Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72990.t1 | XP_013457678.1 | 97.4 | 581 | 14 | 1 | 1 | 581 | 1 | 580 | 1.30E-282 | 981.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72990.t1 | F4JPR7 | 51.0 | 606 | 230 | 18 | 1 | 581 | 1 | 564 | 3.3e-109 | 397.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72990.t1 | A0A072UPD8 | 97.4 | 581 | 14 | 1 | 1 | 581 | 1 | 580 | 9.5e-283 | 981.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051744 | MS.gene72990 | 0.800934 | 1.14E-48 | -1.69E-46 |
| MS.gene053006 | MS.gene72990 | 0.850474 | 1.66E-60 | -1.69E-46 |
| MS.gene05365 | MS.gene72990 | 0.802073 | 6.67E-49 | -1.69E-46 |
| MS.gene056162 | MS.gene72990 | 0.827716 | 1.34E-54 | -1.69E-46 |
| MS.gene056174 | MS.gene72990 | 0.828883 | 7.02E-55 | -1.69E-46 |
| MS.gene05686 | MS.gene72990 | 0.813856 | 2.07E-51 | -1.69E-46 |
| MS.gene058783 | MS.gene72990 | 0.812507 | 4.09E-51 | -1.69E-46 |
| MS.gene05897 | MS.gene72990 | 0.801055 | 1.08E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72990.t1 | MTR_4g102810 | 97.935 | 581 | 11 | 1 | 1 | 581 | 1 | 580 | 0.0 | 1139 |
| MS.gene72990.t1 | MTR_8g432670 | 41.743 | 218 | 121 | 3 | 365 | 581 | 288 | 500 | 7.41e-45 | 166 |
| MS.gene72990.t1 | MTR_8g432670 | 34.602 | 289 | 135 | 15 | 1 | 267 | 1 | 257 | 7.14e-22 | 99.8 |
| MS.gene72990.t1 | MTR_4g105430 | 31.138 | 167 | 101 | 4 | 425 | 579 | 206 | 370 | 8.48e-14 | 73.6 |
| MS.gene72990.t1 | MTR_1g077740 | 31.746 | 189 | 88 | 5 | 422 | 580 | 288 | 465 | 2.23e-11 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72990.t1 | AT4G11740 | 50.413 | 605 | 235 | 18 | 1 | 581 | 1 | 564 | 4.55e-139 | 416 |
| MS.gene72990.t1 | AT4G23040 | 46.000 | 600 | 230 | 18 | 1 | 581 | 1 | 525 | 2.29e-122 | 371 |
| MS.gene72990.t1 | AT4G11740 | 46.746 | 507 | 203 | 19 | 1 | 482 | 1 | 465 | 6.52e-91 | 288 |
| MS.gene72990.t1 | AT4G00752 | 55.856 | 111 | 42 | 1 | 471 | 581 | 365 | 468 | 1.23e-32 | 131 |
| MS.gene72990.t1 | AT4G00752 | 28.606 | 409 | 206 | 13 | 1 | 388 | 1 | 344 | 3.61e-26 | 112 |
| MS.gene72990.t1 | AT4G10790 | 31.953 | 169 | 86 | 5 | 431 | 580 | 321 | 479 | 7.11e-13 | 71.6 |
Find 160 sgRNAs with CRISPR-Local
Find 280 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAACAAAGCTTCTTGCTTAT+TGG | 0.125120 | 8.3:-19012861 | None:intergenic |
| TGCGGAGGACTGCTGCTTTC+CGG | 0.215239 | 8.3:-19011651 | None:intergenic |
| CCTGGAGCTTATGAGATCTT+AGG | 0.219787 | 8.3:-19012509 | None:intergenic |
| GTAGGATCAATAAGAGAAAA+TGG | 0.285471 | 8.3:-19010483 | None:intergenic |
| CGCCCACGACGGCTGCCATC+TGG | 0.310057 | 8.3:-19012480 | None:intergenic |
| CCAATAGTTGAAGATGTTAC+TGG | 0.310930 | 8.3:+19010642 | MS.gene72990:CDS |
| CCAGTAACATCTTCAACTAT+TGG | 0.316434 | 8.3:-19010642 | None:intergenic |
| TCTCTTATTGATCCTACAAT+TGG | 0.317933 | 8.3:+19010489 | MS.gene72990:CDS |
| TCTATGTCATTGCTGCTATC+TGG | 0.323869 | 8.3:-19010810 | None:intergenic |
| GTGCAGGACGTGAGTGAATC+TGG | 0.324522 | 8.3:+19010993 | MS.gene72990:intron |
| TGCAGTTTCATTGTCCTTGA+AGG | 0.340122 | 8.3:+19011061 | MS.gene72990:CDS |
| CGGCGATAACCACTTCCTTC+AGG | 0.342623 | 8.3:-19011873 | None:intergenic |
| GGAATTTGCCTTACCTCTCT+TGG | 0.348395 | 8.3:-19010570 | None:intergenic |
| ACATGAGTTCATGCAGAATA+GGG | 0.354183 | 8.3:+19011908 | MS.gene72990:CDS |
| ATGACACTCCCATGTATATC+TGG | 0.359077 | 8.3:-19010684 | None:intergenic |
| AGTATACTTCTCCCAATTGT+AGG | 0.369406 | 8.3:-19010501 | None:intergenic |
| CCCATGTATATCTGGACCTT+GGG | 0.371893 | 8.3:-19010676 | None:intergenic |
| GTGTCAATTGTCTCTTGATT+AGG | 0.374402 | 8.3:-19009108 | None:intergenic |
| CATCTTCAACTATTGGAATA+TGG | 0.374805 | 8.3:-19010635 | None:intergenic |
| ACCTACGGCAGGGCCATCTA+AGG | 0.375130 | 8.3:+19011293 | MS.gene72990:CDS |
| TTATGGTCATTGTAGATTGC+AGG | 0.383976 | 8.3:+19011479 | MS.gene72990:intron |
| AGAATCTCAAAGAAAGTTGC+AGG | 0.386414 | 8.3:+19012204 | MS.gene72990:CDS |
| CACATGAGTTCATGCAGAAT+AGG | 0.393615 | 8.3:+19011907 | MS.gene72990:CDS |
| TCAACTCCTTGTGCCTTAGA+TGG | 0.396351 | 8.3:-19011306 | None:intergenic |
| TGTTGTGCCTGCCAGTGTGC+TGG | 0.398181 | 8.3:-19011625 | None:intergenic |
| AAAAGTGATTGCCTTGGGTT+AGG | 0.405676 | 8.3:-19011017 | None:intergenic |
| TCGCCCTCCTTCACCATCAT+TGG | 0.408632 | 8.3:+19011962 | MS.gene72990:CDS |
| CCAAAGGCACGCCTAGGATA+TGG | 0.415543 | 8.3:-19012797 | None:intergenic |
| CTCTCGTCTGGATGCCTCAA+TGG | 0.415695 | 8.3:-19010853 | None:intergenic |
| CGTTCCCCAAGGAGATTTCA+TGG | 0.423137 | 8.3:+19010392 | MS.gene72990:CDS |
| TCATCATCAGAGGATGGTTC+TGG | 0.423795 | 8.3:-19012429 | None:intergenic |
| TATATCCATGAAATCTCCTT+GGG | 0.423971 | 8.3:-19010397 | None:intergenic |
| CTCTTATTGATCCTACAATT+GGG | 0.431169 | 8.3:+19010490 | MS.gene72990:CDS |
| TGGAGGCTCAGCGCTTGATA+AGG | 0.432269 | 8.3:+19011982 | MS.gene72990:CDS |
| AGGCACAAGGAGTTGACTTA+GGG | 0.441612 | 8.3:+19011313 | MS.gene72990:CDS |
| GGCGATAACCACTTCCTTCA+GGG | 0.446949 | 8.3:-19011872 | None:intergenic |
| TAGAGGAGATGCCTTTGGTT+AGG | 0.447607 | 8.3:+19011535 | MS.gene72990:CDS |
| AACTTAAAGGTGTACCTTCA+AGG | 0.447852 | 8.3:-19011075 | None:intergenic |
| CTCACCAGTCTGTAACTGCT+TGG | 0.449344 | 8.3:-19012662 | None:intergenic |
| AGATGCCTTTGGTTAGGAAC+AGG | 0.451031 | 8.3:+19011541 | MS.gene72990:CDS |
| CCTCTAAAAGTGATTGCCTT+GGG | 0.451247 | 8.3:-19011022 | None:intergenic |
