Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72649.t1 | XP_003612352.1 | 88.9 | 460 | 46 | 3 | 1 | 460 | 1 | 455 | 4.00E-234 | 820.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72649.t1 | Q9BQ67 | 43.8 | 450 | 214 | 10 | 16 | 454 | 19 | 440 | 3.5e-85 | 317.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72649.t1 | G7K171 | 88.9 | 460 | 46 | 3 | 1 | 460 | 1 | 455 | 2.9e-234 | 820.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene011268 | MS.gene72649 | PPI |
| MS.gene053297 | MS.gene72649 | PPI |
| MS.gene72649 | MS.gene052717 | PPI |
| MS.gene26959 | MS.gene72649 | PPI |
| MS.gene72649 | MS.gene24284 | PPI |
| MS.gene53345 | MS.gene72649 | PPI |
| MS.gene27317 | MS.gene72649 | PPI |
| MS.gene07852 | MS.gene72649 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72649.t1 | MTR_5g024090 | 89.783 | 460 | 42 | 3 | 1 | 460 | 1 | 455 | 0.0 | 795 |
| MS.gene72649.t1 | MTR_8g080700 | 80.258 | 466 | 80 | 5 | 1 | 460 | 1 | 460 | 0.0 | 703 |
| MS.gene72649.t1 | MTR_4g096880 | 27.725 | 422 | 241 | 14 | 47 | 455 | 29 | 399 | 5.35e-35 | 135 |
| MS.gene72649.t1 | MTR_4g073080 | 30.820 | 305 | 170 | 11 | 151 | 450 | 109 | 377 | 2.70e-28 | 116 |
| MS.gene72649.t1 | MTR_2g039250 | 28.615 | 325 | 188 | 10 | 149 | 450 | 151 | 454 | 1.43e-26 | 112 |
| MS.gene72649.t1 | MTR_2g100090 | 26.706 | 337 | 189 | 14 | 149 | 450 | 110 | 423 | 3.70e-22 | 99.4 |
| MS.gene72649.t1 | MTR_2g016160 | 27.513 | 189 | 116 | 6 | 210 | 394 | 99 | 270 | 9.77e-13 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72649.t1 | AT2G19540 | 64.062 | 448 | 148 | 7 | 18 | 460 | 20 | 459 | 0.0 | 554 |
| MS.gene72649.t1 | AT5G58230 | 31.034 | 377 | 216 | 15 | 92 | 455 | 54 | 399 | 6.41e-38 | 143 |
| MS.gene72649.t1 | AT2G16780 | 26.932 | 427 | 256 | 13 | 31 | 450 | 8 | 385 | 3.79e-35 | 135 |
| MS.gene72649.t1 | AT4G35050 | 26.464 | 427 | 258 | 14 | 31 | 450 | 9 | 386 | 9.47e-35 | 134 |
| MS.gene72649.t1 | AT2G19520 | 26.380 | 326 | 197 | 9 | 149 | 450 | 157 | 463 | 2.60e-24 | 105 |
| MS.gene72649.t1 | AT4G29730 | 25.378 | 331 | 194 | 8 | 149 | 450 | 137 | 443 | 1.52e-21 | 97.4 |
| MS.gene72649.t1 | AT4G29730 | 25.000 | 312 | 182 | 7 | 149 | 432 | 137 | 424 | 3.15e-21 | 96.3 |
| MS.gene72649.t1 | AT4G29730 | 25.000 | 312 | 182 | 7 | 149 | 432 | 137 | 424 | 3.15e-21 | 96.3 |
| MS.gene72649.t1 | AT1G29260 | 26.455 | 189 | 118 | 6 | 210 | 394 | 98 | 269 | 7.26e-12 | 66.6 |
| MS.gene72649.t1 | AT4G34460 | 25.946 | 185 | 127 | 4 | 209 | 390 | 146 | 323 | 8.33e-12 | 67.0 |
| MS.gene72649.t1 | AT4G34460 | 25.946 | 185 | 127 | 4 | 209 | 390 | 141 | 318 | 8.60e-12 | 67.0 |
| MS.gene72649.t1 | AT4G34460 | 25.946 | 185 | 127 | 4 | 209 | 390 | 146 | 323 | 8.73e-12 | 67.0 |
| MS.gene72649.t1 | AT5G13480 | 27.381 | 168 | 105 | 5 | 232 | 399 | 221 | 371 | 1.08e-11 | 67.4 |
| MS.gene72649.t1 | AT4G34460 | 25.946 | 185 | 127 | 4 | 209 | 390 | 84 | 261 | 1.09e-11 | 66.2 |
| MS.gene72649.t1 | AT5G13480 | 27.381 | 168 | 105 | 5 | 232 | 399 | 209 | 359 | 1.24e-11 | 67.4 |
| MS.gene72649.t1 | AT5G13480 | 27.381 | 168 | 105 | 5 | 232 | 399 | 209 | 359 | 1.28e-11 | 67.4 |
| MS.gene72649.t1 | AT5G13480 | 27.381 | 168 | 105 | 5 | 232 | 399 | 232 | 382 | 1.43e-11 | 67.0 |
| MS.gene72649.t1 | AT3G63460 | 22.727 | 242 | 148 | 9 | 216 | 451 | 121 | 329 | 1.75e-11 | 67.0 |
| MS.gene72649.t1 | AT3G63460 | 22.727 | 242 | 148 | 9 | 216 | 451 | 121 | 329 | 2.00e-11 | 67.0 |
| MS.gene72649.t1 | AT3G63460 | 22.727 | 242 | 148 | 9 | 216 | 451 | 121 | 329 | 2.06e-11 | 67.0 |
Find 119 sgRNAs with CRISPR-Local
Find 300 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTAAAGTATCTAATATTTC+TGG | 0.117527 | 5.4:+15536636 | MS.gene72649:CDS |
| GGGTGCCAGTGCAGTTCTTT+AGG | 0.168274 | 5.4:-15540326 | None:intergenic |
| TTTAGACGCCAGTAGTTTAT+TGG | 0.214383 | 5.4:+15539306 | MS.gene72649:CDS |
| ATTGACCAAACTCCCTTTAC+TGG | 0.228674 | 5.4:+15538877 | MS.gene72649:CDS |
| ATATTGGATGGCCTTGTCTT+AGG | 0.248468 | 5.4:+15536059 | MS.gene72649:CDS |
| ACTATCATTCCAGGAATCTT+TGG | 0.249677 | 5.4:-15540347 | None:intergenic |
| GGTGCCAGTGCAGTTCTTTA+GGG | 0.253031 | 5.4:-15540325 | None:intergenic |
| AAACCTTCTTGGAATTCTAT+TGG | 0.254653 | 5.4:+15536609 | MS.gene72649:CDS |
| CTCCCCATGATGCACATATA+TGG | 0.259643 | 5.4:-15536940 | None:intergenic |
| TGGATAAAAGCATTGCAATA+TGG | 0.294456 | 5.4:+15539107 | MS.gene72649:CDS |
| TTCTTCAGTGCCACAGCTTC+CGG | 0.301659 | 5.4:+15535946 | MS.gene72649:CDS |
| AACCTTCTTGGAATTCTATT+GGG | 0.322573 | 5.4:+15536610 | MS.gene72649:CDS |
| CCCAGGCTGAGAAACCTTCT+TGG | 0.327782 | 5.4:+15536598 | MS.gene72649:intron |
| AGTTGGGGAGGCAGATCTTC+AGG | 0.338811 | 5.4:-15540087 | None:intergenic |
| TTGCAGAGTCACCAGTTTCA+TGG | 0.348687 | 5.4:-15536683 | None:intergenic |
| CACTGGCACCCAAAGATTCC+TGG | 0.354543 | 5.4:+15540338 | MS.gene72649:CDS |
| CAGGAGCCCTTACTTGTCCT+TGG | 0.358107 | 5.4:-15540068 | None:intergenic |
| AATGAAGGAAAGCTTATATC+TGG | 0.359427 | 5.4:+15538693 | MS.gene72649:CDS |
| CCAGGTTGCCACACTTTAAC+CGG | 0.362889 | 5.4:-15535965 | None:intergenic |
| CCAAGGAGTTGATGTAGTTC+AGG | 0.372282 | 5.4:+15538611 | MS.gene72649:CDS |
| AAGATGAAGAAGGTGTTGTC+GGG | 0.385596 | 5.4:+15536742 | MS.gene72649:CDS |
| ACTACTGGCGTCTAAACTAT+TGG | 0.386386 | 5.4:-15539299 | None:intergenic |
| TCCACACACAGTGTACTTCA+TGG | 0.396819 | 5.4:+15536212 | MS.gene72649:CDS |
