Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72534.t1 | XP_013455379.1 | 87.3 | 629 | 66 | 2 | 1 | 625 | 1 | 619 | 3.70E-295 | 1024.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72534.t1 | A4FUF0 | 40.0 | 90 | 49 | 3 | 324 | 413 | 10 | 94 | 4.8e-09 | 65.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72534.t1 | A0A072UU80 | 87.3 | 629 | 66 | 2 | 1 | 625 | 1 | 619 | 2.6e-295 | 1024.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene045233 | MS.gene72534 | PPI |
| MS.gene72534 | MS.gene007196 | PPI |
| MS.gene79130 | MS.gene72534 | PPI |
| MS.gene72534 | MS.gene55120 | PPI |
| MS.gene95527 | MS.gene72534 | PPI |
| MS.gene07741 | MS.gene72534 | PPI |
| MS.gene46640 | MS.gene72534 | PPI |
| MS.gene24697 | MS.gene72534 | PPI |
| MS.gene050299 | MS.gene72534 | PPI |
| MS.gene72534 | MS.gene045235 | PPI |
| MS.gene92710 | MS.gene72534 | PPI |
| MS.gene72534 | MS.gene037044 | PPI |
| MS.gene77911 | MS.gene72534 | PPI |
| MS.gene067033 | MS.gene72534 | PPI |
| MS.gene75575 | MS.gene72534 | PPI |
| MS.gene045232 | MS.gene72534 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72534.t1 | MTR_4g036445 | 86.688 | 631 | 70 | 2 | 1 | 627 | 1 | 621 | 0.0 | 1116 |
| MS.gene72534.t1 | MTR_1g049120 | 62.008 | 966 | 250 | 16 | 15 | 919 | 8 | 917 | 0.0 | 1075 |
| MS.gene72534.t1 | MTR_2g047912 | 76.271 | 413 | 89 | 3 | 509 | 921 | 275 | 678 | 0.0 | 625 |
| MS.gene72534.t1 | MTR_2g047912 | 57.455 | 275 | 71 | 4 | 23 | 261 | 13 | 277 | 9.74e-79 | 270 |
| MS.gene72534.t1 | MTR_1g072780 | 50.290 | 690 | 289 | 18 | 258 | 919 | 310 | 973 | 0.0 | 594 |
| MS.gene72534.t1 | MTR_2g104120 | 32.800 | 625 | 351 | 18 | 320 | 921 | 258 | 836 | 3.53e-82 | 283 |
| MS.gene72534.t1 | MTR_1g066890 | 39.249 | 293 | 130 | 7 | 317 | 609 | 315 | 559 | 1.16e-54 | 205 |
| MS.gene72534.t1 | MTR_1g066890 | 36.970 | 165 | 93 | 3 | 758 | 921 | 758 | 912 | 1.11e-21 | 101 |
| MS.gene72534.t1 | MTR_2g104980 | 58.252 | 103 | 42 | 1 | 320 | 422 | 233 | 334 | 4.10e-36 | 143 |
| MS.gene72534.t1 | MTR_6g005840 | 35.484 | 186 | 116 | 4 | 319 | 503 | 271 | 453 | 9.41e-26 | 114 |
| MS.gene72534.t1 | MTR_6g005840 | 35.484 | 186 | 116 | 4 | 319 | 503 | 229 | 411 | 1.28e-25 | 114 |
| MS.gene72534.t1 | MTR_6g005960 | 35.484 | 186 | 116 | 4 | 319 | 503 | 211 | 393 | 1.99e-24 | 110 |
| MS.gene72534.t1 | MTR_7g113180 | 33.735 | 166 | 95 | 4 | 320 | 477 | 87 | 245 | 8.39e-22 | 102 |
| MS.gene72534.t1 | MTR_2g013200 | 53.636 | 110 | 23 | 5 | 55 | 163 | 63 | 145 | 3.16e-19 | 85.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72534.t1 | AT5G02950 | 32.143 | 616 | 299 | 17 | 323 | 909 | 98 | 623 | 4.21e-75 | 259 |
| MS.gene72534.t1 | AT5G02950 | 32.143 | 616 | 299 | 17 | 323 | 909 | 98 | 623 | 4.21e-75 | 259 |
| MS.gene72534.t1 | AT3G09670 | 51.813 | 193 | 91 | 2 | 319 | 510 | 196 | 387 | 2.22e-56 | 208 |
| MS.gene72534.t1 | AT3G09670 | 51.813 | 193 | 91 | 2 | 319 | 510 | 196 | 387 | 2.22e-56 | 208 |
| MS.gene72534.t1 | AT3G54760 | 37.342 | 316 | 167 | 6 | 602 | 916 | 457 | 742 | 2.05e-43 | 170 |
| MS.gene72534.t1 | AT3G54760 | 37.342 | 316 | 167 | 6 | 602 | 916 | 488 | 773 | 2.37e-43 | 170 |
| MS.gene72534.t1 | AT5G40340 | 39.888 | 178 | 101 | 6 | 320 | 495 | 125 | 298 | 5.46e-27 | 119 |
| MS.gene72534.t1 | AT5G40340 | 39.888 | 178 | 101 | 6 | 320 | 495 | 125 | 298 | 6.97e-27 | 118 |
| MS.gene72534.t1 | AT5G27650 | 33.155 | 187 | 115 | 6 | 320 | 499 | 171 | 354 | 4.87e-21 | 100 |
| MS.gene72534.t1 | AT3G05430 | 33.333 | 159 | 99 | 3 | 320 | 474 | 133 | 288 | 3.02e-20 | 97.4 |
| MS.gene72534.t1 | AT3G05430 | 33.333 | 159 | 99 | 3 | 320 | 474 | 133 | 288 | 3.13e-20 | 97.4 |
| MS.gene72534.t1 | AT3G27860 | 31.797 | 217 | 128 | 8 | 291 | 497 | 27 | 233 | 4.56e-16 | 83.2 |
| MS.gene72534.t1 | AT3G27860 | 31.797 | 217 | 128 | 8 | 291 | 497 | 27 | 233 | 4.56e-16 | 83.2 |
Find 189 sgRNAs with CRISPR-Local
Find 239 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTCACAAAGTTGTATTTC+TGG | 0.189172 | 4.1:-62955168 | None:intergenic |
| TTCTTTCTCTGATATGGTTT+GGG | 0.192247 | 4.1:+62954621 | MS.gene72534:CDS |
| TGCTATTTCGTTGCGTATTT+TGG | 0.192293 | 4.1:+62954733 | MS.gene72534:CDS |
| ACAAATCCATCGTTTAAAAT+TGG | 0.229699 | 4.1:+62955555 | MS.gene72534:CDS |
| AAGATATGAGTGACTCAAAT+TGG | 0.253085 | 4.1:+62955925 | MS.gene72534:CDS |
| GTCTCAAGACGAGTCGAATA+TGG | 0.258530 | 4.1:+62954883 | MS.gene72534:CDS |
| TTTCTTTCTCTGATATGGTT+TGG | 0.268068 | 4.1:+62954620 | MS.gene72534:CDS |
| AACCATATGTTTAGGCGTTT+TGG | 0.275299 | 4.1:+62956215 | MS.gene72534:CDS |
| GGTGATTCTGTTAAGGGTGC+TGG | 0.281698 | 4.1:+62953552 | MS.gene72534:CDS |
| CTCCTTCTCTTGGAATGTTC+AGG | 0.288105 | 4.1:-62955453 | None:intergenic |
| AACAAGTTCATCAACAATAT+TGG | 0.293875 | 4.1:-62953805 | None:intergenic |
| GAACAGACCGCAAAGGTTAA+AGG | 0.321406 | 4.1:+62953987 | MS.gene72534:CDS |
| CAATCACCGTCTCGAGAATC+TGG | 0.323985 | 4.1:-62955405 | None:intergenic |
| GCAGGTTTGTCGGCAGCTAT+TGG | 0.362443 | 4.1:+62954274 | MS.gene72534:CDS |
| GAAGAAGAATTTAATGAAGC+TGG | 0.362869 | 4.1:+62954481 | MS.gene72534:CDS |
