Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73443.t1 | XP_013470110.1 | 98.8 | 411 | 5 | 0 | 5 | 415 | 2 | 412 | 4.70E-226 | 793.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73443.t1 | Q6EWX1 | 66.0 | 412 | 137 | 1 | 4 | 412 | 5 | 416 | 1.9e-154 | 547.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73443.t1 | A0A072VRS3 | 98.8 | 411 | 5 | 0 | 5 | 415 | 2 | 412 | 3.4e-226 | 793.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene041861 | MS.gene73443 | PPI |
| MS.gene73443 | MS.gene061260 | PPI |
| MS.gene35150 | MS.gene73443 | PPI |
| MS.gene023147 | MS.gene73443 | PPI |
| MS.gene73443 | MS.gene041794 | PPI |
| MS.gene28807 | MS.gene73443 | PPI |
| MS.gene73443 | MS.gene028307 | PPI |
| MS.gene22500 | MS.gene73443 | PPI |
| MS.gene61736 | MS.gene73443 | PPI |
| MS.gene36485 | MS.gene73443 | PPI |
| MS.gene61735 | MS.gene73443 | PPI |
| MS.gene072702 | MS.gene73443 | PPI |
| MS.gene73443 | MS.gene07051 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73443.t1 | MTR_1g109100 | 98.783 | 411 | 5 | 0 | 5 | 415 | 2 | 412 | 0.0 | 823 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 65 sgRNAs with CRISPR-Local
Find 297 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCTGTTGAATTTAATAAAA+AGG | 0.163019 | 1.4:+83572482 | MS.gene73443:CDS |
| TGATGACAACTCCCAATTTA+TGG | 0.172707 | 1.4:+83571550 | MS.gene73443:CDS |
| ATGCAAGGAATGTCTGTTTA+AGG | 0.197705 | 1.4:+83574157 | MS.gene73443:CDS |
| TGACTTAATATGCAGATTAT+TGG | 0.208437 | 1.4:+83572413 | MS.gene73443:intron |
| TTAGCACGGCTACCATAAAT+TGG | 0.233162 | 1.4:-83571562 | None:intergenic |
| GATGAAATTAAGAGCTTTAC+AGG | 0.247017 | 1.4:-83574393 | None:intergenic |
| AAGTTTGTGGTACCTGTAAT+TGG | 0.309315 | 1.4:-83569832 | None:intergenic |
| AACAATTCTATTCTTCTTCT+CGG | 0.338321 | 1.4:+83569970 | MS.gene73443:CDS |
| TTCATCTGCTGAACTGCATC+AGG | 0.360075 | 1.4:+83574410 | MS.gene73443:CDS |
| ATTCCAGTTTGGGCTGTCTC+TGG | 0.370514 | 1.4:-83573157 | None:intergenic |
| CTTTGTGAATCTTCTATTGA+AGG | 0.371799 | 1.4:-83572320 | None:intergenic |
| ACTCTCCAGATGCCAATTAC+AGG | 0.380542 | 1.4:+83569820 | MS.gene73443:CDS |
| CGAAGCAGAATCTGCGATAC+TGG | 0.388144 | 1.4:+83569783 | MS.gene73443:CDS |
| TGAATTGAATACCACTGAAA+TGG | 0.393104 | 1.4:-83570150 | None:intergenic |
| AAAACAAACCGCAAGCTTGC+CGG | 0.404588 | 1.4:-83570004 | None:intergenic |
| TGCAGACTGGGTTTCTGTCC+CGG | 0.407219 | 1.4:+83573105 | MS.gene73443:CDS |
| CTCATATGGATTTGCAGACT+GGG | 0.411488 | 1.4:+83573093 | MS.gene73443:CDS |
| TTTGGTAAGCATGAAGAGAT+TGG | 0.418591 | 1.4:+83573974 | MS.gene73443:CDS |
| GCAGGATGCAGATCAGCTAT+TGG | 0.419931 | 1.4:+83572247 | MS.gene73443:intron |
| CATCCAGAGACAGCCCAAAC+TGG | 0.421385 | 1.4:+83573154 | MS.gene73443:CDS |
| TTGCATAGTAATCAGAAGTC+TGG | 0.423976 | 1.4:-83574140 | None:intergenic |
| AATAGAATTGTTGCATGCTT+CGG | 0.424553 | 1.4:-83569959 | None:intergenic |
| TCTCATATGGATTTGCAGAC+TGG | 0.428138 | 1.4:+83573092 | MS.gene73443:CDS |
| ATTCTATGCAGTCTCTCATA+TGG | 0.440596 | 1.4:+83573079 | MS.gene73443:CDS |
| TGATGATATCTCTGCATTCA+AGG | 0.443856 | 1.4:+83570305 | MS.gene73443:CDS |
| TGCAAGGAATGTCTGTTTAA+GGG | 0.455038 | 1.4:+83574158 | MS.gene73443:CDS |
| TGAGTTTGACCTATTTGCTC+TGG | 0.461939 | 1.4:+83571702 | MS.gene73443:CDS |
| TGGTACCTGTAATTGGCATC+TGG | 0.464030 | 1.4:-83569825 | None:intergenic |
| TCATCACAAGCTGTAGTACT+AGG | 0.465590 | 1.4:+83571980 | MS.gene73443:CDS |
| GCAGACTGGGTTTCTGTCCC+GGG | 0.468114 | 1.4:+83573106 | MS.gene73443:CDS |
| AATTCAACAGCATAATCATA+TGG | 0.474595 | 1.4:-83572471 | None:intergenic |
| AGAATATTATAGAAGACAAA+AGG | 0.484882 | 1.4:+83572906 | MS.gene73443:intron |
| ATAACAGTTCACGGTGTAGT+AGG | 0.487465 | 1.4:-83574326 | None:intergenic |
| TCTTTGTGTTGTAGGGAATG+TGG | 0.493089 | 1.4:+83571646 | MS.gene73443:intron |
| CTTCTCGGTCCTCGTGGCTC+CGG | 0.495181 | 1.4:+83569985 | MS.gene73443:CDS |
| CTGTGAAACATAACAGTTCA+CGG | 0.497472 | 1.4:-83574335 | None:intergenic |
| AAAGTCTTACCAGAGCAAAT+AGG | 0.499980 | 1.4:-83571711 | None:intergenic |
| TAGCACGGCTACCATAAATT+GGG | 0.511392 | 1.4:-83571561 | None:intergenic |
| ATTGTTGCATGCTTCGGCGA+CGG | 0.511821 | 1.4:-83569953 | None:intergenic |
| CAAAATATAAAGTTCTAAAA+CGG | 0.513751 | 1.4:-83573955 | None:intergenic |
| AATACCACTGAAATGGAGTC+GGG | 0.517876 | 1.4:-83570143 | None:intergenic |
| TCGTGGCTCCGGCAAGCTTG+CGG | 0.535340 | 1.4:+83569996 | MS.gene73443:CDS |
| TGAACTGCATCAGGGACTAA+AGG | 0.543112 | 1.4:+83574419 | MS.gene73443:CDS |
| ACTAGGCATTAGCTGCCGCC+TGG | 0.551424 | 1.4:+83571997 | MS.gene73443:CDS |
| AAACTTCACTTACTTTAGCA+CGG | 0.551854 | 1.4:-83571576 | None:intergenic |