| CTATCATTCCAGGAATCTTT+GGG | 0.398142 | 5.4:-15540346 | None:intergenic |
| TCCCCATGATGCACATATAT+GGG | 0.405787 | 5.4:-15536939 | None:intergenic |
| CTGGTGAATAAATAATAGTT+GGG | 0.415023 | 5.4:-15540103 | None:intergenic |
| TCATGATCTCAGATCGCTTA+AGG | 0.424334 | 5.4:+15539360 | MS.gene72649:CDS |
| GGATAAAAGCATTGCAATAT+GGG | 0.425531 | 5.4:+15539108 | MS.gene72649:CDS |
| GTAAAGTATCTAATATTTCT+GGG | 0.426041 | 5.4:+15536637 | MS.gene72649:CDS |
| CCTGGTGAATAAATAATAGT+TGG | 0.428338 | 5.4:-15540104 | None:intergenic |
| GCCAGTAGTTTATTGGCATC+TGG | 0.429779 | 5.4:+15539313 | MS.gene72649:CDS |
| TTTGTGGCATGGAGCGTATC+CGG | 0.429972 | 5.4:-15536913 | None:intergenic |
| CTCAAATGTTTGAAGGCATA+AGG | 0.430805 | 5.4:-15540397 | None:intergenic |
| CTCATGAAGGTTGTATCAAC+CGG | 0.432321 | 5.4:+15536894 | MS.gene72649:CDS |
| TATGTCCAGTAAAGGGAGTT+TGG | 0.438747 | 5.4:-15538882 | None:intergenic |
| AACTCCCTTTACTGGACATA+CGG | 0.442897 | 5.4:+15538885 | MS.gene72649:CDS |
| CTAGAAACCAAGGACAAGTA+AGG | 0.446924 | 5.4:+15540061 | MS.gene72649:CDS |
| GCAGTAGATACTATCATTCC+AGG | 0.447643 | 5.4:-15540356 | None:intergenic |
| TGTAGAAAGGGACGAGGAAG+AGG | 0.460518 | 5.4:+15540023 | MS.gene72649:CDS |
| AATCCTTTGCCATAGAATAT+GGG | 0.473001 | 5.4:+15539993 | MS.gene72649:intron |
| TTGGCATCTGGTAGTGATGA+TGG | 0.473663 | 5.4:+15539325 | MS.gene72649:CDS |
| GAGGAAGTTGCCTGCAAAGT+AGG | 0.474817 | 5.4:-15536768 | None:intergenic |
| GAAGATGAAGAAGGTGTTGT+CGG | 0.483253 | 5.4:+15536741 | MS.gene72649:CDS |
| GCCCCATATATGTGCATCAT+GGG | 0.490939 | 5.4:+15536937 | MS.gene72649:CDS |
| TTTGTTTGCTTCTTGTTCTG+TGG | 0.493928 | 5.4:+15539087 | MS.gene72649:CDS |
| TGGATGTGATCGGATGCTTA+TGG | 0.494883 | 5.4:-15539787 | None:intergenic |
| CCTCGTCCCTTTCTACAGAT+AGG | 0.495464 | 5.4:-15540017 | None:intergenic |
| ATGAAGGTTATGCTATAGAC+TGG | 0.497227 | 5.4:+15538661 | MS.gene72649:CDS |
| CCAACTATTATTTATTCACC+AGG | 0.500322 | 5.4:+15540104 | MS.gene72649:CDS |
| GAGTCACCAGTTTCATGGTT+AGG | 0.501994 | 5.4:-15536678 | None:intergenic |
| CCGGTGCCTAACCATGAAAC+TGG | 0.502226 | 5.4:+15536672 | MS.gene72649:CDS |
| CCGGTTAAAGTGTGGCAACC+TGG | 0.505159 | 5.4:+15535965 | MS.gene72649:CDS |
| TCTTCCAACTTGTCCACACC+AGG | 0.505184 | 5.4:-15535983 | None:intergenic |
| GGGTGCTCTCAAATGTTTGA+AGG | 0.507205 | 5.4:-15540404 | None:intergenic |
| TGAATGTATTGTCATGGAAC+AGG | 0.507712 | 5.4:+15539185 | MS.gene72649:CDS |
| CAATATGGGATACTCGTTGT+AGG | 0.507873 | 5.4:+15539122 | MS.gene72649:CDS |
| CACACAGTGTACTTCATGGC+AGG | 0.508453 | 5.4:+15536216 | MS.gene72649:CDS |
| ACAGAAATGCAAGGTGTCCA+AGG | 0.509506 | 5.4:+15538594 | MS.gene72649:CDS |
| TATGGGACCTATCTGTAGAA+AGG | 0.512379 | 5.4:+15540010 | MS.gene72649:CDS |
| CAATAATAATATTTATCTGT+GGG | 0.519586 | 5.4:+15538828 | MS.gene72649:CDS |
| TGTGCATCATGGGGAGACTC+TGG | 0.522901 | 5.4:+15536947 | MS.gene72649:CDS |
| CCTGAACTACATCAACTCCT+TGG | 0.523733 | 5.4:-15538611 | None:intergenic |
| AGCCCCATATATGTGCATCA+TGG | 0.524674 | 5.4:+15536936 | MS.gene72649:CDS |
| GCAAACAAATTCTCCTCTGT+AGG | 0.525480 | 5.4:-15539073 | None:intergenic |
| GACTGGAGTCGTCAGAATGA+AGG | 0.526073 | 5.4:+15538678 | MS.gene72649:CDS |
| GATATTGTTCAAGACACCTC+AGG | 0.534595 | 5.4:+15536171 | MS.gene72649:CDS |
| CTACCCGTATGTCCAGTAAA+GGG | 0.534623 | 5.4:-15538889 | None:intergenic |
| ATGGGACCTATCTGTAGAAA+GGG | 0.534636 | 5.4:+15540011 | MS.gene72649:CDS |
| ACCAGATGCCAATAAACTAC+TGG | 0.537920 | 5.4:-15539314 | None:intergenic |
| GGGAGACTCTGGTCATGTGC+AGG | 0.540008 | 5.4:+15536958 | MS.gene72649:CDS |
| TTCTGGGAAGACACGTGAGC+CGG | 0.540677 | 5.4:+15536653 | MS.gene72649:CDS |
| CCAGTTTCATGGTTAGGCAC+CGG | 0.540898 | 5.4:-15536672 | None:intergenic |
| ACTACCCGTATGTCCAGTAA+AGG | 0.541370 | 5.4:-15538890 | None:intergenic |
| ATAGTATCTACTGCATCAGA+TGG | 0.552548 | 5.4:+15540365 | MS.gene72649:CDS |
| GCGAAAGAAGAAGCATTGAC+TGG | 0.554097 | 5.4:-15539821 | None:intergenic |
| GCAATAATAATATTTATCTG+TGG | 0.554630 | 5.4:+15538827 | MS.gene72649:CDS |
| CAAACAAATTCTCCTCTGTA+GGG | 0.564185 | 5.4:-15539072 | None:intergenic |
| TGAAGAGAGTTGTAAGCAGA+AGG | 0.566080 | 5.4:-15536028 | None:intergenic |
| TTCCATGTTGCAGCAGATGT+AGG | 0.568203 | 5.4:-15538853 | None:intergenic |
| ATCCCAATAGAATTCCAAGA+AGG | 0.572795 | 5.4:-15536612 | None:intergenic |
| GATGATAGTGAAGATGAAGA+AGG | 0.575436 | 5.4:+15536732 | MS.gene72649:CDS |
| GTTCGCACCTACAGTTGCGG+AGG | 0.578131 | 5.4:+15536867 | MS.gene72649:intron |
| TGAAACTGGTGACTCTGCAA+TGG | 0.580008 | 5.4:+15536686 | MS.gene72649:CDS |
| AGCCTACATCTGCTGCAACA+TGG | 0.586634 | 5.4:+15538851 | MS.gene72649:CDS |
| GTACTTCATGGCAGGGACAC+AGG | 0.587280 | 5.4:+15536224 | MS.gene72649:CDS |
| TAGAAACCAAGGACAAGTAA+GGG | 0.588824 | 5.4:+15540062 | MS.gene72649:CDS |
| ATTGACTGGATTCCACTCAA+TGG | 0.589690 | 5.4:-15539807 | None:intergenic |
| TTGCGGAGGGTAACTCATGA+AGG | 0.591600 | 5.4:+15536881 | MS.gene72649:CDS |
| TAAAGTGTGGCAACCTGGTG+TGG | 0.592539 | 5.4:+15535970 | MS.gene72649:CDS |
| TGAATAAATAATAGTTGGGG+AGG | 0.598369 | 5.4:-15540099 | None:intergenic |
| GCAACCTGGTGTGGACAAGT+TGG | 0.600154 | 5.4:+15535979 | MS.gene72649:CDS |
| AGAAAGGGACGAGGAAGAGG+AGG | 0.601145 | 5.4:+15540026 | MS.gene72649:CDS |
| CTGATGTGAATGTATTGTCA+TGG | 0.604527 | 5.4:+15539179 | MS.gene72649:CDS |
| TGGCATCTGGTAGTGATGAT+GGG | 0.604805 | 5.4:+15539326 | MS.gene72649:CDS |