| GACGACTTCGAAATGCAAAC+TGG | 0.369537 | 4.1:+62955495 | MS.gene72534:CDS |
| GAAAGAATGTGTTTCGGAAC+AGG | 0.376759 | 4.1:+62954432 | MS.gene72534:CDS |
| GGGTAGTTTCTTCATCCTCT+TGG | 0.377859 | 4.1:-62955868 | None:intergenic |
| TTCACTATTTGCTGAAATGT+TGG | 0.384639 | 4.1:+62953602 | MS.gene72534:CDS |
| CAAACCTTAACCATATGTTT+AGG | 0.391917 | 4.1:+62956207 | MS.gene72534:CDS |
| GTGATTCTGTTAAGGGTGCT+GGG | 0.393629 | 4.1:+62953553 | MS.gene72534:CDS |
| CATATTCTATAAGTTTCATC+GGG | 0.394392 | 4.1:-62955038 | None:intergenic |
| AAGCACAGTCTATAGCATTC+TGG | 0.394919 | 4.1:-62954852 | None:intergenic |
| TTCTGTTGGTGCAGGTTTGT+CGG | 0.398560 | 4.1:+62954264 | MS.gene72534:CDS |
| TATCTTACCTTTAACCTTTG+CGG | 0.399233 | 4.1:-62953994 | None:intergenic |
| CACATTCCACAGACCCATCT+AGG | 0.400964 | 4.1:-62953500 | None:intergenic |
| ATTGATGTCACTCCTTCTCT+TGG | 0.404257 | 4.1:-62955463 | None:intergenic |
| ATCGTGTCATAGATGTCTTT+AGG | 0.408022 | 4.1:-62954925 | None:intergenic |
| CTGTAATTGTGGCTGCTGAT+TGG | 0.409494 | 4.1:+62955814 | MS.gene72534:CDS |
| TAGATGGGTCTGTGGAATGT+GGG | 0.413456 | 4.1:+62953502 | MS.gene72534:CDS |
| ATCCATGGCAGAAGCAGAAA+AGG | 0.416193 | 4.1:+62953419 | None:intergenic |
| ATTTGTGGTGATTCTGTTAA+GGG | 0.416401 | 4.1:+62953546 | MS.gene72534:CDS |
| GATTTGTGGTGATTCTGTTA+AGG | 0.418399 | 4.1:+62953545 | MS.gene72534:CDS |
| AAACTACCCATGGCTGGAAC+TGG | 0.419246 | 4.1:+62955882 | MS.gene72534:CDS |
| TCAGCAAATAGTGAAGTAAC+CGG | 0.419526 | 4.1:-62953594 | None:intergenic |
| TACTGGTGGCTTTGATCGAT+TGG | 0.421819 | 4.1:+62955083 | MS.gene72534:CDS |
| TCAGGTGAAACCAGGTGATC+TGG | 0.428952 | 4.1:-62955435 | None:intergenic |
| GTTAATCGTAGGCCATATTC+CGG | 0.429226 | 4.1:+62956062 | MS.gene72534:CDS |
| GAATCTGGAGTCCCATTCAT+TGG | 0.430347 | 4.1:-62955390 | None:intergenic |
| AACGCCTAAACATATGGTTA+AGG | 0.435287 | 4.1:-62956211 | None:intergenic |
| GGGAAAAGAAAACTAACATA+TGG | 0.436804 | 4.1:+62954502 | MS.gene72534:CDS |
| GTCCAAAACGCCTAAACATA+TGG | 0.451508 | 4.1:-62956217 | None:intergenic |
| CGATTAACTTGGGCTGGCTC+TGG | 0.452688 | 4.1:-62956047 | None:intergenic |
| AAAGCGTAAATGTAATTTCA+AGG | 0.454246 | 4.1:+62955326 | MS.gene72534:CDS |
| TGTTAAGGGTGCTGGGGCCG+TGG | 0.456262 | 4.1:+62953560 | MS.gene72534:CDS |
| TAGTTCAGAAATAGTTCATC+AGG | 0.456384 | 4.1:+62954558 | MS.gene72534:CDS |
| TACTATGCATCCAGCAAAGA+AGG | 0.457588 | 4.1:+62955350 | MS.gene72534:CDS |
| TCAACATAATCAACAGTTGT+AGG | 0.458971 | 4.1:-62955666 | None:intergenic |
| GCTTGTAGTTCTGTTGGTGC+AGG | 0.459611 | 4.1:+62954256 | MS.gene72534:CDS |
| AAGAAGAATTTAATGAAGCT+GGG | 0.461918 | 4.1:+62954482 | MS.gene72534:CDS |
| GAAACATCCAATCCATTCTC+AGG | 0.469929 | 4.1:-62955642 | None:intergenic |
| AAGTCGACAGAGCAAGCAAA+CGG | 0.474065 | 4.1:+62956261 | MS.gene72534:CDS |
| TCAACGTCTCCATCTGTCTT+CGG | 0.475054 | 4.1:-62955612 | None:intergenic |
| TCGGAACAGGTTGGTTCAGA+TGG | 0.478265 | 4.1:+62954445 | MS.gene72534:CDS |
| ACATATTCTATAAGTTTCAT+CGG | 0.479992 | 4.1:-62955039 | None:intergenic |
| ATGGTTAAGGTTTGTTTCTG+AGG | 0.480633 | 4.1:-62956198 | None:intergenic |
| ATGGGGAATGATAAAGTTGA+TGG | 0.482691 | 4.1:+62953777 | MS.gene72534:CDS |
| ATTCTCGAGACGGTGATTGT+TGG | 0.483757 | 4.1:+62955409 | MS.gene72534:CDS |
| CATTCTGGAATGATTCTAAA+CGG | 0.484135 | 4.1:-62954837 | None:intergenic |
| TCTCAAGACGAGTCGAATAT+GGG | 0.485338 | 4.1:+62954884 | MS.gene72534:CDS |
| ATTCTTGAAATCAGAGAAGA+AGG | 0.488652 | 4.1:-62955790 | None:intergenic |
| ATTGTTGATGAACTTGTTTG+TGG | 0.491554 | 4.1:+62953810 | MS.gene72534:CDS |
| GGCCTACGATTAACTTGGGC+TGG | 0.494128 | 4.1:-62956053 | None:intergenic |
| GGCCGTGGCCGTAGCTCACC+CGG | 0.494574 | 4.1:+62953575 | MS.gene72534:CDS |
| TGATAACATTGATGATATTG+AGG | 0.495792 | 4.1:+62953665 | MS.gene72534:CDS |
| GAATGCTATAGACTGTGCTT+TGG | 0.497440 | 4.1:+62954855 | MS.gene72534:CDS |
| AGAACCTACCCATGGTGGCC+TGG | 0.498118 | 4.1:+62954652 | MS.gene72534:CDS |
| AGATGGGTCTGTGGAATGTG+GGG | 0.499368 | 4.1:+62953503 | MS.gene72534:CDS |
| GAACAATCTGATGTCCTTGA+GGG | 0.501425 | 4.1:+62953912 | MS.gene72534:CDS |
| AGTGAAGATAGCATATCATC+TGG | 0.502758 | 4.1:-62955711 | None:intergenic |
| TTGTTGACAATGAACAAGAT+TGG | 0.505222 | 4.1:+62955214 | MS.gene72534:CDS |
| TTGTTGGACTCCAGATCACC+TGG | 0.505467 | 4.1:+62955425 | MS.gene72534:CDS |
| AGGACGTCAGACCCAATGAA+TGG | 0.506637 | 4.1:+62955378 | MS.gene72534:CDS |
| AAAGCTTTGAACACTGCACT+TGG | 0.506705 | 4.1:-62956392 | None:intergenic |
| GTTCATGATGAAGTGATTTG+TGG | 0.507611 | 4.1:+62953531 | MS.gene72534:CDS |
| CATTGTCATTGTCAATGACC+CGG | 0.508721 | 4.1:-62955953 | None:intergenic |
| TGTAGAGAAAGAATGTGTTT+CGG | 0.512683 | 4.1:+62954426 | MS.gene72534:CDS |
| TCCCAGTGTTGTCTACAGTC+TGG | 0.514788 | 4.1:-62954954 | None:intergenic |
| AGTCGACAGAGCAAGCAAAC+GGG | 0.514954 | 4.1:+62956262 | MS.gene72534:CDS |
| GAATGAAGCATCTCAGCTAA+AGG | 0.515864 | 4.1:+62954774 | MS.gene72534:CDS |
| GATGTTGGTGAAACCCTAGA+TGG | 0.516405 | 4.1:+62953486 | MS.gene72534:CDS |
| TGATCGTCTGTATTAACTGC+AGG | 0.518820 | 4.1:-62955261 | None:intergenic |