| GAATACCACTGAAATGGAGT+CGG | 0.558816 | 1.4:-83570144 | None:intergenic |
| CAACAGCATAATCATATGGA+AGG | 0.569153 | 1.4:-83572467 | None:intergenic |
| TGTGAATCTTCTATTGAAGG+TGG | 0.575848 | 1.4:-83572317 | None:intergenic |
| AATTGCTAGGCAGTTATGCA+TGG | 0.577746 | 1.4:+83571406 | MS.gene73443:CDS |
| TATGGAAGGCTTGAATCTAT+CGG | 0.580595 | 1.4:-83572453 | None:intergenic |
| AGACTTCTGATTACTATGCA+AGG | 0.582785 | 1.4:+83574142 | MS.gene73443:CDS |
| ACCATCAATGGAAGCGACGG+AGG | 0.594813 | 1.4:+83569737 | None:intergenic |
| AACTTCAATGCAGTAATGAA+AGG | 0.599903 | 1.4:+83574020 | MS.gene73443:CDS |
| CCATCAATGGAAGCGACGGA+GGG | 0.613785 | 1.4:+83569738 | None:intergenic |
| TGTTCAACCAGGAAATTGCT+AGG | 0.615846 | 1.4:+83571393 | MS.gene73443:intron |
| TCAATTGCTATTCTCTAAAG+CGG | 0.616630 | 1.4:+83571433 | MS.gene73443:CDS |
| ATCACCATCAATGGAAGCGA+CGG | 0.616887 | 1.4:+83569734 | None:intergenic |
| TCATCTGCTGAACTGCATCA+GGG | 0.621248 | 1.4:+83574411 | MS.gene73443:CDS |
| ATTCTTCTTCTCGGTCCTCG+TGG | 0.621969 | 1.4:+83569979 | MS.gene73443:CDS |
| ATATCCCGACTCCATTTCAG+TGG | 0.631965 | 1.4:+83570139 | MS.gene73443:CDS |
| TTTCAACAGATGCTTGACAG+AGG | 0.667077 | 1.4:-83572966 | None:intergenic |
| CTTCAATAGAAGATTCACAA+AGG | 0.687687 | 1.4:+83572321 | MS.gene73443:CDS |
| GCAAGCTTGCCGGAGCCACG+AGG | 0.691735 | 1.4:-83569994 | None:intergenic |
| TTATGTTTCACAGACAACAG+AGG | 0.703684 | 1.4:+83574345 | MS.gene73443:CDS |
| CAAAAGTTAGTAGAACGTGA+CGG | 0.704277 | 1.4:+83574669 | MS.gene73443:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAATATATAATTTA+TGG | - | chr1.4:83570194-83570213 | None:intergenic | 0.0% |
| !! | AAAAAATATATAATTTATGG+AGG | - | chr1.4:83570191-83570210 | None:intergenic | 10.0% |
| !! | AAATTATAATATGATATAGA+AGG | - | chr1.4:83570351-83570370 | None:intergenic | 10.0% |
| !! | ATAATTTATTAATCTTATCA+TGG | + | chr1.4:83571294-83571313 | MS.gene73443:intron | 10.0% |
| !! | TTATGAATACTAAATAATAA+AGG | + | chr1.4:83571257-83571276 | MS.gene73443:intron | 10.0% |
| !!! | ATTTTTTAATTTGTATGTTT+TGG | + | chr1.4:83574634-83574653 | MS.gene73443:intron | 10.0% |
| !!! | TAAAACTGTAATTTTTATTT+TGG | + | chr1.4:83571678-83571697 | MS.gene73443:CDS | 10.0% |
| !!! | TATAAAGTAAATAATTTTTG+TGG | + | chr1.4:83574223-83574242 | MS.gene73443:intron | 10.0% |
| !! | AAACAAAAGAGAAAATTAAA+CGG | - | chr1.4:83570073-83570092 | None:intergenic | 15.0% |
| !! | ATAAAAAATGGTTAAAATTC+AGG | - | chr1.4:83570499-83570518 | None:intergenic | 15.0% |
| !! | ATACTAAATAATAAAGGAAT+TGG | + | chr1.4:83571263-83571282 | MS.gene73443:intron | 15.0% |
| !! | ATTTACTTTATATACACATT+TGG | - | chr1.4:83574215-83574234 | None:intergenic | 15.0% |
| !! | CAAATTGAAAATAATAACTA+GGG | - | chr1.4:83570233-83570252 | None:intergenic | 15.0% |
| !! | TAAAAAATGGTTAAAATTCA+GGG | - | chr1.4:83570498-83570517 | None:intergenic | 15.0% |
| !! | TATATATAAGTTAGTAACTA+TGG | + | chr1.4:83572697-83572716 | MS.gene73443:intron | 15.0% |
| !! | TCAAATTGAAAATAATAACT+AGG | - | chr1.4:83570234-83570253 | None:intergenic | 15.0% |
| !!! | CAAAATATAAAGTTCTAAAA+CGG | - | chr1.4:83573958-83573977 | None:intergenic | 15.0% |
| !!! | CAATTTGAATTATATTTTCA+TGG | + | chr1.4:83570246-83570265 | MS.gene73443:intron | 15.0% |
| !!! | TAATATTCTGTAATTTGTAA+AGG | - | chr1.4:83572895-83572914 | None:intergenic | 15.0% |
| !!! | TTTTGAAATATTCATAATCT+CGG | - | chr1.4:83570442-83570461 | None:intergenic | 15.0% |
| !! | AAAATTGAATTGAGAAGAAA+GGG | - | chr1.4:83569859-83569878 | None:intergenic | 20.0% |
| !! | AATTGTGAAGACTTAATAAT+TGG | + | chr1.4:83572619-83572638 | MS.gene73443:intron | 20.0% |
| !! | ACTCTATTAAATTATCAAGT+TGG | + | chr1.4:83570471-83570490 | MS.gene73443:intron | 20.0% |
| !! | AGAATATTATAGAAGACAAA+AGG | + | chr1.4:83572906-83572925 | MS.gene73443:intron | 20.0% |
| !! | CATAAAAATAAAATACAGGT+GGG | - | chr1.4:83574484-83574503 | None:intergenic | 20.0% |
| !! | GATGCATAAAAATAAAATAC+AGG | - | chr1.4:83574488-83574507 | None:intergenic | 20.0% |
| !! | TAAAATTGAATTGAGAAGAA+AGG | - | chr1.4:83569860-83569879 | None:intergenic | 20.0% |
| !! | TAAATAATAAAGGAATTGGA+TGG | + | chr1.4:83571267-83571286 | MS.gene73443:intron | 20.0% |
| !! | TATAATCATAAATGAACATC+TGG | - | chr1.4:83572681-83572700 | None:intergenic | 20.0% |
| !! | TGCTGTTGAATTTAATAAAA+AGG | + | chr1.4:83572482-83572501 | MS.gene73443:CDS | 20.0% |
| !! | TTATTCAAACAAAAAGTCAT+GGG | + | chr1.4:83570684-83570703 | MS.gene73443:intron | 20.0% |
| !! | TTTGAATAACAAATGTTAGT+AGG | - | chr1.4:83570673-83570692 | None:intergenic | 20.0% |
| !!! | AAATTCCTGTAAGTATATTT+TGG | + | chr1.4:83572986-83573005 | MS.gene73443:intron | 20.0% |
