AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene060482


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene060482.t1 MTR_8g024340 95.779 616 16 1 1 606 1 616 0.0 1223
MS.gene060482.t1 MTR_1g078000 72.097 577 147 3 41 606 35 608 0.0 845
MS.gene060482.t1 MTR_6g012380 40.864 509 261 11 90 580 267 753 6.55e-114 357
MS.gene060482.t1 MTR_3g091570 39.434 530 269 14 83 578 134 645 2.76e-112 350
MS.gene060482.t1 MTR_3g091570 37.860 486 250 13 127 578 1 468 2.80e-96 303
MS.gene060482.t1 MTR_4g094595 29.520 542 276 20 89 579 490 976 3.35e-52 193
MS.gene060482.t1 MTR_2g023320 29.623 530 245 19 90 577 658 1101 1.09e-47 180
MS.gene060482.t1 MTR_2g023320 29.038 520 261 16 90 577 474 917 1.58e-47 179
MS.gene060482.t1 MTR_5g030600 23.438 512 318 19 89 569 190 658 1.78e-20 96.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene060482.t1 AT1G32900 69.256 618 170 5 1 606 1 610 0.0 837
MS.gene060482.t1 AT3G01180 42.633 509 252 11 90 580 301 787 2.41e-116 365
MS.gene060482.t1 AT5G24300 39.089 527 274 14 81 578 133 641 1.19e-109 343
MS.gene060482.t1 AT5G24300 39.089 527 274 14 81 578 133 641 1.19e-109 343
MS.gene060482.t1 AT4G18240 29.815 540 275 18 88 577 540 1025 1.89e-53 197
MS.gene060482.t1 AT1G11720 28.053 524 266 15 90 580 594 1039 2.30e-50 188
MS.gene060482.t1 AT1G11720 28.053 524 266 15 90 580 646 1091 2.54e-50 188

Find 134 sgRNAs with CRISPR-Local

Find 280 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAACATCCTCCTTAATAAAT+TGG 0.148032 8.1:+75975449 None:intergenic
TCCAATTCCACTCCTTTATC+TGG 0.155027 8.1:+75975993 None:intergenic
AGCCATTCCCCAATTTATTA+AGG 0.277974 8.1:-75975458 MS.gene060482:CDS
AGTGGAATCCATCCACTAAA+AGG 0.284655 8.1:-75975914 MS.gene060482:CDS
CTTCGCCGAACTGGTGTTAC+TGG 0.300119 8.1:-75975963 MS.gene060482:CDS
AACATCCTCCTTAATAAATT+GGG 0.300262 8.1:+75975450 None:intergenic
GGAGGAAGTGCTGCTAAGTT+TGG 0.312861 8.1:-75974113 MS.gene060482:CDS
CTGCTAAGTTTGGGAGTTCC+TGG 0.315078 8.1:-75974103 MS.gene060482:CDS
AACTCATTCGACTTCATAGA+TGG 0.320060 8.1:-75976216 MS.gene060482:CDS
ACAAAGGCCCTTGCAGTCTA+TGG 0.324992 8.1:-75974628 MS.gene060482:CDS
TGGAGCAAAACTGGTGGTTT+AGG 0.348494 8.1:-75977962 MS.gene060482:CDS
ACCAGCCAAATGGCATATTT+AGG 0.351605 8.1:-75976463 MS.gene060482:CDS
TTTATCACTCTCTAGGCTAA+TGG 0.363828 8.1:-75977492 MS.gene060482:intron