| TCTTTCTCTGATATGGTTTG+GGG | 0.522638 | 4.1:+62954622 | MS.gene72534:CDS |
| ACACTATCTAAGTTGCCTAC+TGG | 0.524971 | 4.1:+62955066 | MS.gene72534:CDS |
| AAGTTCATAACAAGCTCAGC+AGG | 0.528013 | 4.1:-62956155 | None:intergenic |
| GGACGTCAGACCCAATGAAT+GGG | 0.528030 | 4.1:+62955379 | MS.gene72534:CDS |
| GGTTGGTTCAGATGGTGGTC+GGG | 0.528631 | 4.1:+62954453 | MS.gene72534:CDS |
| AATCTGGAGTCCCATTCATT+GGG | 0.529750 | 4.1:-62955389 | None:intergenic |
| TGGTTAAGGTTTGTTTCTGA+GGG | 0.530544 | 4.1:-62956197 | None:intergenic |
| GTCTAATATTGTTGATATCG+TGG | 0.534021 | 4.1:+62953725 | MS.gene72534:CDS |
| AAATTGGTGACTATATTCGT+AGG | 0.534916 | 4.1:+62955571 | MS.gene72534:CDS |
| CACTTGGAGTGTAATTAAGC+TGG | 0.535263 | 4.1:-62956376 | None:intergenic |
| GTGACTCAAATTGGACTGAC+CGG | 0.535526 | 4.1:+62955934 | MS.gene72534:CDS |
| GAGGGATCAAATATCTGTCC+AGG | 0.536371 | 4.1:-62954670 | None:intergenic |
| CTAGATGGGTCTGTGGAATG+TGG | 0.536941 | 4.1:+62953501 | MS.gene72534:CDS |
| TTTCAAGAATTCTGTAATTG+TGG | 0.537467 | 4.1:+62955803 | MS.gene72534:CDS |
| TTGATATTGAACATGCCGAT+GGG | 0.541321 | 4.1:+62953759 | MS.gene72534:CDS |
| TTGGTGACAAATCATTTGCA+TGG | 0.541342 | 4.1:+62954752 | MS.gene72534:CDS |
| AGCAAGCAAACGGGCAAGAG+TGG | 0.541526 | 4.1:+62956271 | MS.gene72534:CDS |
| CAGAAAAGTATATTCTCCAA+GGG | 0.541983 | 4.1:-62955754 | None:intergenic |
| TCAGAAAAGTATATTCTCCA+AGG | 0.544625 | 4.1:-62955755 | None:intergenic |
| CTAGGGTTTCACCAACATCA+TGG | 0.546967 | 4.1:-62953482 | None:intergenic |
| TGCCCACTCAGATGCATCTG+AGG | 0.546971 | 4.1:-62954689 | None:intergenic |
| TTCCATCATGCAACAGCACA+TGG | 0.548238 | 4.1:-62954363 | None:intergenic |
| AATATGGCCTACGATTAACT+TGG | 0.550585 | 4.1:-62956058 | None:intergenic |
| AGTGATGCTTGTAGTTCTGT+TGG | 0.553428 | 4.1:+62954250 | MS.gene72534:CDS |
| CACCTGAACATTCCAAGAGA+AGG | 0.554732 | 4.1:+62955451 | MS.gene72534:CDS |
| ATGAAGAAACTACCCATGGC+TGG | 0.555254 | 4.1:+62955876 | MS.gene72534:CDS |
| GAACAGGTTGGTTCAGATGG+TGG | 0.560765 | 4.1:+62954448 | MS.gene72534:CDS |
| GGAGTCAAATATGAGGCAAA+AGG | 0.560804 | 4.1:+62954402 | MS.gene72534:CDS |
| TCCATGGCAGAAGCAGAAAA+GGG | 0.563521 | 4.1:+62953420 | None:intergenic |
| TGAACTATTTCTGAACTACC+AGG | 0.564289 | 4.1:-62954553 | None:intergenic |
| ATCAGATCCAGTTCCAGCCA+TGG | 0.566118 | 4.1:-62955889 | None:intergenic |
| TGGAATGTTCAGGTGAAACC+AGG | 0.567728 | 4.1:-62955443 | None:intergenic |
| TAAGAAGTGTGTAGATGCAG+AGG | 0.570718 | 4.1:+62956298 | MS.gene72534:CDS |
| TAGGGTTTCACCAACATCAT+GGG | 0.571441 | 4.1:-62953481 | None:intergenic |
| ATATCTGTCCAGGCCACCAT+GGG | 0.571967 | 4.1:-62954660 | None:intergenic |
| ACGACTTCGAAATGCAAACT+GGG | 0.572627 | 4.1:+62955496 | MS.gene72534:CDS |
| TGAAGTAACCGGGTGAGCTA+CGG | 0.573011 | 4.1:-62953583 | None:intergenic |
| AGGTTGGTTCAGATGGTGGT+CGG | 0.574310 | 4.1:+62954452 | MS.gene72534:CDS |
| ACACTCAAATTACTGAGCAA+TGG | 0.575379 | 4.1:+62954338 | MS.gene72534:CDS |
| ATTCTGTGCACGGATATAGT+TGG | 0.576192 | 4.1:+62955843 | MS.gene72534:CDS |
| ACATTCCACAGACCCATCTA+GGG | 0.577354 | 4.1:-62953499 | None:intergenic |
| GATGGGTCTGTGGAATGTGG+GGG | 0.577375 | 4.1:+62953504 | MS.gene72534:CDS |
| CAGAAATAGTTCATCAGGCA+CGG | 0.577908 | 4.1:+62954563 | MS.gene72534:CDS |
| GCCAGACTGTAGACAACACT+GGG | 0.580489 | 4.1:+62954953 | MS.gene72534:CDS |
| AATAAGCATCACACGTGGGG+TGG | 0.581145 | 4.1:+62954987 | MS.gene72534:CDS |
| ATTGGAGCTTGAGATTGCTA+AGG | 0.583274 | 4.1:+62955101 | MS.gene72534:CDS |
| AATTGGTGACTATATTCGTA+GGG | 0.586383 | 4.1:+62955572 | MS.gene72534:CDS |
| AACCGGGTGAGCTACGGCCA+CGG | 0.587923 | 4.1:-62953577 | None:intergenic |
| ACCATTGTGGCCCATGATGT+TGG | 0.590779 | 4.1:+62953471 | MS.gene72534:CDS |
| GTTAATACAGACGATCAAGC+TGG | 0.592793 | 4.1:+62955267 | MS.gene72534:CDS |
| TTTGATATTGAACATGCCGA+TGG | 0.594443 | 4.1:+62953758 | MS.gene72534:CDS |
| AAAGATGCACTTGTGAAGCC+TGG | 0.594983 | 4.1:+62954535 | MS.gene72534:CDS |
| GAATGTGTTTCGGAACAGGT+TGG | 0.597469 | 4.1:+62954436 | MS.gene72534:CDS |
| GAACTCATTCCGAAGACAGA+TGG | 0.599666 | 4.1:+62955603 | MS.gene72534:CDS |
| TCGGCGAGGAGTCAAATATG+AGG | 0.599713 | 4.1:+62954395 | MS.gene72534:CDS |
| GTCGGCAGCTATTGGTAGTG+AGG | 0.600055 | 4.1:+62954282 | MS.gene72534:CDS |
| TCAGATCCAGTTCCAGCCAT+GGG | 0.600255 | 4.1:-62955888 | None:intergenic |
| GCCCACTCAGATGCATCTGA+GGG | 0.601078 | 4.1:-62954688 | None:intergenic |
| TTCTGAAAGCAATCATGCTG+AGG | 0.603160 | 4.1:+62956094 | MS.gene72534:CDS |
| TAGGGCACATTTCTCCACAA+TGG | 0.604810 | 4.1:+62954801 | MS.gene72534:CDS |
| ACCAACATCATGGGCCACAA+TGG | 0.610071 | 4.1:-62953472 | None:intergenic |
| TGAACAATCTGATGTCCTTG+AGG | 0.612356 | 4.1:+62953911 | MS.gene72534:CDS |
| AGCCATGTGCTGTTGCATGA+TGG | 0.616493 | 4.1:+62954361 | MS.gene72534:CDS |
| GCATTCTCATCTATATAACC+AGG | 0.616725 | 4.1:-62956131 | None:intergenic |
| TCCCTCAGATGCATCTGAGT+GGG | 0.618148 | 4.1:+62954687 | MS.gene72534:CDS |
| CCAGAAATACAACTTTGTGA+AGG | 0.619620 | 4.1:+62955168 | MS.gene72534:CDS |
| AACAGAAAGAAGTAAAACAA+TGG | 0.622125 | 4.1:+62953965 | MS.gene72534:CDS |