| !!! | AATGTTTTGTATTACATGTT+TGG | + | chr1.4:83571855-83571874 | MS.gene73443:intron | 20.0% |
| !!! | ACTTGATAATTTAATAGAGT+CGG | - | chr1.4:83570471-83570490 | None:intergenic | 20.0% |
| !!! | ATTAAAACTACCATTTTCAT+AGG | + | chr1.4:83572805-83572824 | MS.gene73443:intron | 20.0% |
| !!! | CGTTTTAGAACTTTATATTT+TGG | + | chr1.4:83573956-83573975 | MS.gene73443:CDS | 20.0% |
| !!! | CTCTTTTGTTTTTTCTTTTT+AGG | + | chr1.4:83570082-83570101 | MS.gene73443:intron | 20.0% |
| !!! | TCTTTATAATTTGGTAATGA+TGG | + | chr1.4:83573339-83573358 | MS.gene73443:intron | 20.0% |
| !!! | TGTAAATTTTCCTATGAAAA+TGG | - | chr1.4:83572818-83572837 | None:intergenic | 20.0% |
| !!! | TGTTTTTTCTTTTTAGGTTT+TGG | + | chr1.4:83570088-83570107 | MS.gene73443:intron | 20.0% |
| !!! | TTAACCATTTTTTATCAAGT+TGG | + | chr1.4:83570504-83570523 | MS.gene73443:intron | 20.0% |
| !!! | TTTTAATTCTCTCAAGTAAA+TGG | + | chr1.4:83570812-83570831 | MS.gene73443:intron | 20.0% |
| ! | AAACTAGAGTAAATGTTTGT+CGG | - | chr1.4:83573659-83573678 | None:intergenic | 25.0% |
| ! | AAATTGAATTGAGAAGAAAG+GGG | - | chr1.4:83569858-83569877 | None:intergenic | 25.0% |
| ! | AACAATTCTATTCTTCTTCT+CGG | + | chr1.4:83569970-83569989 | MS.gene73443:CDS | 25.0% |
| ! | AAGTACCAAAATATACTTAC+AGG | - | chr1.4:83572994-83573013 | None:intergenic | 25.0% |
| ! | AATGATAAAGGAAAATTGGT+TGG | + | chr1.4:83570982-83571001 | MS.gene73443:intron | 25.0% |
| ! | AATTATAAAGAAAACCCAAC+AGG | - | chr1.4:83573330-83573349 | None:intergenic | 25.0% |
| ! | AATTCAACAGCATAATCATA+TGG | - | chr1.4:83572474-83572493 | None:intergenic | 25.0% |
| ! | ACAGTATTAATCTTCAACAA+TGG | + | chr1.4:83571044-83571063 | MS.gene73443:intron | 25.0% |
| ! | ATATATAATTTATGGAGGCA+AGG | - | chr1.4:83570186-83570205 | None:intergenic | 25.0% |
| ! | ATGAGATACTATACAAGAAA+AGG | - | chr1.4:83571357-83571376 | None:intergenic | 25.0% |
| ! | ATTATAAAGAAAACCCAACA+GGG | - | chr1.4:83573329-83573348 | None:intergenic | 25.0% |
| ! | ATTTGACCAGAATTCAAAAA+GGG | - | chr1.4:83571119-83571138 | None:intergenic | 25.0% |
| ! | CCTAAATGATAAAGGAAAAT+TGG | + | chr1.4:83570978-83570997 | MS.gene73443:intron | 25.0% |
| ! | GATTAACAAGCAAATCAAAT+TGG | - | chr1.4:83572156-83572175 | None:intergenic | 25.0% |
| ! | GCATAAAAATAAAATACAGG+TGG | - | chr1.4:83574485-83574504 | None:intergenic | 25.0% |
| ! | GGTCTATAGATTTAATTATG+AGG | - | chr1.4:83573564-83573583 | None:intergenic | 25.0% |
| ! | GTTATTCAAACAAAAAGTCA+TGG | + | chr1.4:83570683-83570702 | MS.gene73443:intron | 25.0% |
| ! | TACAAACTTGTGAAATTCAA+AGG | + | chr1.4:83571150-83571169 | MS.gene73443:intron | 25.0% |
| ! | TACTTGAGAGAATTAAAACT+AGG | - | chr1.4:83570810-83570829 | None:intergenic | 25.0% |
| ! | TGACTTAATATGCAGATTAT+TGG | + | chr1.4:83572413-83572432 | MS.gene73443:intron | 25.0% |
| ! | TTATTAGCTGGTCAAAAATA+TGG | + | chr1.4:83573464-83573483 | MS.gene73443:intron | 25.0% |
| ! | TTGACCAACTTGATAAAAAA+TGG | - | chr1.4:83570511-83570530 | None:intergenic | 25.0% |
| !! | AAGAGCGTATTATAACTATA+AGG | - | chr1.4:83573244-83573263 | None:intergenic | 25.0% |
| !! | AATCTTATTGTTTGTTAACC+AGG | - | chr1.4:83572076-83572095 | None:intergenic | 25.0% |
| !! | ACTTTTTAAACATTCCAGTT+TGG | - | chr1.4:83573171-83573190 | None:intergenic | 25.0% |
| !! | ATATTTTCATGGATTTTTGC+AGG | + | chr1.4:83570257-83570276 | MS.gene73443:intron | 25.0% |
| !! | ATTTGATATGAACCTTTTGT+AGG | + | chr1.4:83571520-83571539 | MS.gene73443:intron | 25.0% |
| !! | CCAATTTTCCTTTATCATTT+AGG | - | chr1.4:83570981-83571000 | None:intergenic | 25.0% |
| !! | CTTGATAATTTAATAGAGTC+GGG | - | chr1.4:83570470-83570489 | None:intergenic | 25.0% |
| !! | CTTTTTAAACATTCCAGTTT+GGG | - | chr1.4:83573170-83573189 | None:intergenic | 25.0% |
| !! | GTTGGGTTTTCTTTATAATT+TGG | + | chr1.4:83573330-83573349 | MS.gene73443:intron | 25.0% |
| !! | TAAAGACTTATTGACTACAA+AGG | + | chr1.4:83573775-83573794 | MS.gene73443:intron | 25.0% |
| !! | TAAAGTAAGTGAAGTTTTCT+TGG | + | chr1.4:83571582-83571601 | MS.gene73443:intron | 25.0% |
| !! | TTGATAATTTAATAGAGTCG+GGG | - | chr1.4:83570469-83570488 | None:intergenic | 25.0% |
| !! | TTTGTTATCTTTGTGTTGTA+GGG | + | chr1.4:83571639-83571658 | MS.gene73443:intron | 25.0% |
| !!! | ATTTGTTATCTTTGTGTTGT+AGG | + | chr1.4:83571638-83571657 | MS.gene73443:intron | 25.0% |
| !!! | TTTAATTTGTATGTTTTGGC+AGG | + | chr1.4:83574638-83574657 | MS.gene73443:intron | 25.0% |
| AAAAGCTTAGCATAGATTAC+TGG | + | chr1.4:83571761-83571780 | MS.gene73443:intron | 30.0% | |
| AAAATACCACCAAATAAGCA+TGG | - | chr1.4:83574279-83574298 | None:intergenic | 30.0% | |