| CCATATCCTAGGCGTGCCTT+TGG | 0.452267 | 8.3:+19012797 | MS.gene72990:CDS |
| TGGTGGTAGAGAGACTTCTT+TGG | 0.454142 | 8.3:-19012409 | None:intergenic |
| CCCTCCTTCACCATCATTGG+AGG | 0.457447 | 8.3:+19011965 | MS.gene72990:CDS |
| CGAAGGAGACAGAAATTTGA+TGG | 0.458140 | 8.3:+19010213 | MS.gene72990:CDS |
| GATGAGTGACAAACGGCGCC+TGG | 0.460210 | 8.3:-19010548 | None:intergenic |
| GGAGGCTCAGCGCTTGATAA+GGG | 0.466359 | 8.3:+19011983 | MS.gene72990:CDS |
| AAGAAAGTTGCAGGAAGAGC+AGG | 0.467946 | 8.3:+19012213 | MS.gene72990:CDS |
| GCAAATTCCGATAGAGGATA+AGG | 0.469648 | 8.3:+19010584 | MS.gene72990:CDS |
| GCGCTTGATAAGGGAACAAC+AGG | 0.471422 | 8.3:+19011992 | MS.gene72990:CDS |
| CTATATCCATGAAATCTCCT+TGG | 0.473947 | 8.3:-19010398 | None:intergenic |
| TCACTTAGCTCCACAGGGTC+AGG | 0.475192 | 8.3:+19011579 | MS.gene72990:CDS |
| CTTCATAGATATTGGTAGAC+AGG | 0.477272 | 8.3:+19012634 | MS.gene72990:CDS |
| ATGCTTGAGGCTGCAATGTT+CGG | 0.477862 | 8.3:+19011843 | MS.gene72990:CDS |
| GATGCTGGAGCACCTACGGC+AGG | 0.478392 | 8.3:+19011282 | MS.gene72990:CDS |
| AAGGCACAAGGAGTTGACTT+AGG | 0.479452 | 8.3:+19011312 | MS.gene72990:CDS |
| AGATGTAGAGGAGATGCCTT+TGG | 0.483061 | 8.3:+19011530 | MS.gene72990:CDS |
| GGGCGATATGCAAGAGGTGC+AGG | 0.483791 | 8.3:-19011945 | None:intergenic |
| GGTAAGGCAAATTCCGATAG+AGG | 0.489342 | 8.3:+19010578 | MS.gene72990:CDS |
| AATTGCACTGCAAAAGCTTC+AGG | 0.492758 | 8.3:+19009161 | MS.gene72990:CDS |
| CATGTGTCACTTAGCTCCAC+AGG | 0.497077 | 8.3:+19011573 | MS.gene72990:CDS |
| TTTCATGGCAGGAGCATGGT+GGG | 0.497625 | 8.3:+19010158 | MS.gene72990:intron |
| TTAGGGGAAGTATCTTCAAA+TGG | 0.499966 | 8.3:+19011330 | MS.gene72990:CDS |
| ACTGGCAGGCACAACAGTTC+CGG | 0.502879 | 8.3:+19011632 | MS.gene72990:CDS |
| CTACCATCCTTATCCTCTAT+CGG | 0.505961 | 8.3:-19010591 | None:intergenic |
| TCCCATGTATATCTGGACCT+TGG | 0.507661 | 8.3:-19010677 | None:intergenic |
| TTCTCCAATGTGGGAGCACT+AGG | 0.508488 | 8.3:-19010783 | None:intergenic |
| TCCTCTAAAAGTGATTGCCT+TGG | 0.509045 | 8.3:-19011023 | None:intergenic |
| GGTGAAGAATTAGTCGGAGC+AGG | 0.510649 | 8.3:-19010744 | None:intergenic |
| TGAAGAAGATGAAGATGTAG+AGG | 0.512456 | 8.3:+19011518 | MS.gene72990:CDS |
| ATGCCAGATGGCAGCCGTCG+TGG | 0.515721 | 8.3:+19012477 | MS.gene72990:CDS |
| CAAGAGGTGCAGGCTGAGGA+TGG | 0.523670 | 8.3:-19011935 | None:intergenic |
| CTAGGTCTCGCACTACTGTC+AGG | 0.525591 | 8.3:-19010765 | None:intergenic |
| TAGGCGTGCCTTTGGTGTTG+AGG | 0.525926 | 8.3:+19012805 | MS.gene72990:CDS |
| AATTACAGCAATCATGAACT+TGG | 0.527871 | 8.3:+19010885 | MS.gene72990:CDS |
| GACACATTCATCAGCATCAC+CGG | 0.531398 | 8.3:+19009126 | MS.gene72990:CDS |
| GCTTATGAGATCTTAGGAAT+CGG | 0.531602 | 8.3:-19012503 | None:intergenic |
| TGCCAGATGGCAGCCGTCGT+GGG | 0.532912 | 8.3:+19012478 | MS.gene72990:CDS |
| CCTAAGATCTCATAAGCTCC+AGG | 0.534553 | 8.3:+19012509 | MS.gene72990:CDS |
| AGCATCTTTGCCTGACCCTG+TGG | 0.535288 | 8.3:-19011589 | None:intergenic |
| GGCATCCAGACGAGAGGCTG+AGG | 0.536461 | 8.3:+19010860 | MS.gene72990:CDS |
| AAGGACTATACTTCATCAGA+TGG | 0.537129 | 8.3:-19011690 | None:intergenic |
| CGTGTACAAGAAGGTGATGC+TGG | 0.537918 | 8.3:+19011267 | MS.gene72990:CDS |
| CTTGCAAAAGATAAAAGAGA+TGG | 0.538424 | 8.3:-19010450 | None:intergenic |
| TGAGGAAAGTGCTGTGACAT+TGG | 0.539969 | 8.3:+19012823 | MS.gene72990:CDS |
| GAGACAGAAATTTGATGGCC+AGG | 0.541997 | 8.3:+19010218 | MS.gene72990:CDS |
| ATCGAGTCCAGCACACTGGC+AGG | 0.544729 | 8.3:+19011618 | MS.gene72990:CDS |
| AAGCGCTGAGCCTCCAATGA+TGG | 0.546680 | 8.3:-19011975 | None:intergenic |
| CATGAAATCTCCTTGGGGAA+CGG | 0.548281 | 8.3:-19010391 | None:intergenic |
| GAAACTGCATGAGCAAGCTC+AGG | 0.552949 | 8.3:-19011047 | None:intergenic |
| GCTGTGACATTGGACGAACT+TGG | 0.558529 | 8.3:+19012833 | MS.gene72990:CDS |
| TATGCAAGAGGTGCAGGCTG+AGG | 0.558798 | 8.3:-19011939 | None:intergenic |
| AGGTGATGCTGGAGCACCTA+CGG | 0.559902 | 8.3:+19011278 | MS.gene72990:CDS |
| CTATACTTCATCAGATGGGA+AGG | 0.562623 | 8.3:-19011685 | None:intergenic |
| TCTCTTGGATGAGTGACAAA+CGG | 0.564540 | 8.3:-19010555 | None:intergenic |
| GGTGGAATCCCTGAAGGAAG+TGG | 0.569156 | 8.3:+19011864 | MS.gene72990:CDS |
| GCCTCCAATGATGGTGAAGG+AGG | 0.570350 | 8.3:-19011966 | None:intergenic |
| AATGATTCGCGCAGCCATTG+AGG | 0.571010 | 8.3:+19010839 | MS.gene72990:CDS |
| CTCTTGATTAGGTGTCGCCA+TGG | 0.571254 | 8.3:-19009097 | None:intergenic |
| AGCTCTGCCGCCGTTCCCCA+AGG | 0.572207 | 8.3:+19010381 | MS.gene72990:intron |
| TTTCAATATTTACAGTGGGG+TGG | 0.572452 | 8.3:+19011789 | MS.gene72990:intron |
| ATCTGGTAAATTCTCCAATG+TGG | 0.573046 | 8.3:-19010793 | None:intergenic |
| GTTAATGCATATTTCAGCGA+AGG | 0.573755 | 8.3:+19010196 | MS.gene72990:CDS |
| GCCTTAGATGGCCCTGCCGT+AGG | 0.575405 | 8.3:-19011294 | None:intergenic |
| GCCCAAGGTCCAGATATACA+TGG | 0.578375 | 8.3:+19010675 | MS.gene72990:CDS |
| CAAACCAAGCAGTTACAGAC+TGG | 0.578668 | 8.3:+19012658 | MS.gene72990:CDS |
| AGTCAATCAACTCCTCAAGC+TGG | 0.583922 | 8.3:+19010612 | MS.gene72990:CDS |
| GGGAAGTATCTTCAAATGGA+AGG | 0.585921 | 8.3:+19011334 | MS.gene72990:CDS |
| TGCAGGACGTGAGTGAATCT+GGG | 0.588133 | 8.3:+19010994 | MS.gene72990:intron |
| GTGGGGTGGCATGTCTTCAG+TGG | 0.588272 | 8.3:+19011803 | MS.gene72990:intron |
| CATGAGTTCATGCAGAATAG+GGG | 0.589737 | 8.3:+19011909 | MS.gene72990:CDS |
