Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61736.t1 | XP_003609791.2 | 95.1 | 801 | 15 | 1 | 146 | 922 | 129 | 929 | 0.00E+00 | 1500.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61736.t1 | B8BKI8 | 75.1 | 814 | 165 | 6 | 145 | 920 | 146 | 959 | 0.0e+00 | 1186.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61736.t1 | G7JNY1 | 95.1 | 801 | 15 | 1 | 146 | 922 | 129 | 929 | 0.0e+00 | 1500.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene061182 | MS.gene61736 | 0.98019 | 1.19E-149 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61736.t1 | MTR_4g122270 | 95.131 | 801 | 15 | 1 | 146 | 922 | 129 | 929 | 0.0 | 1573 |
| MS.gene61736.t1 | MTR_4g116870 | 33.180 | 654 | 358 | 12 | 233 | 831 | 35 | 664 | 9.28e-99 | 326 |
| MS.gene61736.t1 | MTR_4g096700 | 38.346 | 532 | 271 | 12 | 336 | 812 | 109 | 638 | 4.05e-96 | 320 |
| MS.gene61736.t1 | MTR_4g071090 | 31.960 | 607 | 343 | 9 | 255 | 812 | 154 | 739 | 7.09e-93 | 313 |
| MS.gene61736.t1 | MTR_7g109480 | 35.606 | 528 | 281 | 9 | 321 | 812 | 131 | 635 | 1.11e-92 | 309 |
| MS.gene61736.t1 | MTR_8g090000 | 32.090 | 670 | 357 | 12 | 227 | 820 | 10 | 657 | 7.59e-90 | 304 |
| MS.gene61736.t1 | MTR_7g100680 | 30.046 | 659 | 351 | 20 | 248 | 816 | 67 | 705 | 6.00e-83 | 285 |
| MS.gene61736.t1 | MTR_2g009190 | 32.626 | 613 | 341 | 15 | 271 | 832 | 41 | 632 | 6.24e-82 | 278 |
| MS.gene61736.t1 | MTR_2g437540 | 43.713 | 334 | 165 | 5 | 494 | 827 | 349 | 659 | 2.88e-73 | 258 |
| MS.gene61736.t1 | MTR_2g437540 | 23.750 | 240 | 176 | 3 | 223 | 457 | 7 | 244 | 1.51e-15 | 82.0 |
| MS.gene61736.t1 | MTR_1g069140 | 43.646 | 181 | 84 | 5 | 1 | 169 | 1 | 175 | 2.35e-33 | 130 |
| MS.gene61736.t1 | MTR_1g069140 | 49.231 | 130 | 60 | 3 | 11 | 140 | 24 | 147 | 9.09e-29 | 117 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61736.t1 | AT1G44900 | 75.312 | 802 | 160 | 7 | 146 | 917 | 135 | 928 | 0.0 | 1193 |
| MS.gene61736.t1 | AT1G44900 | 75.312 | 802 | 160 | 7 | 146 | 917 | 133 | 926 | 0.0 | 1192 |
| MS.gene61736.t1 | AT2G16440 | 33.229 | 638 | 356 | 9 | 224 | 812 | 128 | 744 | 4.15e-100 | 332 |
| MS.gene61736.t1 | AT5G46280 | 38.697 | 522 | 265 | 11 | 343 | 812 | 112 | 630 | 6.59e-97 | 320 |
| MS.gene61736.t1 | AT5G46280 | 38.697 | 522 | 265 | 11 | 343 | 812 | 112 | 630 | 3.26e-96 | 320 |
| MS.gene61736.t1 | AT5G46280 | 39.216 | 510 | 255 | 11 | 343 | 800 | 112 | 618 | 9.94e-95 | 311 |
| MS.gene61736.t1 | AT2G07690 | 33.025 | 648 | 353 | 12 | 236 | 828 | 34 | 655 | 2.30e-93 | 311 |
| MS.gene61736.t1 | AT2G07690 | 33.127 | 646 | 353 | 12 | 236 | 828 | 34 | 653 | 9.54e-93 | 309 |
| MS.gene61736.t1 | AT4G02060 | 35.539 | 529 | 282 | 10 | 335 | 827 | 143 | 648 | 1.85e-90 | 303 |
| MS.gene61736.t1 | AT4G02060 | 35.539 | 529 | 282 | 10 | 335 | 827 | 143 | 648 | 1.85e-90 | 303 |
| MS.gene61736.t1 | AT3G09660 | 32.595 | 632 | 335 | 20 | 270 | 816 | 76 | 701 | 1.84e-85 | 290 |
| MS.gene61736.t1 | AT3G09660 | 32.750 | 629 | 335 | 20 | 270 | 816 | 76 | 698 | 2.58e-85 | 291 |
| MS.gene61736.t1 | AT5G46280 | 40.175 | 458 | 222 | 10 | 343 | 751 | 112 | 566 | 4.57e-85 | 284 |
| MS.gene61736.t1 | AT3G09660 | 32.595 | 632 | 335 | 20 | 270 | 816 | 76 | 701 | 4.81e-85 | 290 |
| MS.gene61736.t1 | AT2G14050 | 33.333 | 537 | 302 | 12 | 332 | 832 | 117 | 633 | 1.11e-78 | 269 |
| MS.gene61736.t1 | AT2G14050 | 33.333 | 537 | 302 | 12 | 332 | 832 | 117 | 633 | 1.46e-78 | 269 |
| MS.gene61736.t1 | AT5G44635 | 45.317 | 331 | 157 | 5 | 494 | 820 | 349 | 659 | 4.28e-74 | 261 |
| MS.gene61736.t1 | AT5G44635 | 28.188 | 149 | 106 | 1 | 319 | 466 | 104 | 252 | 2.81e-14 | 77.8 |
| MS.gene61736.t1 | AT5G44635 | 45.317 | 331 | 157 | 5 | 494 | 820 | 349 | 659 | 5.35e-74 | 261 |
| MS.gene61736.t1 | AT5G44635 | 28.188 | 149 | 106 | 1 | 319 | 466 | 104 | 252 | 2.81e-14 | 77.8 |
Find 0 sgRNAs with CRISPR-Local
Find 358 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GATTATTATTATTATTTGTA+TGG | + | 32478:5162-5181 | MS.gene61736:intron | 10.0% |
| !!! | TATCTTGTTATTTTATTTAT+GGG | + | 32478:2218-2237 | MS.gene61736:intron | 10.0% |
| !! | AACAACAACAAATAATTAAA+TGG | - | 32478:3762-3781 | MS.gene61736:intergenic | 15.0% |
| !! | ATAATGACTTATAAAGTATA+AGG | + | 32478:1939-1958 | MS.gene61736:intron | 15.0% |
| !! | ATATTCTGATAAAAAATTTC+AGG | + | 32478:3504-3523 | MS.gene61736:intron | 15.0% |
| !!! | AACAAATTATAGAACTTTTT+TGG | + | 32478:3201-3220 | MS.gene61736:intron | 15.0% |
| !!! | ATCTTGTTATTTTATTTATG+GGG | + | 32478:2219-2238 | MS.gene61736:intron | 15.0% |
| !!! | CAGTTTTAGTAATAATTAAA+GGG | + | 32478:857-876 | MS.gene61736:intron | 15.0% |
| !!! | CTATCTTGTTATTTTATTTA+TGG | + | 32478:2217-2236 | MS.gene61736:intron | 15.0% |
| !!! | TCAGTTTTAGTAATAATTAA+AGG | + | 32478:856-875 | MS.gene61736:intron | 15.0% |