TCTGAGTCCATTATGTGTAT+TGG 0.365017 8.1:+75978141 None:intergenic
CCAAGCAGAAGTTGGATTGC+CGG 0.369816 8.1:-75975554 MS.gene060482:CDS
GGTAGACTTGAAGAGCAAAA+AGG 0.369948 8.1:-75975499 MS.gene060482:CDS
GCATGGCTCAAGATCTTTCA+TGG 0.373044 8.1:-75974573 MS.gene060482:CDS
ACTAGTTCTTGAGCATAGTA+TGG 0.376634 8.1:+75976023 None:intergenic
ATTCCTCTCATTGCTTTCAT+TGG 0.382733 8.1:-75975520 MS.gene060482:CDS
CCCAGATAAAGGAGTGGAAT+TGG 0.385440 8.1:-75975994 MS.gene060482:CDS
TTGATCATTTCTGCAAAAGT+TGG 0.386157 8.1:+75974601 None:intergenic
AGAAAAGCCAATACACATAA+TGG 0.386744 8.1:-75978148 MS.gene060482:CDS
GGTGGTTTAGGAGATGTTCT+AGG 0.388108 8.1:-75977950 MS.gene060482:CDS
ATTTCTTCTCCATCAATTCC+AGG 0.392626 8.1:+75974073 None:intergenic
TATGCCATTTCTTAGGGAAC+AGG 0.404468 8.1:-75975322 MS.gene060482:intron
GTACCAATTGTTGCCTCAAC+AGG 0.406492 8.1:-75974870 MS.gene060482:CDS
GCATTCCTAAATATGCCATT+TGG 0.407931 8.1:+75976458 None:intergenic
CCAATTCCACTCCTTTATCT+GGG 0.409765 8.1:+75975994 None:intergenic
GCAACTCCTCTAGCCTTGTC+AGG 0.409835 8.1:+75975253 None:intergenic
GGCAGTGAACCTGGAATTGA+TGG 0.411509 8.1:-75974082 MS.gene060482:CDS
TTAATCTTAACAGGCAGCTC+TGG 0.415269 8.1:-75976693 MS.gene060482:intron
GGAGTTCCTGGCAGTGAACC+TGG 0.416485 8.1:-75974091 MS.gene060482:CDS
CTAGTGTCAGGCCCAGATAA+AGG 0.418565 8.1:-75976005 MS.gene060482:CDS
CCACAAATTATAATACCTTT+CGG 0.419141 8.1:+75978022 None:intergenic
CTTGGAGTGCTTCTTTCAGA+AGG 0.419569 8.1:+75975572 None:intergenic
GGCATGAATTTGATCTTTGT+TGG 0.419673 8.1:-75978001 MS.gene060482:CDS
CCGAAAGGTATTATAATTTG+TGG 0.422942 8.1:-75978022 MS.gene060482:CDS
TGCCTCAACAGGTGGATTAG+TGG 0.426815 8.1:-75974859 MS.gene060482:CDS
TATCCCACGCATCTTTGTAT+TGG 0.430966 8.1:+75977436 None:intergenic
TCACCCTATATTTCTTGAAA+AGG 0.432618 8.1:-75977202 MS.gene060482:intron
TTCTTTCATTGCTTTAAAAG+AGG 0.435407 8.1:-75977246 MS.gene060482:CDS
GGTGTTACTGGTATTGTAAA+TGG 0.437797 8.1:-75975951 MS.gene060482:CDS
AGTAAGCTTACTGCTAATAC+TGG 0.437855 8.1:+75977917 None:intergenic
CCACAAGGCTCAAATCTACT+AGG 0.441652 8.1:+75975172 None:intergenic
AAATATTTCTCAGGACCATA+TGG 0.444026 8.1:-75976638 MS.gene060482:intron
CGCTGTGGATCCGGCTGATG+TGG 0.450888 8.1:-75974671 MS.gene060482:CDS
CCACCTGTTGAGGCAACAAT+TGG 0.451085 8.1:+75974867 None:intergenic
TTAGCACACATGATAATTGC+AGG 0.452499 8.1:-75975214 MS.gene060482:CDS