| TCACTCATCCAAGAGAGGTA+AGG | 0.590566 | 8.3:+19010562 | MS.gene72990:CDS |
| GGTCATTGTAGATTGCAGGC+AGG | 0.594885 | 8.3:+19011483 | MS.gene72990:intron |
| AGTAGCCTCAGCTTCCGCAA+TGG | 0.595688 | 8.3:-19012155 | None:intergenic |
| AGTATACTTGATACTCATCT+CGG | 0.596253 | 8.3:+19010516 | MS.gene72990:CDS |
| TCATCTCGGTGCAACAAACC+AGG | 0.596500 | 8.3:+19010530 | MS.gene72990:CDS |
| ACTGGAACTGTTCATGCCCA+AGG | 0.596583 | 8.3:+19010660 | MS.gene72990:CDS |
| TGCAATTGGTTGAGAAACAC+CGG | 0.598757 | 8.3:-19009145 | None:intergenic |
| CACAGCACTGTCATCATCAG+AGG | 0.600630 | 8.3:-19012439 | None:intergenic |
| TCTGGTAAATTCTCCAATGT+GGG | 0.601343 | 8.3:-19010792 | None:intergenic |
| GCAAAAGATAAAAGAGATGG+AGG | 0.602367 | 8.3:-19010447 | None:intergenic |
| TCAACACCAAAGGCACGCCT+AGG | 0.602812 | 8.3:-19012803 | None:intergenic |
| ACTCATGTGGTGCATAAGCA+CGG | 0.608070 | 8.3:-19011893 | None:intergenic |
| TGTCTGCTTCTAATGATGCA+AGG | 0.612016 | 8.3:-19012114 | None:intergenic |
| AAAGCACGGCGTGTACAAGA+AGG | 0.613259 | 8.3:+19011258 | MS.gene72990:CDS |
| ATGTTCGGTGGAATCCCTGA+AGG | 0.614066 | 8.3:+19011858 | MS.gene72990:CDS |
| TGAGCCTCCAATGATGGTGA+AGG | 0.617026 | 8.3:-19011969 | None:intergenic |
| GAAGGCCATTGCGGAAGCTG+AGG | 0.620071 | 8.3:+19012150 | MS.gene72990:CDS |
| CTTGAGGCTGCAATGTTCGG+TGG | 0.621722 | 8.3:+19011846 | MS.gene72990:CDS |
| GAAATCTCCTTGGGGAACGG+CGG | 0.621741 | 8.3:-19010388 | None:intergenic |
| ATGCTGGAGCACCTACGGCA+GGG | 0.622987 | 8.3:+19011283 | MS.gene72990:CDS |
| ATTGGAATATGGCCAGCTTG+AGG | 0.623410 | 8.3:-19010624 | None:intergenic |
| GTAGACCTGTTCCTAACCAA+AGG | 0.623848 | 8.3:-19011546 | None:intergenic |
| TTAGGAATCGGCGCCCACGA+CGG | 0.625136 | 8.3:-19012491 | None:intergenic |
| GGCAGGTAAGACCATATCCT+AGG | 0.626242 | 8.3:+19012786 | MS.gene72990:intron |
| AGCACTTTCCTCAACACCAA+AGG | 0.630829 | 8.3:-19012813 | None:intergenic |
| AAAAGAATTGAAGGCCATTG+CGG | 0.632012 | 8.3:+19012141 | MS.gene72990:CDS |
| GTGAATCTGGGCCTAACCCA+AGG | 0.632081 | 8.3:+19011006 | MS.gene72990:CDS |
| CCTCCAATGATGGTGAAGGA+GGG | 0.632230 | 8.3:-19011965 | None:intergenic |
| CTGTCAGGTGAAGAATTAGT+CGG | 0.632592 | 8.3:-19010750 | None:intergenic |
| AGGACTATACTTCATCAGAT+GGG | 0.635714 | 8.3:-19011689 | None:intergenic |
| ATTAATCGAGTCCAGCACAC+TGG | 0.635866 | 8.3:+19011614 | MS.gene72990:CDS |
| AGCTGAGGCTACTCGCGAAG+AGG | 0.636391 | 8.3:+19012165 | MS.gene72990:CDS |
| CCCAAGGTCCAGATATACAT+GGG | 0.639087 | 8.3:+19010676 | MS.gene72990:CDS |
| GCACTGTCATCATCAGAGGA+TGG | 0.645765 | 8.3:-19012435 | None:intergenic |
| TCATCAGAGGATGGTTCTGG+TGG | 0.646164 | 8.3:-19012426 | None:intergenic |
| GGGAAGGAATTGTCATTATG+CGG | 0.648088 | 8.3:-19011669 | None:intergenic |
| GAGACCTAGTGCTCCCACAT+TGG | 0.648732 | 8.3:+19010779 | MS.gene72990:CDS |
| GAAGGAGGGCGATATGCAAG+AGG | 0.652068 | 8.3:-19011951 | None:intergenic |
| GGCACAAGGAGTTGACTTAG+GGG | 0.652626 | 8.3:+19011314 | MS.gene72990:CDS |
| CTATTCTGCATGAACTCATG+TGG | 0.657273 | 8.3:-19011906 | None:intergenic |
| ATTCCGATAGAGGATAAGGA+TGG | 0.664553 | 8.3:+19010588 | MS.gene72990:CDS |
| AAGGAATTGTCATTATGCGG+AGG | 0.670479 | 8.3:-19011666 | None:intergenic |
| CATTGAGGCATCCAGACGAG+AGG | 0.670635 | 8.3:+19010854 | MS.gene72990:CDS |
| GCAGGGCCATCTAAGGCACA+AGG | 0.682738 | 8.3:+19011300 | MS.gene72990:CDS |
| TGACAGTGCTGTGAATCTGA+TGG | 0.684961 | 8.3:+19012449 | MS.gene72990:CDS |
| GTTTGTCACTCATCCAAGAG+AGG | 0.689319 | 8.3:+19010557 | MS.gene72990:CDS |
| ATGTGTCACTTAGCTCCACA+GGG | 0.692890 | 8.3:+19011574 | MS.gene72990:CDS |
| ATATCCATGAAATCTCCTTG+GGG | 0.695995 | 8.3:-19010396 | None:intergenic |
| TGATGAAGCAGTAATGCTTG+AGG | 0.722177 | 8.3:+19011830 | MS.gene72990:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAGATAATTTAAAAACA+AGG | - | chr8.3:19009657-19009676 | None:intergenic | 10.0% |
| !! | TTAAATTTATTAAAATGTCT+TGG | + | chr8.3:19009447-19009466 | MS.gene72990:intron | 10.0% |
| !!! | TGACTTTATTTTTTTTATAT+TGG | + | chr8.3:19011178-19011197 | MS.gene72990:intron | 10.0% |
| !!! | TTTTTTTTATATTGGAAATT+TGG | + | chr8.3:19011186-19011205 | MS.gene72990:intron | 10.0% |
| !! | AAAAAATAAAGTCAAAGTTA+CGG | - | chr8.3:19011172-19011191 | None:intergenic | 15.0% |
| !! | AATACAACATATAAAATTAG+AGG | - | chr8.3:19010954-19010973 | None:intergenic | 15.0% |
| !!! | AATTTTAAGATAAGAATGAT+AGG | - | chr8.3:19012704-19012723 | None:intergenic | 15.0% |
| !!! | TAATTTTCAATATTTACAGT+GGG | + | chr8.3:19011785-19011804 | MS.gene72990:intron | 15.0% |
| !!! | TATTTCTTAATTGTTTTTTC+CGG | + | chr8.3:19010925-19010944 | MS.gene72990:intron | 15.0% |
| !!! | TTTGTAAACATTTTTTTTCA+TGG | + | chr8.3:19010143-19010162 | MS.gene72990:intron | 15.0% |
| !! | AACAAAAAAACAATGATGAA+TGG | - | chr8.3:19010338-19010357 | None:intergenic | 20.0% |
| !! | ATAGAATAAGTTCTCTTTAA+TGG | + | chr8.3:19010089-19010108 | MS.gene72990:intron | 20.0% |
| !! | CACTGTAAATATTGAAAATT+AGG | - | chr8.3:19011786-19011805 | None:intergenic | 20.0% |
| !! | GGAAAAAACAATTAAGAAAT+AGG | - | chr8.3:19010926-19010945 | None:intergenic | 20.0% |
| !! | TATGGTTTATCTAATCAATA+GGG | + | chr8.3:19009276-19009295 | MS.gene72990:intron | 20.0% |
| !! | TCAACAATATAAGAAACTAA+TGG | - | chr8.3:19009930-19009949 | None:intergenic | 20.0% |