| AAAATTCACACTTTCATACC+TGG | + | chr1.4:83572860-83572879 | MS.gene73443:intron | 30.0% | |
| AAACTTCACTTACTTTAGCA+CGG | - | chr1.4:83571579-83571598 | None:intergenic | 30.0% | |
| AAATACCACCAAATAAGCAT+GGG | - | chr1.4:83574278-83574297 | None:intergenic | 30.0% | |
| AACTGTTACTCTACATTCTA+AGG | - | chr1.4:83570718-83570737 | None:intergenic | 30.0% | |
| AACTTCAATGCAGTAATGAA+AGG | + | chr1.4:83574020-83574039 | MS.gene73443:CDS | 30.0% | |
| AAGATATAAGAGATGCGTTA+AGG | - | chr1.4:83574091-83574110 | None:intergenic | 30.0% | |
| AATAGAATTGTTGCATGCTT+CGG | - | chr1.4:83569962-83569981 | None:intergenic | 30.0% | |
| ACACATCTACATCTACTTAA+AGG | + | chr1.4:83570031-83570050 | MS.gene73443:intron | 30.0% | |
| ACATTTACAGCTATGTAGAA+TGG | + | chr1.4:83571489-83571508 | MS.gene73443:intron | 30.0% | |
| ACTGTTACTCTACATTCTAA+GGG | - | chr1.4:83570717-83570736 | None:intergenic | 30.0% | |
| AGAATGTAGAGTAACAGTTA+AGG | + | chr1.4:83570719-83570738 | MS.gene73443:intron | 30.0% | |
| AGCAAGTAGAAGTAAATGTT+TGG | - | chr1.4:83571896-83571915 | None:intergenic | 30.0% | |
| ATCAAAATAATTGACCATGC+AGG | + | chr1.4:83572229-83572248 | MS.gene73443:intron | 30.0% | |
| ATCCACAGATAAAGTAAATG+AGG | - | chr1.4:83570379-83570398 | None:intergenic | 30.0% | |
| ATTCAACATAAAAAACCCTC+GGG | - | chr1.4:83572526-83572545 | None:intergenic | 30.0% | |
| CACATCTACATCTACTTAAA+GGG | + | chr1.4:83570032-83570051 | MS.gene73443:intron | 30.0% | |
| CATTCTTGCCTAAATGATAA+AGG | + | chr1.4:83570970-83570989 | MS.gene73443:intron | 30.0% | |
| CTTATAGATTTGTCTTCTTG+AGG | + | chr1.4:83571080-83571099 | MS.gene73443:intron | 30.0% | |
| CTTCAATAGAAGATTCACAA+AGG | + | chr1.4:83572321-83572340 | MS.gene73443:CDS | 30.0% | |
| CTTGTGAAATTCAAAGGAAT+TGG | + | chr1.4:83571156-83571175 | MS.gene73443:intron | 30.0% | |
| CTTTGTGAATCTTCTATTGA+AGG | - | chr1.4:83572323-83572342 | None:intergenic | 30.0% | |
| GAATGTAGAGTAACAGTTAA+GGG | + | chr1.4:83570720-83570739 | MS.gene73443:intron | 30.0% | |
| GAATTTCACAAGTTTGTAGT+AGG | - | chr1.4:83571148-83571167 | None:intergenic | 30.0% | |
| GATGAAATTAAGAGCTTTAC+AGG | - | chr1.4:83574396-83574415 | None:intergenic | 30.0% | |
| GATTCAACATAAAAAACCCT+CGG | - | chr1.4:83572527-83572546 | None:intergenic | 30.0% | |
| GATTTGACCAGAATTCAAAA+AGG | - | chr1.4:83571120-83571139 | None:intergenic | 30.0% | |
| GTCAATTACCATTGATATCT+AGG | - | chr1.4:83573585-83573604 | None:intergenic | 30.0% | |
| TATGGAAGAACTTAAACACT+TGG | + | chr1.4:83573482-83573501 | MS.gene73443:intron | 30.0% | |
| TATTCATTTCGCATACTACT+TGG | + | chr1.4:83572566-83572585 | MS.gene73443:intron | 30.0% | |
| TCTATAGACCTAGATATCAA+TGG | + | chr1.4:83573574-83573593 | MS.gene73443:intron | 30.0% | |
| TGAAATTCAAAGGAATTGGA+TGG | + | chr1.4:83571160-83571179 | MS.gene73443:intron | 30.0% | |
| TGAATTGAATACCACTGAAA+TGG | - | chr1.4:83570153-83570172 | None:intergenic | 30.0% | |
| TGTGCTTCAACTAAAGAATA+CGG | - | chr1.4:83573835-83573854 | None:intergenic | 30.0% | |
| TTGTAAAGGATTTCTTTACC+AGG | - | chr1.4:83572881-83572900 | None:intergenic | 30.0% | |
| ! | ATTTCCTATTTTCAGTGATC+AGG | + | chr1.4:83572036-83572055 | MS.gene73443:intron | 30.0% |
| ! | ATTTTTGACCAGCTAATAAG+CGG | - | chr1.4:83573463-83573482 | None:intergenic | 30.0% |
| ! | CTGATGTATTGTGATTTTTG+AGG | + | chr1.4:83570839-83570858 | MS.gene73443:intron | 30.0% |
| ! | GAAGTTTTCTTGGTTGAAAA+AGG | + | chr1.4:83571592-83571611 | MS.gene73443:intron | 30.0% |
| ! | GTTTTGTCAGTTAACTTACA+GGG | - | chr1.4:83574458-83574477 | None:intergenic | 30.0% |
| ! | TATTGAGCAATTTGCTTCTT+TGG | - | chr1.4:83573509-83573528 | None:intergenic | 30.0% |
| ! | TCAATTGCTATTCTCTAAAG+CGG | + | chr1.4:83571433-83571452 | MS.gene73443:CDS | 30.0% |
| ! | TCTTTGAGTTCTTTCAATCA+TGG | + | chr1.4:83574570-83574589 | MS.gene73443:intron | 30.0% |
| ! | TGTTTTGTCAGTTAACTTAC+AGG | - | chr1.4:83574459-83574478 | None:intergenic | 30.0% |
| ! | TTGCTTACTAATTTTCTGCA+GGG | + | chr1.4:83571911-83571930 | MS.gene73443:intron | 30.0% |
| !! | ACCTTAGATTATTTCTGGTT+AGG | + | chr1.4:83571201-83571220 | MS.gene73443:intron | 30.0% |
| !! | TTGCTTTGTTTGCAATACAA+GGG | + | chr1.4:83570910-83570929 | MS.gene73443:intron | 30.0% |
| AAAAAACCCTCGGGATAAAA+AGG | - | chr1.4:83572517-83572536 | None:intergenic | 35.0% | |
| AAAGCTGTGATGCTTTCATT+AGG | + | chr1.4:83571226-83571245 | MS.gene73443:intron | 35.0% | |
| AAAGTCTTACCAGAGCAAAT+AGG | - | chr1.4:83571714-83571733 | None:intergenic | 35.0% | |
| AACATTTCACACAGAACACA+CGG | - | chr1.4:83571841-83571860 | None:intergenic | 35.0% | |
| AAGTTTGTGGTACCTGTAAT+TGG | - | chr1.4:83569835-83569854 | None:intergenic | 35.0% | |
