Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73650.t1 | XP_024631145.1 | 80.8 | 391 | 40 | 1 | 1 | 356 | 1 | 391 | 1.70E-174 | 622.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73650.t1 | Q9FZ70 | 36.4 | 385 | 196 | 10 | 15 | 356 | 3 | 381 | 1.6e-48 | 194.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73650.t1 | G7I5B2 | 80.8 | 390 | 40 | 1 | 2 | 356 | 12 | 401 | 4.7e-174 | 620.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene056878 | MS.gene73650 | 0.807719 | 4.41E-50 | -1.69E-46 |
| MS.gene059517 | MS.gene73650 | 0.837318 | 5.58E-57 | -1.69E-46 |
| MS.gene060482 | MS.gene73650 | 0.817356 | 3.44E-52 | -1.69E-46 |
| MS.gene060837 | MS.gene73650 | 0.80067 | 1.29E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73650.t1 | MTR_1g021820 | 80.769 | 390 | 40 | 1 | 2 | 356 | 12 | 401 | 0.0 | 612 |
| MS.gene73650.t1 | MTR_1g021825 | 70.960 | 396 | 71 | 4 | 3 | 356 | 2 | 395 | 0.0 | 543 |
| MS.gene73650.t1 | MTR_1g021825 | 70.603 | 398 | 73 | 4 | 1 | 356 | 71 | 466 | 0.0 | 543 |
| MS.gene73650.t1 | MTR_1g013580 | 51.741 | 402 | 140 | 11 | 4 | 355 | 3 | 400 | 2.40e-125 | 368 |
| MS.gene73650.t1 | MTR_2g047872 | 50.864 | 405 | 146 | 7 | 2 | 356 | 5 | 406 | 7.82e-124 | 365 |
| MS.gene73650.t1 | MTR_1g013560 | 48.395 | 405 | 156 | 6 | 2 | 355 | 3 | 405 | 7.68e-120 | 355 |
| MS.gene73650.t1 | MTR_4g057725 | 50.122 | 409 | 149 | 8 | 1 | 356 | 3 | 409 | 6.08e-118 | 350 |
| MS.gene73650.t1 | MTR_2g047848 | 49.114 | 395 | 148 | 7 | 12 | 355 | 1 | 393 | 1.06e-116 | 346 |
| MS.gene73650.t1 | MTR_2g047858 | 50.127 | 393 | 144 | 7 | 14 | 356 | 111 | 501 | 5.24e-115 | 345 |
| MS.gene73650.t1 | MTR_1g014450 | 48.371 | 399 | 153 | 8 | 7 | 355 | 3 | 398 | 4.39e-114 | 340 |
| MS.gene73650.t1 | MTR_1g011400 | 50.765 | 392 | 141 | 7 | 14 | 355 | 3 | 392 | 6.43e-113 | 336 |
| MS.gene73650.t1 | MTR_5g040850 | 48.843 | 389 | 153 | 6 | 12 | 356 | 1 | 387 | 2.68e-112 | 334 |
| MS.gene73650.t1 | MTR_2g091145 | 46.650 | 403 | 165 | 7 | 2 | 355 | 5 | 406 | 5.72e-112 | 334 |
| MS.gene73650.t1 | MTR_1g016340 | 46.602 | 412 | 157 | 11 | 1 | 355 | 5 | 410 | 1.02e-108 | 326 |
| MS.gene73650.t1 | MTR_1g016340 | 47.368 | 399 | 149 | 10 | 14 | 355 | 11 | 405 | 4.87e-108 | 324 |
| MS.gene73650.t1 | MTR_1g013840 | 50.256 | 390 | 144 | 8 | 16 | 356 | 54 | 442 | 1.13e-106 | 322 |
| MS.gene73650.t1 | MTR_1g011430 | 49.598 | 373 | 115 | 6 | 12 | 355 | 1 | 329 | 7.08e-105 | 313 |
| MS.gene73650.t1 | MTR_1g013560 | 47.536 | 345 | 135 | 4 | 2 | 302 | 3 | 345 | 2.51e-102 | 306 |
| MS.gene73650.t1 | MTR_1g011410 | 51.032 | 339 | 124 | 4 | 7 | 305 | 302 | 638 | 2.97e-99 | 308 |
| MS.gene73650.t1 | MTR_1g011410 | 49.051 | 316 | 110 | 3 | 14 | 300 | 3 | 296 | 3.99e-84 | 269 |
| MS.gene73650.t1 | MTR_1g016310 | 46.407 | 334 | 135 | 5 | 1 | 291 | 3 | 335 | 7.53e-98 | 294 |
| MS.gene73650.t1 | MTR_1g016310 | 45.322 | 342 | 143 | 5 | 1 | 299 | 3 | 343 | 4.31e-96 | 293 |
| MS.gene73650.t1 | MTR_1g013610 | 46.687 | 332 | 118 | 5 | 12 | 302 | 1 | 314 | 3.12e-84 | 261 |
| MS.gene73650.t1 | MTR_1g013280 | 42.183 | 339 | 124 | 6 | 61 | 355 | 1 | 311 | 3.75e-73 | 231 |
| MS.gene73650.t1 | MTR_1g028860 | 48.193 | 249 | 117 | 4 | 30 | 270 | 2 | 246 | 8.08e-70 | 221 |
| MS.gene73650.t1 | MTR_0049s0110 | 36.554 | 383 | 196 | 9 | 17 | 356 | 7 | 385 | 2.56e-64 | 211 |
| MS.gene73650.t1 | MTR_2g047852 | 49.339 | 227 | 83 | 3 | 16 | 238 | 7 | 205 | 1.96e-63 | 202 |
| MS.gene73650.t1 | MTR_1g013630 | 56.931 | 202 | 77 | 3 | 14 | 207 | 35 | 234 | 3.17e-63 | 207 |
| MS.gene73650.t1 | MTR_0049s0110 | 37.500 | 320 | 162 | 8 | 17 | 302 | 7 | 322 | 1.89e-55 | 185 |
| MS.gene73650.t1 | MTR_0049s0110 | 37.500 | 320 | 162 | 8 | 17 | 302 | 7 | 322 | 2.43e-55 | 185 |
| MS.gene73650.t1 | MTR_0049s0110 | 38.889 | 270 | 148 | 6 | 17 | 273 | 7 | 272 | 7.36e-53 | 177 |
| MS.gene73650.t1 | MTR_1g013620 | 47.753 | 178 | 81 | 3 | 190 | 355 | 1 | 178 | 3.82e-39 | 139 |
| MS.gene73650.t1 | MTR_5g038430 | 29.333 | 375 | 222 | 8 | 18 | 356 | 96 | 463 | 3.35e-33 | 129 |