| !! | TTATGGTTTATCTAATCAAT+AGG | + | chr8.3:19009275-19009294 | MS.gene72990:intron | 20.0% |
| !! | TTCATTGCAATTAGTTATAT+TGG | + | chr8.3:19012269-19012288 | MS.gene72990:intron | 20.0% |
| !!! | AATTTTCAATATTTACAGTG+GGG | + | chr8.3:19011786-19011805 | MS.gene72990:intron | 20.0% |
| !!! | ACAAATTGTTATTACTCTTT+AGG | + | chr8.3:19009212-19009231 | MS.gene72990:intron | 20.0% |
| !!! | ATTTCTTAATTGTTTTTTCC+GGG | + | chr8.3:19010926-19010945 | MS.gene72990:intron | 20.0% |
| !!! | CATCATTTTTCTGAATAATT+AGG | - | chr8.3:19012732-19012751 | None:intergenic | 20.0% |
| !!! | CATTGTTTTTTTGTTATTGA+TGG | + | chr8.3:19010343-19010362 | MS.gene72990:intron | 20.0% |
| !!! | CTAATTTTCAATATTTACAG+TGG | + | chr8.3:19011784-19011803 | MS.gene72990:intron | 20.0% |
| !!! | TTTTTTTGTTTTGTTTCTGT+TGG | + | chr8.3:19012753-19012772 | MS.gene72990:intron | 20.0% |
| ! | AAAAATGTTTACAAATGCAG+AGG | - | chr8.3:19010138-19010157 | None:intergenic | 25.0% |
| ! | AACAAAGCAAGATTAAATCT+AGG | - | chr8.3:19009613-19009632 | None:intergenic | 25.0% |
| ! | AATAAGAGAACACAACTTAA+AGG | - | chr8.3:19011091-19011110 | None:intergenic | 25.0% |
| ! | CTTACATAGGTTAAAGTTAT+AGG | + | chr8.3:19012027-19012046 | MS.gene72990:intron | 25.0% |
| ! | TAGAAATCAAATTCCCATTT+CGG | + | chr8.3:19012330-19012349 | MS.gene72990:intron | 25.0% |
| ! | TATAATCAGTTCTATGATGT+TGG | + | chr8.3:19009499-19009518 | MS.gene72990:intron | 25.0% |
| ! | TATGAGAAGGTAAACAATAT+CGG | - | chr8.3:19010059-19010078 | None:intergenic | 25.0% |
| ! | TCTGAAAATTCATAAAGTGA+AGG | - | chr8.3:19011712-19011731 | None:intergenic | 25.0% |
| ! | TGTAATCAGAAAAGTGAATA+AGG | - | chr8.3:19009195-19009214 | None:intergenic | 25.0% |
| !! | AAAAGAGACTGAAAATTTTC+AGG | - | chr8.3:19012611-19012630 | None:intergenic | 25.0% |
| !! | ACTTTATGAATTTTCAGAAC+GGG | + | chr8.3:19011714-19011733 | MS.gene72990:intron | 25.0% |
| !! | AGCGATTGAATTTTCAATTA+TGG | + | chr8.3:19009258-19009277 | MS.gene72990:intron | 25.0% |
| !! | CACTTTATGAATTTTCAGAA+CGG | + | chr8.3:19011713-19011732 | MS.gene72990:intron | 25.0% |
| !! | GAAAATTGTATTTTTCTCTC+TGG | + | chr8.3:19009337-19009356 | MS.gene72990:intron | 25.0% |
| !! | TATTTGTTGAATGATCAATG+AGG | + | chr8.3:19009365-19009384 | MS.gene72990:intron | 25.0% |
| !!! | ATTAATTTGTATTTCCCACA+TGG | + | chr8.3:19010971-19010990 | MS.gene72990:intron | 25.0% |
| !!! | TAAACATTTTTTTTCATGGC+AGG | + | chr8.3:19010147-19010166 | MS.gene72990:intron | 25.0% |
| !!! | TATACACTAGTTTTATGAGA+AGG | - | chr8.3:19010072-19010091 | None:intergenic | 25.0% |
| !!! | TATTATTCATAAGCTTGTTG+AGG | + | chr8.3:19009829-19009848 | MS.gene72990:intron | 25.0% |
| !!! | TTATTGCTGATTTCTGAATT+TGG | + | chr8.3:19009631-19009650 | MS.gene72990:intron | 25.0% |
| AAAAATAAGCCAATCCAAAC+AGG | - | chr8.3:19009766-19009785 | None:intergenic | 30.0% | |
| AAACAAAGCTTCTTGCTTAT+TGG | - | chr8.3:19012864-19012883 | None:intergenic | 30.0% | |
| AATTACAGCAATCATGAACT+TGG | + | chr8.3:19010885-19010904 | MS.gene72990:CDS | 30.0% | |
| ACTTATGCAAGTAGTTATCT+CGG | + | chr8.3:19009729-19009748 | MS.gene72990:intron | 30.0% | |
| AGACAGAGAAAAAGAATTGA+AGG | + | chr8.3:19012132-19012151 | MS.gene72990:CDS | 30.0% | |
| AGTATACTTGATACTCATCT+CGG | + | chr8.3:19010516-19010535 | MS.gene72990:CDS | 30.0% | |
| ATCAAACTCATACTTTCCTA+TGG | + | chr8.3:19012306-19012325 | MS.gene72990:intron | 30.0% | |
| CAACAAGAAGAAAACTGTAA+TGG | - | chr8.3:19009683-19009702 | None:intergenic | 30.0% | |
| CAGAAAAGTGAATAAGGAAA+AGG | - | chr8.3:19009189-19009208 | None:intergenic | 30.0% | |
| CATCTTCAACTATTGGAATA+TGG | - | chr8.3:19010638-19010657 | None:intergenic | 30.0% | |
| CTCTTATTGATCCTACAATT+GGG | + | chr8.3:19010490-19010509 | MS.gene72990:CDS | 30.0% | |
| CTTGCAAAAGATAAAAGAGA+TGG | - | chr8.3:19010453-19010472 | None:intergenic | 30.0% | |
| GTAGGATCAATAAGAGAAAA+TGG | - | chr8.3:19010486-19010505 | None:intergenic | 30.0% | |
| TAAGAAACTAATGGCATGTT+TGG | - | chr8.3:19009921-19009940 | None:intergenic | 30.0% | |
| TAAGTTCTCTTTAATGGTGT+TGG | + | chr8.3:19010095-19010114 | MS.gene72990:intron | 30.0% | |
| TAGATCTGTAACTAATTGCA+TGG | + | chr8.3:19012242-19012261 | MS.gene72990:intron | 30.0% | |
| TAGTTATCTCGGATGATTTA+GGG | + | chr8.3:19009740-19009759 | MS.gene72990:intron | 30.0% | |
| TATATCCATGAAATCTCCTT+GGG | - | chr8.3:19010400-19010419 | None:intergenic | 30.0% | |
| TCTCTTATTGATCCTACAAT+TGG | + | chr8.3:19010489-19010508 | MS.gene72990:CDS | 30.0% | |
| TGCTTCTAATGCATGAAAAA+AGG | - | chr8.3:19010248-19010267 | None:intergenic | 30.0% | |
| TGTCTATGTTTATTTGATGC+AGG | + | chr8.3:19012081-19012100 | MS.gene72990:intron | 30.0% | |
| TTTCATAAACTGTCAGGAAT+TGG | + | chr8.3:19012371-19012390 | MS.gene72990:intron | 30.0% | |
| TTTGACTGTCATATATGACA+TGG | + | chr8.3:19011442-19011461 | MS.gene72990:intron | 30.0% | |
| ! | CTAGCAGCATATTTTATAAC+AGG | - | chr8.3:19012543-19012562 | None:intergenic | 30.0% |
| ! | CTTTTCGACTTCATAGATAT+TGG | + | chr8.3:19012626-19012645 | MS.gene72990:CDS | 30.0% |
| ! | GGAATTTGATTTCTATCCAT+AGG | - | chr8.3:19012325-19012344 | None:intergenic | 30.0% |
| ! | TGTTTCTGTTGGTTATTGTT+GGG | + | chr8.3:19012764-19012783 | MS.gene72990:intron | 30.0% |
| ! | TTGCATTTTCATAAACTGTC+AGG | + | chr8.3:19012365-19012384 | MS.gene72990:intron | 30.0% |