| AGACTTCTGATTACTATGCA+AGG | + | chr1.4:83574142-83574161 | MS.gene73443:CDS | 35.0% | |
| AGTAGTCATAGGACTAATCT+GGG | + | chr1.4:83570571-83570590 | MS.gene73443:intron | 35.0% | |
| AGTTTCTACATGAAGACCAA+CGG | - | chr1.4:83573895-83573914 | None:intergenic | 35.0% | |
| ATGCAAGGAATGTCTGTTTA+AGG | + | chr1.4:83574157-83574176 | MS.gene73443:CDS | 35.0% | |
| ATTCTATGCAGTCTCTCATA+TGG | + | chr1.4:83573079-83573098 | MS.gene73443:CDS | 35.0% | |
| CAAAAGTTAGTAGAACGTGA+CGG | + | chr1.4:83574669-83574688 | MS.gene73443:CDS | 35.0% | |
| CAAATTCGAATCCCAGTAAT+GGG | - | chr1.4:83570778-83570797 | None:intergenic | 35.0% | |
| CAACAGCATAATCATATGGA+AGG | - | chr1.4:83572470-83572489 | None:intergenic | 35.0% | |
| CAGGTCTAAATAGTTATACC+TGG | + | chr1.4:83572055-83572074 | MS.gene73443:intron | 35.0% | |
| CATCAAATGATGCCTACAAA+AGG | - | chr1.4:83571535-83571554 | None:intergenic | 35.0% | |
| CCATATAACCCATGTGTTAA+GGG | + | chr1.4:83573681-83573700 | MS.gene73443:intron | 35.0% | |
| CTGTGAAACATAACAGTTCA+CGG | - | chr1.4:83574338-83574357 | None:intergenic | 35.0% | |
| CTGTTACTCTACATTCTAAG+GGG | - | chr1.4:83570716-83570735 | None:intergenic | 35.0% | |
| GCCTAACCAGAAATAATCTA+AGG | - | chr1.4:83571205-83571224 | None:intergenic | 35.0% | |
| GTGAATGCAAAGAACTGAAT+AGG | - | chr1.4:83572745-83572764 | None:intergenic | 35.0% | |
| GTTATATGTTACATGTGCAG+AGG | + | chr1.4:83574592-83574611 | MS.gene73443:intron | 35.0% | |
| GTTGTGTGATGTACAAAGTA+TGG | + | chr1.4:83572112-83572131 | MS.gene73443:intron | 35.0% | |
| GTTTGACATCATATTCAGCA+TGG | - | chr1.4:83572384-83572403 | None:intergenic | 35.0% | |
| TAAGTAGATGTAGATGTGTG+TGG | - | chr1.4:83570030-83570049 | None:intergenic | 35.0% | |
| TAGACCTGATCACTGAAAAT+AGG | - | chr1.4:83572043-83572062 | None:intergenic | 35.0% | |
| TATCATGAATTTGAGCTTGC+TGG | - | chr1.4:83569926-83569945 | None:intergenic | 35.0% | |
| TATGGAAGGCTTGAATCTAT+CGG | - | chr1.4:83572456-83572475 | None:intergenic | 35.0% | |
| TCAAAGGAATTGGATGGTTA+TGG | + | chr1.4:83571166-83571185 | MS.gene73443:intron | 35.0% | |
| TCAATGGTAATTGACGAAGA+TGG | + | chr1.4:83573590-83573609 | MS.gene73443:intron | 35.0% | |
| TCACAATTGCAGAATATAGC+AGG | - | chr1.4:83572607-83572626 | None:intergenic | 35.0% | |
| TCCATATAACCCATGTGTTA+AGG | + | chr1.4:83573680-83573699 | MS.gene73443:intron | 35.0% | |
| TGAGAATCTATCACTGCATA+AGG | + | chr1.4:83572177-83572196 | MS.gene73443:intron | 35.0% | |
| TGAGTTAAGGGATAAGAAGT+TGG | + | chr1.4:83570636-83570655 | MS.gene73443:intron | 35.0% | |
| TGATGACAACTCCCAATTTA+TGG | + | chr1.4:83571550-83571569 | MS.gene73443:CDS | 35.0% | |
| TGATGATATCTCTGCATTCA+AGG | + | chr1.4:83570305-83570324 | MS.gene73443:CDS | 35.0% | |
| TGCAAGGAATGTCTGTTTAA+GGG | + | chr1.4:83574158-83574177 | MS.gene73443:CDS | 35.0% | |
| TGCCTCATTTACTTTATCTG+TGG | + | chr1.4:83570374-83570393 | MS.gene73443:intron | 35.0% | |
| TGTGAATCTTCTATTGAAGG+TGG | - | chr1.4:83572320-83572339 | None:intergenic | 35.0% | |
| TTATGTTTCACAGACAACAG+AGG | + | chr1.4:83574345-83574364 | MS.gene73443:CDS | 35.0% | |
| TTGCATAGTAATCAGAAGTC+TGG | - | chr1.4:83574143-83574162 | None:intergenic | 35.0% | |
| TTTGGTAAGCATGAAGAGAT+TGG | + | chr1.4:83573974-83573993 | MS.gene73443:CDS | 35.0% | |
| ! | AAGCTTTTAGTAACAGTCAG+AGG | - | chr1.4:83571749-83571768 | None:intergenic | 35.0% |
| ! | AAGTATCCTTTTTATCCCGA+GGG | + | chr1.4:83572508-83572527 | MS.gene73443:intron | 35.0% |
| ! | ACAATGCCCTTTTTGAATTC+TGG | + | chr1.4:83571110-83571129 | MS.gene73443:intron | 35.0% |
| ! | AGCTTTTAGTAACAGTCAGA+GGG | - | chr1.4:83571748-83571767 | None:intergenic | 35.0% |
| ! | ATGCAGTTTCAAAGTTTTCC+CGG | - | chr1.4:83573127-83573146 | None:intergenic | 35.0% |
| ! | ATTTTCTGCAGGGTAAACAA+CGG | + | chr1.4:83571921-83571940 | MS.gene73443:intron | 35.0% |
| ! | CACGTTCTACTAACTTTTGA+AGG | - | chr1.4:83574668-83574687 | None:intergenic | 35.0% |
| ! | CATTTTATATTCTCTCCCGT+TGG | + | chr1.4:83573876-83573895 | MS.gene73443:intron | 35.0% |
| ! | CTTGCTTACTAATTTTCTGC+AGG | + | chr1.4:83571910-83571929 | MS.gene73443:intron | 35.0% |
| ! | GAGCATTTGATCTGTGTTTT+GGG | + | chr1.4:83574512-83574531 | MS.gene73443:intron | 35.0% |
| ! | GTGCATACGTTTTTGCATTT+TGG | + | chr1.4:83572655-83572674 | MS.gene73443:intron | 35.0% |
| ! | TGAGCATTTGATCTGTGTTT+TGG | + | chr1.4:83574511-83574530 | MS.gene73443:intron | 35.0% |
| ! | TGCAATGCTTTTCTTTTTCC+AGG | - | chr1.4:83573858-83573877 | None:intergenic | 35.0% |
| ! | TTCATGGATTTTTGCAGGTT+AGG | + | chr1.4:83570262-83570281 | MS.gene73443:intron | 35.0% |