| !! | AAATATCGAATCTTCAAAAA+TGG | - | 32478:1467-1486 | MS.gene61736:intergenic | 20.0% |
| !! | AACAATAATCAACATGAATT+AGG | - | 32478:3115-3134 | MS.gene61736:intergenic | 20.0% |
| !! | ACACTAAGATAAATATTATC+AGG | + | 32478:4318-4337 | MS.gene61736:intron | 20.0% |
| !! | CAAAAAATTGAATCAAAACT+TGG | - | 32478:340-359 | MS.gene61736:intergenic | 20.0% |
| !! | CACTAAGATAAATATTATCA+GGG | + | 32478:4319-4338 | MS.gene61736:intron | 20.0% |
| !! | CGTTATAGAAATAATCTATA+TGG | - | 32478:1718-1737 | MS.gene61736:intergenic | 20.0% |
| !! | TAAAAAAATGCCAAAAGAAA+AGG | - | 32478:5475-5494 | MS.gene61736:intergenic | 20.0% |
| !! | TCAAGAAGATAAAATAAAGA+TGG | - | 32478:315-334 | MS.gene61736:intergenic | 20.0% |
| !! | TTCTTTATCCAATTCAAAAT+TGG | - | 32478:5895-5914 | MS.gene61736:intergenic | 20.0% |
| !! | TTTCAACTAAAATCAAATAG+CGG | - | 32478:762-781 | MS.gene61736:intergenic | 20.0% |
| !! | TTTGTGACTAAATAAATTGA+CGG | + | 32478:3228-3247 | MS.gene61736:intron | 20.0% |
| !!! | AAGTTTTGCAAAATAAGTTA+AGG | + | 32478:3071-3090 | MS.gene61736:intron | 20.0% |
| !!! | ACAAAAGAGATTGAAATTTT+GGG | + | 32478:3668-3687 | MS.gene61736:intron | 20.0% |
| !!! | AGGCTTCTTTTAATTTTTAA+TGG | + | 32478:3998-4017 | MS.gene61736:intron | 20.0% |
| !!! | CATTTTGTAATTATTTTGTG+TGG | + | 32478:809-828 | MS.gene61736:intron | 20.0% |
| !!! | GAATAAGAATTCTGAAAAAA+CGG | - | 32478:2950-2969 | MS.gene61736:intergenic | 20.0% |
| !!! | TAACTTATTTTGCAAAACTT+TGG | - | 32478:3071-3090 | MS.gene61736:intergenic | 20.0% |
| !!! | TAATTATTTGTTGTTGTTGA+TGG | + | 32478:3764-3783 | MS.gene61736:intron | 20.0% |
| !!! | TTACAAATTACCTTTTCTTT+TGG | + | 32478:5462-5481 | MS.gene61736:intron | 20.0% |
| !!! | TTATTTTATTTATGGGGTTA+TGG | + | 32478:2225-2244 | MS.gene61736:intron | 20.0% |
| !!! | TTTTTTTCCTATAGTTAAAC+CGG | - | 32478:1145-1164 | MS.gene61736:intergenic | 20.0% |
| ! | AAAAGACACAATAAATTAGC+TGG | - | 32478:2499-2518 | MS.gene61736:intergenic | 25.0% |
| ! | AAATACATCTTGAAGTTCTA+AGG | - | 32478:3726-3745 | MS.gene61736:intergenic | 25.0% |
| ! | AAATCACTATAGTAATGTGA+TGG | - | 32478:5503-5522 | MS.gene61736:intergenic | 25.0% |
| ! | AAGAAGCCTATAAATAACAA+AGG | - | 32478:3987-4006 | MS.gene61736:intergenic | 25.0% |
| ! | AATAAGCTGAAAACAGTTTA+TGG | + | 32478:1644-1663 | MS.gene61736:intron | 25.0% |
| ! | ATAATCATAGTAGTCAATAG+CGG | + | 32478:647-666 | MS.gene61736:intron | 25.0% |
| ! | ATACAGTTTGAAAGAACTAA+TGG | - | 32478:1688-1707 | MS.gene61736:intergenic | 25.0% |
| ! | ATATCGAAACGAGAAATAAT+AGG | - | 32478:4648-4667 | MS.gene61736:intergenic | 25.0% |
| ! | ATCTACTTTGATATCTACAT+GGG | - | 32478:5718-5737 | MS.gene61736:intergenic | 25.0% |
| ! | CAGTTAGAAAACAAACATAA+AGG | - | 32478:5771-5790 | MS.gene61736:intergenic | 25.0% |
| ! | CATACACATATATATTCTGA+CGG | - | 32478:931-950 | MS.gene61736:intergenic | 25.0% |
| ! | CTATACTATAGACAATTTAC+AGG | + | 32478:3289-3308 | MS.gene61736:intron | 25.0% |
| ! | GAAAAAAATTTCATCGACAA+AGG | + | 32478:1157-1176 | MS.gene61736:CDS | 25.0% |
| ! | GAATGATAATCTTTCTTACT+TGG | - | 32478:286-305 | MS.gene61736:intergenic | 25.0% |
| ! | GAGATACTTAGATTTATTGT+TGG | + | 32478:1901-1920 | MS.gene61736:intron | 25.0% |
| ! | TACCTTAAATTGATGTTTAC+AGG | - | 32478:4925-4944 | MS.gene61736:intergenic | 25.0% |
| ! | TGAATACAATGATTCGAATT+GGG | + | 32478:2840-2859 | MS.gene61736:CDS | 25.0% |
| ! | TTCGAATCATTGTATTCAAA+TGG | - | 32478:2838-2857 | MS.gene61736:intergenic | 25.0% |
| ! | TTCTGATAAAAAATTTCAGG+AGG | + | 32478:3507-3526 | MS.gene61736:intron | 25.0% |
| ! | TTGAATACAATGATTCGAAT+TGG | + | 32478:2839-2858 | MS.gene61736:CDS | 25.0% |
| !! | GACAAAAGAGATTGAAATTT+TGG | + | 32478:3667-3686 | MS.gene61736:intron | 25.0% |
| !! | TTCAAATGCCAATTTTGAAT+TGG | + | 32478:5884-5903 | MS.gene61736:CDS | 25.0% |
| !! | TTTTCAGAATTCTTATTCAG+AGG | + | 32478:2952-2971 | MS.gene61736:CDS | 25.0% |
| !! | TTTTGCAAAATAAGTTAAGG+AGG | + | 32478:3074-3093 | MS.gene61736:intron | 25.0% |
| !!! | ACCTATCCTTTGTTATTTAT+AGG | + | 32478:3978-3997 | MS.gene61736:intron | 25.0% |
| !!! | ACTATTAGTTTTTCATCCAA+TGG | - | 32478:2792-2811 | MS.gene61736:intergenic | 25.0% |
| !!! | ATTACTATAGTGATTTTGAC+TGG | + | 32478:5507-5526 | MS.gene61736:intron | 25.0% |
| !!! | ATTACTTCTAAAACAGAATG+AGG | - | 32478:2609-2628 | MS.gene61736:intergenic | 25.0% |
| !!! | CTACTTTGACTTGTTTATAT+TGG | + | 32478:3445-3464 | MS.gene61736:intron | 25.0% |
| !!! | TCATTCTGTTTTAGAAGTAA+TGG | + | 32478:2608-2627 | MS.gene61736:CDS | 25.0% |
| !!! | TTATGTTTGTTTTCTAACTG+AGG | + | 32478:5771-5790 | MS.gene61736:intron | 25.0% |
| !!! | TTGCAAATGCTATGTTTTTT+AGG | + | 32478:1764-1783 | MS.gene61736:intron | 25.0% |
| !!! | TTTTCAACAAGTTTTGTAGT+TGG | + | 32478:2453-2472 | MS.gene61736:intron | 25.0% |