| !! | GTGTCACTTATTTCTTACAT+AGG | + | chr8.3:19012014-19012033 | MS.gene72990:intron | 30.0% |
| !! | TTGTTTCTGTTGGTTATTGT+TGG | + | chr8.3:19012763-19012782 | MS.gene72990:intron | 30.0% |
| !!! | GTTTTTTTGTTATTGATGGC+CGG | + | chr8.3:19010347-19010366 | MS.gene72990:intron | 30.0% |
| !!! | TAAGCAAGAAGCTTTGTTTT+TGG | + | chr8.3:19012865-19012884 | MS.gene72990:CDS | 30.0% |
| !!! | TTTTTTTGTTATTGATGGCC+GGG | + | chr8.3:19010348-19010367 | MS.gene72990:intron | 30.0% |
| AAAAGAATTGAAGGCCATTG+CGG | + | chr8.3:19012141-19012160 | MS.gene72990:CDS | 35.0% | |
| AACTAATGGCATGTTTGGAT+TGG | - | chr8.3:19009916-19009935 | None:intergenic | 35.0% | |
| AAGAATGATAGGCAGAAAGT+TGG | - | chr8.3:19012693-19012712 | None:intergenic | 35.0% | |
| AAGGACTATACTTCATCAGA+TGG | - | chr8.3:19011693-19011712 | None:intergenic | 35.0% | |
| AAGTTATAGGTTCTACGAGA+TGG | + | chr8.3:19012040-19012059 | MS.gene72990:intron | 35.0% | |
| ACATGAGTTCATGCAGAATA+GGG | + | chr8.3:19011908-19011927 | MS.gene72990:CDS | 35.0% | |
| AGAAATGTACCTTGTCACTA+TGG | + | chr8.3:19010279-19010298 | MS.gene72990:intron | 35.0% | |
| AGAATCTCAAAGAAAGTTGC+AGG | + | chr8.3:19012204-19012223 | MS.gene72990:CDS | 35.0% | |
| AGAATGATAGGCAGAAAGTT+GGG | - | chr8.3:19012692-19012711 | None:intergenic | 35.0% | |
| AGCATGTATGCATCGAATAA+AGG | - | chr8.3:19012575-19012594 | None:intergenic | 35.0% | |
| AGGACTATACTTCATCAGAT+GGG | - | chr8.3:19011692-19011711 | None:intergenic | 35.0% | |
| AGTATACTTCTCCCAATTGT+AGG | - | chr8.3:19010504-19010523 | None:intergenic | 35.0% | |
| ATATCCATGAAATCTCCTTG+GGG | - | chr8.3:19010399-19010418 | None:intergenic | 35.0% | |
| ATCTGGTAAATTCTCCAATG+TGG | - | chr8.3:19010796-19010815 | None:intergenic | 35.0% | |
| ATGTATGCATCGAATAAAGG+AGG | - | chr8.3:19012572-19012591 | None:intergenic | 35.0% | |
| CATATAAAATTAGAGGAGCC+CGG | - | chr8.3:19010947-19010966 | None:intergenic | 35.0% | |
| CCAATAGTTGAAGATGTTAC+TGG | + | chr8.3:19010642-19010661 | MS.gene72990:CDS | 35.0% | |
| CCAGTAACATCTTCAACTAT+TGG | - | chr8.3:19010645-19010664 | None:intergenic | 35.0% | |
| CTATATCCATGAAATCTCCT+TGG | - | chr8.3:19010401-19010420 | None:intergenic | 35.0% | |
| CTTCATAGATATTGGTAGAC+AGG | + | chr8.3:19012634-19012653 | MS.gene72990:CDS | 35.0% | |
| GCAAAAGATAAAAGAGATGG+AGG | - | chr8.3:19010450-19010469 | None:intergenic | 35.0% | |
| GCTTATGAGATCTTAGGAAT+CGG | - | chr8.3:19012506-19012525 | None:intergenic | 35.0% | |
| GTAGTTATCTCGGATGATTT+AGG | + | chr8.3:19009739-19009758 | MS.gene72990:intron | 35.0% | |
| GTGTCAATTGTCTCTTGATT+AGG | - | chr8.3:19009111-19009130 | None:intergenic | 35.0% | |
| GTTAATGCATATTTCAGCGA+AGG | + | chr8.3:19010196-19010215 | MS.gene72990:CDS | 35.0% | |
| TAGAAGCAAACTAGCATAAG+AGG | - | chr8.3:19010025-19010044 | None:intergenic | 35.0% | |
| TCATATATGACATGGTACTG+TGG | + | chr8.3:19011450-19011469 | MS.gene72990:intron | 35.0% | |
| TCTGGTAAATTCTCCAATGT+GGG | - | chr8.3:19010795-19010814 | None:intergenic | 35.0% | |
| TGAAGAAGATGAAGATGTAG+AGG | + | chr8.3:19011518-19011537 | MS.gene72990:CDS | 35.0% | |
| TTAGCGTTAGATCTTACTCT+TGG | + | chr8.3:19009965-19009984 | MS.gene72990:intron | 35.0% | |
| TTATAACAGGCATCTTTACC+TGG | - | chr8.3:19012530-19012549 | None:intergenic | 35.0% | |
| TTATGGTCATTGTAGATTGC+AGG | + | chr8.3:19011479-19011498 | MS.gene72990:intron | 35.0% | |
| TTTCAATATTTACAGTGGGG+TGG | + | chr8.3:19011789-19011808 | MS.gene72990:intron | 35.0% | |
| TTTCATGTCAGAAGCAATTC+AGG | - | chr8.3:19011214-19011233 | None:intergenic | 35.0% | |
| ! | AACTTAAAGGTGTACCTTCA+AGG | - | chr8.3:19011078-19011097 | None:intergenic | 35.0% |
| ! | ATGATCCTTGCTGTCAATTT+GGG | + | chr8.3:19009552-19009571 | MS.gene72990:intron | 35.0% |
| ! | GTTTCTGTTGGTTATTGTTG+GGG | + | chr8.3:19012765-19012784 | MS.gene72990:intron | 35.0% |
| ! | TATGATCCTTGCTGTCAATT+TGG | + | chr8.3:19009551-19009570 | MS.gene72990:intron | 35.0% |
| !! | TCTTGTTGACTTAAAGCTAG+AGG | + | chr8.3:19009576-19009595 | MS.gene72990:intron | 35.0% |
| !! | TTAGGGGAAGTATCTTCAAA+TGG | + | chr8.3:19011330-19011349 | MS.gene72990:CDS | 35.0% |
| AAAAGTGATTGCCTTGGGTT+AGG | - | chr8.3:19011020-19011039 | None:intergenic | 40.0% | |
| AAGAGTAAGCAACACCGAAA+TGG | - | chr8.3:19012347-19012366 | None:intergenic | 40.0% | |
| AAGATCCCAAATTGACAGCA+AGG | - | chr8.3:19009560-19009579 | None:intergenic | 40.0% | |
| AAGGAATTGTCATTATGCGG+AGG | - | chr8.3:19011669-19011688 | None:intergenic | 40.0% | |
| AATTGCACTGCAAAAGCTTC+AGG | + | chr8.3:19009161-19009180 | MS.gene72990:CDS | 40.0% | |
| AGAGTAAGCAACACCGAAAT+GGG | - | chr8.3:19012346-19012365 | None:intergenic | 40.0% | |
| ATGACACTCCCATGTATATC+TGG | - | chr8.3:19010687-19010706 | None:intergenic | 40.0% | |
| ATTCCGATAGAGGATAAGGA+TGG | + | chr8.3:19010588-19010607 | MS.gene72990:CDS | 40.0% | |
| CACATGAGTTCATGCAGAAT+AGG | + | chr8.3:19011907-19011926 | MS.gene72990:CDS | 40.0% | |
| CATGAGTTCATGCAGAATAG+GGG | + | chr8.3:19011909-19011928 | MS.gene72990:CDS | 40.0% | |
| CGAAGGAGACAGAAATTTGA+TGG | + | chr8.3:19010213-19010232 | MS.gene72990:CDS | 40.0% | |
| CTACCATCCTTATCCTCTAT+CGG | - | chr8.3:19010594-19010613 | None:intergenic | 40.0% | |
| CTATACTTCATCAGATGGGA+AGG | - | chr8.3:19011688-19011707 | None:intergenic | 40.0% | |
