAGCTGCATTTGT+TGG | - | chr1.1:77828590-77828609 | None:intergenic | 45.0% | |
| TCAACAAACTCGCCTAAGTC+TGG | - | chr1.1:77830883-77830902 | None:intergenic | 45.0% | |
| TCAGCATGGTTCACTCCAAA+CGG | - | chr1.1:77830202-77830221 | None:intergenic | 45.0% | |
| TCATCTGCTGAACTGCATCA+GGG | + | chr1.1:77832243-77832262 | MS.gene71754:CDS | 45.0% | |
| TGAACTGCATCAGGGACTAA+AGG | + | chr1.1:77832251-77832270 | MS.gene71754:CDS | 45.0% | |
| TGTGCAGAGGTAGTCGTAAT+GGG | + | chr1.1:77832437-77832456 | MS.gene71754:intron | 45.0% | |
| TTCATCTGCTGAACTGCATC+AGG | + | chr1.1:77832242-77832261 | MS.gene71754:CDS | 45.0% | |
| ! | CGGTAGTTTCTGGAGAAGTA+TGG | - | chr1.1:77831275-77831294 | None:intergenic | 45.0% |
| ! | CTATCACTGCATAAGGTGCT+TGG | + | chr1.1:77830016-77830035 | MS.gene71754:intron | 45.0% |
| ACTGTAATGCACGTACCAGG+CGG | - | chr1.1:77829847-77829866 | None:intergenic | 50.0% | |
| ATTCCAGTTTGGGCTGTCTC+TGG | - | chr1.1:77830992-77831011 | None:intergenic | 50.0% | |
| ATTCTTCTTCTCGGTCCTCG+TGG | + | chr1.1:77827811-77827830 | MS.gene71754:CDS | 50.0% | |
| ATTGTTGCATGCTTCGGCGA+CGG | - | chr1.1:77827788-77827807 | None:intergenic | 50.0% | |
| CATAGGACTAATCTGGGAGG+TGG | + | chr1.1:77828409-77828428 | MS.gene71754:intron | 50.0% | |
| GAGTCATGGTTTCTCCCTGT+TGG | + | chr1.1:77831144-77831163 | MS.gene71754:intron | 50.0% | |
| GCAGCTCTATTCCCATCACT+GGG | + | chr1.1:77828596-77828615 | MS.gene71754:intron | 50.0% | |
| GCAGGATGCAGATCAGCTAT+TGG | + | chr1.1:77830079-77830098 | MS.gene71754:intron | 50.0% | |
| TAGCTGATCTGCATCCTGCA+TGG | - | chr1.1:77830078-77830097 | None:intergenic | 50.0% | |
| TGCAGCTCTATTCCCATCAC+TGG | + | chr1.1:77828595-77828614 | MS.gene71754:intron | 50.0% | |
| TGGTTCACTCCAAACGGCAA+AGG | - | chr1.1:77830196-77830215 | None:intergenic | 50.0% | |
| TTCAAACGCCTGCACACACA+TGG | - | chr1.1:77832136-77832155 | None:intergenic | 50.0% | |
| ACTAATCTGGGAGGTGGGTG+GGG | + | chr1.1:77828415-77828434 | MS.gene71754:intron | 55.0% | |
| CAAACTCGCCTAAGTCTGGG+AGG | - | chr1.1:77830879-77830898 | None:intergenic | 55.0% | |
| CATCCAGAGACAGCCCAAAC+TGG | + | chr1.1:77830986-77831005 | MS.gene71754:CDS | 55.0% | |
| GACTAATCTGGGAGGTGGGT+GGG | + | chr1.1:77828414-77828433 | MS.gene71754:intron | 55.0% | |
| TGCAGACTGGGTTTCTGTCC+CGG | + | chr1.1:77830937-77830956 | MS.gene71754:CDS | 55.0% | |
| !! | GTTGGGTTGGGTAGCTCAAC+TGG | + | chr1.1:77828443-77828462 | MS.gene71754:intron | 55.0% |
| ACTAGGCATTAGCTGCCGCC+TGG | + | chr1.1:77829829-77829848 | MS.gene71754:CDS | 60.0% | |
| CTAATCTGGGAGGTGGGTGG+GGG | + | chr1.1:77828416-77828435 | MS.gene71754:intron | 60.0% | |
| GCAGACTGGGTTTCTGTCCC+GGG | + | chr1.1:77830938-77830957 | MS.gene71754:CDS | 60.0% | |
| GGACTAATCTGGGAGGTGGG+TGG | + | chr1.1:77828413-77828432 | MS.gene71754:intron | 60.0% | |
| AGGTGGGTGGGGGTTGGGTT+GGG | + | chr1.1:77828426-77828445 | MS.gene71754:intron | 65.0% | |
| CTTCTCGGTCCTCGTGGCTC+CGG | + | chr1.1:77827817-77827836 | MS.gene71754:CDS | 65.0% | |
| TCGTGGCTCCGGCAAGCTTG+CGG | + | chr1.1:77827828-77827847 | MS.gene71754:CDS | 65.0% | |
| !! | GGTGGGGGTTGGGTTGGGTT+GGG | + | chr1.1:77828431-77828450 | MS.gene71754:intron | 65.0% |
| CTGGGAGGTGGGTGGGGGTT+GGG | + | chr1.1:77828421-77828440 | MS.gene71754:intron | 70.0% | |
| GAGGTGGGTGGGGGTTGGGT+TGG | + | chr1.1:77828425-77828444 | MS.gene71754:intron | 70.0% | |
| GCAAGCTTGCCGGAGCCACG+AGG | - | chr1.1:77827829-77827848 | None:intergenic | 70.0% | |