| MS.gene73650.t1 | MTR_7g090750 | 27.696 | 408 | 246 | 11 | 12 | 374 | 3 | 406 | 3.42e-27 | 112 |
| MS.gene73650.t1 | MTR_0227s0010 | 33.740 | 246 | 130 | 6 | 18 | 256 | 15 | 234 | 4.61e-26 | 107 |
| MS.gene73650.t1 | MTR_8g095590 | 28.065 | 310 | 165 | 10 | 18 | 300 | 15 | 293 | 2.91e-22 | 98.2 |
| MS.gene73650.t1 | MTR_1g010190 | 60.000 | 65 | 26 | 0 | 252 | 316 | 16 | 80 | 1.93e-20 | 85.5 |
| MS.gene73650.t1 | MTR_3g036250 | 26.330 | 376 | 216 | 12 | 15 | 362 | 2 | 344 | 2.39e-17 | 82.8 |
| MS.gene73650.t1 | MTR_6g013240 | 29.075 | 227 | 132 | 6 | 21 | 223 | 75 | 296 | 4.13e-17 | 83.6 |
| MS.gene73650.t1 | MTR_6g013380 | 29.075 | 227 | 132 | 6 | 21 | 223 | 70 | 291 | 4.92e-17 | 83.2 |
| MS.gene73650.t1 | MTR_1g115245 | 31.739 | 230 | 132 | 9 | 2 | 224 | 16 | 227 | 2.13e-16 | 79.3 |
| MS.gene73650.t1 | MTR_2g100590 | 29.289 | 239 | 148 | 6 | 15 | 243 | 39 | 266 | 7.08e-16 | 79.0 |
| MS.gene73650.t1 | MTR_2g100590 | 29.289 | 239 | 148 | 6 | 15 | 243 | 39 | 266 | 7.23e-16 | 79.0 |
| MS.gene73650.t1 | MTR_7g056447 | 36.410 | 195 | 114 | 6 | 13 | 204 | 4 | 191 | 7.75e-16 | 77.8 |
| MS.gene73650.t1 | MTR_8g015830 | 31.797 | 217 | 114 | 7 | 14 | 202 | 4 | 214 | 9.97e-16 | 79.0 |
| MS.gene73650.t1 | MTR_8g015830 | 31.797 | 217 | 114 | 7 | 14 | 202 | 4 | 214 | 1.09e-15 | 79.0 |
| MS.gene73650.t1 | MTR_2g100590 | 29.289 | 239 | 148 | 6 | 15 | 243 | 39 | 266 | 1.42e-15 | 78.6 |
| MS.gene73650.t1 | MTR_7g095350 | 29.412 | 221 | 136 | 5 | 23 | 223 | 13 | 233 | 1.90e-15 | 77.8 |
| MS.gene73650.t1 | MTR_7g095350 | 29.412 | 221 | 136 | 5 | 23 | 223 | 13 | 233 | 1.94e-15 | 77.8 |
| MS.gene73650.t1 | MTR_7g095350 | 29.412 | 221 | 136 | 5 | 23 | 223 | 21 | 241 | 2.24e-15 | 77.8 |
| MS.gene73650.t1 | MTR_7g095350 | 29.412 | 221 | 136 | 5 | 23 | 223 | 13 | 233 | 4.00e-15 | 77.4 |
| MS.gene73650.t1 | MTR_7g095350 | 29.412 | 221 | 136 | 5 | 23 | 223 | 21 | 241 | 4.39e-15 | 77.0 |
| MS.gene73650.t1 | MTR_1g115250 | 38.514 | 148 | 79 | 6 | 13 | 155 | 27 | 167 | 1.09e-14 | 75.5 |
| MS.gene73650.t1 | MTR_7g056433 | 26.276 | 392 | 234 | 15 | 7 | 370 | 2 | 366 | 2.38e-14 | 74.3 |
| MS.gene73650.t1 | MTR_7g105510 | 29.204 | 226 | 135 | 6 | 21 | 223 | 35 | 258 | 2.80e-14 | 73.6 |
| MS.gene73650.t1 | MTR_2g082850 | 31.492 | 181 | 113 | 4 | 12 | 185 | 16 | 192 | 4.90e-14 | 73.2 |
| MS.gene73650.t1 | MTR_8g014160 | 23.925 | 372 | 240 | 11 | 12 | 355 | 35 | 391 | 7.14e-14 | 72.8 |
| MS.gene73650.t1 | MTR_8g015680 | 30.233 | 215 | 117 | 6 | 12 | 202 | 1 | 206 | 9.66e-14 | 72.8 |
| MS.gene73650.t1 | MTR_8g017280 | 29.143 | 175 | 117 | 3 | 11 | 182 | 29 | 199 | 1.21e-13 | 71.2 |
| MS.gene73650.t1 | MTR_8g017280 | 29.143 | 175 | 117 | 3 | 11 | 182 | 29 | 199 | 1.48e-13 | 72.0 |
| MS.gene73650.t1 | MTR_2g100570 | 30.531 | 226 | 135 | 6 | 13 | 223 | 67 | 285 | 1.64e-13 | 72.0 |
| MS.gene73650.t1 | MTR_2g100570 | 30.531 | 226 | 135 | 6 | 13 | 223 | 67 | 285 | 3.11e-13 | 71.2 |
| MS.gene73650.t1 | MTR_2g100570 | 30.531 | 226 | 135 | 6 | 13 | 223 | 67 | 285 | 3.21e-13 | 71.2 |
| MS.gene73650.t1 | MTR_7g098510 | 24.789 | 355 | 236 | 10 | 18 | 356 | 18 | 357 | 1.54e-12 | 68.6 |
| MS.gene73650.t1 | MTR_7g115270 | 32.143 | 196 | 113 | 7 | 18 | 200 | 12 | 200 | 1.59e-12 | 68.6 |
| MS.gene73650.t1 | MTR_7g025080 | 46.053 | 76 | 40 | 1 | 14 | 88 | 2 | 77 | 3.45e-12 | 67.4 |
| MS.gene73650.t1 | MTR_4g056030 | 27.416 | 445 | 229 | 20 | 13 | 377 | 4 | 434 | 3.83e-12 | 67.8 |
| MS.gene73650.t1 | MTR_7g032380 | 24.860 | 358 | 205 | 14 | 18 | 356 | 11 | 323 | 3.89e-12 | 67.4 |
| MS.gene73650.t1 | MTR_8g467800 | 24.000 | 450 | 251 | 16 | 2 | 373 | 4 | 440 | 4.69e-12 | 67.4 |
| MS.gene73650.t1 | MTR_3g082890 | 27.226 | 393 | 230 | 14 | 4 | 359 | 83 | 456 | 5.04e-12 | 67.4 |
| MS.gene73650.t1 | MTR_8g014260 | 29.225 | 284 | 143 | 13 | 15 | 249 | 13 | 287 | 7.95e-12 | 66.6 |
| MS.gene73650.t1 | MTR_8g015770 | 28.509 | 228 | 118 | 8 | 14 | 202 | 2 | 223 | 9.13e-12 | 67.0 |
| MS.gene73650.t1 | MTR_2g082800 | 32.948 | 173 | 107 | 7 | 13 | 183 | 22 | 187 | 9.67e-12 | 66.2 |