| CACACTTTAACCGGAAGCTG+TGG | 0.608669 | 5.4:-15535956 | None:intergenic |
| TTACGTGAGCTGATTATCAG+AGG | 0.612783 | 5.4:-15539852 | None:intergenic |
| AATACCCTAAAGAACTGCAC+TGG | 0.613846 | 5.4:+15540321 | MS.gene72649:CDS |
| CACAGCTTCCGGTTAAAGTG+TGG | 0.618649 | 5.4:+15535957 | MS.gene72649:CDS |
| ACTCCCTTTACTGGACATAC+GGG | 0.621217 | 5.4:+15538886 | MS.gene72649:CDS |
| CCTATCTGTAGAAAGGGACG+AGG | 0.621911 | 5.4:+15540017 | MS.gene72649:CDS |
| CCCCATGATGCACATATATG+GGG | 0.623982 | 5.4:-15536938 | None:intergenic |
| TGTGCTATAAAAGTCAACAT+TGG | 0.624729 | 5.4:-15539151 | None:intergenic |
| ATCCGATCACATCCATTGAG+TGG | 0.636743 | 5.4:+15539795 | MS.gene72649:CDS |
| TATGGGATACTCGTTGTAGG+AGG | 0.638598 | 5.4:+15539125 | MS.gene72649:CDS |
| AGATGAAGAAGGTGTTGTCG+GGG | 0.641716 | 5.4:+15536743 | MS.gene72649:CDS |
| ACACAGTGTACTTCATGGCA+GGG | 0.642672 | 5.4:+15536217 | MS.gene72649:CDS |
| ATAGGAAGGGAAAGATCATG+TGG | 0.643718 | 5.4:+15539748 | MS.gene72649:intron |
| GCCATGAAGTACACTGTGTG+TGG | 0.644972 | 5.4:-15536213 | None:intergenic |
| TTCCACTCAATGGATGTGAT+CGG | 0.647949 | 5.4:-15539797 | None:intergenic |
| CCTGCAGTGGAGCCCTACAG+AGG | 0.652615 | 5.4:+15539060 | MS.gene72649:intron |
| TTCGCACCTACAGTTGCGGA+GGG | 0.656554 | 5.4:+15536868 | MS.gene72649:intron |
| GATGAAGAAGGTGTTGTCGG+GGG | 0.660596 | 5.4:+15536744 | MS.gene72649:CDS |
| TGGTGAATAAATAATAGTTG+GGG | 0.664659 | 5.4:-15540102 | None:intergenic |
| GAATTTATAGCTAGAAACCA+AGG | 0.672979 | 5.4:+15540051 | MS.gene72649:CDS |
| CCCCATATATGTGCATCATG+GGG | 0.675644 | 5.4:+15536938 | MS.gene72649:CDS |
| CTAGCAGAGACAGAAATGCA+AGG | 0.682289 | 5.4:+15538585 | MS.gene72649:CDS |
| TGACTCTGCAATGGATAGTG+AGG | 0.687260 | 5.4:+15536695 | MS.gene72649:CDS |
| TATGGAAATTACCTAAGACA+AGG | 0.706154 | 5.4:-15536070 | None:intergenic |
| TAGTGAGGACAGTGACAGTG+AGG | 0.744988 | 5.4:+15536710 | MS.gene72649:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGCAAAAAATTAAATCATA+AGG | - | chr5.4:15536997-15537016 | None:intergenic | 15.0% |
| !! | CAATAATAATATTTATCTGT+GGG | + | chr5.4:15538828-15538847 | MS.gene72649:CDS | 15.0% |
| !! | GTTATGTTAAAATCAAATAT+AGG | - | chr5.4:15537234-15537253 | None:intergenic | 15.0% |
| !! | TCATCTTTAATAAATAACAA+AGG | - | chr5.4:15539705-15539724 | None:intergenic | 15.0% |
| !!! | TACTTTAAAAAATGCATTAA+TGG | - | chr5.4:15539588-15539607 | None:intergenic | 15.0% |
| !!! | TTAAATTATGAACAACTTTT+TGG | - | chr5.4:15537438-15537457 | None:intergenic | 15.0% |
| !!! | TTATACAAAAGTATATGAAT+CGG | - | chr5.4:15538506-15538525 | None:intergenic | 15.0% |
| !! | AAAGGTAATGATAAAGAAAA+AGG | - | chr5.4:15539954-15539973 | None:intergenic | 20.0% |
| !! | AAGCAAAAAATAATATACCT+TGG | - | chr5.4:15535825-15535844 | None:intergenic | 20.0% |
| !! | AAGGTAATGATAAAGAAAAA+GGG | - | chr5.4:15539953-15539972 | None:intergenic | 20.0% |
| !! | ACCTTAACTAAGTAAATATT+CGG | + | chr5.4:15537348-15537367 | MS.gene72649:intron | 20.0% |
| !! | AGTTGATCTTACTAATAATT+TGG | + | chr5.4:15536840-15536859 | MS.gene72649:intron | 20.0% |
| !! | CTTCATATATGATAAAAATG+AGG | + | chr5.4:15538339-15538358 | MS.gene72649:intron | 20.0% |
| !! | GCAATAATAATATTTATCTG+TGG | + | chr5.4:15538827-15538846 | MS.gene72649:CDS | 20.0% |
| !! | TAATAAAAACTGAAATGAAG+AGG | - | chr5.4:15536790-15536809 | None:intergenic | 20.0% |
| !!! | ATTTCATTTAACTTGAAACA+GGG | + | chr5.4:15540293-15540312 | MS.gene72649:intron | 20.0% |
| !!! | ATTTTGATTCTAATGAGTTA+AGG | + | chr5.4:15537943-15537962 | MS.gene72649:intron | 20.0% |
| !!! | CAAAACTTTTAAAAATCCAA+AGG | - | chr5.4:15539972-15539991 | None:intergenic | 20.0% |
| !!! | GCTAAAATTTAAGAATTTTC+AGG | - | chr5.4:15538404-15538423 | None:intergenic | 20.0% |
| !!! | GTAAAGTATCTAATATTTCT+GGG | + | chr5.4:15536637-15536656 | MS.gene72649:CDS | 20.0% |
| !!! | TATTGATACAAGTTCTAAAA+GGG | - | chr5.4:15537277-15537296 | None:intergenic | 20.0% |
| !!! | TATTTCATTTAACTTGAAAC+AGG | + | chr5.4:15540292-15540311 | MS.gene72649:intron | 20.0% |
| !!! | TCAAAATGACAAAATCTTTT+TGG | - | chr5.4:15537930-15537949 | None:intergenic | 20.0% |
| !!! | TGATTTAATTTTTTGCTTTG+TGG | + | chr5.4:15536999-15537018 | MS.gene72649:intron | 20.0% |
| !!! | TGTAAAGTATCTAATATTTC+TGG | + | chr5.4:15536636-15536655 | MS.gene72649:CDS | 20.0% |
| !!! | TTATTGATACAAGTTCTAAA+AGG | - | chr5.4:15537278-15537297 | None:intergenic | 20.0% |
| !!! | TTCAAGTTAAATGAAATAAG+AGG | - | chr5.4:15540290-15540309 | None:intergenic | 20.0% |
| !!! | TTTTTCTTTATCATTACCTT+TGG | + | chr5.4:15539953-15539972 | MS.gene72649:intron | 20.0% |
| ! | AACTATTCATTACCAATCAA+AGG | + | chr5.4:15536314-15536333 | MS.gene72649:intron | 25.0% |
| ! | AAGTAATGAATTTGTAGATC+TGG | + | chr5.4:15538538-15538557 | MS.gene72649:intron | 25.0% |
| ! | AAGTTTAAGCACAAAAATGA+AGG | + | chr5.4:15538645-15538664 | MS.gene72649:CDS | 25.0% |
| ! | AATAACAAAGGCAAAATAGT+TGG | - | chr5.4:15539693-15539712 | None:intergenic | 25.0% |
| ! | AATATGTTGTTAGGACATAA+GGG | - | chr5.4:15539470-15539489 | None:intergenic | 25.0% |
| ! | ACCGAATATTTACTTAGTTA+AGG | - | chr5.4:15537352-15537371 | None:intergenic | 25.0% |
| ! | ACTATTCATTACCAATCAAA+GGG | + | chr5.4:15536315-15536334 | MS.gene72649:intron | 25.0% |
| ! | ACTTAATATGTTGAGAAAAG+TGG | - | chr5.4:15540140-15540159 | None:intergenic | 25.0% |