| CTATTCTGCATGAACTCATG+TGG | - | chr8.3:19011909-19011928 | None:intergenic | 40.0% | |
| CTGATGGTAAAAATGCCAGA+TGG | + | chr8.3:19012465-19012484 | MS.gene72990:CDS | 40.0% | |
| CTGTCAGGTGAAGAATTAGT+CGG | - | chr8.3:19010753-19010772 | None:intergenic | 40.0% | |
| GATGTAACACCATAGTGACA+AGG | - | chr8.3:19010291-19010310 | None:intergenic | 40.0% | |
| GCAAATTCCGATAGAGGATA+AGG | + | chr8.3:19010584-19010603 | MS.gene72990:CDS | 40.0% | |
| GGGAAGGAATTGTCATTATG+CGG | - | chr8.3:19011672-19011691 | None:intergenic | 40.0% | |
| TAAAGTCAAAGTTACGGCTC+CGG | - | chr8.3:19011166-19011185 | None:intergenic | 40.0% | |
| TATATGACATGGTACTGTGG+TGG | + | chr8.3:19011453-19011472 | MS.gene72990:intron | 40.0% | |
| TCTACGAGATGGTCTAATTG+TGG | + | chr8.3:19012051-19012070 | MS.gene72990:intron | 40.0% | |
| TCTATGTCATTGCTGCTATC+TGG | - | chr8.3:19010813-19010832 | None:intergenic | 40.0% | |
| TCTCTTGGATGAGTGACAAA+CGG | - | chr8.3:19010558-19010577 | None:intergenic | 40.0% | |
| TGATGAAGCAGTAATGCTTG+AGG | + | chr8.3:19011830-19011849 | MS.gene72990:CDS | 40.0% | |
| TGCAATTGGTTGAGAAACAC+CGG | - | chr8.3:19009148-19009167 | None:intergenic | 40.0% | |
| TGCAGTTTCATTGTCCTTGA+AGG | + | chr8.3:19011061-19011080 | MS.gene72990:CDS | 40.0% | |
| TGGTACTGTGGTGGTAATTA+TGG | + | chr8.3:19011462-19011481 | MS.gene72990:intron | 40.0% | |
| TGTCTGCTTCTAATGATGCA+AGG | - | chr8.3:19012117-19012136 | None:intergenic | 40.0% | |
| ! | CCTCTAAAAGTGATTGCCTT+GGG | - | chr8.3:19011025-19011044 | None:intergenic | 40.0% |
| ! | GTTCTCTTTAATGGTGTTGG+AGG | + | chr8.3:19010098-19010117 | MS.gene72990:intron | 40.0% |
| ! | TCCTCTAAAAGTGATTGCCT+TGG | - | chr8.3:19011026-19011045 | None:intergenic | 40.0% |
| ! | TGAAGCTTTTGCAGTGCAAT+TGG | - | chr8.3:19009162-19009181 | None:intergenic | 40.0% |
| ! | TGCATGAAAAAAGGCATACC+TGG | - | chr8.3:19010239-19010258 | None:intergenic | 40.0% |
| !! | GGGAAGTATCTTCAAATGGA+AGG | + | chr8.3:19011334-19011353 | MS.gene72990:CDS | 40.0% |
| !!! | TTTTTTTCATGGCAGGAGCA+TGG | + | chr8.3:19010154-19010173 | MS.gene72990:intron | 40.0% |
| AAAGTCAAAGTTACGGCTCC+GGG | - | chr8.3:19011165-19011184 | None:intergenic | 45.0% | |
| AAGAAAGTTGCAGGAAGAGC+AGG | + | chr8.3:19012213-19012232 | MS.gene72990:CDS | 45.0% | |
| ACTCATGTGGTGCATAAGCA+CGG | - | chr8.3:19011896-19011915 | None:intergenic | 45.0% | |
| AGATGCCTTTGGTTAGGAAC+AGG | + | chr8.3:19011541-19011560 | MS.gene72990:CDS | 45.0% | |
| AGATGTAGAGGAGATGCCTT+TGG | + | chr8.3:19011530-19011549 | MS.gene72990:CDS | 45.0% | |
| AGCACTTTCCTCAACACCAA+AGG | - | chr8.3:19012816-19012835 | None:intergenic | 45.0% | |
| AGTCAATCAACTCCTCAAGC+TGG | + | chr8.3:19010612-19010631 | MS.gene72990:CDS | 45.0% | |
| ATGCTTGAGGCTGCAATGTT+CGG | + | chr8.3:19011843-19011862 | MS.gene72990:CDS | 45.0% | |
| ATTAATCGAGTCCAGCACAC+TGG | + | chr8.3:19011614-19011633 | MS.gene72990:CDS | 45.0% | |
| ATTGGAATATGGCCAGCTTG+AGG | - | chr8.3:19010627-19010646 | None:intergenic | 45.0% | |
| CAAACCAAGCAGTTACAGAC+TGG | + | chr8.3:19012658-19012677 | MS.gene72990:CDS | 45.0% | |
| CAGCAGAGCAAGAAAAAGCA+CGG | + | chr8.3:19011244-19011263 | MS.gene72990:CDS | 45.0% | |
| CATGAAATCTCCTTGGGGAA+CGG | - | chr8.3:19010394-19010413 | None:intergenic | 45.0% | |
| CCCAAGGTCCAGATATACAT+GGG | + | chr8.3:19010676-19010695 | MS.gene72990:CDS | 45.0% | |
| CCCATGTATATCTGGACCTT+GGG | - | chr8.3:19010679-19010698 | None:intergenic | 45.0% | |
| CCTAAGATCTCATAAGCTCC+AGG | + | chr8.3:19012509-19012528 | MS.gene72990:CDS | 45.0% | |
| CCTGGAGCTTATGAGATCTT+AGG | - | chr8.3:19012512-19012531 | None:intergenic | 45.0% | |
| CTACTCGCGAAGAGGAAAAA+CGG | + | chr8.3:19012173-19012192 | MS.gene72990:CDS | 45.0% | |
| GACACATTCATCAGCATCAC+CGG | + | chr8.3:19009126-19009145 | MS.gene72990:CDS | 45.0% | |
| GGAATTTGCCTTACCTCTCT+TGG | - | chr8.3:19010573-19010592 | None:intergenic | 45.0% | |
| GGTAAGGCAAATTCCGATAG+AGG | + | chr8.3:19010578-19010597 | MS.gene72990:CDS | 45.0% | |
| GTAGACCTGTTCCTAACCAA+AGG | - | chr8.3:19011549-19011568 | None:intergenic | 45.0% | |
| GTTTGTCACTCATCCAAGAG+AGG | + | chr8.3:19010557-19010576 | MS.gene72990:CDS | 45.0% | |
| TAGAGGAGATGCCTTTGGTT+AGG | + | chr8.3:19011535-19011554 | MS.gene72990:CDS | 45.0% | |
| TCAACTCCTTGTGCCTTAGA+TGG | - | chr8.3:19011309-19011328 | None:intergenic | 45.0% | |
| TCACTCATCCAAGAGAGGTA+AGG | + | chr8.3:19010562-19010581 | MS.gene72990:CDS | 45.0% | |
| TCATCATCAGAGGATGGTTC+TGG | - | chr8.3:19012432-19012451 | None:intergenic | 45.0% | |
| TCCCATGTATATCTGGACCT+TGG | - | chr8.3:19010680-19010699 | None:intergenic | 45.0% | |
| TGACAGTGCTGTGAATCTGA+TGG | + | chr8.3:19012449-19012468 | MS.gene72990:CDS | 45.0% | |
| TGGTGGTAGAGAGACTTCTT+TGG | - | chr8.3:19012412-19012431 | None:intergenic | 45.0% | |
| TTGTATTTCCCACATGGTGC+AGG | + | chr8.3:19010977-19010996 | MS.gene72990:intron | 45.0% | |
| ! | AAGGCACAAGGAGTTGACTT+AGG | + | chr8.3:19011312-19011331 | MS.gene72990:CDS | 45.0% |
| ! | AGGCACAAGGAGTTGACTTA+GGG | + | chr8.3:19011313-19011332 | MS.gene72990:CDS | 45.0% |
| ! | CTGTTCTGGTTGTAACACAC+TGG | - | chr8.3:19011142-19011161 | None:intergenic | 45.0% |
| ! | CTTTTTCTTGCTCTGCTGTC+TGG | - | chr8.3:19011242-19011261 | None:intergenic | 45.0% |
| ! | GAGACAGAAATTTGATGGCC+AGG | + | chr8.3:19010218-19010237 | MS.gene72990:CDS | 45.0% |