| !!! | TTTTTTCCTATAGTTAAACC+GGG | - | 32478:1144-1163 | MS.gene61736:intergenic | 25.0% |
| AAAACCATTCTTTGTGTTCA+AGG | - | 32478:3566-3585 | MS.gene61736:intergenic | 30.0% | |
| AAATGAGGATGATCAATATG+AGG | + | 32478:2144-2163 | MS.gene61736:CDS | 30.0% | |
| AACTTGTAATTACTGTTGTG+TGG | + | 32478:588-607 | MS.gene61736:intron | 30.0% | |
| AATACAATGATTCGAATTGG+GGG | + | 32478:2842-2861 | MS.gene61736:CDS | 30.0% | |
| AATGCTCTTCTCCTAAAATT+CGG | + | 32478:5554-5573 | MS.gene61736:intron | 30.0% | |
| AATTGCAGAAACTTTCTTCT+TGG | - | 32478:416-435 | MS.gene61736:intergenic | 30.0% | |
| ACGATTATTCTTAAAACTCG+CGG | - | 32478:904-923 | MS.gene61736:intergenic | 30.0% | |
| ACTAGTGTTAATTACCTTGA+AGG | - | 32478:5748-5767 | MS.gene61736:intergenic | 30.0% | |
| ATTGCAGAAACTTTCTTCTT+GGG | - | 32478:415-434 | MS.gene61736:intergenic | 30.0% | |
| CAAGTATGTGGTTAAAAAAC+AGG | + | 32478:504-523 | MS.gene61736:CDS | 30.0% | |
| CATCTACTTTGATATCTACA+TGG | - | 32478:5719-5738 | MS.gene61736:intergenic | 30.0% | |
| CTATTGAATGAACATGGATT+AGG | + | 32478:1821-1840 | MS.gene61736:intron | 30.0% | |
| GAATACAATGATTCGAATTG+GGG | + | 32478:2841-2860 | MS.gene61736:CDS | 30.0% | |
| GACATAAATGTTCTTCTTCT+TGG | + | 32478:3916-3935 | MS.gene61736:CDS | 30.0% | |
| GCCTATAAATAACAAAGGAT+AGG | - | 32478:3982-4001 | MS.gene61736:intergenic | 30.0% | |
| GTACAACTATTGAATGAACA+TGG | + | 32478:1815-1834 | MS.gene61736:intron | 30.0% | |
| GTCAAGAAAAGAATGTTGAA+GGG | + | 32478:3875-3894 | MS.gene61736:CDS | 30.0% | |
| GTCAGATATGTTGAAAAAAC+TGG | + | 32478:4057-4076 | MS.gene61736:intron | 30.0% | |
| TAAGAAATCCTTGAATTTCC+TGG | - | 32478:2352-2371 | MS.gene61736:intergenic | 30.0% | |
| TATTGTTCTTCACTTTGACT+TGG | + | 32478:3128-3147 | MS.gene61736:intron | 30.0% | |
| TCATTTCTACCCAAAAGTTT+GGG | + | 32478:5360-5379 | MS.gene61736:CDS | 30.0% | |
| TGAAATCACAAGGATTTGAA+AGG | - | 32478:3046-3065 | MS.gene61736:intergenic | 30.0% | |
| TGCCTGTAAACATCAATTTA+AGG | + | 32478:4920-4939 | MS.gene61736:intron | 30.0% | |
| TGTTCAATATTGACAGTGAA+CGG | - | 32478:3016-3035 | MS.gene61736:intergenic | 30.0% | |
| TTATCAGACATTATCTCACT+AGG | + | 32478:5922-5941 | MS.gene61736:CDS | 30.0% | |
| TTATTTCCATAACCACTACA+GGG | - | 32478:1629-1648 | MS.gene61736:intergenic | 30.0% | |
| TTCATTTCTACCCAAAAGTT+TGG | + | 32478:5359-5378 | MS.gene61736:CDS | 30.0% | |
| TTCGTTAAGTAAAAAGAGAC+AGG | - | 32478:5131-5150 | MS.gene61736:intergenic | 30.0% | |
| TTGTGAAAATAACCACTACA+GGG | - | 32478:1532-1551 | MS.gene61736:intergenic | 30.0% | |
| TTTCATCCAATGGAAGATAT+GGG | - | 32478:2782-2801 | MS.gene61736:intergenic | 30.0% | |
| TTTGAATTGGATAAAGAACG+AGG | + | 32478:5897-5916 | MS.gene61736:CDS | 30.0% | |
| ! | AACTACTGATTACTGATATG+TGG | + | 32478:4526-4545 | MS.gene61736:intron | 30.0% |
| ! | CAATATCAAGACCGAATTTT+AGG | - | 32478:5568-5587 | MS.gene61736:intergenic | 30.0% |
| ! | GATTGAGTTCTTGATTTTAC+AGG | + | 32478:4738-4757 | MS.gene61736:intron | 30.0% |
| ! | TTTTCATCCAATGGAAGATA+TGG | - | 32478:2783-2802 | MS.gene61736:intergenic | 30.0% |
| !! | AACTTTGGTTTGAAATCACA+AGG | - | 32478:3056-3075 | MS.gene61736:intergenic | 30.0% |
| !! | GACAAAGGAAAATTTTGATC+TGG | + | 32478:1172-1191 | MS.gene61736:CDS | 30.0% |
| !!! | ATGCTTATTTTAAGCGAGTT+GGG | + | 32478:1876-1895 | MS.gene61736:intron | 30.0% |
| !!! | ATTTTTTGTTTCTGTAGCTG+CGG | + | 32478:352-371 | MS.gene61736:intron | 30.0% |
| !!! | CCTGCTTTTGAAATTTGATA+GGG | + | 32478:1290-1309 | MS.gene61736:intron | 30.0% |
| !!! | TATGCTTATTTTAAGCGAGT+TGG | + | 32478:1875-1894 | MS.gene61736:intron | 30.0% |
| !!! | TCCTGCTTTTGAAATTTGAT+AGG | + | 32478:1289-1308 | MS.gene61736:intron | 30.0% |
| AAAAAATTTCAGGAGGTCAC+AGG | + | 32478:3514-3533 | MS.gene61736:intron | 35.0% | |
| AAATATGCTGCTGTTGAAGA+AGG | - | 32478:5865-5884 | MS.gene61736:intergenic | 35.0% | |
| AACAAACCCTTTCTCCAATT+CGG | - | 32478:3703-3722 | MS.gene61736:intergenic | 35.0% | |
| AAGAAGATGAAGTCTTGGTT+TGG | - | 32478:4480-4499 | MS.gene61736:intergenic | 35.0% | |
| AAGTCTCCATGTTCATTCTT+TGG | - | 32478:2390-2409 | MS.gene61736:intergenic | 35.0% | |
| AATATGCTGCTGTTGAAGAA+GGG | - | 32478:5864-5883 | MS.gene61736:intergenic | 35.0% | |
| AATGTTACAATCTCTTCTCC+AGG | - | 32478:3423-3442 | MS.gene61736:intergenic | 35.0% | |
| ACACATATATATTCTGACGG+TGG | - | 32478:928-947 | MS.gene61736:intergenic | 35.0% | |
| AGCATAAGCATATCAAAAGC+TGG | + | 32478:4371-4390 | MS.gene61736:CDS | 35.0% | |
| AGTATCACTTCCTTGTATCT+CGG | - | 32478:3372-3391 | MS.gene61736:intergenic | 35.0% | |
| AGTCTCCATGTTCATTCTTT+GGG | - | 32478:2389-2408 | MS.gene61736:intergenic | 35.0% | |
| ATGACCAGATTCGAAATATC+AGG | + | 32478:2724-2743 | MS.gene61736:CDS | 35.0% | |