| ! | AGTAATGAATTTGTAGATCT+GGG | + | chr5.4:15538539-15538558 | MS.gene72649:intron | 25.0% |
| ! | ATAAGGGAAAAAGAATAATC+AGG | - | chr5.4:15539454-15539473 | None:intergenic | 25.0% |
| ! | ATTAATGGTACTTGATTCAA+AGG | - | chr5.4:15539573-15539592 | None:intergenic | 25.0% |
| ! | ATTTCAAAGATTAACTTACG+AGG | - | chr5.4:15538121-15538140 | None:intergenic | 25.0% |
| ! | CAACATGAAGAGATATATAA+TGG | - | chr5.4:15539251-15539270 | None:intergenic | 25.0% |
| ! | CAGAAATTAAACAAAACGTA+TGG | - | chr5.4:15536091-15536110 | None:intergenic | 25.0% |
| ! | CATATATGAAGAAATATACC+TGG | - | chr5.4:15538330-15538349 | None:intergenic | 25.0% |
| ! | CTGGTGAATAAATAATAGTT+GGG | - | chr5.4:15540106-15540125 | None:intergenic | 25.0% |
| ! | TAATATGTTGTTAGGACATA+AGG | - | chr5.4:15539471-15539490 | None:intergenic | 25.0% |
| ! | TCAACTTAAATTTATCTGAG+AGG | + | chr5.4:15539496-15539515 | MS.gene72649:intron | 25.0% |
| ! | TGCTTTAGTTATGTCATATT+TGG | + | chr5.4:15539419-15539438 | MS.gene72649:intron | 25.0% |
| ! | TGGTGAATAAATAATAGTTG+GGG | - | chr5.4:15540105-15540124 | None:intergenic | 25.0% |
| !! | ATAAAGCCTTAAAACTTGTT+AGG | - | chr5.4:15539926-15539945 | None:intergenic | 25.0% |
| !! | ATGTGTTGTTATAAACCAAA+AGG | - | chr5.4:15537141-15537160 | None:intergenic | 25.0% |
| !! | CAAATTCCTAACAAGTTTTA+AGG | + | chr5.4:15539917-15539936 | MS.gene72649:intron | 25.0% |
| !! | TGATGATGTAATATGTTGTT+AGG | - | chr5.4:15539479-15539498 | None:intergenic | 25.0% |
| !!! | AAATGCATTATTTTGTGGAT+AGG | + | chr5.4:15539730-15539749 | MS.gene72649:intron | 25.0% |
| !!! | AATATACCTTGGTCTTTTTT+TGG | - | chr5.4:15535814-15535833 | None:intergenic | 25.0% |
| !!! | CGACTTTATTGTTTTAGTTA+CGG | + | chr5.4:15538031-15538050 | MS.gene72649:intron | 25.0% |
| !!! | GAATTTTCAGGAATTTCAAT+AGG | - | chr5.4:15538392-15538411 | None:intergenic | 25.0% |
| !!! | GAGAATTTTTTGTCCTTTAA+TGG | + | chr5.4:15536382-15536401 | MS.gene72649:intron | 25.0% |
| !!! | GTTACAAGTTTGATTTGATA+TGG | + | chr5.4:15538294-15538313 | MS.gene72649:intron | 25.0% |
| !!! | TAACTAGCTTTGAATTTTGT+CGG | - | chr5.4:15538278-15538297 | None:intergenic | 25.0% |
| !!! | TAATAAGTGCTGACAAAATA+TGG | - | chr5.4:15537785-15537804 | None:intergenic | 25.0% |
| !!! | TAGAGAGTTATTTTCTGAAT+TGG | + | chr5.4:15537382-15537401 | MS.gene72649:intron | 25.0% |
| !!! | TATAATGGAAATTGAGTTGA+CGG | - | chr5.4:15539236-15539255 | None:intergenic | 25.0% |
| !!! | TGAACCAAGTTATTTCTATT+GGG | + | chr5.4:15537598-15537617 | MS.gene72649:intron | 25.0% |
| !!! | TGTGAAAATGCATTATTTTG+TGG | + | chr5.4:15539725-15539744 | MS.gene72649:intron | 25.0% |
| !!! | TTAAATTTTAGCAGTAGCTA+AGG | + | chr5.4:15538412-15538431 | MS.gene72649:intron | 25.0% |
| !!! | TTGAACCAAGTTATTTCTAT+TGG | + | chr5.4:15537597-15537616 | MS.gene72649:intron | 25.0% |
| AAACCTTCTTGGAATTCTAT+TGG | + | chr5.4:15536609-15536628 | MS.gene72649:CDS | 30.0% | |
| AAAGCGAGTATTTAAGAGTT+TGG | + | chr5.4:15537853-15537872 | MS.gene72649:intron | 30.0% | |
| AAAGCTAGAATAACATGACT+AGG | - | chr5.4:15536521-15536540 | None:intergenic | 30.0% | |
| AAAGCTCAAAAGTCCATTAA+AGG | - | chr5.4:15536398-15536417 | None:intergenic | 30.0% | |
| AACAAAAGCTACATATGAAG+AGG | - | chr5.4:15539000-15539019 | None:intergenic | 30.0% | |
| AACCTTCTTGGAATTCTATT+GGG | + | chr5.4:15536610-15536629 | MS.gene72649:CDS | 30.0% | |
| AACTCTGATTATGTTAGTGT+AGG | + | chr5.4:15537467-15537486 | MS.gene72649:intron | 30.0% | |
| AATCATTCAACATCTGTCAA+AGG | - | chr5.4:15537817-15537836 | None:intergenic | 30.0% | |
| AATCCTTTGCCATAGAATAT+GGG | + | chr5.4:15539993-15540012 | MS.gene72649:intron | 30.0% | |
| AATGAAGGAAAGCTTATATC+TGG | + | chr5.4:15538693-15538712 | MS.gene72649:CDS | 30.0% | |
| AGACACTAATTGTGAAACAT+AGG | + | chr5.4:15538075-15538094 | MS.gene72649:intron | 30.0% | |
| AGGATACAACAATGAGATAA+TGG | - | chr5.4:15539532-15539551 | None:intergenic | 30.0% | |
| AGTATTTAAGAGTTTGGAAG+TGG | + | chr5.4:15537859-15537878 | MS.gene72649:intron | 30.0% | |
| AGTTCAAAGGTTCCAAATAA+TGG | - | chr5.4:15537500-15537519 | None:intergenic | 30.0% | |
| ATAAGCCGAAAACAATTTCT+AGG | - | chr5.4:15540267-15540286 | None:intergenic | 30.0% | |
| ATCAAAACCAGAAGAAAACA+AGG | - | chr5.4:15538956-15538975 | None:intergenic | 30.0% | |
| ATCTAGCAGAATACCATAAA+GGG | + | chr5.4:15537648-15537667 | MS.gene72649:intron | 30.0% | |
| ATGTTGATCTTCATGTTTGA+AGG | + | chr5.4:15538799-15538818 | MS.gene72649:intron | 30.0% | |
| ATTATCTTACCAACGTATGT+AGG | - | chr5.4:15538217-15538236 | None:intergenic | 30.0% | |
| CATTGTGCAAATTTATATCC+GGG | + | chr5.4:15535898-15535917 | MS.gene72649:intron | 30.0% | |
| CCAACTATTATTTATTCACC+AGG | + | chr5.4:15540104-15540123 | MS.gene72649:CDS | 30.0% | |
| CCTGGTGAATAAATAATAGT+TGG | - | chr5.4:15540107-15540126 | None:intergenic | 30.0% | |
| CTGCATTTCTATAACATGTT+GGG | + | chr5.4:15538241-15538260 | MS.gene72649:intron | 30.0% | |
| GAATTTATAGCTAGAAACCA+AGG | + | chr5.4:15540051-15540070 | MS.gene72649:CDS | 30.0% | |
| GAATTTGACAAACAATTCGA+TGG | - | chr5.4:15539904-15539923 | None:intergenic | 30.0% | |
| GACACTAATTGTGAAACATA+GGG | + | chr5.4:15538076-15538095 | MS.gene72649:intron | 30.0% | |
| GATACTACAAAAGAGTTCAA+AGG | - | chr5.4:15537513-15537532 | None:intergenic | 30.0% | |
| GCATTGTGCAAATTTATATC+CGG | + | chr5.4:15535897-15535916 | MS.gene72649:intron | 30.0% | |