| CGGATATAGTTGGCACCAAG+AGG | 0.622839 | 4.1:+62955853 | MS.gene72534:CDS |
| TGACTCAAATTGGACTGACC+GGG | 0.622964 | 4.1:+62955935 | MS.gene72534:CDS |
| CTGTCCAGGCCACCATGGGT+AGG | 0.623900 | 4.1:-62954656 | None:intergenic |
| CTATCTAAGTTGCCTACTGG+TGG | 0.624727 | 4.1:+62955069 | MS.gene72534:CDS |
| TTGGAAAGAGATTCTGTGCA+CGG | 0.625171 | 4.1:+62955833 | MS.gene72534:CDS |
| ACTTTGTGAAGGCGTTGACA+AGG | 0.626364 | 4.1:+62955179 | MS.gene72534:CDS |
| CAGCAAATAGTGAAGTAACC+GGG | 0.627759 | 4.1:-62953593 | None:intergenic |
| ATATGGCCTACGATTAACTT+GGG | 0.629330 | 4.1:-62956057 | None:intergenic |
| AGCCAGACTGTAGACAACAC+TGG | 0.630022 | 4.1:+62954952 | MS.gene72534:CDS |
| CATCTATTAGCATCCCCTCA+AGG | 0.633543 | 4.1:-62953926 | None:intergenic |
| AATCGATCAAAGCCACCAGT+AGG | 0.638533 | 4.1:-62955081 | None:intergenic |
| ATCCCTCAGATGCATCTGAG+TGG | 0.638881 | 4.1:+62954686 | MS.gene72534:CDS |
| GGGACTCCAGATTCTCGAGA+CGG | 0.640014 | 4.1:+62955399 | MS.gene72534:CDS |
| AGTTGAAAAGTGCAATGCAA+AGG | 0.640652 | 4.1:+62953839 | MS.gene72534:CDS |
| AACAATGGAACAGACCGCAA+AGG | 0.641264 | 4.1:+62953980 | MS.gene72534:CDS |
| AATATCTGTCCAGGCCACCA+TGG | 0.643849 | 4.1:-62954661 | None:intergenic |
| TCAACTTTATCATTCCCCAT+CGG | 0.645503 | 4.1:-62953774 | None:intergenic |
| AAGAAATAAGCATCACACGT+GGG | 0.646392 | 4.1:+62954983 | MS.gene72534:CDS |
| AGAAATAAGCATCACACGTG+GGG | 0.647299 | 4.1:+62954984 | MS.gene72534:CDS |
| TGATTCTGTTAAGGGTGCTG+GGG | 0.649891 | 4.1:+62953554 | MS.gene72534:CDS |
| AGAAAAGTATATTCTCCAAG+GGG | 0.651247 | 4.1:-62955753 | None:intergenic |
| TGATATTGAACATGCCGATG+GGG | 0.657087 | 4.1:+62953760 | MS.gene72534:CDS |
| TGCAACTTCAGAAACCATTG+TGG | 0.658853 | 4.1:+62953458 | MS.gene72534:CDS |
| AGCCAGCCCAAGTTAATCGT+AGG | 0.659455 | 4.1:+62956051 | MS.gene72534:CDS |
| GGTGGATGAATCTCAAAATG+TGG | 0.659940 | 4.1:+62955005 | MS.gene72534:CDS |
| GCTTGTTATGAACTTTGCCG+AGG | 0.662578 | 4.1:+62956163 | MS.gene72534:CDS |
| AACAATCTGATGTCCTTGAG+GGG | 0.663054 | 4.1:+62953913 | MS.gene72534:CDS |
| TGAGGGAACAGAATTGACCT+CGG | 0.667524 | 4.1:-62956180 | None:intergenic |
| TCTCCACAATGGAAAAGCAG+AGG | 0.668805 | 4.1:+62954812 | MS.gene72534:CDS |
| CAAGAAATAAGCATCACACG+TGG | 0.672704 | 4.1:+62954982 | MS.gene72534:CDS |
| GCAAAGTGAGAACCTACCCA+TGG | 0.672895 | 4.1:+62954644 | MS.gene72534:CDS |
| TTCTCATCTATATAACCAGG+AGG | 0.679754 | 4.1:-62956128 | None:intergenic |
| ATGTTGGTGAAACCCTAGAT+GGG | 0.684018 | 4.1:+62953487 | MS.gene72534:CDS |
| GAGGATGAAGAAACTACCCA+TGG | 0.684673 | 4.1:+62955872 | MS.gene72534:CDS |
| AAGTGAGAACCTACCCATGG+TGG | 0.686895 | 4.1:+62954647 | MS.gene72534:CDS |
| CAATGAACAAGATTGGTGCG+AGG | 0.693330 | 4.1:+62955221 | MS.gene72534:CDS |
| TGAAACCCTAGATGGGTCTG+TGG | 0.694469 | 4.1:+62953494 | MS.gene72534:CDS |
| ATAGCTGACAACGATGTGAG+TGG | 0.732139 | 4.1:+62953870 | MS.gene72534:CDS |
| ATATTCTATAAGTTTCATCG+GGG | 0.738354 | 4.1:-62955037 | None:intergenic |
| ATAGATGTTGAAGATCAACA+AGG | 0.760784 | 4.1:+62953942 | MS.gene72534:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CTTTGATTTTTTAAATTTCT+CGG | - | chr4.1:62955294-62955313 | None:intergenic | 15.0% |
| !!! | TTTTGTCATCAAAATTTTAT+CGG | + | chr4.1:62954177-62954196 | MS.gene72534:intron | 15.0% |
| !! | ACATATTCTATAAGTTTCAT+CGG | - | chr4.1:62955042-62955061 | None:intergenic | 20.0% |
| ! | AAAGCGTAAATGTAATTTCA+AGG | + | chr4.1:62955326-62955345 | MS.gene72534:CDS | 25.0% |
| ! | AACAAGTTCATCAACAATAT+TGG | - | chr4.1:62953808-62953827 | None:intergenic | 25.0% |
| ! | AACAGAAAGAAGTAAAACAA+TGG | + | chr4.1:62953965-62953984 | MS.gene72534:CDS | 25.0% |
| ! | AAGAAGAATTTAATGAAGCT+GGG | + | chr4.1:62954482-62954501 | MS.gene72534:CDS | 25.0% |
| ! | ATATTCTATAAGTTTCATCG+GGG | - | chr4.1:62955040-62955059 | None:intergenic | 25.0% |
| ! | CATATTCTATAAGTTTCATC+GGG | - | chr4.1:62955041-62955060 | None:intergenic | 25.0% |
| ! | GCTAAAAAGTTCAACATATT+TGG | + | chr4.1:62956335-62956354 | MS.gene72534:CDS | 25.0% |
| ! | TTTCAAGAATTCTGTAATTG+TGG | + | chr4.1:62955803-62955822 | MS.gene72534:CDS | 25.0% |
| !! | AATTACATTTACGCTTTTGA+TGG | - | chr4.1:62955323-62955342 | None:intergenic | 25.0% |
| !! | ACAAATCCATCGTTTAAAAT+TGG | + | chr4.1:62955555-62955574 | MS.gene72534:CDS | 25.0% |
| !! | ATTACATTTACGCTTTTGAT+GGG | - | chr4.1:62955322-62955341 | None:intergenic | 25.0% |
| !! | TGATAACATTGATGATATTG+AGG | + | chr4.1:62953665-62953684 | MS.gene72534:CDS | 25.0% |
| !!! | AATTTTAAACGATGGATTTG+TGG | - | chr4.1:62955556-62955575 | None:intergenic | 25.0% |
| AAGATATGAGTGACTCAAAT+TGG | + | chr4.1:62955925-62955944 | MS.gene72534:CDS | 30.0% | |
| ACTGGGAAAAATACAATTTC+TGG | + | chr4.1:62955513-62955532 | MS.gene72534:CDS | 30.0% | |
| ATAGATGTTGAAGATCAACA+AGG | + | chr4.1:62953942-62953961 | MS.gene72534:CDS | 30.0% | |
| ATTCTTGAAATCAGAGAAGA+AGG | - | chr4.1:62955793-62955812 | None:intergenic | 30.0% | |
| ATTTGTGGTGATTCTGTTAA+GGG | + | chr4.1:62953546-62953565 | MS.gene72534:CDS | 30.0% | |
| CAAACCTTAACCATATGTTT+AGG | + | chr4.1:62956207-62956226 | MS.gene72534:CDS | 30.0% | |