| MS.gene73650.t1 | MTR_5g087940 | 35.461 | 141 | 80 | 3 | 15 | 155 | 23 | 152 | 1.54e-11 | 65.9 |
| MS.gene73650.t1 | MTR_8g467800 | 39.604 | 101 | 55 | 3 | 2 | 101 | 4 | 99 | 1.98e-11 | 65.1 |
| MS.gene73650.t1 | MTR_5g021550 | 32.192 | 146 | 89 | 4 | 14 | 150 | 15 | 159 | 2.61e-11 | 62.0 |
| MS.gene73650.t1 | MTR_7g095560 | 28.194 | 227 | 133 | 7 | 23 | 223 | 16 | 238 | 3.63e-11 | 65.1 |
| MS.gene73650.t1 | MTR_3g040700 | 24.219 | 384 | 238 | 16 | 12 | 376 | 37 | 386 | 4.48e-11 | 64.3 |
| MS.gene73650.t1 | MTR_5g039950 | 28.216 | 241 | 148 | 6 | 18 | 255 | 23 | 241 | 5.95e-11 | 63.9 |
| MS.gene73650.t1 | MTR_7g050670 | 24.047 | 341 | 196 | 12 | 6 | 302 | 5 | 326 | 8.77e-11 | 63.5 |
| MS.gene73650.t1 | MTR_7g088260 | 27.105 | 380 | 219 | 18 | 6 | 356 | 79 | 429 | 9.04e-11 | 63.5 |
| MS.gene73650.t1 | MTR_7g087040 | 29.911 | 224 | 132 | 6 | 23 | 223 | 11 | 232 | 9.17e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73650.t1 | AT1G13570 | 40.000 | 385 | 182 | 10 | 15 | 356 | 3 | 381 | 4.02e-73 | 234 |
| MS.gene73650.t1 | AT1G13570 | 40.000 | 385 | 182 | 10 | 15 | 356 | 3 | 381 | 4.02e-73 | 234 |
| MS.gene73650.t1 | AT1G13570 | 46.552 | 232 | 118 | 4 | 15 | 245 | 3 | 229 | 4.07e-60 | 196 |
| MS.gene73650.t1 | AT5G56440 | 29.787 | 282 | 171 | 11 | 18 | 286 | 2 | 269 | 3.16e-19 | 89.0 |
| MS.gene73650.t1 | AT1G66310 | 28.708 | 418 | 205 | 21 | 13 | 356 | 14 | 412 | 1.47e-17 | 84.3 |
| MS.gene73650.t1 | AT5G22720 | 29.057 | 265 | 167 | 9 | 1 | 252 | 6 | 262 | 1.60e-16 | 81.3 |
| MS.gene73650.t1 | AT3G58860 | 29.658 | 263 | 149 | 9 | 15 | 245 | 4 | 262 | 1.69e-16 | 81.3 |
| MS.gene73650.t1 | AT3G52680 | 30.986 | 213 | 133 | 5 | 18 | 223 | 21 | 226 | 2.02e-16 | 80.9 |
| MS.gene73650.t1 | AT3G52680 | 30.986 | 213 | 133 | 5 | 18 | 223 | 21 | 226 | 2.21e-16 | 80.1 |
| MS.gene73650.t1 | AT3G59200 | 34.928 | 209 | 107 | 10 | 18 | 210 | 7 | 202 | 3.58e-16 | 79.7 |
| MS.gene73650.t1 | AT4G00160 | 31.414 | 191 | 120 | 5 | 18 | 203 | 16 | 200 | 7.85e-16 | 79.0 |
| MS.gene73650.t1 | AT3G59200 | 34.146 | 205 | 114 | 9 | 18 | 210 | 7 | 202 | 8.41e-16 | 79.3 |
| MS.gene73650.t1 | AT4G10400 | 31.132 | 212 | 134 | 5 | 18 | 223 | 2 | 207 | 9.68e-16 | 78.6 |
| MS.gene73650.t1 | AT4G10400 | 31.132 | 212 | 134 | 5 | 18 | 223 | 2 | 207 | 9.68e-16 | 78.6 |
| MS.gene73650.t1 | AT4G10400 | 31.132 | 212 | 134 | 5 | 18 | 223 | 2 | 207 | 9.68e-16 | 78.6 |
| MS.gene73650.t1 | AT3G58960 | 30.000 | 230 | 137 | 7 | 18 | 235 | 2 | 219 | 1.04e-15 | 79.0 |
| MS.gene73650.t1 | AT1G66300 | 26.077 | 418 | 220 | 15 | 13 | 356 | 24 | 426 | 3.32e-15 | 77.4 |
| MS.gene73650.t1 | AT5G22730 | 31.128 | 257 | 150 | 10 | 2 | 244 | 13 | 256 | 3.48e-15 | 77.0 |
| MS.gene73650.t1 | AT5G22730 | 31.128 | 257 | 150 | 10 | 2 | 244 | 13 | 256 | 3.48e-15 | 77.0 |
| MS.gene73650.t1 | AT1G32375 | 23.291 | 395 | 240 | 12 | 18 | 356 | 2 | 389 | 3.92e-15 | 77.0 |
| MS.gene73650.t1 | AT1G32375 | 23.291 | 395 | 240 | 12 | 18 | 356 | 2 | 389 | 3.92e-15 | 77.0 |
| MS.gene73650.t1 | AT5G22730 | 31.128 | 257 | 150 | 10 | 2 | 244 | 13 | 256 | 5.14e-15 | 76.3 |
| MS.gene73650.t1 | AT5G56420 | 31.019 | 216 | 128 | 7 | 18 | 223 | 6 | 210 | 6.78e-15 | 76.3 |
| MS.gene73650.t1 | AT5G56420 | 31.019 | 216 | 128 | 7 | 18 | 223 | 6 | 210 | 6.78e-15 | 76.3 |
| MS.gene73650.t1 | AT5G56420 | 31.019 | 216 | 128 | 7 | 18 | 223 | 6 | 210 | 6.78e-15 | 76.3 |
| MS.gene73650.t1 | AT3G58980 | 30.515 | 272 | 133 | 11 | 18 | 246 | 2 | 260 | 1.17e-14 | 75.9 |
| MS.gene73650.t1 | AT3G26922 | 30.909 | 220 | 134 | 8 | 18 | 227 | 14 | 225 | 1.79e-14 | 73.9 |
| MS.gene73650.t1 | AT3G26922 | 30.909 | 220 | 134 | 8 | 18 | 227 | 14 | 225 | 1.79e-14 | 73.9 |
| MS.gene73650.t1 | AT4G09920 | 30.189 | 212 | 136 | 5 | 18 | 223 | 2 | 207 | 1.93e-14 | 73.6 |
| MS.gene73650.t1 | AT4G09920 | 30.189 | 212 | 136 | 5 | 18 | 223 | 2 | 207 | 1.93e-14 | 73.6 |
| MS.gene73650.t1 | AT4G09920 | 30.189 | 212 | 136 | 5 | 18 | 223 | 2 | 207 | 1.93e-14 | 73.6 |
| MS.gene73650.t1 | AT4G09920 | 30.189 | 212 | 136 | 5 | 18 | 223 | 2 | 207 | 2.00e-14 | 73.9 |