| TAATCCTTTGCCATAGAATA+TGG | + | chr5.4:15539992-15540011 | MS.gene72649:intron | 30.0% | |
| TATGGAAATTACCTAAGACA+AGG | - | chr5.4:15536073-15536092 | None:intergenic | 30.0% | |
| TCTGCATTTCTATAACATGT+TGG | + | chr5.4:15538240-15538259 | MS.gene72649:intron | 30.0% | |
| TGAATAAATAATAGTTGGGG+AGG | - | chr5.4:15540102-15540121 | None:intergenic | 30.0% | |
| TGTGCTATAAAAGTCAACAT+TGG | - | chr5.4:15539154-15539173 | None:intergenic | 30.0% | |
| TGTGTGTATTCATCGTTTAT+AGG | + | chr5.4:15536263-15536282 | MS.gene72649:intron | 30.0% | |
| TGTTGATCTTCATGTTTGAA+GGG | + | chr5.4:15538800-15538819 | MS.gene72649:intron | 30.0% | |
| TTATAACAACACATGTCAGT+TGG | + | chr5.4:15537147-15537166 | MS.gene72649:intron | 30.0% | |
| TTCTGTTCAACGATTATTGT+GGG | + | chr5.4:15537205-15537224 | MS.gene72649:intron | 30.0% | |
| TTTCACAATTAGTGTCTTCA+TGG | - | chr5.4:15538072-15538091 | None:intergenic | 30.0% | |
| ! | AAAAGTGGATTCAAATTACC+TGG | - | chr5.4:15540125-15540144 | None:intergenic | 30.0% |
| ! | ACAATCCTAAGTATTGCAAT+TGG | + | chr5.4:15538364-15538383 | MS.gene72649:intron | 30.0% |
| ! | CACTAATAATGATTGCCTTT+TGG | + | chr5.4:15537123-15537142 | MS.gene72649:intron | 30.0% |
| ! | GATAGTTAGCTACATGATTT+TGG | + | chr5.4:15538006-15538025 | MS.gene72649:intron | 30.0% |
| ! | TCATGCCTAGAAATTGTTTT+CGG | + | chr5.4:15540259-15540278 | MS.gene72649:intron | 30.0% |
| ! | TGTTTTGTAGACGAATATCT+AGG | + | chr5.4:15536360-15536379 | MS.gene72649:intron | 30.0% |
| ! | TTGTGCTTAAACTTTTGTAG+TGG | - | chr5.4:15538639-15538658 | None:intergenic | 30.0% |
| !! | CATTATTTTGTGGATAGGAA+GGG | + | chr5.4:15539735-15539754 | MS.gene72649:intron | 30.0% |
| !! | GGATAAAAGCATTGCAATAT+GGG | + | chr5.4:15539108-15539127 | MS.gene72649:CDS | 30.0% |
| !! | TGGATAAAAGCATTGCAATA+TGG | + | chr5.4:15539107-15539126 | MS.gene72649:CDS | 30.0% |
| !!! | GGTATTATTGCATTGACTTT+TGG | + | chr5.4:15539206-15539225 | MS.gene72649:intron | 30.0% |
| AAAGCTACATATGAAGAGGT+TGG | - | chr5.4:15538996-15539015 | None:intergenic | 35.0% | |
| AACAAAGGCAAAATAGTTGG+CGG | - | chr5.4:15539690-15539709 | None:intergenic | 35.0% | |
| AAGTACTTCCATATGCACTT+GGG | + | chr5.4:15539603-15539622 | MS.gene72649:intron | 35.0% | |
| AATATGGTACATATAGCCAG+TGG | - | chr5.4:15537769-15537788 | None:intergenic | 35.0% | |
| ACTATCATTCCAGGAATCTT+TGG | - | chr5.4:15540350-15540369 | None:intergenic | 35.0% | |
| AGAGGGAGGATACTATTAAA+AGG | + | chr5.4:15537685-15537704 | MS.gene72649:intron | 35.0% | |
| AGGTTCCAATTGCAATACTT+AGG | - | chr5.4:15538372-15538391 | None:intergenic | 35.0% | |
| ATACCATAAAGGGTTCACTT+TGG | + | chr5.4:15537658-15537677 | MS.gene72649:intron | 35.0% | |
| ATAGTATCTACTGCATCAGA+TGG | + | chr5.4:15540365-15540384 | MS.gene72649:CDS | 35.0% | |
| ATCCCAATAGAATTCCAAGA+AGG | - | chr5.4:15536615-15536634 | None:intergenic | 35.0% | |
| ATGAAGGTTATGCTATAGAC+TGG | + | chr5.4:15538661-15538680 | MS.gene72649:CDS | 35.0% | |
| ATTAGTACTTCACAGCATGT+AGG | - | chr5.4:15537544-15537563 | None:intergenic | 35.0% | |
| CAAACAAATTCTCCTCTGTA+GGG | - | chr5.4:15539075-15539094 | None:intergenic | 35.0% | |
| CACAATGCCACAAAAATTAG+AGG | - | chr5.4:15535885-15535904 | None:intergenic | 35.0% | |
| CACTAGCATGTCTTTATATC+TGG | + | chr5.4:15538753-15538772 | MS.gene72649:intron | 35.0% | |
| CCAACCCAATAGAAATAACT+TGG | - | chr5.4:15537605-15537624 | None:intergenic | 35.0% | |
| CGCAAACAAAACAGAATTCA+TGG | - | chr5.4:15536136-15536155 | None:intergenic | 35.0% | |
| CTATCATTCCAGGAATCTTT+GGG | - | chr5.4:15540349-15540368 | None:intergenic | 35.0% | |
| CTGATGTGAATGTATTGTCA+TGG | + | chr5.4:15539179-15539198 | MS.gene72649:CDS | 35.0% | |
| CTGGTTATCAAAGAGATATG+AGG | + | chr5.4:15538772-15538791 | MS.gene72649:intron | 35.0% | |
| GATCTAGCAGAATACCATAA+AGG | + | chr5.4:15537647-15537666 | MS.gene72649:intron | 35.0% | |
| GTAGGAAATGAGCCATTATT+TGG | + | chr5.4:15537485-15537504 | MS.gene72649:intron | 35.0% | |
| GTTCTGTTCAACGATTATTG+TGG | + | chr5.4:15537204-15537223 | MS.gene72649:intron | 35.0% | |
| GTTGATCTTCATGTTTGAAG+GGG | + | chr5.4:15538801-15538820 | MS.gene72649:intron | 35.0% | |
| TACCATAAAGGGTTCACTTT+GGG | + | chr5.4:15537659-15537678 | MS.gene72649:intron | 35.0% | |
| TAGAAACCAAGGACAAGTAA+GGG | + | chr5.4:15540062-15540081 | MS.gene72649:CDS | 35.0% | |
| TCTAATGAGTTAAGGTGTGT+TGG | + | chr5.4:15537951-15537970 | MS.gene72649:intron | 35.0% | |
| TGAATGTATTGTCATGGAAC+AGG | + | chr5.4:15539185-15539204 | MS.gene72649:CDS | 35.0% | |
| TGATATGGTAAACATTGTCC+AGG | + | chr5.4:15538309-15538328 | MS.gene72649:intron | 35.0% | |
| TGTACTTCAGTGTACTGAAT+AGG | + | chr5.4:15539272-15539291 | MS.gene72649:intron | 35.0% | |
| TGTCTCATGATTCAACTTAG+AGG | + | chr5.4:15536287-15536306 | MS.gene72649:intron | 35.0% | |
| TTAGCACTACAACAGTTACA+TGG | + | chr5.4:15538157-15538176 | MS.gene72649:intron | 35.0% | |
| TTAGCAGTAGCTAAGGTTAA+GGG | + | chr5.4:15538419-15538438 | MS.gene72649:intron | 35.0% | |
| TTTAGACGCCAGTAGTTTAT+TGG | + | chr5.4:15539306-15539325 | MS.gene72649:CDS | 35.0% | |
| TTTAGCAGTAGCTAAGGTTA+AGG | + | chr5.4:15538418-15538437 | MS.gene72649:intron | 35.0% | |
| TTTGTTTGCTTCTTGTTCTG+TGG | + | chr5.4:15539087-15539106 | MS.gene72649:CDS | 35.0% | |
| ! | AAAGTACTTCCATATGCACT+TGG | + | chr5.4:15539602-15539621 | MS.gene72649:intron | 35.0% |