| CAGAAAAAAGACAAACTACT+TGG | + | chr4.1:62956011-62956030 | MS.gene72534:CDS | 30.0% | |
| GAAGAAGAATTTAATGAAGC+TGG | + | chr4.1:62954481-62954500 | MS.gene72534:CDS | 30.0% | |
| GGGAAAAGAAAACTAACATA+TGG | + | chr4.1:62954502-62954521 | MS.gene72534:CDS | 30.0% | |
| GTCTAATATTGTTGATATCG+TGG | + | chr4.1:62953725-62953744 | MS.gene72534:CDS | 30.0% | |
| TAGTTCAGAAATAGTTCATC+AGG | + | chr4.1:62954558-62954577 | MS.gene72534:CDS | 30.0% | |
| TATCTTACCTTTAACCTTTG+CGG | - | chr4.1:62953997-62954016 | None:intergenic | 30.0% | |
| TCAACATAATCAACAGTTGT+AGG | - | chr4.1:62955669-62955688 | None:intergenic | 30.0% | |
| TGTAGAGAAAGAATGTGTTT+CGG | + | chr4.1:62954426-62954445 | MS.gene72534:CDS | 30.0% | |
| TTCAATGTAATCACAAGTGT+CGG | - | chr4.1:62954157-62954176 | None:intergenic | 30.0% | |
| TTCTTTCTCTGATATGGTTT+GGG | + | chr4.1:62954621-62954640 | MS.gene72534:CDS | 30.0% | |
| TTGTTGACAATGAACAAGAT+TGG | + | chr4.1:62955214-62955233 | MS.gene72534:CDS | 30.0% | |
| TTTCTTTCTCTGATATGGTT+TGG | + | chr4.1:62954620-62954639 | MS.gene72534:CDS | 30.0% | |
| ! | AAATTGGTGACTATATTCGT+AGG | + | chr4.1:62955571-62955590 | MS.gene72534:CDS | 30.0% |
| ! | AATTGGTGACTATATTCGTA+GGG | + | chr4.1:62955572-62955591 | MS.gene72534:CDS | 30.0% |
| ! | AGAAAAGTATATTCTCCAAG+GGG | - | chr4.1:62955756-62955775 | None:intergenic | 30.0% |
| ! | ATCTCAGCTAAAGGATTTTA+GGG | + | chr4.1:62954783-62954802 | MS.gene72534:CDS | 30.0% |
| ! | ATTGTTGATGAACTTGTTTG+TGG | + | chr4.1:62953810-62953829 | MS.gene72534:CDS | 30.0% |
| ! | CAGAAAAGTATATTCTCCAA+GGG | - | chr4.1:62955757-62955776 | None:intergenic | 30.0% |
| ! | CATGATGGAAAAGAAAAACT+CGG | + | chr4.1:62954376-62954395 | MS.gene72534:CDS | 30.0% |
| ! | GAAATGTCAAATTTTGTGGA+TGG | + | chr4.1:62953687-62953706 | MS.gene72534:CDS | 30.0% |
| ! | GGAGAATATACTTTTCTGAA+TGG | + | chr4.1:62955759-62955778 | MS.gene72534:CDS | 30.0% |
| ! | TAGTCACCAATTTTAAACGA+TGG | - | chr4.1:62955564-62955583 | None:intergenic | 30.0% |
| ! | TCAGAAAAGTATATTCTCCA+AGG | - | chr4.1:62955758-62955777 | None:intergenic | 30.0% |
| ! | TGAGGAAATGTCAAATTTTG+TGG | + | chr4.1:62953683-62953702 | MS.gene72534:CDS | 30.0% |
| ! | TTCACTATTTGCTGAAATGT+TGG | + | chr4.1:62953602-62953621 | MS.gene72534:CDS | 30.0% |
| !! | CATTCTGGAATGATTCTAAA+CGG | - | chr4.1:62954840-62954859 | None:intergenic | 30.0% |
| !!! | CAAGTAGTTTGTCTTTTTTC+TGG | - | chr4.1:62956013-62956032 | None:intergenic | 30.0% |
| !!! | GATTGCTTTCAGAACTTTTT+TGG | - | chr4.1:62956088-62956107 | None:intergenic | 30.0% |
| !!! | TTTTTCTGGTTTTTCTGCAA+TGG | - | chr4.1:62955999-62956018 | None:intergenic | 30.0% |
| AACGCCTAAACATATGGTTA+AGG | - | chr4.1:62956214-62956233 | None:intergenic | 35.0% | |
| AAGAAATAAGCATCACACGT+GGG | + | chr4.1:62954983-62955002 | MS.gene72534:CDS | 35.0% | |
| AATATGGCCTACGATTAACT+TGG | - | chr4.1:62956061-62956080 | None:intergenic | 35.0% | |
| ACACTCAAATTACTGAGCAA+TGG | + | chr4.1:62954338-62954357 | MS.gene72534:CDS | 35.0% | |
| AGTGAAGATAGCATATCATC+TGG | - | chr4.1:62955714-62955733 | None:intergenic | 35.0% | |
| ATATGGCCTACGATTAACTT+GGG | - | chr4.1:62956060-62956079 | None:intergenic | 35.0% | |
| ATCCAGCAAAGAAGGAAAAA+AGG | + | chr4.1:62955358-62955377 | MS.gene72534:CDS | 35.0% | |
| ATCGTGTCATAGATGTCTTT+AGG | - | chr4.1:62954928-62954947 | None:intergenic | 35.0% | |
| ATGGGGAATGATAAAGTTGA+TGG | + | chr4.1:62953777-62953796 | MS.gene72534:CDS | 35.0% | |
| CCAGAAATACAACTTTGTGA+AGG | + | chr4.1:62955168-62955187 | MS.gene72534:CDS | 35.0% | |
| CCTTCACAAAGTTGTATTTC+TGG | - | chr4.1:62955171-62955190 | None:intergenic | 35.0% | |
| GATTTGTGGTGATTCTGTTA+AGG | + | chr4.1:62953545-62953564 | MS.gene72534:CDS | 35.0% | |
| GCATTCTCATCTATATAACC+AGG | - | chr4.1:62956134-62956153 | None:intergenic | 35.0% | |
| GTTCATGATGAAGTGATTTG+TGG | + | chr4.1:62953531-62953550 | MS.gene72534:CDS | 35.0% | |
| TCAACTTTATCATTCCCCAT+CGG | - | chr4.1:62953777-62953796 | None:intergenic | 35.0% | |
| TCAGCAAATAGTGAAGTAAC+CGG | - | chr4.1:62953597-62953616 | None:intergenic | 35.0% | |
| TCTTTCTCTGATATGGTTTG+GGG | + | chr4.1:62954622-62954641 | MS.gene72534:CDS | 35.0% | |
| TTCTCATCTATATAACCAGG+AGG | - | chr4.1:62956131-62956150 | None:intergenic | 35.0% | |
| TTGATATTGAACATGCCGAT+GGG | + | chr4.1:62953759-62953778 | MS.gene72534:CDS | 35.0% | |
| TTTGATATTGAACATGCCGA+TGG | + | chr4.1:62953758-62953777 | MS.gene72534:CDS | 35.0% | |
| TTTGTTTCCTGCTTAACTAG+TGG | + | chr4.1:62954037-62954056 | MS.gene72534:intron | 35.0% | |
| ! | AACCATATGTTTAGGCGTTT+TGG | + | chr4.1:62956215-62956234 | MS.gene72534:CDS | 35.0% |
| ! | AGTTGAAAAGTGCAATGCAA+AGG | + | chr4.1:62953839-62953858 | MS.gene72534:CDS | 35.0% |
| ! | ATATAACCAGGAGGTTTTTC+AGG | - | chr4.1:62956122-62956141 | None:intergenic | 35.0% |
| ! | CATCTCAGCTAAAGGATTTT+AGG | + | chr4.1:62954782-62954801 | MS.gene72534:CDS | 35.0% |
| ! | CGAGTTTTCTTTCTCTGATA+TGG | + | chr4.1:62954615-62954634 | MS.gene72534:CDS | 35.0% |
| ! | GTTGATGTTTTTCCTGAGAA+TGG | + | chr4.1:62955630-62955649 | MS.gene72534:CDS | 35.0% |