| ATGCTCATTTATATTCTCCG+TGG | + | 32478:5633-5652 | MS.gene61736:CDS | 35.0% | |
| ATTTGACAAGATGAATGACC+AGG | + | 32478:4224-4243 | MS.gene61736:CDS | 35.0% | |
| CATTTCTACCCAAAAGTTTG+GGG | + | 32478:5361-5380 | MS.gene61736:CDS | 35.0% | |
| CCCTATCAAATTTCAAAAGC+AGG | - | 32478:1293-1312 | MS.gene61736:intergenic | 35.0% | |
| CTTATTTCCATAACCACTAC+AGG | - | 32478:1630-1649 | MS.gene61736:intergenic | 35.0% | |
| CTTGTGAAAATAACCACTAC+AGG | - | 32478:1533-1552 | MS.gene61736:intergenic | 35.0% | |
| GAAGGTAAGCAAATATGCAA+GGG | + | 32478:4453-4472 | MS.gene61736:intron | 35.0% | |
| GGCACATTGAATCAATGATA+AGG | + | 32478:5249-5268 | MS.gene61736:CDS | 35.0% | |
| GGTCAAGAAAAGAATGTTGA+AGG | + | 32478:3874-3893 | MS.gene61736:CDS | 35.0% | |
| GGTTTCTAATTGAACTCTGT+TGG | + | 32478:4568-4587 | MS.gene61736:intron | 35.0% | |
| GTACTTCTTCAACAGATCTT+GGG | - | 32478:5005-5024 | MS.gene61736:intergenic | 35.0% | |
| GTTACCTGATATTTCGAATC+TGG | - | 32478:2731-2750 | MS.gene61736:intergenic | 35.0% | |
| GTTCACTGTCAATATTGAAC+AGG | + | 32478:3015-3034 | MS.gene61736:CDS | 35.0% | |
| TACTTCTTCAACAGATCTTG+GGG | - | 32478:5004-5023 | MS.gene61736:intergenic | 35.0% | |
| TCAAGGAACTCTTAGAGAAT+GGG | + | 32478:2296-2315 | MS.gene61736:CDS | 35.0% | |
| TCCAACTACTGATCAAAATG+AGG | + | 32478:2129-2148 | MS.gene61736:CDS | 35.0% | |
| TCTTATTCAGAGGTGAAAGT+TGG | + | 32478:2962-2981 | MS.gene61736:CDS | 35.0% | |
| TGAACTTTGTATTGCAGACA+CGG | + | 32478:1979-1998 | MS.gene61736:intron | 35.0% | |
| TGAATTTCCTGGCTATGAAA+CGG | - | 32478:2341-2360 | MS.gene61736:intergenic | 35.0% | |
| TGACAAAGAAGATGAAGTCT+TGG | - | 32478:4485-4504 | MS.gene61736:intergenic | 35.0% | |
| TGCAAAATAAGTTAAGGAGG+AGG | + | 32478:3077-3096 | MS.gene61736:intron | 35.0% | |
| TGCTCATTTATATTCTCCGT+GGG | + | 32478:5634-5653 | MS.gene61736:CDS | 35.0% | |
| TTCAACTGTGTATGACTTCT+TGG | + | 32478:1315-1334 | MS.gene61736:CDS | 35.0% | |
| TTCAAGGAACTCTTAGAGAA+TGG | + | 32478:2295-2314 | MS.gene61736:CDS | 35.0% | |
| TTGTCCTTGAACACAAAGAA+TGG | + | 32478:3559-3578 | MS.gene61736:CDS | 35.0% | |
| TTTATGGGGTTATGGAATGT+AGG | + | 32478:2233-2252 | MS.gene61736:intron | 35.0% | |
| TTTCATAGCCAGGAAATTCA+AGG | + | 32478:2341-2360 | MS.gene61736:CDS | 35.0% | |
| TTTCGAATCTGGTCATAAAC+TGG | - | 32478:2720-2739 | MS.gene61736:intergenic | 35.0% | |
| ! | ATAATTTGCCTCAACAACAG+TGG | - | 32478:3599-3618 | MS.gene61736:intergenic | 35.0% |
| ! | ATCTATTTTCTTACCGATCC+TGG | - | 32478:4245-4264 | MS.gene61736:intergenic | 35.0% |
| ! | GACTTGTTTATATTGGTCGT+GGG | + | 32478:3452-3471 | MS.gene61736:intron | 35.0% |
| !! | CAATGTTTTGAGTCATGATC+CGG | - | 32478:382-401 | MS.gene61736:intergenic | 35.0% |
| !! | TAATCTTTCTTACTTGGTGC+AGG | - | 32478:280-299 | MS.gene61736:intergenic | 35.0% |
| !! | TCCTCATTTTGATCAGTAGT+TGG | - | 32478:2133-2152 | MS.gene61736:intergenic | 35.0% |
| !! | TGACTTGTTTATATTGGTCG+TGG | + | 32478:3451-3470 | MS.gene61736:intron | 35.0% |
| !!! | AGGATTTTGATGATGAAGCT+GGG | + | 32478:2256-2275 | MS.gene61736:CDS | 35.0% |
| !!! | TCTGTGACTCAAAGCTTTTT+TGG | + | 32478:4961-4980 | MS.gene61736:intron | 35.0% |
| !!! | TGCTTATTTTAAGCGAGTTG+GGG | + | 32478:1877-1896 | MS.gene61736:intron | 35.0% |
| !!! | TTTTTTAGGCAACTTCACTC+TGG | + | 32478:1778-1797 | MS.gene61736:intron | 35.0% |
| AAATCAAATAGCGGCTGAAG+CGG | - | 32478:753-772 | MS.gene61736:intergenic | 40.0% | |
| AAATCAGCGTCATGTAACCT+TGG | - | 32478:5055-5074 | MS.gene61736:intergenic | 40.0% | |
| AAGGTCACAAAGACACTCAA+GGG | + | 32478:2099-2118 | MS.gene61736:CDS | 40.0% | |
| AAGTATGACTGTGGCAAATG+TGG | + | 32478:2911-2930 | MS.gene61736:CDS | 40.0% | |
| AATCAGCGTCATGTAACCTT+GGG | - | 32478:5054-5073 | MS.gene61736:intergenic | 40.0% | |
| AATTCTTCTGCCGAATAACC+TGG | + | 32478:432-451 | MS.gene61736:CDS | 40.0% | |
| ACAAACCCTTTCTCCAATTC+GGG | - | 32478:3702-3721 | MS.gene61736:intergenic | 40.0% | |
| ACAAGATGAATGACCAGGAT+CGG | + | 32478:4229-4248 | MS.gene61736:CDS | 40.0% | |
| ACATTACCTTCACAATGCAG+AGG | - | 32478:4671-4690 | MS.gene61736:intergenic | 40.0% | |
| ACCAAAGATTGATGGAGCAA+TGG | - | 32478:3812-3831 | MS.gene61736:intergenic | 40.0% | |
| ACTGTGTATGACTTCTTGGA+TGG | + | 32478:1319-1338 | MS.gene61736:CDS | 40.0% | |
| ACTTGTCCCAATCATCTCTT+GGG | - | 32478:489-508 | MS.gene61736:intergenic | 40.0% | |
| AGATGATTGGGACAAGTATG+TGG | + | 32478:492-511 | MS.gene61736:CDS | 40.0% | |
| AGGAATTTAGTAAGGACCTC+TGG | - | 32478:4895-4914 | MS.gene61736:intergenic | 40.0% | |
| AGTAGATGATCTCTCCTTCA+AGG | + | 32478:5731-5750 | MS.gene61736:CDS | 40.0% | |
| AGTATGACTGTGGCAAATGT+GGG | + | 32478:2912-2931 | MS.gene61736:CDS | 40.0% | |
| ATACTTCACCTGTTGCAACA+GGG | - | 32478:2897-2916 | MS.gene61736:intergenic | 40.0% | |