| ! | GATTTAGGGCCTGTTTGGAT+TGG | + | chr8.3:19009754-19009773 | MS.gene72990:intron | 45.0% |
| !! | ATGTGTCACTTAGCTCCACA+GGG | + | chr8.3:19011574-19011593 | MS.gene72990:CDS | 45.0% |
| !! | CCCAAGGCAATCACTTTTAG+AGG | + | chr8.3:19011022-19011041 | MS.gene72990:CDS | 45.0% |
| !! | TGAGGAAAGTGCTGTGACAT+TGG | + | chr8.3:19012823-19012842 | MS.gene72990:CDS | 45.0% |
| AAAGCACGGCGTGTACAAGA+AGG | + | chr8.3:19011258-19011277 | MS.gene72990:CDS | 50.0% | |
| AATGATTCGCGCAGCCATTG+AGG | + | chr8.3:19010839-19010858 | MS.gene72990:CDS | 50.0% | |
| ACTGGAACTGTTCATGCCCA+AGG | + | chr8.3:19010660-19010679 | MS.gene72990:CDS | 50.0% | |
| CACAGCACTGTCATCATCAG+AGG | - | chr8.3:19012442-19012461 | None:intergenic | 50.0% | |
| CGTGTACAAGAAGGTGATGC+TGG | + | chr8.3:19011267-19011286 | MS.gene72990:CDS | 50.0% | |
| CGTTCCCCAAGGAGATTTCA+TGG | + | chr8.3:19010392-19010411 | MS.gene72990:CDS | 50.0% | |
| CTCACCAGTCTGTAACTGCT+TGG | - | chr8.3:19012665-19012684 | None:intergenic | 50.0% | |
| GAAACTGCATGAGCAAGCTC+AGG | - | chr8.3:19011050-19011069 | None:intergenic | 50.0% | |
| GAATTCATTGCAGCAGCCAC+AGG | - | chr8.3:19011390-19011409 | None:intergenic | 50.0% | |
| GCACTGTCATCATCAGAGGA+TGG | - | chr8.3:19012438-19012457 | None:intergenic | 50.0% | |
| GCCCAAGGTCCAGATATACA+TGG | + | chr8.3:19010675-19010694 | MS.gene72990:CDS | 50.0% | |
| GCGCTTGATAAGGGAACAAC+AGG | + | chr8.3:19011992-19012011 | MS.gene72990:CDS | 50.0% | |
| GCTGTGACATTGGACGAACT+TGG | + | chr8.3:19012833-19012852 | MS.gene72990:CDS | 50.0% | |
| GGCAGGTAAGACCATATCCT+AGG | + | chr8.3:19012786-19012805 | MS.gene72990:intron | 50.0% | |
| GGCGATAACCACTTCCTTCA+GGG | - | chr8.3:19011875-19011894 | None:intergenic | 50.0% | |
| GGTCATTGTAGATTGCAGGC+AGG | + | chr8.3:19011483-19011502 | MS.gene72990:intron | 50.0% | |
| GGTGAAGAATTAGTCGGAGC+AGG | - | chr8.3:19010747-19010766 | None:intergenic | 50.0% | |
| GTGTTACAACCAGAACAGCC+CGG | + | chr8.3:19011144-19011163 | MS.gene72990:intron | 50.0% | |
| TGCAGGACGTGAGTGAATCT+GGG | + | chr8.3:19010994-19011013 | MS.gene72990:intron | 50.0% | |
| ! | ATGTTCGGTGGAATCCCTGA+AGG | + | chr8.3:19011858-19011877 | MS.gene72990:CDS | 50.0% |
| ! | ATTTTCCTCAGCCTCTCGTC+TGG | - | chr8.3:19010868-19010887 | None:intergenic | 50.0% |
| ! | CCTCCAATGATGGTGAAGGA+GGG | - | chr8.3:19011968-19011987 | None:intergenic | 50.0% |
| ! | CGGATGATTTAGGGCCTGTT+TGG | + | chr8.3:19009749-19009768 | MS.gene72990:intron | 50.0% |
| ! | CTGTTGGTTATTGTTGGGGC+AGG | + | chr8.3:19012769-19012788 | MS.gene72990:intron | 50.0% |
| ! | GGCACAAGGAGTTGACTTAG+GGG | + | chr8.3:19011314-19011333 | MS.gene72990:CDS | 50.0% |
| ! | TCATCTCGGTGCAACAAACC+AGG | + | chr8.3:19010530-19010549 | MS.gene72990:CDS | 50.0% |
| ! | TGAGCCTCCAATGATGGTGA+AGG | - | chr8.3:19011972-19011991 | None:intergenic | 50.0% |
| ! | TTTCATGGCAGGAGCATGGT+GGG | + | chr8.3:19010158-19010177 | MS.gene72990:intron | 50.0% |
| !! | CATGTGTCACTTAGCTCCAC+AGG | + | chr8.3:19011573-19011592 | MS.gene72990:CDS | 50.0% |
| !! | TCATCAGAGGATGGTTCTGG+TGG | - | chr8.3:19012429-19012448 | None:intergenic | 50.0% |
| !! | TTCTCCAATGTGGGAGCACT+AGG | - | chr8.3:19010786-19010805 | None:intergenic | 50.0% |
| !! | TTTTCATGGCAGGAGCATGG+TGG | + | chr8.3:19010157-19010176 | MS.gene72990:intron | 50.0% |
| ACTCACGTCCTGCACCATGT+GGG | - | chr8.3:19010988-19011007 | None:intergenic | 55.0% | |
| ACTGGCAGGCACAACAGTTC+CGG | + | chr8.3:19011632-19011651 | MS.gene72990:CDS | 55.0% | |
| AGCATCTTTGCCTGACCCTG+TGG | - | chr8.3:19011592-19011611 | None:intergenic | 55.0% | |
| AGTAGCCTCAGCTTCCGCAA+TGG | - | chr8.3:19012158-19012177 | None:intergenic | 55.0% | |
| CCATATCCTAGGCGTGCCTT+TGG | + | chr8.3:19012797-19012816 | MS.gene72990:CDS | 55.0% | |
| CCCTCCTTCACCATCATTGG+AGG | + | chr8.3:19011965-19011984 | MS.gene72990:CDS | 55.0% | |
| CGGCGATAACCACTTCCTTC+AGG | - | chr8.3:19011876-19011895 | None:intergenic | 55.0% | |
| CTAGGTCTCGCACTACTGTC+AGG | - | chr8.3:19010768-19010787 | None:intergenic | 55.0% | |
| CTCTCGTCTGGATGCCTCAA+TGG | - | chr8.3:19010856-19010875 | None:intergenic | 55.0% | |
| CTTGAGGCTGCAATGTTCGG+TGG | + | chr8.3:19011846-19011865 | MS.gene72990:CDS | 55.0% | |
| GAAATCTCCTTGGGGAACGG+CGG | - | chr8.3:19010391-19010410 | None:intergenic | 55.0% | |
| GAAGGAGGGCGATATGCAAG+AGG | - | chr8.3:19011954-19011973 | None:intergenic | 55.0% | |
| GAGACCTAGTGCTCCCACAT+TGG | + | chr8.3:19010779-19010798 | MS.gene72990:CDS | 55.0% | |
| GGAGGCTCAGCGCTTGATAA+GGG | + | chr8.3:19011983-19012002 | MS.gene72990:CDS | 55.0% | |
| GGTGGAATCCCTGAAGGAAG+TGG | + | chr8.3:19011864-19011883 | MS.gene72990:CDS | 55.0% | |
| GTGAATCTGGGCCTAACCCA+AGG | + | chr8.3:19011006-19011025 | MS.gene72990:CDS | 55.0% | |
| GTGCAGGACGTGAGTGAATC+TGG | + | chr8.3:19010993-19011012 | MS.gene72990:intron | 55.0% | |
| TCACTTAGCTCCACAGGGTC+AGG | + | chr8.3:19011579-19011598 | MS.gene72990:CDS | 55.0% | |
| TCCTGCATGTTGTCCACCTG+TGG | + | chr8.3:19011371-19011390 | MS.gene72990:intron | 55.0% | |
| TCGCCCTCCTTCACCATCAT+TGG | + | chr8.3:19011962-19011981 | MS.gene72990:CDS | 55.0% | |
| TGGAGGCTCAGCGCTTGATA+AGG | + | chr8.3:19011982-19012001 | MS.gene72990:CDS | 55.0% | |
| TTCATTGCAGCAGCCACAGG+TGG | - | chr8.3:19011387-19011406 | None:intergenic | 55.0% | |