| ! | ATGACATAACTAAAGCACCA+TGG | - | chr5.4:15539416-15539435 | None:intergenic | 35.0% |
| ! | GATGATAGTGAAGATGAAGA+AGG | + | chr5.4:15536732-15536751 | MS.gene72649:CDS | 35.0% |
| ! | GGTACAGAAAGAAAAGTACA+AGG | - | chr5.4:15539552-15539571 | None:intergenic | 35.0% |
| ! | GTGAACACCTCTAATTTTTG+TGG | + | chr5.4:15535875-15535894 | MS.gene72649:intron | 35.0% |
| ! | TCTCTTCACGCTTTTCATAT+TGG | + | chr5.4:15536043-15536062 | MS.gene72649:CDS | 35.0% |
| ! | TTCACGCTTTTCATATTGGA+TGG | + | chr5.4:15536047-15536066 | MS.gene72649:CDS | 35.0% |
| ! | TTCTTTTCGAAATATGCCTG+AGG | - | chr5.4:15536190-15536209 | None:intergenic | 35.0% |
| !! | AGTTATTTCTATTGGGTTGG+AGG | + | chr5.4:15537605-15537624 | MS.gene72649:intron | 35.0% |
| !! | CCAAGTTATTTCTATTGGGT+TGG | + | chr5.4:15537602-15537621 | MS.gene72649:intron | 35.0% |
| !! | GCATTATTTTGTGGATAGGA+AGG | + | chr5.4:15539734-15539753 | MS.gene72649:intron | 35.0% |
| !! | GTTATTTCTATTGGGTTGGA+GGG | + | chr5.4:15537606-15537625 | MS.gene72649:intron | 35.0% |
| !!! | AGTAGAACCTTGTTTTCTTC+TGG | + | chr5.4:15538946-15538965 | MS.gene72649:intron | 35.0% |
| AACTCCCTTTACTGGACATA+CGG | + | chr5.4:15538885-15538904 | MS.gene72649:CDS | 40.0% | |
| AATACCCTAAAGAACTGCAC+TGG | + | chr5.4:15540321-15540340 | MS.gene72649:CDS | 40.0% | |
| ACAAAGGCAAAATAGTTGGC+GGG | - | chr5.4:15539689-15539708 | None:intergenic | 40.0% | |
| ACATCGCCAAAAAAAGACCA+AGG | + | chr5.4:15535805-15535824 | MS.gene72649:CDS | 40.0% | |
| ACCAGATGCCAATAAACTAC+TGG | - | chr5.4:15539317-15539336 | None:intergenic | 40.0% | |
| ACTACTGGCGTCTAAACTAT+TGG | - | chr5.4:15539302-15539321 | None:intergenic | 40.0% | |
| AGAACTATCATGGCATGAAC+TGG | + | chr5.4:15539628-15539647 | MS.gene72649:intron | 40.0% | |
| AGGATCACGAATCAGATTGT+GGG | - | chr5.4:15538197-15538216 | None:intergenic | 40.0% | |
| AGTACTTCCATATGCACTTG+GGG | + | chr5.4:15539604-15539623 | MS.gene72649:intron | 40.0% | |
| ATAGGAAGGGAAAGATCATG+TGG | + | chr5.4:15539748-15539767 | MS.gene72649:intron | 40.0% | |
| ATGGGACCTATCTGTAGAAA+GGG | + | chr5.4:15540011-15540030 | MS.gene72649:CDS | 40.0% | |
| ATTCGTGATCCTACATACGT+TGG | + | chr5.4:15538205-15538224 | MS.gene72649:intron | 40.0% | |
| ATTGACCAAACTCCCTTTAC+TGG | + | chr5.4:15538877-15538896 | MS.gene72649:CDS | 40.0% | |
| ATTGACTGGATTCCACTCAA+TGG | - | chr5.4:15539810-15539829 | None:intergenic | 40.0% | |
| CAATATGGGATACTCGTTGT+AGG | + | chr5.4:15539122-15539141 | MS.gene72649:CDS | 40.0% | |
| CAGATAGGTCCCATATTCTA+TGG | - | chr5.4:15540005-15540024 | None:intergenic | 40.0% | |
| CTAGAAACCAAGGACAAGTA+AGG | + | chr5.4:15540061-15540080 | MS.gene72649:CDS | 40.0% | |
| CTCATGAAGGTTGTATCAAC+CGG | + | chr5.4:15536894-15536913 | MS.gene72649:CDS | 40.0% | |
| GATATTGTTCAAGACACCTC+AGG | + | chr5.4:15536171-15536190 | MS.gene72649:CDS | 40.0% | |
| GCAAACAAATTCTCCTCTGT+AGG | - | chr5.4:15539076-15539095 | None:intergenic | 40.0% | |
| GCAGTAGATACTATCATTCC+AGG | - | chr5.4:15540359-15540378 | None:intergenic | 40.0% | |
| TAGGATCACGAATCAGATTG+TGG | - | chr5.4:15538198-15538217 | None:intergenic | 40.0% | |
| TATGGGACCTATCTGTAGAA+AGG | + | chr5.4:15540010-15540029 | MS.gene72649:CDS | 40.0% | |
| TATGTCCAGTAAAGGGAGTT+TGG | - | chr5.4:15538885-15538904 | None:intergenic | 40.0% | |
| TCATGATCTCAGATCGCTTA+AGG | + | chr5.4:15539360-15539379 | MS.gene72649:CDS | 40.0% | |
| TCCCCATGATGCACATATAT+GGG | - | chr5.4:15536942-15536961 | None:intergenic | 40.0% | |
| TGAAGAGAGTTGTAAGCAGA+AGG | - | chr5.4:15536031-15536050 | None:intergenic | 40.0% | |
| TGTAGTGCTAAACATGCTGT+GGG | - | chr5.4:15538148-15538167 | None:intergenic | 40.0% | |
| TTACGTGAGCTGATTATCAG+AGG | - | chr5.4:15539855-15539874 | None:intergenic | 40.0% | |
| TTACTGTTGCACCCTTTGAT+TGG | - | chr5.4:15536329-15536348 | None:intergenic | 40.0% | |
| TTCCACTCAATGGATGTGAT+CGG | - | chr5.4:15539800-15539819 | None:intergenic | 40.0% | |
| TTCCCAAAGTGAACCCTTTA+TGG | - | chr5.4:15537664-15537683 | None:intergenic | 40.0% | |
| TTGTAGTGCTAAACATGCTG+TGG | - | chr5.4:15538149-15538168 | None:intergenic | 40.0% | |
| ! | CTCTTTTCAGCAAACTGTAC+TGG | + | chr5.4:15537714-15537733 | MS.gene72649:intron | 40.0% |
| ! | GAATGTTGTGATTTTGCCAC+TGG | + | chr5.4:15537750-15537769 | MS.gene72649:intron | 40.0% |
| ! | TAACTAAAGCACCATGGACA+TGG | - | chr5.4:15539410-15539429 | None:intergenic | 40.0% |
| ! | TTTCAGCAAACTGTACTGGT+TGG | + | chr5.4:15537718-15537737 | MS.gene72649:intron | 40.0% |
| !! | AAGATGAAGAAGGTGTTGTC+GGG | + | chr5.4:15536742-15536761 | MS.gene72649:CDS | 40.0% |
| !! | ATATTGGATGGCCTTGTCTT+AGG | + | chr5.4:15536059-15536078 | MS.gene72649:CDS | 40.0% |
| !! | GAAGATGAAGAAGGTGTTGT+CGG | + | chr5.4:15536741-15536760 | MS.gene72649:CDS | 40.0% |
| !! | GGCTCGTTTGGGATTTATTT+TGG | + | chr5.4:15537889-15537908 | MS.gene72649:intron | 40.0% |
| AATAGTTGGCGGGAAGAACT+CGG | - | chr5.4:15539679-15539698 | None:intergenic | 45.0% | |
| ACACAGTGTACTTCATGGCA+GGG | + | chr5.4:15536217-15536236 | MS.gene72649:CDS | 45.0% | |
| ACTACCCGTATGTCCAGTAA+AGG | - | chr5.4:15538893-15538912 | None:intergenic | 45.0% | |
| ACTCCCTTTACTGGACATAC+GGG | + | chr5.4:15538886-15538905 | MS.gene72649:CDS | 45.0% | |
| AGAGTTTGGAAGTGGAACTG+AGG | + | chr5.4:15537867-15537886 | MS.gene72649:intron | 45.0% | |
| AGCCCCATATATGTGCATCA+TGG | + | chr5.4:15536936-15536955 | MS.gene72649:CDS | 45.0% | |