| TCTGGGAGGTGGGTGGGGGT+TGG | + | chr1.1:77828420-77828439 | MS.gene71754:intron | 70.0% | |
| !! | GGGTGGGGGTTGGGTTGGGT+TGG | + | chr1.1:77828430-77828449 | MS.gene71754:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 77827772 | 77832527 | 77827772 | ID=MS.gene71754 |
| chr1.1 | mRNA | 77827772 | 77832527 | 77827772 | ID=MS.gene71754.t1;Parent=MS.gene71754 |
| chr1.1 | exon | 77827772 | 77827849 | 77827772 | ID=MS.gene71754.t1.exon1;Parent=MS.gene71754.t1 |
| chr1.1 | CDS | 77827772 | 77827849 | 77827772 | ID=cds.MS.gene71754.t1;Parent=MS.gene71754.t1 |
| chr1.1 | exon | 77827936 | 77827992 | 77827936 | ID=MS.gene71754.t1.exon2;Parent=MS.gene71754.t1 |
| chr1.1 | CDS | 77827936 | 77827992 | 77827936 | ID=cds.MS.gene71754.t1;Parent=MS.gene71754.t1 |
| chr1.1 | exon | 77828111 | 77828158 | 77828111 | ID=MS.gene71754.t1.exon3;Parent=MS.gene71754.t1 |
| chr1.1 | CDS | 77828111 | 77828158 | 77828111 | ID=cds.MS.gene71754.t1;Parent=MS.gene71754.t1 |
| chr1.1 | exon | 77829236 | 77829286 | 77829236 | ID=MS.gene71754.t1.exon4;Parent=MS.gene71754.t1 |
| chr1.1 | CDS | 77829236 | 77829286 | 77829236 | ID=cds.MS.gene71754.t1;Parent=MS.gene71754.t1 |
| chr1.1 | exon | 77829374 | 77829417 | 77829374 | ID=MS.gene71754.t1.exon5;Parent=MS.gene71754.t1 |
| chr1.1 | CDS | 77829374 | 77829417 | 77829374 | ID=cds.MS.gene71754.t1;Parent=MS.gene71754.t1 |
| chr1.1 | exon | 77829492 | 77829555 | 77829492 | ID=MS.gene71754.t1.exon6;Parent=MS.gene71754.t1 |
| chr1.1 | CDS | 77829492 | 77829555 | 77829492 | ID=cds.MS.gene71754.t1;Parent=MS.gene71754.t1 |
| chr1.1 | exon | 77829764 | 77829850 | 77829764 | ID=MS.gene71754.t1.exon7;Parent=MS.gene71754.t1 |
| chr1.1 | CDS | 77829764 | 77829850 | 77829764 | ID=cds.MS.gene71754.t1;Parent=MS.gene71754.t1 |
| chr1.1 | exon | 77830083 | 77830174 | 77830083 | ID=MS.gene71754.t1.exon8;Parent=MS.gene71754.t1 |
| chr1.1 | CDS | 77830083 | 77830174 | 77830083 | ID=cds.MS.gene71754.t1;Parent=MS.gene71754.t1 |
| chr1.1 | exon | 77830260 | 77830341 | 77830260 | ID=MS.gene71754.t1.exon9;Parent=MS.gene71754.t1 |
| chr1.1 | CDS | 77830260 | 77830341 | 77830260 | ID=cds.MS.gene71754.t1;Parent=MS.gene71754.t1 |
| chr1.1 | exon | 77830740 | 77830825 | 77830740 | ID=MS.gene71754.t1.exon10;Parent=MS.gene71754.t1 |
| chr1.1 | CDS | 77830740 | 77830825 | 77830740 | ID=cds.MS.gene71754.t1;Parent=MS.gene71754.t1 |
| chr1.1 | exon | 77830911 | 77831020 | 77830911 | ID=MS.gene71754.t1.exon11;Parent=MS.gene71754.t1 |
| chr1.1 | CDS | 77830911 | 77831020 | 77830911 | ID=cds.MS.gene71754.t1;Parent=MS.gene71754.t1 |
| chr1.1 | exon | 77831781 | 77831873 | 77831781 | ID=MS.gene71754.t1.exon12;Parent=MS.gene71754.t1 |
| chr1.1 | CDS | 77831781 | 77831873 | 77831781 | ID=cds.MS.gene71754.t1;Parent=MS.gene71754.t1 |
| chr1.1 | exon | 77831947 | 77832011 | 77831947 | ID=MS.gene71754.t1.exon13;Parent=MS.gene71754.t1 |
| chr1.1 | CDS | 77831947 | 77832011 | 77831947 | ID=cds.MS.gene71754.t1;Parent=MS.gene71754.t1 |
| chr1.1 | exon | 77832147 | 77832290 | 77832147 | ID=MS.gene71754.t1.exon14;Parent=MS.gene71754.t1 |
| chr1.1 | CDS | 77832147 | 77832290 | 77832147 | ID=cds.MS.gene71754.t1;Parent=MS.gene71754.t1 |
| chr1.1 | exon | 77832492 | 77832527 | 77832492 | ID=MS.gene71754.t1.exon15;Parent=MS.gene71754.t1 |
| chr1.1 | CDS | 77832492 | 77832527 | 77832492 | ID=cds.MS.gene71754.t1;Parent=MS.gene71754.t1 |
| Gene Sequence |
| Protein sequence |