| MS.gene73650.t1 | AT4G09920 | 30.189 | 212 | 136 | 5 | 18 | 223 | 2 | 207 | 2.00e-14 | 73.9 |
| MS.gene73650.t1 | AT4G14103 | 33.503 | 197 | 121 | 7 | 18 | 208 | 8 | 200 | 3.63e-14 | 73.9 |
| MS.gene73650.t1 | AT3G59230 | 33.000 | 200 | 119 | 6 | 18 | 204 | 12 | 209 | 3.74e-14 | 73.9 |
| MS.gene73650.t1 | AT4G14103 | 33.503 | 197 | 121 | 7 | 18 | 208 | 8 | 200 | 3.97e-14 | 73.6 |
| MS.gene73650.t1 | AT4G14103 | 33.503 | 197 | 121 | 7 | 18 | 208 | 8 | 200 | 3.97e-14 | 73.6 |
| MS.gene73650.t1 | AT5G53840 | 26.185 | 401 | 225 | 15 | 16 | 356 | 16 | 405 | 5.00e-14 | 73.6 |
| MS.gene73650.t1 | AT4G13960 | 33.796 | 216 | 128 | 8 | 18 | 224 | 2 | 211 | 6.99e-14 | 73.2 |
| MS.gene73650.t1 | AT4G13960 | 33.796 | 216 | 128 | 8 | 18 | 224 | 2 | 211 | 6.99e-14 | 73.2 |
| MS.gene73650.t1 | AT3G59000 | 32.759 | 232 | 141 | 8 | 18 | 236 | 2 | 231 | 9.31e-14 | 72.8 |
| MS.gene73650.t1 | AT4G00315 | 25.779 | 353 | 184 | 11 | 18 | 302 | 2 | 344 | 9.61e-14 | 72.8 |
| MS.gene73650.t1 | AT5G41840 | 28.458 | 253 | 147 | 8 | 6 | 227 | 2 | 251 | 1.11e-13 | 72.8 |
| MS.gene73650.t1 | AT4G14096 | 31.818 | 220 | 136 | 8 | 18 | 229 | 8 | 221 | 1.21e-13 | 72.4 |
| MS.gene73650.t1 | AT4G14096 | 31.818 | 220 | 136 | 8 | 18 | 229 | 8 | 221 | 1.21e-13 | 72.4 |
| MS.gene73650.t1 | AT3G59190 | 28.139 | 231 | 151 | 8 | 18 | 236 | 12 | 239 | 1.22e-13 | 72.0 |
| MS.gene73650.t1 | AT3G59190 | 28.139 | 231 | 151 | 8 | 18 | 236 | 12 | 239 | 1.84e-13 | 72.0 |
| MS.gene73650.t1 | AT3G58880 | 30.078 | 256 | 159 | 10 | 18 | 259 | 3 | 252 | 1.86e-13 | 72.0 |
| MS.gene73650.t1 | AT3G59000 | 40.678 | 118 | 65 | 3 | 18 | 130 | 2 | 119 | 2.35e-13 | 70.9 |
| MS.gene73650.t1 | AT5G22610 | 27.193 | 228 | 136 | 7 | 18 | 226 | 18 | 234 | 2.89e-13 | 71.2 |
| MS.gene73650.t1 | AT5G56370 | 26.154 | 325 | 187 | 11 | 18 | 300 | 2 | 315 | 3.25e-13 | 70.5 |
| MS.gene73650.t1 | AT4G15060 | 26.385 | 379 | 207 | 14 | 2 | 336 | 156 | 506 | 3.77e-13 | 71.2 |
| MS.gene73650.t1 | AT5G56370 | 25.635 | 394 | 222 | 14 | 18 | 356 | 2 | 379 | 3.92e-13 | 70.9 |
| MS.gene73650.t1 | AT5G56370 | 25.635 | 394 | 222 | 14 | 18 | 356 | 2 | 379 | 3.92e-13 | 70.9 |
| MS.gene73650.t1 | AT1G51370 | 24.932 | 369 | 230 | 11 | 12 | 365 | 14 | 350 | 4.18e-13 | 70.5 |
| MS.gene73650.t1 | AT1G51370 | 24.789 | 355 | 224 | 10 | 12 | 355 | 14 | 336 | 5.03e-13 | 70.1 |
| MS.gene73650.t1 | AT1G51370 | 24.932 | 369 | 230 | 11 | 12 | 365 | 14 | 350 | 5.23e-13 | 70.5 |
| MS.gene73650.t1 | AT2G04230 | 26.882 | 279 | 191 | 8 | 18 | 285 | 13 | 289 | 5.27e-13 | 70.5 |
| MS.gene73650.t1 | AT3G28410 | 27.727 | 220 | 137 | 8 | 15 | 228 | 25 | 228 | 6.52e-13 | 70.1 |
| MS.gene73650.t1 | AT1G55030 | 28.152 | 341 | 167 | 17 | 18 | 301 | 9 | 328 | 6.60e-13 | 70.1 |
| MS.gene73650.t1 | AT1G55030 | 28.152 | 341 | 167 | 17 | 18 | 301 | 19 | 338 | 6.80e-13 | 70.1 |
| MS.gene73650.t1 | AT5G44950 | 27.157 | 313 | 182 | 10 | 18 | 298 | 4 | 302 | 6.98e-13 | 70.1 |
| MS.gene73650.t1 | AT3G49150 | 31.441 | 229 | 125 | 10 | 12 | 221 | 9 | 224 | 8.21e-13 | 70.1 |
| MS.gene73650.t1 | AT4G15060 | 25.606 | 371 | 201 | 13 | 1 | 307 | 9 | 368 | 1.27e-12 | 69.3 |
| MS.gene73650.t1 | AT5G56410 | 26.807 | 332 | 181 | 10 | 31 | 300 | 16 | 347 | 1.36e-12 | 69.3 |
| MS.gene73650.t1 | AT3G51530 | 30.736 | 231 | 137 | 10 | 5 | 227 | 19 | 234 | 1.45e-12 | 69.3 |
| MS.gene73650.t1 | AT1G78760 | 26.667 | 285 | 152 | 12 | 16 | 263 | 14 | 278 | 2.98e-12 | 68.2 |
| MS.gene73650.t1 | AT5G02700 | 26.364 | 220 | 140 | 7 | 15 | 228 | 24 | 227 | 3.44e-12 | 68.2 |
| MS.gene73650.t1 | AT4G00320 | 27.149 | 221 | 129 | 6 | 7 | 205 | 3 | 213 | 4.47e-12 | 67.8 |
| MS.gene73650.t1 | AT3G59240 | 31.963 | 219 | 129 | 10 | 18 | 223 | 8 | 219 | 7.28e-12 | 67.0 |
| MS.gene73650.t1 | AT4G13965 | 24.925 | 333 | 187 | 10 | 18 | 301 | 10 | 328 | 7.38e-12 | 67.0 |
| MS.gene73650.t1 | AT1G69630 | 24.213 | 413 | 233 | 12 | 15 | 356 | 15 | 418 | 7.79e-12 | 67.0 |
| MS.gene73650.t1 | AT1G58310 | 30.093 | 216 | 108 | 9 | 18 | 202 | 8 | 211 | 1.13e-11 | 66.6 |