| ! | TTTTCTCTCCCTTAACACAT+GGG | - | chr1.4:83573692-83573711 | None:intergenic | 35.0% |
| !! | CTTGCTTTGTTTGCAATACA+AGG | + | chr1.4:83570909-83570928 | MS.gene73443:intron | 35.0% |
| !! | TATTTTTACCATGTGTGTGC+AGG | + | chr1.4:83574293-83574312 | MS.gene73443:intron | 35.0% |
| !! | TCTTCAACAATGGATTAGCT+CGG | + | chr1.4:83571054-83571073 | MS.gene73443:intron | 35.0% |
| !!! | TTTTGCAGGTTAGGTTGAAT+GGG | + | chr1.4:83570271-83570290 | MS.gene73443:intron | 35.0% |
| !!! | TTTTTGCAGGTTAGGTTGAA+TGG | + | chr1.4:83570270-83570289 | MS.gene73443:intron | 35.0% |
| AAGGAAAATTGGTTGGCATG+AGG | + | chr1.4:83570989-83571008 | MS.gene73443:intron | 40.0% | |
| AATACCACTGAAATGGAGTC+GGG | - | chr1.4:83570146-83570165 | None:intergenic | 40.0% | |
| AATTGCTAGGCAGTTATGCA+TGG | + | chr1.4:83571406-83571425 | MS.gene73443:CDS | 40.0% | |
| ACACCAATCCCATGCTTATT+TGG | + | chr1.4:83574267-83574286 | MS.gene73443:intron | 40.0% | |
| AGAAACCATGACTCGACAAA+TGG | - | chr1.4:83573306-83573325 | None:intergenic | 40.0% | |
| AGAAACTACCGCTTATTAGC+TGG | + | chr1.4:83573452-83573471 | MS.gene73443:intron | 40.0% | |
| AGAGAATGTGCTACAAAGTG+AGG | - | chr1.4:83570419-83570438 | None:intergenic | 40.0% | |
| AGCATGTGAGAGGATATTCT+TGG | + | chr1.4:83573719-83573738 | MS.gene73443:intron | 40.0% | |
| AGCGCACCTTAGATTATTTC+TGG | + | chr1.4:83571196-83571215 | MS.gene73443:intron | 40.0% | |
| AGCTAATAAGCGGTAGTTTC+TGG | - | chr1.4:83573453-83573472 | None:intergenic | 40.0% | |
| ATAACAGTTCACGGTGTAGT+AGG | - | chr1.4:83574329-83574348 | None:intergenic | 40.0% | |
| ATAACTGCCTAGCAATTTCC+TGG | - | chr1.4:83571403-83571422 | None:intergenic | 40.0% | |
| ATAACTGTAATGCACGTACC+AGG | - | chr1.4:83572018-83572037 | None:intergenic | 40.0% | |
| ATGAGAGACTGCATAGAATC+TGG | - | chr1.4:83573078-83573097 | None:intergenic | 40.0% | |
| CAAGAATGAGAACGTAACGA+AGG | - | chr1.4:83570958-83570977 | None:intergenic | 40.0% | |
| CAGTAGTCATAGGACTAATC+TGG | + | chr1.4:83570570-83570589 | MS.gene73443:intron | 40.0% | |
| CCAAATTCGAATCCCAGTAA+TGG | - | chr1.4:83570779-83570798 | None:intergenic | 40.0% | |
| CCATTACTGGGATTCGAATT+TGG | + | chr1.4:83570776-83570795 | MS.gene73443:intron | 40.0% | |
| CGTAACGAAGGAGACAAATT+AGG | - | chr1.4:83570946-83570965 | None:intergenic | 40.0% | |
| CTCATATGGATTTGCAGACT+GGG | + | chr1.4:83573093-83573112 | MS.gene73443:CDS | 40.0% | |
| CTCGACAAATGGGTAAAGAT+AGG | - | chr1.4:83573295-83573314 | None:intergenic | 40.0% | |
| GAAACCATGACTCGACAAAT+GGG | - | chr1.4:83573305-83573324 | None:intergenic | 40.0% | |
| GAATACCACTGAAATGGAGT+CGG | - | chr1.4:83570147-83570166 | None:intergenic | 40.0% | |
| GAGAATGTGCTACAAAGTGA+GGG | - | chr1.4:83570418-83570437 | None:intergenic | 40.0% | |
| GGAATAGAGCTGCATTTGTT+GGG | - | chr1.4:83570757-83570776 | None:intergenic | 40.0% | |
| GTTAAGGGATAAGAAGTTGG+AGG | + | chr1.4:83570639-83570658 | MS.gene73443:intron | 40.0% | |
| GTTGCAAATGATGTTCAACC+AGG | + | chr1.4:83571382-83571401 | MS.gene73443:intron | 40.0% | |
| GTTTCTACATGAAGACCAAC+GGG | - | chr1.4:83573894-83573913 | None:intergenic | 40.0% | |
| TACAAAGTGAGGGACGAATT+TGG | - | chr1.4:83570408-83570427 | None:intergenic | 40.0% | |
| TAGATTATCCTCCCAGACTT+AGG | + | chr1.4:83573036-83573055 | MS.gene73443:intron | 40.0% | |
| TAGCACGGCTACCATAAATT+GGG | - | chr1.4:83571564-83571583 | None:intergenic | 40.0% | |
| TCATCACAAGCTGTAGTACT+AGG | + | chr1.4:83571980-83571999 | MS.gene73443:CDS | 40.0% | |
| TCTCATATGGATTTGCAGAC+TGG | + | chr1.4:83573092-83573111 | MS.gene73443:CDS | 40.0% | |
| TCTTTGTGTTGTAGGGAATG+TGG | + | chr1.4:83571646-83571665 | MS.gene73443:intron | 40.0% | |
| TGAGTTTGACCTATTTGCTC+TGG | + | chr1.4:83571702-83571721 | MS.gene73443:CDS | 40.0% | |
| TGCAAAAACGTATGCACTAC+AGG | - | chr1.4:83572652-83572671 | None:intergenic | 40.0% | |
| TGTTCAACCAGGAAATTGCT+AGG | + | chr1.4:83571393-83571412 | MS.gene73443:intron | 40.0% | |
| TTAGCACGGCTACCATAAAT+TGG | - | chr1.4:83571565-83571584 | None:intergenic | 40.0% | |
| TTCGCATACTACTTGGATTG+AGG | + | chr1.4:83572573-83572592 | MS.gene73443:intron | 40.0% | |
| TTCTTTAGTTGAAGCACACC+TGG | + | chr1.4:83573837-83573856 | MS.gene73443:intron | 40.0% | |
| TTGTAGTTACCTTTGCCGTT+TGG | + | chr1.4:83572352-83572371 | MS.gene73443:intron | 40.0% | |
| TTTACCCATTTGTCGAGTCA+TGG | + | chr1.4:83573298-83573317 | MS.gene73443:intron | 40.0% | |
| TTTCAACAGATGCTTGACAG+AGG | - | chr1.4:83572969-83572988 | None:intergenic | 40.0% | |
| ! | CAAGTATCCTTTTTATCCCG+AGG | + | chr1.4:83572507-83572526 | MS.gene73443:intron | 40.0% |
| ! | CAGATTAGTCCTATGACTAC+TGG | - | chr1.4:83570572-83570591 | None:intergenic | 40.0% |