| ATAGTTGCCTTATATCGAGC+AGG | + | 32478:2807-2826 | MS.gene61736:intron | 40.0% | |
| CAAGTGACAATGATCTTGAC+GGG | + | 32478:2059-2078 | MS.gene61736:CDS | 40.0% | |
| CACTTCAAGTCACAACCTAA+GGG | + | 32478:4814-4833 | MS.gene61736:CDS | 40.0% | |
| CATTTGGAAGACATTCTCAC+TGG | + | 32478:5675-5694 | MS.gene61736:CDS | 40.0% | |
| CCAAGTGACAATGATCTTGA+CGG | + | 32478:2058-2077 | MS.gene61736:CDS | 40.0% | |
| CCTTGGGAAAACATTCAACT+TGG | - | 32478:5038-5057 | MS.gene61736:intergenic | 40.0% | |
| CGTAACCAATGCTTTGCATT+TGG | + | 32478:5659-5678 | MS.gene61736:CDS | 40.0% | |
| CGTACTTCTTCAACAGATCT+TGG | - | 32478:5006-5025 | MS.gene61736:intergenic | 40.0% | |
| CTGATAAGCAAAATGGTGTC+AGG | + | 32478:2423-2442 | MS.gene61736:CDS | 40.0% | |
| CTGGTCATAAACTGGTAAGT+TGG | - | 32478:2712-2731 | MS.gene61736:intergenic | 40.0% | |
| GAAGAATTCTGTCACAGATC+AGG | + | 32478:532-551 | MS.gene61736:CDS | 40.0% | |
| GAGTCATTATTAGCACCCTT+AGG | - | 32478:4832-4851 | MS.gene61736:intergenic | 40.0% | |
| GATTTGCGAATAAGATACGC+CGG | - | 32478:1065-1084 | MS.gene61736:intergenic | 40.0% | |
| GGAAGGTAAGCAAATATGCA+AGG | + | 32478:4452-4471 | MS.gene61736:intron | 40.0% | |
| GGAATTTAGTAAGGACCTCT+GGG | - | 32478:4894-4913 | MS.gene61736:intergenic | 40.0% | |
| GGATATATCACAATTCGCTC+TGG | + | 32478:1842-1861 | MS.gene61736:intron | 40.0% | |
| GGCATTCATGGAATTTGTAC+TGG | + | 32478:5528-5547 | MS.gene61736:intron | 40.0% | |
| GGTTCTTGAACCAGGTTATT+CGG | - | 32478:445-464 | MS.gene61736:intergenic | 40.0% | |
| GTCAACCCAAAGAATGAACA+TGG | + | 32478:2381-2400 | MS.gene61736:CDS | 40.0% | |
| GTCTTCCAAATGCAAAGCAT+TGG | - | 32478:5667-5686 | MS.gene61736:intergenic | 40.0% | |
| TACACTCCCATATCTTCCAT+TGG | + | 32478:2773-2792 | MS.gene61736:intron | 40.0% | |
| TACTTGTCCCAATCATCTCT+TGG | - | 32478:490-509 | MS.gene61736:intergenic | 40.0% | |
| TATGAGATGTACCGTGTTCA+AGG | + | 32478:2279-2298 | MS.gene61736:CDS | 40.0% | |
| TCAACAACAGTGGAAAACAC+TGG | - | 32478:3589-3608 | MS.gene61736:intergenic | 40.0% | |
| TCAATGTGCCTTACAGCAAT+GGG | - | 32478:5239-5258 | MS.gene61736:intergenic | 40.0% | |
| TCACTTCAAGTCACAACCTA+AGG | + | 32478:4813-4832 | MS.gene61736:CDS | 40.0% | |
| TCATCGTGACCAAAGATTGA+TGG | - | 32478:3820-3839 | MS.gene61736:intergenic | 40.0% | |
| TCCATTGCTCCATCAATCTT+TGG | + | 32478:3808-3827 | MS.gene61736:CDS | 40.0% | |
| TCCTATAGTTAAACCGGGTA+CGG | - | 32478:1139-1158 | MS.gene61736:intergenic | 40.0% | |
| TGGAATTGTCACATCTCTTC+AGG | + | 32478:4391-4410 | MS.gene61736:CDS | 40.0% | |
| TGTAGCTAACAAGTGCAGTT+TGG | + | 32478:2521-2540 | MS.gene61736:intron | 40.0% | |
| TGTATATGCAGAACTGCAGA+AGG | + | 32478:5090-5109 | MS.gene61736:CDS | 40.0% | |
| TGTGCGTCTGATAAGCAAAA+TGG | + | 32478:2416-2435 | MS.gene61736:CDS | 40.0% | |
| TTACCTTCCTCCAATTGGAT+TGG | - | 32478:4441-4460 | MS.gene61736:intergenic | 40.0% | |
| TTCAATGTGCCTTACAGCAA+TGG | - | 32478:5240-5259 | MS.gene61736:intergenic | 40.0% | |
| TTGACCTCCAAACATAGCTA+AGG | - | 32478:3860-3879 | MS.gene61736:intergenic | 40.0% | |
| TTTCATAAGCTACCCTGTAG+TGG | + | 32478:1517-1536 | MS.gene61736:intron | 40.0% | |
| TTTGCTTACCTTCCTCCAAT+TGG | - | 32478:4446-4465 | MS.gene61736:intergenic | 40.0% | |
| ! | AGTGTTTTCCACTGTTGTTG+AGG | + | 32478:3588-3607 | MS.gene61736:CDS | 40.0% |
| ! | ATAGCCTTAGCTATGTTTGG+AGG | + | 32478:3853-3872 | MS.gene61736:CDS | 40.0% |
| ! | CTCTAAGAGTTCCTTGAACA+CGG | - | 32478:2293-2312 | MS.gene61736:intergenic | 40.0% |
| ! | GCAATAGCCTTAGCTATGTT+TGG | + | 32478:3850-3869 | MS.gene61736:CDS | 40.0% |
| ! | TCTCTTGTTTAGCACGAACA+AGG | + | 32478:5209-5228 | MS.gene61736:intron | 40.0% |
| ! | TGGGAGTGTAATACATCAGT+TGG | - | 32478:2763-2782 | MS.gene61736:intergenic | 40.0% |
| ! | TTTCTGCACCCCAAACTTTT+GGG | - | 32478:5372-5391 | MS.gene61736:intergenic | 40.0% |
| !! | CCAAGTTGAATGTTTTCCCA+AGG | + | 32478:5035-5054 | MS.gene61736:CDS | 40.0% |
| !!! | GAGGATTTTGATGATGAAGC+TGG | + | 32478:2255-2274 | MS.gene61736:CDS | 40.0% |
| !!! | GTGATTTTGACTGGCATTCA+TGG | + | 32478:5516-5535 | MS.gene61736:intron | 40.0% |
| AAACCCTTTCTCCAATTCGG+GGG | - | 32478:3700-3719 | MS.gene61736:intergenic | 45.0% | |
| AAGATCCAGTCACAAGGGAA+TGG | + | 32478:4145-4164 | MS.gene61736:CDS | 45.0% | |
| AAGCTACCCTGTAGTGGTTA+TGG | + | 32478:1523-1542 | MS.gene61736:intron | 45.0% | |
| ACAGACGAGGATGAGGAATT+TGG | + | 32478:1089-1108 | MS.gene61736:CDS | 45.0% | |
| ACAGTTACAGGCCCTCTAAA+AGG | + | 32478:2008-2027 | MS.gene61736:CDS | 45.0% | |
| ACGATTAGTGTAGCGGTTTG+TGG | - | 32478:673-692 | MS.gene61736:intergenic | 45.0% | |
| AGCTAGCCAAATGGCAATGT+TGG | - | 32478:2580-2599 | MS.gene61736:intergenic | 45.0% | |
| ATGGACACAGAGATGAGTGT+TGG | + | 32478:1338-1357 | MS.gene61736:CDS | 45.0% | |