| MS.gene73650.t1 | AT5G22610 | 26.818 | 220 | 136 | 7 | 18 | 223 | 18 | 226 | 1.38e-11 | 66.2 |
| MS.gene73650.t1 | AT5G41830 | 27.602 | 221 | 126 | 7 | 7 | 204 | 3 | 212 | 1.73e-11 | 65.9 |
| MS.gene73650.t1 | AT1G55660 | 26.197 | 355 | 180 | 12 | 18 | 302 | 53 | 395 | 2.09e-11 | 65.9 |
| MS.gene73650.t1 | AT4G22280 | 29.688 | 192 | 121 | 7 | 18 | 204 | 2 | 184 | 2.25e-11 | 65.5 |
| MS.gene73650.t1 | AT5G25850 | 31.016 | 187 | 117 | 6 | 18 | 202 | 20 | 196 | 3.54e-11 | 65.1 |
| MS.gene73650.t1 | AT1G16930 | 27.612 | 268 | 155 | 10 | 18 | 279 | 15 | 249 | 3.66e-11 | 64.7 |
| MS.gene73650.t1 | AT1G16930 | 27.612 | 268 | 155 | 10 | 18 | 279 | 15 | 249 | 3.66e-11 | 64.7 |
| MS.gene73650.t1 | AT1G16930 | 27.612 | 268 | 155 | 10 | 18 | 279 | 15 | 249 | 3.66e-11 | 64.7 |
| MS.gene73650.t1 | AT4G22280 | 29.167 | 192 | 122 | 6 | 18 | 204 | 2 | 184 | 3.70e-11 | 64.3 |
| MS.gene73650.t1 | AT5G54820 | 26.255 | 259 | 158 | 9 | 16 | 245 | 5 | 259 | 4.64e-11 | 64.7 |
| MS.gene73650.t1 | AT3G58940 | 30.583 | 206 | 122 | 7 | 18 | 206 | 2 | 203 | 7.12e-11 | 64.3 |
| MS.gene73650.t1 | AT3G58940 | 30.583 | 206 | 122 | 7 | 18 | 206 | 2 | 203 | 7.12e-11 | 64.3 |
| MS.gene73650.t1 | AT4G13985 | 28.041 | 296 | 171 | 11 | 4 | 262 | 5 | 295 | 8.01e-11 | 63.9 |
| MS.gene73650.t1 | AT5G56560 | 28.326 | 233 | 137 | 12 | 15 | 238 | 2 | 213 | 8.96e-11 | 63.9 |
Find 63 sgRNAs with CRISPR-Local
Find 100 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTCTGGCTGCTTCCTTAAT+TGG | 0.205674 | 4.4:+64974548 | None:intergenic |
| GTTGACAAACCATGCCTATT+TGG | 0.234739 | 4.4:-64973164 | MS.gene73650:CDS |
| ATCATTAAAGTTTATGCATA+TGG | 0.276553 | 4.4:+64973587 | None:intergenic |
| AAGAGTTTGTGTTAGAAATC+TGG | 0.283438 | 4.4:-64974283 | MS.gene73650:CDS |
| CATGTACTTATTCTCCATTC+TGG | 0.283492 | 4.4:-64974395 | MS.gene73650:CDS |
| CTCACCTAATCTACGAGAAT+TGG | 0.327148 | 4.4:-64973526 | MS.gene73650:CDS |
| GGTAGATAAAATACTTGTTC+TGG | 0.331898 | 4.4:+64974532 | None:intergenic |
| TCATTATCAAACACAAGATT+TGG | 0.334429 | 4.4:+64974482 | None:intergenic |
| TAAAAGGTCATTAGAAGTTT+CGG | 0.342074 | 4.4:+64974451 | None:intergenic |
| CATGACTGGCCGATCCAAAT+AGG | 0.352972 | 4.4:+64973150 | None:intergenic |
| ATTTCCAATTCTCGTAGATT+AGG | 0.367571 | 4.4:+64973522 | None:intergenic |
| ATACCACCATCAACATTTCA+AGG | 0.369396 | 4.4:-64974173 | MS.gene73650:CDS |
| GCTTGCTCTTGATAACTAAA+AGG | 0.372194 | 4.4:+64974435 | None:intergenic |
| CGTCTGATACGCAAGGAGAC+TGG | 0.376356 | 4.4:+64974633 | None:intergenic |
| GCATGGTTTGTCAACGGAAC+AGG | 0.398730 | 4.4:+64973172 | None:intergenic |
| AACGCTATAAAATACCTTCA+TGG | 0.398891 | 4.4:-64974247 | MS.gene73650:CDS |
| GAACATTGATGGAGAATTTG+AGG | 0.403009 | 4.4:-64973991 | MS.gene73650:CDS |
| CTACCAACTGGAGGTACAAA+TGG | 0.415469 | 4.4:-64974514 | MS.gene73650:CDS |
| TTGAAGCCTTGAAATGTTGA+TGG | 0.419068 | 4.4:+64974167 | None:intergenic |
| ACATACTTCACTTGCATGAC+TGG | 0.429422 | 4.4:+64973136 | None:intergenic |
| GTGAGAATAGGTGGCATCTC+TGG | 0.446886 | 4.4:-64973115 | MS.gene73650:CDS |
| ATTTAGAATTATTAGAATGC+TGG | 0.466467 | 4.4:-64974199 | MS.gene73650:CDS |
| GTCTGATACGCAAGGAGACT+GGG | 0.470015 | 4.4:+64974634 | None:intergenic |
| ATGTCAATCGTTCAAGCAAA+AGG | 0.471429 | 4.4:+64974072 | None:intergenic |
| TCGTTCAAGCAAAAGGCAGC+TGG | 0.482008 | 4.4:+64974079 | None:intergenic |
| CACGGGGTAGGAAGCTCTAA+TGG | 0.482328 | 4.4:+64973630 | None:intergenic |
| CATAAACTTTAATGATTCAA+AGG | 0.483498 | 4.4:-64973580 | MS.gene73650:CDS |
| TGGTAAACTACTAACTCTAT+CGG | 0.486556 | 4.4:+64974604 | None:intergenic |
| TGAAAGAACTATTGCGGATG+AGG | 0.488648 | 4.4:-64972993 | MS.gene73650:CDS |
| AAACTCTTTAACCTGCCATC+TGG | 0.488698 | 4.4:+64974298 | None:intergenic |
| TAATCTACGAGAATTGGAAA+TGG | 0.514737 | 4.4:-64973520 | MS.gene73650:CDS |
| CAAGTGAAGTATGTGAGAAT+AGG | 0.521251 | 4.4:-64973127 | MS.gene73650:CDS |
| GGTAAACTACTAACTCTATC+GGG | 0.539598 | 4.4:+64974605 | None:intergenic |
| TCCGGTCCGACGTTTAAAGC+AGG | 0.543713 | 4.4:+64973021 | None:intergenic |