| ! | CCCTTAACACATGGGTTATA+TGG | - | chr1.4:83573684-83573703 | None:intergenic | 40.0% |
| ! | GCTTTTAGTAACAGTCAGAG+GGG | - | chr1.4:83571747-83571766 | None:intergenic | 40.0% |
| ! | GTTTTCTCTCCCTTAACACA+TGG | - | chr1.4:83573693-83573712 | None:intergenic | 40.0% |
| ! | TGCAGTTTCAAAGTTTTCCC+GGG | - | chr1.4:83573126-83573145 | None:intergenic | 40.0% |
| !! | AGCTCAACTGGTTTGAGTTA+AGG | + | chr1.4:83570623-83570642 | MS.gene73443:intron | 40.0% |
| !! | CTTCAACAATGGATTAGCTC+GGG | + | chr1.4:83571055-83571074 | MS.gene73443:intron | 40.0% |
| !! | GATTGGTGTCAGATGATCAT+AGG | - | chr1.4:83574256-83574275 | None:intergenic | 40.0% |
| !! | GCTCAACTGGTTTGAGTTAA+GGG | + | chr1.4:83570624-83570643 | MS.gene73443:intron | 40.0% |
| AAAACAAACCGCAAGCTTGC+CGG | - | chr1.4:83570007-83570026 | None:intergenic | 45.0% | |
| AAACTGCTGTAGCATGTGAG+AGG | + | chr1.4:83573709-83573728 | MS.gene73443:intron | 45.0% | |
| ACTCTCCAGATGCCAATTAC+AGG | + | chr1.4:83569820-83569839 | MS.gene73443:CDS | 45.0% | |
| AGTCATAGGACTAATCTGGG+AGG | + | chr1.4:83570574-83570593 | MS.gene73443:intron | 45.0% | |
| AGTCATGGTTTCTCCCTGTT+GGG | + | chr1.4:83573313-83573332 | MS.gene73443:intron | 45.0% | |
| ATAGGACTAATCTGGGAGGT+GGG | + | chr1.4:83570578-83570597 | MS.gene73443:intron | 45.0% | |
| ATATCCCGACTCCATTTCAG+TGG | + | chr1.4:83570139-83570158 | MS.gene73443:CDS | 45.0% | |
| ATGTGCAGAGGTAGTCGTAA+TGG | + | chr1.4:83574604-83574623 | MS.gene73443:intron | 45.0% | |
| CAACAAACTCGCCTAAGTCT+GGG | - | chr1.4:83573050-83573069 | None:intergenic | 45.0% | |
| CACTAACAGCCAGTAGTCAT+AGG | + | chr1.4:83570560-83570579 | MS.gene73443:intron | 45.0% | |
| CCAATCCCATGCTTATTTGG+TGG | + | chr1.4:83574270-83574289 | MS.gene73443:intron | 45.0% | |
| CCACCAAATAAGCATGGGAT+TGG | - | chr1.4:83574273-83574292 | None:intergenic | 45.0% | |
| GAGAAGAAAGGGGAAGTTTG+TGG | - | chr1.4:83569848-83569867 | None:intergenic | 45.0% | |
| GCAGCTCTATTCCCATTACT+GGG | + | chr1.4:83570764-83570783 | MS.gene73443:intron | 45.0% | |
| GGGAATAGAGCTGCATTTGT+TGG | - | chr1.4:83570758-83570777 | None:intergenic | 45.0% | |
| TCAACAAACTCGCCTAAGTC+TGG | - | chr1.4:83573051-83573070 | None:intergenic | 45.0% | |
| TCAGCATGGTTCACTCCAAA+CGG | - | chr1.4:83572370-83572389 | None:intergenic | 45.0% | |
| TCATCTGCTGAACTGCATCA+GGG | + | chr1.4:83574411-83574430 | MS.gene73443:CDS | 45.0% | |
| TGAACTGCATCAGGGACTAA+AGG | + | chr1.4:83574419-83574438 | MS.gene73443:CDS | 45.0% | |
| TGCAGCTCTATTCCCATTAC+TGG | + | chr1.4:83570763-83570782 | MS.gene73443:intron | 45.0% | |
| TGGTACCTGTAATTGGCATC+TGG | - | chr1.4:83569828-83569847 | None:intergenic | 45.0% | |
| TGTGCAGAGGTAGTCGTAAT+GGG | + | chr1.4:83574605-83574624 | MS.gene73443:intron | 45.0% | |
| TTCATCTGCTGAACTGCATC+AGG | + | chr1.4:83574410-83574429 | MS.gene73443:CDS | 45.0% | |
| ! | CGGTAGTTTCTGGAGAAGTA+TGG | - | chr1.4:83573443-83573462 | None:intergenic | 45.0% |
| ! | CTATCACTGCATAAGGTGCT+TGG | + | chr1.4:83572184-83572203 | MS.gene73443:intron | 45.0% |
| ACTGTAATGCACGTACCAGG+CGG | - | chr1.4:83572015-83572034 | None:intergenic | 50.0% | |
| ATTCCAGTTTGGGCTGTCTC+TGG | - | chr1.4:83573160-83573179 | None:intergenic | 50.0% | |
| ATTCTTCTTCTCGGTCCTCG+TGG | + | chr1.4:83569979-83569998 | MS.gene73443:CDS | 50.0% | |
| ATTGTTGCATGCTTCGGCGA+CGG | - | chr1.4:83569956-83569975 | None:intergenic | 50.0% | |
| CATAGGACTAATCTGGGAGG+TGG | + | chr1.4:83570577-83570596 | MS.gene73443:intron | 50.0% | |
| CGAAGCAGAATCTGCGATAC+TGG | + | chr1.4:83569783-83569802 | MS.gene73443:CDS | 50.0% | |
| GAGTCATGGTTTCTCCCTGT+TGG | + | chr1.4:83573312-83573331 | MS.gene73443:intron | 50.0% | |
| GCAGGATGCAGATCAGCTAT+TGG | + | chr1.4:83572247-83572266 | MS.gene73443:intron | 50.0% | |
| TAGCTGATCTGCATCCTGCA+TGG | - | chr1.4:83572246-83572265 | None:intergenic | 50.0% | |
| TGGTTCACTCCAAACGGCAA+AGG | - | chr1.4:83572364-83572383 | None:intergenic | 50.0% | |
| TTCAAACGCCTGCACACACA+TGG | - | chr1.4:83574304-83574323 | None:intergenic | 50.0% | |
| ACTAATCTGGGAGGTGGGTG+GGG | + | chr1.4:83570583-83570602 | MS.gene73443:intron | 55.0% | |
| CAAACTCGCCTAAGTCTGGG+AGG | - | chr1.4:83573047-83573066 | None:intergenic | 55.0% | |
| CATCCAGAGACAGCCCAAAC+TGG | + | chr1.4:83573154-83573173 | MS.gene73443:CDS | 55.0% | |
| GACTAATCTGGGAGGTGGGT+GGG | + | chr1.4:83570582-83570601 | MS.gene73443:intron | 55.0% | |
| TGCAGACTGGGTTTCTGTCC+CGG | + | chr1.4:83573105-83573124 | MS.gene73443:CDS | 55.0% | |
| !! | GTTGGGTTGGGTAGCTCAAC+TGG | + | chr1.4:83570611-83570630 | MS.gene73443:intron | 55.0% |