| ATGGGGTTATGGAATGTAGG+AGG | + | 32478:2236-2255 | MS.gene61736:intron | 45.0% | |
| ATTGCTGCTGCCAATCCAAT+TGG | + | 32478:4428-4447 | MS.gene61736:CDS | 45.0% | |
| CAAACCCTTTCTCCAATTCG+GGG | - | 32478:3701-3720 | MS.gene61736:intergenic | 45.0% | |
| CAACAGGTGAAGTATGACTG+TGG | + | 32478:2902-2921 | MS.gene61736:CDS | 45.0% | |
| CAATGTGCCTTACAGCAATG+GGG | - | 32478:5238-5257 | MS.gene61736:intergenic | 45.0% | |
| CAGACAGCATGTCATACAAG+AGG | + | 32478:5301-5320 | MS.gene61736:CDS | 45.0% | |
| CATACAAGAGGATGTGGACA+TGG | + | 32478:5313-5332 | MS.gene61736:CDS | 45.0% | |
| CATACTTCACCTGTTGCAAC+AGG | - | 32478:2898-2917 | MS.gene61736:intergenic | 45.0% | |
| CCACAAAGATCCAGTCACAA+GGG | + | 32478:4140-4159 | MS.gene61736:CDS | 45.0% | |
| CCGTCAAGATCATTGTCACT+TGG | - | 32478:2061-2080 | MS.gene61736:intergenic | 45.0% | |
| CCTATAGTTAAACCGGGTAC+GGG | - | 32478:1138-1157 | MS.gene61736:intergenic | 45.0% | |
| CGATATCCTCTGCATTGTGA+AGG | + | 32478:4662-4681 | MS.gene61736:CDS | 45.0% | |
| CTATAGTTAAACCGGGTACG+GGG | - | 32478:1137-1156 | MS.gene61736:intergenic | 45.0% | |
| CTGTATACACCACTGGCAAA+GGG | + | 32478:4088-4107 | MS.gene61736:CDS | 45.0% | |
| CTTGTCCCAATCATCTCTTG+GGG | - | 32478:488-507 | MS.gene61736:intergenic | 45.0% | |
| GAAGGTCACAAAGACACTCA+AGG | + | 32478:2098-2117 | MS.gene61736:CDS | 45.0% | |
| GAATTCTGTCACAGATCAGG+AGG | + | 32478:535-554 | MS.gene61736:CDS | 45.0% | |
| GCAAGCATTTCATCAGTGAC+TGG | - | 32478:4775-4794 | MS.gene61736:intergenic | 45.0% | |
| GCAGCAATTTCTCTCGGTAT+TGG | - | 32478:466-485 | MS.gene61736:intergenic | 45.0% | |
| GCAGCAGCAGGAATTTAGTA+AGG | - | 32478:4903-4922 | MS.gene61736:intergenic | 45.0% | |
| GCATGTCATACAAGAGGATG+TGG | + | 32478:5307-5326 | MS.gene61736:CDS | 45.0% | |
| GCTAGCCAAATGGCAATGTT+GGG | - | 32478:2579-2598 | MS.gene61736:intergenic | 45.0% | |
| GGATGAATAGTTCACCTGGA+AGG | + | 32478:2080-2099 | MS.gene61736:CDS | 45.0% | |
| GGTAAGTATCCATGAAGCCA+TGG | + | 32478:4340-4359 | MS.gene61736:CDS | 45.0% | |
| GTATGACTGTGGCAAATGTG+GGG | + | 32478:2913-2932 | MS.gene61736:CDS | 45.0% | |
| GTCTTCCTGTGTAAGTTCGT+AGG | - | 32478:3650-3669 | MS.gene61736:intergenic | 45.0% | |
| TAAGTTCGTAGGCAGAGAAG+AGG | - | 32478:3639-3658 | MS.gene61736:intergenic | 45.0% | |
| TACTTCACCTGTTGCAACAG+GGG | - | 32478:2896-2915 | MS.gene61736:intergenic | 45.0% | |
| TATAGTTAAACCGGGTACGG+GGG | - | 32478:1136-1155 | MS.gene61736:intergenic | 45.0% | |
| TCCACAAAGATCCAGTCACA+AGG | + | 32478:4139-4158 | MS.gene61736:CDS | 45.0% | |
| TCCATCCCAACATTGCCATT+TGG | + | 32478:2571-2590 | MS.gene61736:CDS | 45.0% | |
| TCCTCTGTCAGCTAGAACAA+GGG | - | 32478:4187-4206 | MS.gene61736:intergenic | 45.0% | |
| TGTATACACCACTGGCAAAG+GGG | + | 32478:4089-4108 | MS.gene61736:CDS | 45.0% | |
| TGTCCCGAGTGTCAATCAAA+AGG | + | 32478:2989-3008 | MS.gene61736:CDS | 45.0% | |
| TTCCTCTGTCAGCTAGAACA+AGG | - | 32478:4188-4207 | MS.gene61736:intergenic | 45.0% | |
| ! | ATGTGATAGCGACGAGATAG+CGG | + | 32478:707-726 | MS.gene61736:intron | 45.0% |
| ! | CAGTTACAGGCCCTCTAAAA+GGG | + | 32478:2009-2028 | MS.gene61736:CDS | 45.0% |
| ! | CTTTCTGCACCCCAAACTTT+TGG | - | 32478:5373-5392 | MS.gene61736:intergenic | 45.0% |
| ! | GTTCTTCTTCTTGGTGATCC+AGG | + | 32478:3925-3944 | MS.gene61736:CDS | 45.0% |
| !! | AATCGAGACTTTGCTGTTCC+TGG | - | 32478:3946-3965 | MS.gene61736:intergenic | 45.0% |
| !! | ACAGAGATGAGTGTTGGTCA+AGG | + | 32478:1344-1363 | MS.gene61736:CDS | 45.0% |
| !! | CGGTCCTTTTGATTGACACT+CGG | - | 32478:2996-3015 | MS.gene61736:intergenic | 45.0% |
| !! | GGTCCTTTTGATTGACACTC+GGG | - | 32478:2995-3014 | MS.gene61736:intergenic | 45.0% |
| !! | TCGGTATTGGTTCTTGAACC+AGG | - | 32478:453-472 | MS.gene61736:intergenic | 45.0% |
| !! | TTTTGATTGACACTCGGGAC+AGG | - | 32478:2990-3009 | MS.gene61736:intergenic | 45.0% |
| !!! | GTCGTTTTGTTTGACACTGC+AGG | + | 32478:5809-5828 | MS.gene61736:intron | 45.0% |
| !! | ATTATTATTATTATTTGTAT+GGG | + | 32478:5163-5182 | MS.gene61736:intron | 5.0% |
| AAGACCCCCGAATTGGAGAA+AGG | + | 32478:3693-3712 | MS.gene61736:intron | 50.0% | |
| AAGGAGTCCCCATTGCTGTA+AGG | + | 32478:5228-5247 | MS.gene61736:CDS | 50.0% | |
| ACAAGGGAATGGACCCTTGA+GGG | + | 32478:4156-4175 | MS.gene61736:CDS | 50.0% | |
| ACACGGACGATGACAGTTAC+AGG | + | 32478:1996-2015 | MS.gene61736:CDS | 50.0% | |
| ACTTCACCTGTTGCAACAGG+GGG | - | 32478:2895-2914 | MS.gene61736:intergenic | 50.0% | |
| AGAAGACCTGTGATCAGCTC+TGG | - | 32478:2035-2054 | MS.gene61736:intergenic | 50.0% | |
| AGACCCCCGAATTGGAGAAA+GGG | + | 32478:3694-3713 | MS.gene61736:intron | 50.0% | |
| AGGTGCATCAGCTAGCCAAA+TGG | - | 32478:2589-2608 | MS.gene61736:intergenic | 50.0% | |
| CAGAGAGCTGTATACACCAC+TGG | + | 32478:4081-4100 | MS.gene61736:CDS | 50.0% | |