| GTAAATAACTTCAGCTCGTG+AGG | 0.552911 | 4.4:+64972966 | None:intergenic |
| GGTCCATTTGTACCTCCAGT+TGG | 0.554074 | 4.4:+64974511 | None:intergenic |
| TCTTTATCTAACCAGATGGC+AGG | 0.558711 | 4.4:-64974309 | MS.gene73650:CDS |
| AATAGTTCTTTCATCAACTC+CGG | 0.570479 | 4.4:+64973003 | None:intergenic |
| ACCTGCTTTAAACGTCGGAC+CGG | 0.576995 | 4.4:-64973022 | MS.gene73650:CDS |
| TTGACATTGATCAACTTCGA+TGG | 0.578034 | 4.4:-64974056 | MS.gene73650:CDS |
| GTGAAGTATGTGAGAATAGG+TGG | 0.582575 | 4.4:-64973124 | MS.gene73650:CDS |
| CAAACCATGCCTATTTGGAT+CGG | 0.584800 | 4.4:-64973159 | MS.gene73650:CDS |
| TGACAAGAAAATAACCATGA+AGG | 0.587372 | 4.4:+64974233 | None:intergenic |
| TCTACGAGAATTGGAAATGG+TGG | 0.588559 | 4.4:-64973517 | MS.gene73650:intron |
| GATAGAGTTAGTAGTTTACC+AGG | 0.591174 | 4.4:-64974602 | MS.gene73650:CDS |
| AAGCTGATGAAGTCTAACTC+AGG | 0.595650 | 4.4:+64973085 | None:intergenic |
| GAGAACTTCGAAAGCAAACA+AGG | 0.598820 | 4.4:-64973915 | MS.gene73650:intron |
| CTTAGATCAACGCACGGGGT+AGG | 0.603539 | 4.4:+64973618 | None:intergenic |
| ATGTGGTTTATTATAAGACC+TGG | 0.606081 | 4.4:+64974584 | None:intergenic |
| TATAACTTAGATCAACGCAC+GGG | 0.607237 | 4.4:+64973613 | None:intergenic |
| GGCTCCTCGTCTGATACGCA+AGG | 0.617251 | 4.4:+64974626 | None:intergenic |
| GTCTCCTTGCGTATCAGACG+AGG | 0.618721 | 4.4:-64974630 | MS.gene73650:CDS |
| CTGAAACCTGCTTTAAACGT+CGG | 0.626977 | 4.4:-64973027 | MS.gene73650:CDS |
| AAACACAAGATTTGGAAGTG+TGG | 0.633110 | 4.4:+64974490 | None:intergenic |
| AAATAGGCATGGTTTGTCAA+CGG | 0.636771 | 4.4:+64973166 | None:intergenic |
| CTGGCCGATCCAAATAGGCA+TGG | 0.648014 | 4.4:+64973155 | None:intergenic |
| ATGTCACTGATATTGATCGA+TGG | 0.655748 | 4.4:-64974334 | MS.gene73650:CDS |
| TTGTATGTAGGTACGATCTG+AGG | 0.659027 | 4.4:-64973200 | MS.gene73650:intron |
| GGACTCTTTATCTAACCAGA+TGG | 0.661378 | 4.4:-64974313 | MS.gene73650:CDS |
| AGTTGATGAAAGAACTATTG+CGG | 0.662211 | 4.4:-64972999 | MS.gene73650:CDS |
| ATATAACTTAGATCAACGCA+CGG | 0.662554 | 4.4:+64973612 | None:intergenic |
| AAGCCTTGAAATGTTGATGG+TGG | 0.685200 | 4.4:+64974170 | None:intergenic |
| ATAACTTAGATCAACGCACG+GGG | 0.741044 | 4.4:+64973614 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATCAATAATATAATTGTGT+TGG | - | chr4.4:64974264-64974283 | MS.gene73650:CDS | 15.0% |
| !! | ATCATTAAAGTTTATGCATA+TGG | + | chr4.4:64974045-64974064 | None:intergenic | 20.0% |
| !! | CATAAACTTTAATGATTCAA+AGG | - | chr4.4:64974049-64974068 | MS.gene73650:CDS | 20.0% |
| !! | TAAATAACAAAAACAGTATG+TGG | + | chr4.4:64974168-64974187 | None:intergenic | 20.0% |
| !!! | ATTATTGATTGAAATTCAAG+TGG | + | chr4.4:64974254-64974273 | None:intergenic | 20.0% |
| !!! | ATTTAGAATTATTAGAATGC+TGG | - | chr4.4:64973430-64973449 | MS.gene73650:intron | 20.0% |
| !!! | GATTAACAACTATTTTTTGA+AGG | - | chr4.4:64973806-64973825 | MS.gene73650:intron | 20.0% |
| !!! | TTATTGATTGAAATTCAAGT+GGG | + | chr4.4:64974253-64974272 | None:intergenic | 20.0% |
| ! | AAAAATAGTTGTTAATCTCC+AGG | + | chr4.4:64973803-64973822 | None:intergenic | 25.0% |
| ! | AAGTTTCATACATATGATTG+TGG | + | chr4.4:64973883-64973902 | None:intergenic | 25.0% |
| ! | ATGTTCAAAAATTGGAGATT+TGG | + | chr4.4:64973624-64973643 | None:intergenic | 25.0% |
| ! | TAAAAGGTCATTAGAAGTTT+CGG | + | chr4.4:64973181-64973200 | None:intergenic | 25.0% |
| ! | TCATTATCAAACACAAGATT+TGG | + | chr4.4:64973150-64973169 | None:intergenic | 25.0% |
| !! | TGGTGCATTTTAAATTTGTA+GGG | + | chr4.4:64973863-64973882 | None:intergenic | 25.0% |
| AACGCTATAAAATACCTTCA+TGG | - | chr4.4:64973382-64973401 | MS.gene73650:intron | 30.0% | |
| AAGAGTTTGTGTTAGAAATC+TGG | - | chr4.4:64973346-64973365 | MS.gene73650:intron | 30.0% | |
| AATAGTTCTTTCATCAACTC+CGG | + | chr4.4:64974629-64974648 | None:intergenic | 30.0% | |
| AGTATTTGTCTAGTAAGTTC+TGG | - | chr4.4:64974365-64974384 | MS.gene73650:CDS | 30.0% | |
| ATATAACTTAGATCAACGCA+CGG | + | chr4.4:64974020-64974039 | None:intergenic | 30.0% | |
| ATGTGGTTTATTATAAGACC+TGG | + | chr4.4:64973048-64973067 | None:intergenic | 30.0% | |