| AGTTCTTCCCCAAGTGCATA+TGG | - | chr5.4:15539614-15539633 | None:intergenic | 45.0% | |
| ATAGTACCAATGCTGCACAC+AGG | - | chr5.4:15537310-15537329 | None:intergenic | 45.0% | |
| ATCCGATCACATCCATTGAG+TGG | + | chr5.4:15539795-15539814 | MS.gene72649:CDS | 45.0% | |
| CACGAATCAGATTGTGGGAT+CGG | - | chr5.4:15538192-15538211 | None:intergenic | 45.0% | |
| CACTTGGGGAAGAACTATCA+TGG | + | chr5.4:15539618-15539637 | MS.gene72649:intron | 45.0% | |
| CCCCATATATGTGCATCATG+GGG | + | chr5.4:15536938-15536957 | MS.gene72649:CDS | 45.0% | |
| CCCCATGATGCACATATATG+GGG | - | chr5.4:15536941-15536960 | None:intergenic | 45.0% | |
| CCTGAACTACATCAACTCCT+TGG | - | chr5.4:15538614-15538633 | None:intergenic | 45.0% | |
| CTACCCGTATGTCCAGTAAA+GGG | - | chr5.4:15538892-15538911 | None:intergenic | 45.0% | |
| CTAGCAGAGACAGAAATGCA+AGG | + | chr5.4:15538585-15538604 | MS.gene72649:CDS | 45.0% | |
| CTCCCCATGATGCACATATA+TGG | - | chr5.4:15536943-15536962 | None:intergenic | 45.0% | |
| GAGTCACCAGTTTCATGGTT+AGG | - | chr5.4:15536681-15536700 | None:intergenic | 45.0% | |
| GAGTTTGGAAGTGGAACTGA+GGG | + | chr5.4:15537868-15537887 | MS.gene72649:intron | 45.0% | |
| GCCAGTAGTTTATTGGCATC+TGG | + | chr5.4:15539313-15539332 | MS.gene72649:CDS | 45.0% | |
| GCCCCATATATGTGCATCAT+GGG | + | chr5.4:15536937-15536956 | MS.gene72649:CDS | 45.0% | |
| GGTCCCATATTCTATGGCAA+AGG | - | chr5.4:15539999-15540018 | None:intergenic | 45.0% | |
| TATGGGATACTCGTTGTAGG+AGG | + | chr5.4:15539125-15539144 | MS.gene72649:CDS | 45.0% | |
| TCCACACACAGTGTACTTCA+TGG | + | chr5.4:15536212-15536231 | MS.gene72649:CDS | 45.0% | |
| TGAAACTGGTGACTCTGCAA+TGG | + | chr5.4:15536686-15536705 | MS.gene72649:CDS | 45.0% | |
| TGACTCTGCAATGGATAGTG+AGG | + | chr5.4:15536695-15536714 | MS.gene72649:CDS | 45.0% | |
| TTCCATGTTGCAGCAGATGT+AGG | - | chr5.4:15538856-15538875 | None:intergenic | 45.0% | |
| TTGCAGAGTCACCAGTTTCA+TGG | - | chr5.4:15536686-15536705 | None:intergenic | 45.0% | |
| ! | ACAGAAATGCAAGGTGTCCA+AGG | + | chr5.4:15538594-15538613 | MS.gene72649:CDS | 45.0% |
| ! | AGGGTTCACTTTGGGAATAG+AGG | + | chr5.4:15537667-15537686 | MS.gene72649:intron | 45.0% |
| ! | GCACATATATGGGGCTTTTG+TGG | - | chr5.4:15536932-15536951 | None:intergenic | 45.0% |
| ! | GGGTTCACTTTGGGAATAGA+GGG | + | chr5.4:15537668-15537687 | MS.gene72649:intron | 45.0% |
| ! | TATATGGGGCTTTTGTGGCA+TGG | - | chr5.4:15536927-15536946 | None:intergenic | 45.0% |
| ! | TGGCATCTGGTAGTGATGAT+GGG | + | chr5.4:15539326-15539345 | MS.gene72649:CDS | 45.0% |
| ! | TTCACTTTGGGAATAGAGGG+AGG | + | chr5.4:15537671-15537690 | MS.gene72649:intron | 45.0% |
| ! | TTGGCATCTGGTAGTGATGA+TGG | + | chr5.4:15539325-15539344 | MS.gene72649:CDS | 45.0% |
| !! | AGATGAAGAAGGTGTTGTCG+GGG | + | chr5.4:15536743-15536762 | MS.gene72649:CDS | 45.0% |
| !! | CCAAGGAGTTGATGTAGTTC+AGG | + | chr5.4:15538611-15538630 | MS.gene72649:CDS | 45.0% |
| !! | GCGAAAGAAGAAGCATTGAC+TGG | - | chr5.4:15539824-15539843 | None:intergenic | 45.0% |
| AAGAAGGTTTCTCAGCCTGG+GGG | - | chr5.4:15536599-15536618 | None:intergenic | 50.0% | |
| AGCCTACATCTGCTGCAACA+TGG | + | chr5.4:15538851-15538870 | MS.gene72649:CDS | 50.0% | |
| CAAGAAGGTTTCTCAGCCTG+GGG | - | chr5.4:15536600-15536619 | None:intergenic | 50.0% | |
| CACACAGTGTACTTCATGGC+AGG | + | chr5.4:15536216-15536235 | MS.gene72649:CDS | 50.0% | |
| CACACTTTAACCGGAAGCTG+TGG | - | chr5.4:15535959-15535978 | None:intergenic | 50.0% | |
| CACAGCTTCCGGTTAAAGTG+TGG | + | chr5.4:15535957-15535976 | MS.gene72649:CDS | 50.0% | |
| CCAAGAAGGTTTCTCAGCCT+GGG | - | chr5.4:15536601-15536620 | None:intergenic | 50.0% | |
| CCAGGTTGCCACACTTTAAC+CGG | - | chr5.4:15535968-15535987 | None:intergenic | 50.0% | |
| CCAGTTTCATGGTTAGGCAC+CGG | - | chr5.4:15536675-15536694 | None:intergenic | 50.0% | |
| CCTATCTGTAGAAAGGGACG+AGG | + | chr5.4:15540017-15540036 | MS.gene72649:CDS | 50.0% | |
| CCTCGTCCCTTTCTACAGAT+AGG | - | chr5.4:15540020-15540039 | None:intergenic | 50.0% | |
| CGTTCAATGAATCCCTGCAG+TGG | + | chr5.4:15539047-15539066 | MS.gene72649:intron | 50.0% | |
| GACTGGAGTCGTCAGAATGA+AGG | + | chr5.4:15538678-15538697 | MS.gene72649:CDS | 50.0% | |
| GAGGAAGTTGCCTGCAAAGT+AGG | - | chr5.4:15536771-15536790 | None:intergenic | 50.0% | |
| GCCATGAAGTACACTGTGTG+TGG | - | chr5.4:15536216-15536235 | None:intergenic | 50.0% | |
| GGTGCCAGTGCAGTTCTTTA+GGG | - | chr5.4:15540328-15540347 | None:intergenic | 50.0% | |
| TAAAGTGTGGCAACCTGGTG+TGG | + | chr5.4:15535970-15535989 | MS.gene72649:CDS | 50.0% | |
| TAGTGAGGACAGTGACAGTG+AGG | + | chr5.4:15536710-15536729 | MS.gene72649:CDS | 50.0% | |
| TCCAAGAAGGTTTCTCAGCC+TGG | - | chr5.4:15536602-15536621 | None:intergenic | 50.0% | |
| TCTGTTCGCACCTACAGTTG+CGG | + | chr5.4:15536864-15536883 | MS.gene72649:intron | 50.0% | |
| TCTTCCAACTTGTCCACACC+AGG | - | chr5.4:15535986-15536005 | None:intergenic | 50.0% | |
| TGTAGAAAGGGACGAGGAAG+AGG | + | chr5.4:15540023-15540042 | MS.gene72649:CDS | 50.0% | |
| TTCTTCAGTGCCACAGCTTC+CGG | + | chr5.4:15535946-15535965 | MS.gene72649:CDS | 50.0% | |
| TTGCGGAGGGTAACTCATGA+AGG | + | chr5.4:15536881-15536900 | MS.gene72649:CDS | 50.0% | |
| TTTGTGGCATGGAGCGTATC+CGG | - | chr5.4:15536916-15536935 | None:intergenic | 50.0% | |
| ! | CTAAAGCACCATGGACATGG+CGG | - | chr5.4:15539407-15539426 | None:intergenic | 50.0% |