| CCCGTACCCGGTTTAACTAT+AGG | + | 32478:1135-1154 | MS.gene61736:CDS | 50.0% | |
| CCCTTGTGACTGGATCTTTG+TGG | - | 32478:4143-4162 | MS.gene61736:intergenic | 50.0% | |
| CGCTACACTAATCGTCGTAG+CGG | + | 32478:678-697 | MS.gene61736:intron | 50.0% | |
| CGCTACGACGATTAGTGTAG+CGG | - | 32478:680-699 | MS.gene61736:intergenic | 50.0% | |
| CTCTGCCTACGAACTTACAC+AGG | + | 32478:3642-3661 | MS.gene61736:intron | 50.0% | |
| CTGCCAATCCAATTGGAGGA+AGG | + | 32478:4435-4454 | MS.gene61736:CDS | 50.0% | |
| CTTGGGGCAGCAATTTCTCT+CGG | - | 32478:472-491 | MS.gene61736:intergenic | 50.0% | |
| GACGGGATGAATAGTTCACC+TGG | + | 32478:2076-2095 | MS.gene61736:CDS | 50.0% | |
| GAGTGTCTTTGTGACCTTCC+AGG | - | 32478:2097-2116 | MS.gene61736:intergenic | 50.0% | |
| GCCAAATGGCAATGTTGGGA+TGG | - | 32478:2575-2594 | MS.gene61736:intergenic | 50.0% | |
| GCTGTATACACCACTGGCAA+AGG | + | 32478:4087-4106 | MS.gene61736:CDS | 50.0% | |
| GGATCTGCCTGCTCGATATA+AGG | - | 32478:2817-2836 | MS.gene61736:intergenic | 50.0% | |
| GTCACAAAGACACTCAAGGG+AGG | + | 32478:2102-2121 | MS.gene61736:CDS | 50.0% | |
| TCAGAAGCTATCGCTGTCGA+GGG | + | 32478:1033-1052 | MS.gene61736:intron | 50.0% | |
| TGATGTTTACAGGCAGCAGC+AGG | - | 32478:4915-4934 | MS.gene61736:intergenic | 50.0% | |
| TGCTGCCCCAAGAGATGATT+GGG | + | 32478:480-499 | MS.gene61736:CDS | 50.0% | |
| TGGCATGCCAGATGCATCTT+CGG | - | 32478:4866-4885 | MS.gene61736:intergenic | 50.0% | |
| TTCAGAAGCTATCGCTGTCG+AGG | + | 32478:1032-1051 | MS.gene61736:intron | 50.0% | |
| TTCCTCATCCTCGTCTGTGT+CGG | - | 32478:1087-1106 | MS.gene61736:intergenic | 50.0% | |
| TTGCTGCCCCAAGAGATGAT+TGG | + | 32478:479-498 | MS.gene61736:CDS | 50.0% | |
| TTTCTGTAGCTGCGGTCTTC+CGG | + | 32478:360-379 | MS.gene61736:intron | 50.0% | |
| ! | AGTTTTCCCCCTGTTGCAAC+AGG | + | 32478:2886-2905 | MS.gene61736:CDS | 50.0% |
| ! | GAAGGGAAGCATAGACTACG+AGG | + | 32478:3892-3911 | MS.gene61736:CDS | 50.0% |
| ! | GGCAAATGTGGGGCAGTTTT+GGG | + | 32478:2923-2942 | MS.gene61736:CDS | 50.0% |
| ! | TCTGAGATGCATTCGCGCAT+GGG | - | 32478:5285-5304 | MS.gene61736:intergenic | 50.0% |
| ! | TGGCAAATGTGGGGCAGTTT+TGG | + | 32478:2922-2941 | MS.gene61736:CDS | 50.0% |
| !! | AAGCATTGGTTACGAGCCCA+CGG | - | 32478:5653-5672 | MS.gene61736:intergenic | 50.0% |
| !! | ATCAGCTCTGGCCCTTTTAG+AGG | - | 32478:2023-2042 | MS.gene61736:intergenic | 50.0% |
| !! | GGTGCAGAAAGCACTGCAAA+AGG | + | 32478:5382-5401 | MS.gene61736:CDS | 50.0% |
| !! | GTCCTGCAGGAAGTATTCCA+GGG | - | 32478:3344-3363 | MS.gene61736:intergenic | 50.0% |
| !! | TCAGCTCTGGCCCTTTTAGA+GGG | - | 32478:2022-2041 | MS.gene61736:intergenic | 50.0% |
| AAAGGGCCAGAGCTGATCAC+AGG | + | 32478:2026-2045 | MS.gene61736:CDS | 55.0% | |
| AAGGGAATGGACCCTTGAGG+GGG | + | 32478:4158-4177 | MS.gene61736:CDS | 55.0% | |
| AAGTGCGCCGTTTCATAGCC+AGG | + | 32478:2331-2350 | MS.gene61736:CDS | 55.0% | |
| AGCCCTGGAATACTTCCTGC+AGG | + | 32478:3339-3358 | MS.gene61736:CDS | 55.0% | |
| AGCGAGTCCGAAGATGCATC+TGG | + | 32478:4856-4875 | MS.gene61736:CDS | 55.0% | |
| AGGACGACTGCCGAGATACA+AGG | + | 32478:3359-3378 | MS.gene61736:CDS | 55.0% | |
| AGGGTCCATTCCCTTGTGAC+TGG | - | 32478:4153-4172 | MS.gene61736:intergenic | 55.0% | |
| ATCCGACACAGACGAGGATG+AGG | + | 32478:1082-1101 | MS.gene61736:CDS | 55.0% | |
| CAAGGGAATGGACCCTTGAG+GGG | + | 32478:4157-4176 | MS.gene61736:CDS | 55.0% | |
| CACAAGGGAATGGACCCTTG+AGG | + | 32478:4155-4174 | MS.gene61736:CDS | 55.0% | |
| CACTAATCGTCGTAGCGGTG+CGG | + | 32478:683-702 | MS.gene61736:intron | 55.0% | |
| CAGAAGCTATCGCTGTCGAG+GGG | + | 32478:1034-1053 | MS.gene61736:intron | 55.0% | |
| CTCACTCTTCAAGAGAGCCC+TGG | + | 32478:3324-3343 | MS.gene61736:CDS | 55.0% | |
| CTGATTGACTGTGCTCGACC+TGG | + | 32478:3402-3421 | MS.gene61736:CDS | 55.0% | |
| GCTGCTGCCAATCCAATTGG+AGG | + | 32478:4431-4450 | MS.gene61736:CDS | 55.0% | |
| GCTTATGCTCTGCTGCTCCA+TGG | - | 32478:4360-4379 | MS.gene61736:intergenic | 55.0% | |
| GGAGTTGTAACCAGACGCTC+TGG | + | 32478:2863-2882 | MS.gene61736:CDS | 55.0% | |
| GTAAGGACCTCTGGGTCAGT+TGG | - | 32478:4886-4905 | MS.gene61736:intergenic | 55.0% | |
| GTCACAGATCAGGAGGAGTC+AGG | + | 32478:542-561 | MS.gene61736:CDS | 55.0% | |
| TCGCAAATCCGACACAGACG+AGG | + | 32478:1076-1095 | MS.gene61736:CDS | 55.0% | |
| TCGCTGTCGAGGGGATATTC+CGG | + | 32478:1043-1062 | MS.gene61736:CDS | 55.0% | |
| TCTGCTGCTCCATGGCTTCA+TGG | - | 32478:4352-4371 | MS.gene61736:intergenic | 55.0% | |
| TTGGGCAAAGACCCCCGAAT+TGG | + | 32478:3686-3705 | MS.gene61736:intron | 55.0% | |
| ! | GCCCTTGTTCTAGCTGACAG+AGG | + | 32478:4183-4202 | MS.gene61736:CDS | 55.0% |
| ! | GTCTGAGATGCATTCGCGCA+TGG | - | 32478:5286-5305 | MS.gene61736:intergenic | 55.0% |
| ! | TGATAGCGACGAGATAGCGG+TGG | + | 32478:710-729 | MS.gene61736:intron | 55.0% |