| ACTAGGCATTAGCTGCCGCC+TGG | + | chr1.4:83571997-83572016 | MS.gene73443:CDS | 60.0% | |
| CTAATCTGGGAGGTGGGTGG+GGG | + | chr1.4:83570584-83570603 | MS.gene73443:intron | 60.0% | |
| GCAGACTGGGTTTCTGTCCC+GGG | + | chr1.4:83573106-83573125 | MS.gene73443:CDS | 60.0% | |
| GGACTAATCTGGGAGGTGGG+TGG | + | chr1.4:83570581-83570600 | MS.gene73443:intron | 60.0% | |
| AGGTGGGTGGGGGTTGGGTT+GGG | + | chr1.4:83570594-83570613 | MS.gene73443:intron | 65.0% | |
| CTTCTCGGTCCTCGTGGCTC+CGG | + | chr1.4:83569985-83570004 | MS.gene73443:CDS | 65.0% | |
| TCGTGGCTCCGGCAAGCTTG+CGG | + | chr1.4:83569996-83570015 | MS.gene73443:CDS | 65.0% | |
| !! | GGTGGGGGTTGGGTTGGGTT+GGG | + | chr1.4:83570599-83570618 | MS.gene73443:intron | 65.0% |
| CTGGGAGGTGGGTGGGGGTT+GGG | + | chr1.4:83570589-83570608 | MS.gene73443:intron | 70.0% | |
| GAGGTGGGTGGGGGTTGGGT+TGG | + | chr1.4:83570593-83570612 | MS.gene73443:intron | 70.0% | |
| GCAAGCTTGCCGGAGCCACG+AGG | - | chr1.4:83569997-83570016 | None:intergenic | 70.0% | |
| TCTGGGAGGTGGGTGGGGGT+TGG | + | chr1.4:83570588-83570607 | MS.gene73443:intron | 70.0% | |
| !! | GGGTGGGGGTTGGGTTGGGT+TGG | + | chr1.4:83570598-83570617 | MS.gene73443:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 83569744 | 83574695 | 83569744 | ID=MS.gene73443 |
| chr1.4 | mRNA | 83569744 | 83574695 | 83569744 | ID=MS.gene73443.t1;Parent=MS.gene73443 |
| chr1.4 | exon | 83569744 | 83569841 | 83569744 | ID=MS.gene73443.t1.exon1;Parent=MS.gene73443.t1 |
| chr1.4 | CDS | 83569744 | 83569841 | 83569744 | ID=cds.MS.gene73443.t1;Parent=MS.gene73443.t1 |
| chr1.4 | exon | 83569927 | 83570017 | 83569927 | ID=MS.gene73443.t1.exon2;Parent=MS.gene73443.t1 |
| chr1.4 | CDS | 83569927 | 83570017 | 83569927 | ID=cds.MS.gene73443.t1;Parent=MS.gene73443.t1 |
| chr1.4 | exon | 83570104 | 83570160 | 83570104 | ID=MS.gene73443.t1.exon3;Parent=MS.gene73443.t1 |
| chr1.4 | CDS | 83570104 | 83570160 | 83570104 | ID=cds.MS.gene73443.t1;Parent=MS.gene73443.t1 |
| chr1.4 | exon | 83570279 | 83570326 | 83570279 | ID=MS.gene73443.t1.exon4;Parent=MS.gene73443.t1 |
| chr1.4 | CDS | 83570279 | 83570326 | 83570279 | ID=cds.MS.gene73443.t1;Parent=MS.gene73443.t1 |
| chr1.4 | exon | 83571404 | 83571454 | 83571404 | ID=MS.gene73443.t1.exon5;Parent=MS.gene73443.t1 |
| chr1.4 | CDS | 83571404 | 83571454 | 83571404 | ID=cds.MS.gene73443.t1;Parent=MS.gene73443.t1 |
| chr1.4 | exon | 83571542 | 83571585 | 83571542 | ID=MS.gene73443.t1.exon6;Parent=MS.gene73443.t1 |
| chr1.4 | CDS | 83571542 | 83571585 | 83571542 | ID=cds.MS.gene73443.t1;Parent=MS.gene73443.t1 |
| chr1.4 | exon | 83571660 | 83571723 | 83571660 | ID=MS.gene73443.t1.exon7;Parent=MS.gene73443.t1 |
| chr1.4 | CDS | 83571660 | 83571723 | 83571660 | ID=cds.MS.gene73443.t1;Parent=MS.gene73443.t1 |
| chr1.4 | exon | 83571932 | 83572018 | 83571932 | ID=MS.gene73443.t1.exon8;Parent=MS.gene73443.t1 |
| chr1.4 | CDS | 83571932 | 83572018 | 83571932 | ID=cds.MS.gene73443.t1;Parent=MS.gene73443.t1 |
| chr1.4 | exon | 83572251 | 83572342 | 83572251 | ID=MS.gene73443.t1.exon9;Parent=MS.gene73443.t1 |
| chr1.4 | CDS | 83572251 | 83572342 | 83572251 | ID=cds.MS.gene73443.t1;Parent=MS.gene73443.t1 |
| chr1.4 | exon | 83572428 | 83572509 | 83572428 | ID=MS.gene73443.t1.exon10;Parent=MS.gene73443.t1 |
| chr1.4 | CDS | 83572428 | 83572509 | 83572428 | ID=cds.MS.gene73443.t1;Parent=MS.gene73443.t1 |
| chr1.4 | exon | 83572908 | 83572993 | 83572908 | ID=MS.gene73443.t1.exon11;Parent=MS.gene73443.t1 |
| chr1.4 | CDS | 83572908 | 83572993 | 83572908 | ID=cds.MS.gene73443.t1;Parent=MS.gene73443.t1 |
| chr1.4 | exon | 83573079 | 83573188 | 83573079 | ID=MS.gene73443.t1.exon12;Parent=MS.gene73443.t1 |
| chr1.4 | CDS | 83573079 | 83573188 | 83573079 | ID=cds.MS.gene73443.t1;Parent=MS.gene73443.t1 |
| chr1.4 | exon | 83573949 | 83574041 | 83573949 | ID=MS.gene73443.t1.exon13;Parent=MS.gene73443.t1 |
| chr1.4 | CDS | 83573949 | 83574041 | 83573949 | ID=cds.MS.gene73443.t1;Parent=MS.gene73443.t1 |
| chr1.4 | exon | 83574115 | 83574179 | 83574115 | ID=MS.gene73443.t1.exon14;Parent=MS.gene73443.t1 |
| chr1.4 | CDS | 83574115 | 83574179 | 83574115 | ID=cds.MS.gene73443.t1;Parent=MS.gene73443.t1 |
| chr1.4 | exon | 83574315 | 83574458 | 83574315 | ID=MS.gene73443.t1.exon15;Parent=MS.gene73443.t1 |
| chr1.4 | CDS | 83574315 | 83574458 | 83574315 | ID=cds.MS.gene73443.t1;Parent=MS.gene73443.t1 |
| chr1.4 | exon | 83574660 | 83574695 | 83574660 | ID=MS.gene73443.t1.exon16;Parent=MS.gene73443.t1 |
| chr1.4 | CDS | 83574660 | 83574695 | 83574660 | ID=cds.MS.gene73443.t1;Parent=MS.gene73443.t1 |
| Gene Sequence |
| Protein sequence |