| ATTTCCAATTCTCGTAGATT+AGG | + | chr4.4:64974110-64974129 | None:intergenic | 30.0% | |
| CTCCATCAATGTTCAAAAAT+TGG | + | chr4.4:64973632-64973651 | None:intergenic | 30.0% | |
| GGTAGATAAAATACTTGTTC+TGG | + | chr4.4:64973100-64973119 | None:intergenic | 30.0% | |
| TAATCTACGAGAATTGGAAA+TGG | - | chr4.4:64974109-64974128 | MS.gene73650:CDS | 30.0% | |
| TGACAAGAAAATAACCATGA+AGG | + | chr4.4:64973399-64973418 | None:intergenic | 30.0% | |
| TGGTAAACTACTAACTCTAT+CGG | + | chr4.4:64973028-64973047 | None:intergenic | 30.0% | |
| ! | ACTCATATAAGCTTGATTTG+TGG | - | chr4.4:64974140-64974159 | MS.gene73650:CDS | 30.0% |
| ! | AGGCACTTTGAAAAGAAAAA+TGG | + | chr4.4:64974227-64974246 | None:intergenic | 30.0% |
| ! | CAAGTATTTTATCTACCAAC+TGG | - | chr4.4:64973103-64973122 | MS.gene73650:CDS | 30.0% |
| ! | CTCCAATTTTTGAACATTGA+TGG | - | chr4.4:64973627-64973646 | MS.gene73650:CDS | 30.0% |
| ! | GTATTAGAGATTGTGTTGTT+TGG | - | chr4.4:64974294-64974313 | MS.gene73650:CDS | 30.0% |
| ! | GTGGTGCATTTTAAATTTGT+AGG | + | chr4.4:64973864-64973883 | None:intergenic | 30.0% |
| !! | AGTTGATGAAAGAACTATTG+CGG | - | chr4.4:64974630-64974649 | MS.gene73650:CDS | 30.0% |
| !! | TCTCTCATTTTTGCCAATTA+AGG | - | chr4.4:64973068-64973087 | MS.gene73650:CDS | 30.0% |
| !!! | ATGAAGGTATTTTATAGCGT+TGG | + | chr4.4:64973383-64973402 | None:intergenic | 30.0% |
| AAACACAAGATTTGGAAGTG+TGG | + | chr4.4:64973142-64973161 | None:intergenic | 35.0% | |
| ATACCACCATCAACATTTCA+AGG | - | chr4.4:64973456-64973475 | MS.gene73650:intron | 35.0% | |
| ATGTCAATCGTTCAAGCAAA+AGG | + | chr4.4:64973560-64973579 | None:intergenic | 35.0% | |
| ATGTCACTGATATTGATCGA+TGG | - | chr4.4:64973295-64973314 | MS.gene73650:intron | 35.0% | |
| CAAGTGAAGTATGTGAGAAT+AGG | - | chr4.4:64974502-64974521 | MS.gene73650:CDS | 35.0% | |
| CATGTACTTATTCTCCATTC+TGG | - | chr4.4:64973234-64973253 | MS.gene73650:intron | 35.0% | |
| GAAACAAGACAGAAAGTGAA+TGG | + | chr4.4:64973950-64973969 | None:intergenic | 35.0% | |
| GAACATTGATGGAGAATTTG+AGG | - | chr4.4:64973638-64973657 | MS.gene73650:CDS | 35.0% | |
| GATAGAGTTAGTAGTTTACC+AGG | - | chr4.4:64973027-64973046 | MS.gene73650:CDS | 35.0% | |
| GGTAAACTACTAACTCTATC+GGG | + | chr4.4:64973027-64973046 | None:intergenic | 35.0% | |
| TATAACTTAGATCAACGCAC+GGG | + | chr4.4:64974019-64974038 | None:intergenic | 35.0% | |
| TCAAAAAGTTCAAGCTCTCT+CGG | - | chr4.4:64973262-64973281 | MS.gene73650:intron | 35.0% | |
| TGTGTGTTACGATTGTATGT+AGG | - | chr4.4:64974417-64974436 | MS.gene73650:CDS | 35.0% | |
| TTGAAGCCTTGAAATGTTGA+TGG | + | chr4.4:64973465-64973484 | None:intergenic | 35.0% | |
| TTGACATTGATCAACTTCGA+TGG | - | chr4.4:64973573-64973592 | MS.gene73650:CDS | 35.0% | |
| TTGGCAAAAATGAGAGAATG+TGG | + | chr4.4:64973065-64973084 | None:intergenic | 35.0% | |
| ! | AAATAGGCATGGTTTGTCAA+CGG | + | chr4.4:64974466-64974485 | None:intergenic | 35.0% |
| ! | GAGAGCTTGAACTTTTTGAT+TGG | + | chr4.4:64973261-64973280 | None:intergenic | 35.0% |
| ! | GCTTGCTCTTGATAACTAAA+AGG | + | chr4.4:64973197-64973216 | None:intergenic | 35.0% |
| ! | GTATTTTATCTACCAACTGG+AGG | - | chr4.4:64973106-64973125 | MS.gene73650:CDS | 35.0% |
| !! | ACTTTTTGATTGGTCCAGAA+TGG | + | chr4.4:64973251-64973270 | None:intergenic | 35.0% |
| !! | ATTGAAATTCAAGTGGGTTG+AGG | + | chr4.4:64974247-64974266 | None:intergenic | 35.0% |
| !!! | TGCTCCAGTATTTGGTTTTA+GGG | - | chr4.4:64973970-64973989 | MS.gene73650:CDS | 35.0% |
| AAACTCTTTAACCTGCCATC+TGG | + | chr4.4:64973334-64973353 | None:intergenic | 40.0% | |
| AAGCTGATGAAGTCTAACTC+AGG | + | chr4.4:64974547-64974566 | None:intergenic | 40.0% | |
| ACATACTTCACTTGCATGAC+TGG | + | chr4.4:64974496-64974515 | None:intergenic | 40.0% | |
| ATAACTTAGATCAACGCACG+GGG | + | chr4.4:64974018-64974037 | None:intergenic | 40.0% | |
| CAAAAAGTTCAAGCTCTCTC+GGG | - | chr4.4:64973263-64973282 | MS.gene73650:intron | 40.0% | |
| CAAACCATGCCTATTTGGAT+CGG | - | chr4.4:64974470-64974489 | MS.gene73650:CDS | 40.0% | |
| CAACCCCTAAAACCAAATAC+TGG | + | chr4.4:64973977-64973996 | None:intergenic | 40.0% | |