| !! | CGTCCTGCAGGAAGTATTCC+AGG | - | 32478:3345-3364 | MS.gene61736:intergenic | 55.0% |
| AACAAGGGCTCCCCCCTCAA+GGG | - | 32478:4172-4191 | MS.gene61736:intergenic | 60.0% | |
| AGCAGAAGCCCCTTTGCCAG+TGG | - | 32478:4100-4119 | MS.gene61736:intergenic | 60.0% | |
| AGGGAATGGACCCTTGAGGG+GGG | + | 32478:4159-4178 | MS.gene61736:CDS | 60.0% | |
| CGGTGGAGCAGAGCAGATAG+CGG | + | 32478:727-746 | MS.gene61736:intron | 60.0% | |
| GGCAAAGGGGCTTCTGCTGT+GGG | + | 32478:4102-4121 | MS.gene61736:CDS | 60.0% | |
| TATCTCGGCAGTCGTCCTGC+AGG | - | 32478:3357-3376 | MS.gene61736:intergenic | 60.0% | |
| TGCATCTTCGGACTCGCTCG+CGG | - | 32478:4854-4873 | MS.gene61736:intergenic | 60.0% | |
| TGGCAAAGGGGCTTCTGCTG+TGG | + | 32478:4101-4120 | MS.gene61736:CDS | 60.0% | |
| TGGCATGCCAACTGACCCAG+AGG | + | 32478:4876-4895 | MS.gene61736:CDS | 60.0% | |
| ! | GGGGAAAACTCCAGAGCGTC+TGG | - | 32478:2876-2895 | MS.gene61736:intergenic | 60.0% |
| GAACAAGGGCTCCCCCCTCA+AGG | - | 32478:4173-4192 | MS.gene61736:intergenic | 65.0% | |
| CGCAGTACGACCCCCGTACC+CGG | + | 32478:1123-1142 | MS.gene61736:CDS | 70.0% | |
| GGTACGGGGGTCGTACTGCG+TGG | - | 32478:1123-1142 | MS.gene61736:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 32478 | gene | 258 | 5947 | 258 | ID=MS.gene61736 |
| 32478 | mRNA | 258 | 5947 | 258 | ID=MS.gene61736.t1;Parent=MS.gene61736 |
| 32478 | exon | 258 | 286 | 258 | ID=MS.gene61736.t1.exon1;Parent=MS.gene61736.t1 |
| 32478 | CDS | 258 | 286 | 258 | ID=cds.MS.gene61736.t1;Parent=MS.gene61736.t1 |
| 32478 | exon | 369 | 563 | 369 | ID=MS.gene61736.t1.exon2;Parent=MS.gene61736.t1 |
| 32478 | CDS | 369 | 563 | 369 | ID=cds.MS.gene61736.t1;Parent=MS.gene61736.t1 |
| 32478 | exon | 1037 | 1193 | 1037 | ID=MS.gene61736.t1.exon3;Parent=MS.gene61736.t1 |
| 32478 | CDS | 1037 | 1193 | 1037 | ID=cds.MS.gene61736.t1;Parent=MS.gene61736.t1 |
| 32478 | exon | 1311 | 1365 | 1311 | ID=MS.gene61736.t1.exon4;Parent=MS.gene61736.t1 |
| 32478 | CDS | 1311 | 1365 | 1311 | ID=cds.MS.gene61736.t1;Parent=MS.gene61736.t1 |
| 32478 | exon | 1996 | 2165 | 1996 | ID=MS.gene61736.t1.exon5;Parent=MS.gene61736.t1 |
| 32478 | CDS | 1996 | 2165 | 1996 | ID=cds.MS.gene61736.t1;Parent=MS.gene61736.t1 |
| 32478 | exon | 2255 | 2444 | 2255 | ID=MS.gene61736.t1.exon6;Parent=MS.gene61736.t1 |
| 32478 | CDS | 2255 | 2444 | 2255 | ID=cds.MS.gene61736.t1;Parent=MS.gene61736.t1 |
| 32478 | exon | 2526 | 2745 | 2526 | ID=MS.gene61736.t1.exon7;Parent=MS.gene61736.t1 |
| 32478 | CDS | 2526 | 2745 | 2526 | ID=cds.MS.gene61736.t1;Parent=MS.gene61736.t1 |
| 32478 | exon | 2829 | 3036 | 2829 | ID=MS.gene61736.t1.exon8;Parent=MS.gene61736.t1 |
| 32478 | CDS | 2829 | 3036 | 2829 | ID=cds.MS.gene61736.t1;Parent=MS.gene61736.t1 |
| 32478 | exon | 3300 | 3434 | 3300 | ID=MS.gene61736.t1.exon9;Parent=MS.gene61736.t1 |
| 32478 | CDS | 3300 | 3434 | 3300 | ID=cds.MS.gene61736.t1;Parent=MS.gene61736.t1 |
| 32478 | exon | 3526 | 3645 | 3526 | ID=MS.gene61736.t1.exon10;Parent=MS.gene61736.t1 |
| 32478 | CDS | 3526 | 3645 | 3526 | ID=cds.MS.gene61736.t1;Parent=MS.gene61736.t1 |
| 32478 | exon | 3799 | 3971 | 3799 | ID=MS.gene61736.t1.exon11;Parent=MS.gene61736.t1 |
| 32478 | CDS | 3799 | 3971 | 3799 | ID=cds.MS.gene61736.t1;Parent=MS.gene61736.t1 |
| 32478 | exon | 4062 | 4250 | 4062 | ID=MS.gene61736.t1.exon12;Parent=MS.gene61736.t1 |
| 32478 | CDS | 4062 | 4250 | 4062 | ID=cds.MS.gene61736.t1;Parent=MS.gene61736.t1 |
| 32478 | exon | 4340 | 4456 | 4340 | ID=MS.gene61736.t1.exon13;Parent=MS.gene61736.t1 |
| 32478 | CDS | 4340 | 4456 | 4340 | ID=cds.MS.gene61736.t1;Parent=MS.gene61736.t1 |
| 32478 | exon | 4599 | 4683 | 4599 | ID=MS.gene61736.t1.exon14;Parent=MS.gene61736.t1 |
| 32478 | CDS | 4599 | 4683 | 4599 | ID=cds.MS.gene61736.t1;Parent=MS.gene61736.t1 |
| 32478 | exon | 4760 | 4897 | 4760 | ID=MS.gene61736.t1.exon15;Parent=MS.gene61736.t1 |
| 32478 | CDS | 4760 | 4897 | 4760 | ID=cds.MS.gene61736.t1;Parent=MS.gene61736.t1 |
| 32478 | exon | 4995 | 5120 | 4995 | ID=MS.gene61736.t1.exon16;Parent=MS.gene61736.t1 |
| 32478 | CDS | 4995 | 5120 | 4995 | ID=cds.MS.gene61736.t1;Parent=MS.gene61736.t1 |
| 32478 | exon | 5221 | 5403 | 5221 | ID=MS.gene61736.t1.exon17;Parent=MS.gene61736.t1 |
| 32478 | CDS | 5221 | 5403 | 5221 | ID=cds.MS.gene61736.t1;Parent=MS.gene61736.t1 |
| 32478 | exon | 5591 | 5752 | 5591 | ID=MS.gene61736.t1.exon18;Parent=MS.gene61736.t1 |
| 32478 | CDS | 5591 | 5752 | 5591 | ID=cds.MS.gene61736.t1;Parent=MS.gene61736.t1 |
| 32478 | exon | 5831 | 5947 | 5831 | ID=MS.gene61736.t1.exon19;Parent=MS.gene61736.t1 |
| 32478 | CDS | 5831 | 5947 | 5831 | ID=cds.MS.gene61736.t1;Parent=MS.gene61736.t1 |
| Gene Sequence |
| Protein sequence |