| !! | GATGAAGAAGGTGTTGTCGG+GGG | + | chr5.4:15536744-15536763 | MS.gene72649:CDS | 50.0% |
| AGAAAGGGACGAGGAAGAGG+AGG | + | chr5.4:15540026-15540045 | MS.gene72649:CDS | 55.0% | |
| AGAAGGTTTCTCAGCCTGGG+GGG | - | chr5.4:15536598-15536617 | None:intergenic | 55.0% | |
| AGTGGAACTGAGGGCTCGTT+TGG | + | chr5.4:15537877-15537896 | MS.gene72649:intron | 55.0% | |
| AGTTGGGGAGGCAGATCTTC+AGG | - | chr5.4:15540090-15540109 | None:intergenic | 55.0% | |
| CACTGGCACCCAAAGATTCC+TGG | + | chr5.4:15540338-15540357 | MS.gene72649:CDS | 55.0% | |
| CAGGAGCCCTTACTTGTCCT+TGG | - | chr5.4:15540071-15540090 | None:intergenic | 55.0% | |
| CCCAGGCTGAGAAACCTTCT+TGG | + | chr5.4:15536598-15536617 | MS.gene72649:intron | 55.0% | |
| CCGGTGCCTAACCATGAAAC+TGG | + | chr5.4:15536672-15536691 | MS.gene72649:CDS | 55.0% | |
| CCGGTTAAAGTGTGGCAACC+TGG | + | chr5.4:15535965-15535984 | MS.gene72649:CDS | 55.0% | |
| CGCTTCGTTTCTTCGAGTCC+CGG | - | chr5.4:15535919-15535938 | None:intergenic | 55.0% | |
| GAGTTACCCTCCGCAACTGT+AGG | - | chr5.4:15536877-15536896 | None:intergenic | 55.0% | |
| GCAACCTGGTGTGGACAAGT+TGG | + | chr5.4:15535979-15535998 | MS.gene72649:CDS | 55.0% | |
| GGGTGCCAGTGCAGTTCTTT+AGG | - | chr5.4:15540329-15540348 | None:intergenic | 55.0% | |
| GTACTTCATGGCAGGGACAC+AGG | + | chr5.4:15536224-15536243 | MS.gene72649:CDS | 55.0% | |
| GTGGAACTGAGGGCTCGTTT+GGG | + | chr5.4:15537878-15537897 | MS.gene72649:intron | 55.0% | |
| GTGTGACCTGTGTGCAGCAT+TGG | + | chr5.4:15537301-15537320 | MS.gene72649:intron | 55.0% | |
| TGTGCATCATGGGGAGACTC+TGG | + | chr5.4:15536947-15536966 | MS.gene72649:CDS | 55.0% | |
| TTCGCACCTACAGTTGCGGA+GGG | + | chr5.4:15536868-15536887 | MS.gene72649:intron | 55.0% | |
| TTTCCCTTCCGCCATGTCCA+TGG | + | chr5.4:15539396-15539415 | MS.gene72649:intron | 55.0% | |
| ! | TTCTGGGAAGACACGTGAGC+CGG | + | chr5.4:15536653-15536672 | MS.gene72649:CDS | 55.0% |
| CTCTGTAGGGCTCCACTGCA+GGG | - | chr5.4:15539062-15539081 | None:intergenic | 60.0% | |
| GGGAGACTCTGGTCATGTGC+AGG | + | chr5.4:15536958-15536977 | MS.gene72649:CDS | 60.0% | |
| GTTCGCACCTACAGTTGCGG+AGG | + | chr5.4:15536867-15536886 | MS.gene72649:intron | 60.0% | |
| TGATGTTGCATGTGCCCCCC+AGG | + | chr5.4:15536581-15536600 | MS.gene72649:intron | 60.0% | |
| TGTCGGGGGTCCTACTTTGC+AGG | + | chr5.4:15536758-15536777 | MS.gene72649:CDS | 60.0% | |
| ! | AGCACCATGGACATGGCGGA+AGG | - | chr5.4:15539403-15539422 | None:intergenic | 60.0% |
| ! | GCACCATGGACATGGCGGAA+GGG | - | chr5.4:15539402-15539421 | None:intergenic | 60.0% |
| CCTCTGTAGGGCTCCACTGC+AGG | - | chr5.4:15539063-15539082 | None:intergenic | 65.0% | |
| CCTGCAGTGGAGCCCTACAG+AGG | + | chr5.4:15539060-15539079 | MS.gene72649:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 15535788 | 15540418 | 15535788 | ID=MS.gene72649 |
| chr5.4 | mRNA | 15535788 | 15540418 | 15535788 | ID=MS.gene72649.t1;Parent=MS.gene72649 |
| chr5.4 | exon | 15535788 | 15535826 | 15535788 | ID=MS.gene72649.t1.exon1;Parent=MS.gene72649.t1 |
| chr5.4 | CDS | 15535788 | 15535826 | 15535788 | ID=cds.MS.gene72649.t1;Parent=MS.gene72649.t1 |
| chr5.4 | exon | 15535929 | 15536080 | 15535929 | ID=MS.gene72649.t1.exon2;Parent=MS.gene72649.t1 |
| chr5.4 | CDS | 15535929 | 15536080 | 15535929 | ID=cds.MS.gene72649.t1;Parent=MS.gene72649.t1 |
| chr5.4 | exon | 15536167 | 15536245 | 15536167 | ID=MS.gene72649.t1.exon3;Parent=MS.gene72649.t1 |
| chr5.4 | CDS | 15536167 | 15536245 | 15536167 | ID=cds.MS.gene72649.t1;Parent=MS.gene72649.t1 |
| chr5.4 | exon | 15536603 | 15536779 | 15536603 | ID=MS.gene72649.t1.exon4;Parent=MS.gene72649.t1 |
| chr5.4 | CDS | 15536603 | 15536779 | 15536603 | ID=cds.MS.gene72649.t1;Parent=MS.gene72649.t1 |
| chr5.4 | exon | 15536881 | 15536979 | 15536881 | ID=MS.gene72649.t1.exon5;Parent=MS.gene72649.t1 |
| chr5.4 | CDS | 15536881 | 15536979 | 15536881 | ID=cds.MS.gene72649.t1;Parent=MS.gene72649.t1 |
| chr5.4 | exon | 15538555 | 15538714 | 15538555 | ID=MS.gene72649.t1.exon6;Parent=MS.gene72649.t1 |
| chr5.4 | CDS | 15538555 | 15538714 | 15538555 | ID=cds.MS.gene72649.t1;Parent=MS.gene72649.t1 |
| chr5.4 | exon | 15538821 | 15538927 | 15538821 | ID=MS.gene72649.t1.exon7;Parent=MS.gene72649.t1 |
| chr5.4 | CDS | 15538821 | 15538927 | 15538821 | ID=cds.MS.gene72649.t1;Parent=MS.gene72649.t1 |
| chr5.4 | exon | 15539067 | 15539206 | 15539067 | ID=MS.gene72649.t1.exon8;Parent=MS.gene72649.t1 |
| chr5.4 | CDS | 15539067 | 15539206 | 15539067 | ID=cds.MS.gene72649.t1;Parent=MS.gene72649.t1 |
| chr5.4 | exon | 15539294 | 15539381 | 15539294 | ID=MS.gene72649.t1.exon9;Parent=MS.gene72649.t1 |
| chr5.4 | CDS | 15539294 | 15539381 | 15539294 | ID=cds.MS.gene72649.t1;Parent=MS.gene72649.t1 |
| chr5.4 | exon | 15539752 | 15539870 | 15539752 | ID=MS.gene72649.t1.exon10;Parent=MS.gene72649.t1 |
| chr5.4 | CDS | 15539752 | 15539870 | 15539752 | ID=cds.MS.gene72649.t1;Parent=MS.gene72649.t1 |
| chr5.4 | exon | 15540008 | 15540125 | 15540008 | ID=MS.gene72649.t1.exon11;Parent=MS.gene72649.t1 |
| chr5.4 | CDS | 15540008 | 15540125 | 15540008 | ID=cds.MS.gene72649.t1;Parent=MS.gene72649.t1 |
| chr5.4 | exon | 15540314 | 15540418 | 15540314 | ID=MS.gene72649.t1.exon12;Parent=MS.gene72649.t1 |
| chr5.4 | CDS | 15540314 | 15540418 | 15540314 | ID=cds.MS.gene72649.t1;Parent=MS.gene72649.t1 |
| Gene Sequence |
| Protein sequence |