| CTCACCTAATCTACGAGAAT+TGG | - | chr4.4:64974103-64974122 | MS.gene73650:CDS | 40.0% | |
| GAGAACTTCGAAAGCAAACA+AGG | - | chr4.4:64973714-64973733 | MS.gene73650:intron | 40.0% | |
| GGACTCTTTATCTAACCAGA+TGG | - | chr4.4:64973316-64973335 | MS.gene73650:intron | 40.0% | |
| GTGAAGTATGTGAGAATAGG+TGG | - | chr4.4:64974505-64974524 | MS.gene73650:CDS | 40.0% | |
| GTTGACAAACCATGCCTATT+TGG | - | chr4.4:64974465-64974484 | MS.gene73650:CDS | 40.0% | |
| TCTACGAGAATTGGAAATGG+TGG | - | chr4.4:64974112-64974131 | MS.gene73650:CDS | 40.0% | |
| TCTTTATCTAACCAGATGGC+AGG | - | chr4.4:64973320-64973339 | MS.gene73650:intron | 40.0% | |
| TGAAAGAACTATTGCGGATG+AGG | - | chr4.4:64974636-64974655 | MS.gene73650:CDS | 40.0% | |
| TTGTATGTAGGTACGATCTG+AGG | - | chr4.4:64974429-64974448 | MS.gene73650:CDS | 40.0% | |
| ! | AAGCCTTGAAATGTTGATGG+TGG | + | chr4.4:64973462-64973481 | None:intergenic | 40.0% |
| ! | CTGAAACCTGCTTTAAACGT+CGG | - | chr4.4:64974602-64974621 | MS.gene73650:CDS | 40.0% |
| !! | CTTGTTTCTGCTCCAGTATT+TGG | - | chr4.4:64973962-64973981 | MS.gene73650:CDS | 40.0% |
| !! | TCAGTCATCTTTTCTAGCAC+TGG | + | chr4.4:64974586-64974605 | None:intergenic | 40.0% |
| !!! | CTGCTCCAGTATTTGGTTTT+AGG | - | chr4.4:64973969-64973988 | MS.gene73650:CDS | 40.0% |
| !!! | GCTCCAGTATTTGGTTTTAG+GGG | - | chr4.4:64973971-64973990 | MS.gene73650:CDS | 40.0% |
| !!! | GGTATTTTATAGCGTTGGTC+TGG | + | chr4.4:64973378-64973397 | None:intergenic | 40.0% |
| GCATGAACGCTCTAGCAATT+TGG | - | chr4.4:64973743-64973762 | MS.gene73650:intron | 45.0% | |
| ! | CTACCAACTGGAGGTACAAA+TGG | - | chr4.4:64973115-64973134 | MS.gene73650:CDS | 45.0% |
| ! | GTTCTGGCTGCTTCCTTAAT+TGG | + | chr4.4:64973084-64973103 | None:intergenic | 45.0% |
| ATCTCCAGGCTGCGTATATG+AGG | + | chr4.4:64973789-64973808 | None:intergenic | 50.0% | |
| GGTCCATTTGTACCTCCAGT+TGG | + | chr4.4:64973121-64973140 | None:intergenic | 50.0% | |
| GTCTGATACGCAAGGAGACT+GGG | + | chr4.4:64972998-64973017 | None:intergenic | 50.0% | |
| GTGAGAATAGGTGGCATCTC+TGG | - | chr4.4:64974514-64974533 | MS.gene73650:CDS | 50.0% | |
| TCGTTCAAGCAAAAGGCAGC+TGG | + | chr4.4:64973553-64973572 | None:intergenic | 50.0% | |
| TCTACCTCATATACGCAGCC+TGG | - | chr4.4:64973782-64973801 | MS.gene73650:intron | 50.0% | |
| ! | ACCTGCTTTAAACGTCGGAC+CGG | - | chr4.4:64974607-64974626 | MS.gene73650:CDS | 50.0% |
| ! | CATGACTGGCCGATCCAAAT+AGG | + | chr4.4:64974482-64974501 | None:intergenic | 50.0% |
| ! | GCATGGTTTGTCAACGGAAC+AGG | + | chr4.4:64974460-64974479 | None:intergenic | 50.0% |
| CGTCTGATACGCAAGGAGAC+TGG | + | chr4.4:64972999-64973018 | None:intergenic | 55.0% | |
| CTGGCCGATCCAAATAGGCA+TGG | + | chr4.4:64974477-64974496 | None:intergenic | 55.0% | |
| CTTAGATCAACGCACGGGGT+AGG | + | chr4.4:64974014-64974033 | None:intergenic | 55.0% | |
| GTCTCCTTGCGTATCAGACG+AGG | - | chr4.4:64972999-64973018 | MS.gene73650:CDS | 55.0% | |
| ! | CACGGGGTAGGAAGCTCTAA+TGG | + | chr4.4:64974002-64974021 | None:intergenic | 55.0% |
| ! | TCCGGTCCGACGTTTAAAGC+AGG | + | chr4.4:64974611-64974630 | None:intergenic | 55.0% |
| GGCTCCTCGTCTGATACGCA+AGG | + | chr4.4:64973006-64973025 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 64972976 | 64974675 | 64972976 | ID=MS.gene73650 |
| chr4.4 | mRNA | 64972976 | 64974675 | 64972976 | ID=MS.gene73650.t1;Parent=MS.gene73650 |
| chr4.4 | exon | 64973916 | 64974675 | 64973916 | ID=MS.gene73650.t1.exon1;Parent=MS.gene73650.t1 |
| chr4.4 | CDS | 64973916 | 64974675 | 64973916 | ID=cds.MS.gene73650.t1;Parent=MS.gene73650.t1 |
| chr4.4 | exon | 64973518 | 64973660 | 64973518 | ID=MS.gene73650.t1.exon2;Parent=MS.gene73650.t1 |
| chr4.4 | CDS | 64973518 | 64973660 | 64973518 | ID=cds.MS.gene73650.t1;Parent=MS.gene73650.t1 |
| chr4.4 | exon | 64972976 | 64973212 | 64972976 | ID=MS.gene73650.t1.exon3;Parent=MS.gene73650.t1 |
| chr4.4 | CDS | 64972976 | 64973212 | 64972976 | ID=cds.MS.gene73650.t1;Parent=MS.gene73650.t1 |
| Gene Sequence |
| Protein sequence |