| ! | TGTTTTTCCTGAGAATGGAT+TGG | + | chr4.1:62955635-62955654 | MS.gene72534:CDS | 35.0% |
| ! | TTGGTGACAAATCATTTGCA+TGG | + | chr4.1:62954752-62954771 | MS.gene72534:CDS | 35.0% |
| !! | AATTTTATCGGTGTCTTGTC+AGG | + | chr4.1:62954189-62954208 | MS.gene72534:intron | 35.0% |
| !! | ATGGTTAAGGTTTGTTTCTG+AGG | - | chr4.1:62956201-62956220 | None:intergenic | 35.0% |
| !! | TGAACTATTTCTGAACTACC+AGG | - | chr4.1:62954556-62954575 | None:intergenic | 35.0% |
| !! | TGGTTAAGGTTTGTTTCTGA+GGG | - | chr4.1:62956200-62956219 | None:intergenic | 35.0% |
| !!! | TGCTATTTCGTTGCGTATTT+TGG | + | chr4.1:62954733-62954752 | MS.gene72534:CDS | 35.0% |
| AACAATCTGATGTCCTTGAG+GGG | + | chr4.1:62953913-62953932 | MS.gene72534:CDS | 40.0% | |
| AAGCACAGTCTATAGCATTC+TGG | - | chr4.1:62954855-62954874 | None:intergenic | 40.0% | |
| AAGTTCATAACAAGCTCAGC+AGG | - | chr4.1:62956158-62956177 | None:intergenic | 40.0% | |
| ACACTATCTAAGTTGCCTAC+TGG | + | chr4.1:62955066-62955085 | MS.gene72534:CDS | 40.0% | |
| ACGACTTCGAAATGCAAACT+GGG | + | chr4.1:62955496-62955515 | MS.gene72534:CDS | 40.0% | |
| AGAAATAAGCATCACACGTG+GGG | + | chr4.1:62954984-62955003 | MS.gene72534:CDS | 40.0% | |
| ATCTAGAAACCTGTGAAGCA+TGG | - | chr4.1:62954230-62954249 | None:intergenic | 40.0% | |
| ATGTTATCATTCCCCCCAAT+CGG | - | chr4.1:62953654-62953673 | None:intergenic | 40.0% | |
| ATTCTGTGCACGGATATAGT+TGG | + | chr4.1:62955843-62955862 | MS.gene72534:CDS | 40.0% | |
| ATTGATGTCACTCCTTCTCT+TGG | - | chr4.1:62955466-62955485 | None:intergenic | 40.0% | |
| ATTGGAGCTTGAGATTGCTA+AGG | + | chr4.1:62955101-62955120 | MS.gene72534:CDS | 40.0% | |
| CAAGAAATAAGCATCACACG+TGG | + | chr4.1:62954982-62955001 | MS.gene72534:CDS | 40.0% | |
| CACTTGGAGTGTAATTAAGC+TGG | - | chr4.1:62956379-62956398 | None:intergenic | 40.0% | |
| CAGAAATAGTTCATCAGGCA+CGG | + | chr4.1:62954563-62954582 | MS.gene72534:CDS | 40.0% | |
| CAGCAAATAGTGAAGTAACC+GGG | - | chr4.1:62953596-62953615 | None:intergenic | 40.0% | |
| CATTGTCATTGTCAATGACC+CGG | - | chr4.1:62955956-62955975 | None:intergenic | 40.0% | |
| CTGCCAGCAGTAAAAAAAGA+AGG | + | chr4.1:62954592-62954611 | MS.gene72534:CDS | 40.0% | |
| GAAACATCCAATCCATTCTC+AGG | - | chr4.1:62955645-62955664 | None:intergenic | 40.0% | |
| GAAAGAATGTGTTTCGGAAC+AGG | + | chr4.1:62954432-62954451 | MS.gene72534:CDS | 40.0% | |
| GAACAATCTGATGTCCTTGA+GGG | + | chr4.1:62953912-62953931 | MS.gene72534:CDS | 40.0% | |
| GAATGCTATAGACTGTGCTT+TGG | + | chr4.1:62954855-62954874 | MS.gene72534:CDS | 40.0% | |
| GGAGTCAAATATGAGGCAAA+AGG | + | chr4.1:62954402-62954421 | MS.gene72534:CDS | 40.0% | |
| GGTGGATGAATCTCAAAATG+TGG | + | chr4.1:62955005-62955024 | MS.gene72534:CDS | 40.0% | |
| GTCCAAAACGCCTAAACATA+TGG | - | chr4.1:62956220-62956239 | None:intergenic | 40.0% | |
| GTTAATACAGACGATCAAGC+TGG | + | chr4.1:62955267-62955286 | MS.gene72534:CDS | 40.0% | |
| GTTAATCGTAGGCCATATTC+CGG | + | chr4.1:62956062-62956081 | MS.gene72534:CDS | 40.0% | |
| GTTTCAACCACTAGTTAAGC+AGG | - | chr4.1:62954047-62954066 | None:intergenic | 40.0% | |
| TACTATGCATCCAGCAAAGA+AGG | + | chr4.1:62955350-62955369 | MS.gene72534:CDS | 40.0% | |
| TAGGGTTTCACCAACATCAT+GGG | - | chr4.1:62953484-62953503 | None:intergenic | 40.0% | |
| TCTCAAGACGAGTCGAATAT+GGG | + | chr4.1:62954884-62954903 | MS.gene72534:CDS | 40.0% | |
| TGAACAATCTGATGTCCTTG+AGG | + | chr4.1:62953911-62953930 | MS.gene72534:CDS | 40.0% | |
| TGATATTGAACATGCCGATG+GGG | + | chr4.1:62953760-62953779 | MS.gene72534:CDS | 40.0% | |
| TGATCGTCTGTATTAACTGC+AGG | - | chr4.1:62955264-62955283 | None:intergenic | 40.0% | |
| TGCAACTTCAGAAACCATTG+TGG | + | chr4.1:62953458-62953477 | MS.gene72534:CDS | 40.0% | |
| TTGGAAAGAGATTCTGTGCA+CGG | + | chr4.1:62955833-62955852 | MS.gene72534:CDS | 40.0% | |
| ! | AATCTGGAGTCCCATTCATT+GGG | - | chr4.1:62955392-62955411 | None:intergenic | 40.0% |
| ! | ACGTCTTCGATCAGAAGTAT+TGG | - | chr4.1:62954118-62954137 | None:intergenic | 40.0% |
| ! | AGTGATGCTTGTAGTTCTGT+TGG | + | chr4.1:62954250-62954269 | MS.gene72534:CDS | 40.0% |
| ! | ATGTTGGTGAAACCCTAGAT+GGG | + | chr4.1:62953487-62953506 | MS.gene72534:CDS | 40.0% |
| ! | GAATGAAGCATCTCAGCTAA+AGG | + | chr4.1:62954774-62954793 | MS.gene72534:CDS | 40.0% |
| ! | GGTTTTTCTGCAATGGATGT+TGG | - | chr4.1:62955992-62956011 | None:intergenic | 40.0% |
| ! | TAAGAAGTGTGTAGATGCAG+AGG | + | chr4.1:62956298-62956317 | MS.gene72534:CDS | 40.0% |
| ! | TCGATTTTGTACATGCCGAT+TGG | + | chr4.1:62953636-62953655 | MS.gene72534:CDS | 40.0% |
| ! | TTCTGAAAGCAATCATGCTG+AGG | + | chr4.1:62956094-62956113 | MS.gene72534:CDS | 40.0% |
| !! | AAAGCTTTGAACACTGCACT+TGG | - | chr4.1:62956395-62956414 | None:intergenic | 40.0% |
| !! | ATTTTGTACATGCCGATTGG+GGG | + | chr4.1:62953639-62953658 | MS.gene72534:CDS | 40.0% |
| !! | CGATTTTGTACATGCCGATT+GGG | + | chr4.1:62953637-62953656 | MS.gene72534:CDS | 40.0% |
| !! | GATTTTGTACATGCCGATTG+GGG | + | chr4.1:62953638-62953657 | MS.gene72534:CDS | 40.0% |
| !!! | GAACTTTTTTGGCCGGAATA+TGG | - | chr4.1:62956077-62956096 | None:intergenic | 40.0% |