| ! | AGGTGATGCTGGAGCACCTA+CGG | + | chr8.3:19011278-19011297 | MS.gene72990:CDS | 55.0% |
| ! | CATTGAGGCATCCAGACGAG+AGG | + | chr8.3:19010854-19010873 | MS.gene72990:CDS | 55.0% |
| ! | CCAAAGGCACGCCTAGGATA+TGG | - | chr8.3:19012800-19012819 | None:intergenic | 55.0% |
| ! | GCCTCCAATGATGGTGAAGG+AGG | - | chr8.3:19011969-19011988 | None:intergenic | 55.0% |
| ! | TATGCAAGAGGTGCAGGCTG+AGG | - | chr8.3:19011942-19011961 | None:intergenic | 55.0% |
| ! | TCAACACCAAAGGCACGCCT+AGG | - | chr8.3:19012806-19012825 | None:intergenic | 55.0% |
| !! | AAGCGCTGAGCCTCCAATGA+TGG | - | chr8.3:19011978-19011997 | None:intergenic | 55.0% |
| !! | TAGGCGTGCCTTTGGTGTTG+AGG | + | chr8.3:19012805-19012824 | MS.gene72990:CDS | 55.0% |
| ACCTACGGCAGGGCCATCTA+AGG | + | chr8.3:19011293-19011312 | MS.gene72990:CDS | 60.0% | |
| AGCTGAGGCTACTCGCGAAG+AGG | + | chr8.3:19012165-19012184 | MS.gene72990:CDS | 60.0% | |
| ATCGAGTCCAGCACACTGGC+AGG | + | chr8.3:19011618-19011637 | MS.gene72990:CDS | 60.0% | |
| CACTCACGTCCTGCACCATG+TGG | - | chr8.3:19010989-19011008 | None:intergenic | 60.0% | |
| GAAGGCCATTGCGGAAGCTG+AGG | + | chr8.3:19012150-19012169 | MS.gene72990:CDS | 60.0% | |
| GATGAGTGACAAACGGCGCC+TGG | - | chr8.3:19010551-19010570 | None:intergenic | 60.0% | |
| GCAGAGCTGTCATGAGAGCC+CGG | - | chr8.3:19010369-19010388 | None:intergenic | 60.0% | |
| GCCACAGGTGGACAACATGC+AGG | - | chr8.3:19011375-19011394 | None:intergenic | 60.0% | |
| GTGGGGTGGCATGTCTTCAG+TGG | + | chr8.3:19011803-19011822 | MS.gene72990:intron | 60.0% | |
| TGTTGTGCCTGCCAGTGTGC+TGG | - | chr8.3:19011628-19011647 | None:intergenic | 60.0% | |
| TTAGGAATCGGCGCCCACGA+CGG | - | chr8.3:19012494-19012513 | None:intergenic | 60.0% | |
| ! | ATGCTGGAGCACCTACGGCA+GGG | + | chr8.3:19011283-19011302 | MS.gene72990:CDS | 60.0% |
| ! | CAAGAGGTGCAGGCTGAGGA+TGG | - | chr8.3:19011938-19011957 | None:intergenic | 60.0% |
| ! | GCAGGGCCATCTAAGGCACA+AGG | + | chr8.3:19011300-19011319 | MS.gene72990:CDS | 60.0% |
| ! | GGGCGATATGCAAGAGGTGC+AGG | - | chr8.3:19011948-19011967 | None:intergenic | 60.0% |
| !! | TGCGGAGGACTGCTGCTTTC+CGG | - | chr8.3:19011654-19011673 | None:intergenic | 60.0% |
| ATGCCAGATGGCAGCCGTCG+TGG | + | chr8.3:19012477-19012496 | MS.gene72990:CDS | 65.0% | |
| GCCTTAGATGGCCCTGCCGT+AGG | - | chr8.3:19011297-19011316 | None:intergenic | 65.0% | |
| GGCATCCAGACGAGAGGCTG+AGG | + | chr8.3:19010860-19010879 | MS.gene72990:CDS | 65.0% | |
| GTTACGGCTCCGGGCTGTTC+TGG | - | chr8.3:19011156-19011175 | None:intergenic | 65.0% | |
| TGCCAGATGGCAGCCGTCGT+GGG | + | chr8.3:19012478-19012497 | MS.gene72990:CDS | 65.0% | |
| ! | GATGCTGGAGCACCTACGGC+AGG | + | chr8.3:19011282-19011301 | MS.gene72990:CDS | 65.0% |
| AGCTCTGCCGCCGTTCCCCA+AGG | + | chr8.3:19010381-19010400 | MS.gene72990:intron | 70.0% | |
| CGCCCACGACGGCTGCCATC+TGG | - | chr8.3:19012483-19012502 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 19009099 | 19012898 | 19009099 | ID=MS.gene72990 |
| chr8.3 | mRNA | 19009099 | 19012898 | 19009099 | ID=MS.gene72990.t1;Parent=MS.gene72990 |
| chr8.3 | exon | 19009099 | 19009182 | 19009099 | ID=MS.gene72990.t1.exon1;Parent=MS.gene72990.t1 |
| chr8.3 | CDS | 19009099 | 19009182 | 19009099 | ID=cds.MS.gene72990.t1;Parent=MS.gene72990.t1 |
| chr8.3 | exon | 19010169 | 19010239 | 19010169 | ID=MS.gene72990.t1.exon2;Parent=MS.gene72990.t1 |
| chr8.3 | CDS | 19010169 | 19010239 | 19010169 | ID=cds.MS.gene72990.t1;Parent=MS.gene72990.t1 |
| chr8.3 | exon | 19010383 | 19010917 | 19010383 | ID=MS.gene72990.t1.exon3;Parent=MS.gene72990.t1 |
| chr8.3 | CDS | 19010383 | 19010917 | 19010383 | ID=cds.MS.gene72990.t1;Parent=MS.gene72990.t1 |
| chr8.3 | exon | 19010999 | 19011082 | 19010999 | ID=MS.gene72990.t1.exon4;Parent=MS.gene72990.t1 |
| chr8.3 | CDS | 19010999 | 19011082 | 19010999 | ID=cds.MS.gene72990.t1;Parent=MS.gene72990.t1 |
| chr8.3 | exon | 19011243 | 19011355 | 19011243 | ID=MS.gene72990.t1.exon5;Parent=MS.gene72990.t1 |
| chr8.3 | CDS | 19011243 | 19011355 | 19011243 | ID=cds.MS.gene72990.t1;Parent=MS.gene72990.t1 |
| chr8.3 | exon | 19011494 | 19011701 | 19011494 | ID=MS.gene72990.t1.exon6;Parent=MS.gene72990.t1 |
| chr8.3 | CDS | 19011494 | 19011701 | 19011494 | ID=cds.MS.gene72990.t1;Parent=MS.gene72990.t1 |
| chr8.3 | exon | 19011804 | 19012013 | 19011804 | ID=MS.gene72990.t1.exon7;Parent=MS.gene72990.t1 |
| chr8.3 | CDS | 19011804 | 19012013 | 19011804 | ID=cds.MS.gene72990.t1;Parent=MS.gene72990.t1 |
| chr8.3 | exon | 19012103 | 19012234 | 19012103 | ID=MS.gene72990.t1.exon8;Parent=MS.gene72990.t1 |
| chr8.3 | CDS | 19012103 | 19012234 | 19012103 | ID=cds.MS.gene72990.t1;Parent=MS.gene72990.t1 |
| chr8.3 | exon | 19012387 | 19012530 | 19012387 | ID=MS.gene72990.t1.exon9;Parent=MS.gene72990.t1 |
| chr8.3 | CDS | 19012387 | 19012530 | 19012387 | ID=cds.MS.gene72990.t1;Parent=MS.gene72990.t1 |
| chr8.3 | exon | 19012623 | 19012679 | 19012623 | ID=MS.gene72990.t1.exon10;Parent=MS.gene72990.t1 |
| chr8.3 | CDS | 19012623 | 19012679 | 19012623 | ID=cds.MS.gene72990.t1;Parent=MS.gene72990.t1 |
| chr8.3 | exon | 19012791 | 19012898 | 19012791 | ID=MS.gene72990.t1.exon11;Parent=MS.gene72990.t1 |
| chr8.3 | CDS | 19012791 | 19012898 | 19012791 | ID=cds.MS.gene72990.t1;Parent=MS.gene72990.t1 |
| Gene Sequence |
| Protein sequence |