| !!! | GCTTTCAGAACTTTTTTGGC+CGG | - | chr4.1:62956084-62956103 | None:intergenic | 40.0% |
| !!! | GTCCTTTTTTCCTTCTTTGC+TGG | - | chr4.1:62955363-62955382 | None:intergenic | 40.0% |
| !!! | TCGCCTTCTTTTTTTACTGC+TGG | - | chr4.1:62954598-62954617 | None:intergenic | 40.0% |
| AAACCTGTGAAGCATGGACA+CGG | - | chr4.1:62954224-62954243 | None:intergenic | 45.0% | |
| AAAGATGCACTTGTGAAGCC+TGG | + | chr4.1:62954535-62954554 | MS.gene72534:CDS | 45.0% | |
| AACAATGGAACAGACCGCAA+AGG | + | chr4.1:62953980-62953999 | MS.gene72534:CDS | 45.0% | |
| AAGTCGACAGAGCAAGCAAA+CGG | + | chr4.1:62956261-62956280 | MS.gene72534:CDS | 45.0% | |
| AATCGATCAAAGCCACCAGT+AGG | - | chr4.1:62955084-62955103 | None:intergenic | 45.0% | |
| ACATTCCACAGACCCATCTA+GGG | - | chr4.1:62953502-62953521 | None:intergenic | 45.0% | |
| ATAGCTGACAACGATGTGAG+TGG | + | chr4.1:62953870-62953889 | MS.gene72534:CDS | 45.0% | |
| ATGAAGAAACTACCCATGGC+TGG | + | chr4.1:62955876-62955895 | MS.gene72534:CDS | 45.0% | |
| ATTCTCGAGACGGTGATTGT+TGG | + | chr4.1:62955409-62955428 | MS.gene72534:CDS | 45.0% | |
| CAATGAACAAGATTGGTGCG+AGG | + | chr4.1:62955221-62955240 | MS.gene72534:CDS | 45.0% | |
| CACCTGAACATTCCAAGAGA+AGG | + | chr4.1:62955451-62955470 | MS.gene72534:CDS | 45.0% | |
| CATCTATTAGCATCCCCTCA+AGG | - | chr4.1:62953929-62953948 | None:intergenic | 45.0% | |
| CTAGGGTTTCACCAACATCA+TGG | - | chr4.1:62953485-62953504 | None:intergenic | 45.0% | |
| CTATCTAAGTTGCCTACTGG+TGG | + | chr4.1:62955069-62955088 | MS.gene72534:CDS | 45.0% | |
| CTCCTTCTCTTGGAATGTTC+AGG | - | chr4.1:62955456-62955475 | None:intergenic | 45.0% | |
| CTGTAATTGTGGCTGCTGAT+TGG | + | chr4.1:62955814-62955833 | MS.gene72534:CDS | 45.0% | |
| GAACAGACCGCAAAGGTTAA+AGG | + | chr4.1:62953987-62954006 | MS.gene72534:CDS | 45.0% | |
| GAACTCATTCCGAAGACAGA+TGG | + | chr4.1:62955603-62955622 | MS.gene72534:CDS | 45.0% | |
| GAATGTGTTTCGGAACAGGT+TGG | + | chr4.1:62954436-62954455 | MS.gene72534:CDS | 45.0% | |
| GACGACTTCGAAATGCAAAC+TGG | + | chr4.1:62955495-62955514 | MS.gene72534:CDS | 45.0% | |
| GAGGATGAAGAAACTACCCA+TGG | + | chr4.1:62955872-62955891 | MS.gene72534:CDS | 45.0% | |
| GAGGGATCAAATATCTGTCC+AGG | - | chr4.1:62954673-62954692 | None:intergenic | 45.0% | |
| GGGTAGTTTCTTCATCCTCT+TGG | - | chr4.1:62955871-62955890 | None:intergenic | 45.0% | |
| GTCTCAAGACGAGTCGAATA+TGG | + | chr4.1:62954883-62954902 | MS.gene72534:CDS | 45.0% | |
| GTGACTCAAATTGGACTGAC+CGG | + | chr4.1:62955934-62955953 | MS.gene72534:CDS | 45.0% | |
| TAGATGGGTCTGTGGAATGT+GGG | + | chr4.1:62953502-62953521 | MS.gene72534:CDS | 45.0% | |
| TAGGGCACATTTCTCCACAA+TGG | + | chr4.1:62954801-62954820 | MS.gene72534:CDS | 45.0% | |
| TCAACGTCTCCATCTGTCTT+CGG | - | chr4.1:62955615-62955634 | None:intergenic | 45.0% | |
| TCTCCACAATGGAAAAGCAG+AGG | + | chr4.1:62954812-62954831 | MS.gene72534:CDS | 45.0% | |
| TGACTCAAATTGGACTGACC+GGG | + | chr4.1:62955935-62955954 | MS.gene72534:CDS | 45.0% | |
| TGAGGGAACAGAATTGACCT+CGG | - | chr4.1:62956183-62956202 | None:intergenic | 45.0% | |
| TGGAAAAGAAAAACTCGGCG+AGG | + | chr4.1:62954381-62954400 | MS.gene72534:CDS | 45.0% | |
| TGGAATGTTCAGGTGAAACC+AGG | - | chr4.1:62955446-62955465 | None:intergenic | 45.0% | |
| TGTGTTGCACAAAAACCCCT+TGG | + | chr4.1:62955738-62955757 | MS.gene72534:CDS | 45.0% | |
| TTCCATCATGCAACAGCACA+TGG | - | chr4.1:62954366-62954385 | None:intergenic | 45.0% | |
| TTCTGTTGGTGCAGGTTTGT+CGG | + | chr4.1:62954264-62954283 | MS.gene72534:CDS | 45.0% | |
| ! | CTCAGCTGCTTGCGTTTTAT+CGG | + | chr4.1:62955124-62955143 | MS.gene72534:CDS | 45.0% |
| ! | GAATCTGGAGTCCCATTCAT+TGG | - | chr4.1:62955393-62955412 | None:intergenic | 45.0% |
| ! | GATGTTGGTGAAACCCTAGA+TGG | + | chr4.1:62953486-62953505 | MS.gene72534:CDS | 45.0% |
| !! | ACTTTGTGAAGGCGTTGACA+AGG | + | chr4.1:62955179-62955198 | MS.gene72534:CDS | 45.0% |
| !! | GCTTGTTATGAACTTTGCCG+AGG | + | chr4.1:62956163-62956182 | MS.gene72534:CDS | 45.0% |
| !! | GTAATCACAAGTGTCGGTGT+CGG | - | chr4.1:62954151-62954170 | None:intergenic | 45.0% |
| !! | GTGATTCTGTTAAGGGTGCT+GGG | + | chr4.1:62953553-62953572 | MS.gene72534:CDS | 45.0% |
| !! | TACTGGTGGCTTTGATCGAT+TGG | + | chr4.1:62955083-62955102 | MS.gene72534:CDS | 45.0% |
| !! | TAGGCGTTTTGGACGACTAA+AGG | + | chr4.1:62956226-62956245 | MS.gene72534:CDS | 45.0% |
| !! | TGATTCTGTTAAGGGTGCTG+GGG | + | chr4.1:62953554-62953573 | MS.gene72534:CDS | 45.0% |
| !! | TTTTGTACATGCCGATTGGG+GGG | + | chr4.1:62953640-62953659 | MS.gene72534:CDS | 45.0% |
| AAACTACCCATGGCTGGAAC+TGG | + | chr4.1:62955882-62955901 | MS.gene72534:CDS | 50.0% | |
| AAGTGAGAACCTACCCATGG+TGG | + | chr4.1:62954647-62954666 | MS.gene72534:CDS | 50.0% | |
| AATAAGCATCACACGTGGGG+TGG | + | chr4.1:62954987-62955006 | MS.gene72534:CDS | 50.0% | |
| AATATCTGTCCAGGCCACCA+TGG | - | chr4.1:62954664-62954683 | None:intergenic | 50.0% | |
| ACCAACATCATGGGCCACAA+TGG | - | chr4.1:62953475-62953494 | None:intergenic | 50.0% | |
| ACCATTGTGGCCCATGATGT+TGG | + | chr4.1:62953471-62953490 | MS.gene72534:CDS | 50.0% | |
| AGATGGGTCTGTGGAATGTG+GGG | + | chr4.1:62953503-62953522 | MS.gene72534:CDS | 50.0% | |
| AGCCAGACTGTAGACAACAC+TGG | + | chr4.1:62954952-62954971 | MS.gene72534:CDS | 50.0% | |
| AGCCAGCCCAAGTTAATCGT+AGG | + | chr4.1:62956051-62956070 | MS.gene72534:CDS | 50.0% | |
| AGGACGTCAGACCCAATGAA+TGG | + | chr4.1:62955378-62955397 | MS.gene72534:CDS | 50.0% | |
| AGTCGACAGAGCAAGCAAAC+GGG | + | chr4.1:62956262-62956281 | MS.gene72534:CDS | 50.0% | |
| ATATCTGTCCAGGCCACCAT+GGG | - | chr4.1:62954663-62954682 | None:intergenic | 50.0% | |
| ATCAGATCCAGTTCCAGCCA+TGG | - | chr4.1:62955892-62955911 | None:intergenic | 50.0% | |
| ATCCCTCAGATGCATCTGAG+TGG | + | chr4.1:62954686-62954705 | MS.gene72534:CDS | 50.0% | |
| CAATCACCGTCTCGAGAATC+TGG | - | chr4.1:62955408-62955427 | None:intergenic | 50.0% | |
| CACATTCCACAGACCCATCT+AGG | - | chr4.1:62953503-62953522 | None:intergenic | 50.0% | |
| CGGATATAGTTGGCACCAAG+AGG | + | chr4.1:62955853-62955872 | MS.gene72534:CDS | 50.0% | |
| CTAGATGGGTCTGTGGAATG+TGG | + | chr4.1:62953501-62953520 | MS.gene72534:CDS | 50.0% | |
| GCAAAGTGAGAACCTACCCA+TGG | + | chr4.1:62954644-62954663 | MS.gene72534:CDS | 50.0% | |
| GCCAGACTGTAGACAACACT+GGG | + | chr4.1:62954953-62954972 | MS.gene72534:CDS | 50.0% | |
| GGACGTCAGACCCAATGAAT+GGG | + | chr4.1:62955379-62955398 | MS.gene72534:CDS | 50.0% | |
| TCAGATCCAGTTCCAGCCAT+GGG | - | chr4.1:62955891-62955910 | None:intergenic | 50.0% | |
| TCAGGTGAAACCAGGTGATC+TGG | - | chr4.1:62955438-62955457 | None:intergenic | 50.0% | |
| TCCCAGTGTTGTCTACAGTC+TGG | - | chr4.1:62954957-62954976 | None:intergenic | 50.0% | |
| TCCCTCAGATGCATCTGAGT+GGG | + | chr4.1:62954687-62954706 | MS.gene72534:CDS | 50.0% | |
| TCGGCGAGGAGTCAAATATG+AGG | + | chr4.1:62954395-62954414 | MS.gene72534:CDS | 50.0% | |
| TGAAACCCTAGATGGGTCTG+TGG | + | chr4.1:62953494-62953513 | MS.gene72534:CDS | 50.0% | |
| TGAAGTAACCGGGTGAGCTA+CGG | - | chr4.1:62953586-62953605 | None:intergenic | 50.0% | |
| TTGTTGGACTCCAGATCACC+TGG | + | chr4.1:62955425-62955444 | MS.gene72534:CDS | 50.0% | |
| ! | AGCCATGTGCTGTTGCATGA+TGG | + | chr4.1:62954361-62954380 | MS.gene72534:CDS | 50.0% |
| ! | AGGTTGGTTCAGATGGTGGT+CGG | + | chr4.1:62954452-62954471 | MS.gene72534:CDS | 50.0% |
| ! | GCTTGTAGTTCTGTTGGTGC+AGG | + | chr4.1:62954256-62954275 | MS.gene72534:CDS | 50.0% |
| ! | GGTGATTCTGTTAAGGGTGC+TGG | + | chr4.1:62953552-62953571 | MS.gene72534:CDS | 50.0% |
| !! | GAACAGGTTGGTTCAGATGG+TGG | + | chr4.1:62954448-62954467 | MS.gene72534:CDS | 50.0% |
| !! | GCTCCTCTGCTTTTCCATTG+TGG | - | chr4.1:62954818-62954837 | None:intergenic | 50.0% |
| !! | TCGGAACAGGTTGGTTCAGA+TGG | + | chr4.1:62954445-62954464 | MS.gene72534:CDS | 50.0% |
| AGCAAGCAAACGGGCAAGAG+TGG | + | chr4.1:62956271-62956290 | MS.gene72534:CDS | 55.0% | |
| GAGGCTCCTGAAAAACCTCC+TGG | + | chr4.1:62956113-62956132 | MS.gene72534:CDS | 55.0% | |
| GATGGGTCTGTGGAATGTGG+GGG | + | chr4.1:62953504-62953523 | MS.gene72534:CDS | 55.0% | |
| GCAGGTTTGTCGGCAGCTAT+TGG | + | chr4.1:62954274-62954293 | MS.gene72534:CDS | 55.0% | |
| GCCCACTCAGATGCATCTGA+GGG | - | chr4.1:62954691-62954710 | None:intergenic | 55.0% | |
| GGGACTCCAGATTCTCGAGA+CGG | + | chr4.1:62955399-62955418 | MS.gene72534:CDS | 55.0% | |
| TGCCCACTCAGATGCATCTG+AGG | - | chr4.1:62954692-62954711 | None:intergenic | 55.0% | |
| TGTCCGTGTCCATGCTTCAC+AGG | + | chr4.1:62954218-62954237 | MS.gene72534:intron | 55.0% | |
| ! | GGCCTACGATTAACTTGGGC+TGG | - | chr4.1:62956056-62956075 | None:intergenic | 55.0% |
| ! | GGTTGGTTCAGATGGTGGTC+GGG | + | chr4.1:62954453-62954472 | MS.gene72534:CDS | 55.0% |
| !! | CGATTAACTTGGGCTGGCTC+TGG | - | chr4.1:62956050-62956069 | None:intergenic | 55.0% |
| !! | GTCGGCAGCTATTGGTAGTG+AGG | + | chr4.1:62954282-62954301 | MS.gene72534:CDS | 55.0% |
| AGAACCTACCCATGGTGGCC+TGG | + | chr4.1:62954652-62954671 | MS.gene72534:CDS | 60.0% | |
| !! | AAGTGTCGGTGTCGGACGCT+GGG | - | chr4.1:62954143-62954162 | None:intergenic | 60.0% |
| AACCGGGTGAGCTACGGCCA+CGG | - | chr4.1:62953580-62953599 | None:intergenic | 65.0% | |
| CTGTCCAGGCCACCATGGGT+AGG | - | chr4.1:62954659-62954678 | None:intergenic | 65.0% | |
| !! | CAAGTGTCGGTGTCGGACGC+TGG | - | chr4.1:62954144-62954163 | None:intergenic | 65.0% |
| !! | TGTTAAGGGTGCTGGGGCCG+TGG | + | chr4.1:62953560-62953579 | MS.gene72534:CDS | 65.0% |
| GGCCGTGGCCGTAGCTCACC+CGG | + | chr4.1:62953575-62953594 | MS.gene72534:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 62953423 | 62956433 | 62953423 | ID=MS.gene72534 |
| chr4.1 | mRNA | 62953423 | 62956433 | 62953423 | ID=MS.gene72534.t1;Parent=MS.gene72534 |
| chr4.1 | exon | 62953423 | 62954008 | 62953423 | ID=MS.gene72534.t1.exon1;Parent=MS.gene72534.t1 |
| chr4.1 | CDS | 62953423 | 62954008 | 62953423 | ID=cds.MS.gene72534.t1;Parent=MS.gene72534.t1 |
| chr4.1 | exon | 62954248 | 62956433 | 62954248 | ID=MS.gene72534.t1.exon2;Parent=MS.gene72534.t1 |
| chr4.1 | CDS | 62954248 | 62956433 | 62954248 | ID=cds.MS.gene72534.t1;Parent=MS.gene72534.t1 |
| Gene Sequence |
| Protein sequence |