GTTGGTCCATGGAGCAAAAC+TGG 0.452504 8.1:-75977971 MS.gene060482:CDS
TGCAATTATCATGTGTGCTA+AGG 0.453551 8.1:+75975216 None:intergenic
GAGGAAGTGCTGCTAAGTTT+GGG 0.458467 8.1:-75974112 MS.gene060482:CDS
TTAGTGTGACGCTGTGGATC+CGG 0.465682 8.1:-75974680 MS.gene060482:intron
TATTATTACTTCAACATTGA+AGG 0.465906 8.1:+75974797 None:intergenic
ACTTCCTCCCACTTCTTAGC+AGG 0.470539 8.1:+75974127 None:intergenic
TTTCAAGTAGCATGAGATAA+GGG 0.470650 8.1:+75976493 None:intergenic
CCAAGGCAGATTTGCATTCG+CGG 0.473556 8.1:-75976274 MS.gene060482:CDS
GCAGTGAAATCAAGAAGAAA+AGG 0.478581 8.1:-75978067 MS.gene060482:CDS
CTCCTTAATAAATTGGGGAA+TGG 0.479356 8.1:+75975456 None:intergenic
GACAACATTCTTCGCCGAAC+TGG 0.480449 8.1:-75975972 MS.gene060482:CDS
TGTTTATTACAGGTAAAAGT+AGG 0.480821 8.1:-75977291 MS.gene060482:intron
ACAGTCAAAGAAGGTTTCAC+TGG 0.487245 8.1:-75974834 MS.gene060482:CDS
AAAATCAACTGGATGAAAGC+TGG 0.487870 8.1:-75976080 MS.gene060482:CDS
TAGAACTCCAATTAAAATGA+AGG 0.490575 8.1:-75978089 MS.gene060482:CDS
ACGAGCAATAAATATTTCTC+AGG 0.491007 8.1:-75976647 MS.gene060482:CDS
ATCTTTGTTGGAACTGAGGT+TGG 0.492697 8.1:-75977989 MS.gene060482:CDS
TCAATTCCAGGTTCACTGCC+AGG 0.495114 8.1:+75974085 None:intergenic
AGGTTTCACTGGATTTCAGA+TGG 0.496834 8.1:-75974823 MS.gene060482:CDS
AGGTATGTTAAACCAGTTGT+TGG 0.500872 8.1:-75976107 MS.gene060482:CDS
TGGTAATCATCTCCCGTGGC+AGG 0.502745 8.1:+75977067 None:intergenic
TAAAACGTAGTTGATTGTCT+TGG 0.510188 8.1:+75977047 None:intergenic
TTGGAGTGCTTCTTTCAGAA+GGG 0.511966 8.1:+75975573 None:intergenic
TCCTAAATATGCCATTTGGC+TGG 0.513729 8.1:+75976462 None:intergenic
CCTAGTAGATTTGAGCCTTG+TGG 0.515224 8.1:-75975172 MS.gene060482:CDS
CCGGCAATCCAACTTCTGCT+TGG 0.516075 8.1:+75975554 None:intergenic
GTGGAATCCATCCACTAAAA+GGG 0.516207 8.1:-75975913 MS.gene060482:intron
AAATCTATGTACCAGCCAAA+TGG 0.518875 8.1:-75976473 MS.gene060482:CDS
GCAATTATCATGTGTGCTAA+GGG 0.520362 8.1:+75975217 None:intergenic
TGGAGAAGAAATTGCTCCAC+AGG 0.521835 8.1:-75974062 MS.gene060482:CDS
GAAGCACTCCAAGCAGAAGT+TGG 0.523874 8.1:-75975562 MS.gene060482:CDS
ATTTCAAGTAGCATGAGATA+AGG 0.525167 8.1:+75976492 None:intergenic
GCTATTGCATCCACATCAGC+CGG 0.525934 8.1:+75974661 None:intergenic
TTGGAACTGAGGTTGGTCCA+TGG 0.530234 8.1:-75977982 MS.gene060482:CDS
AGAAATTGCTCCACAGGCAA+AGG 0.537424 8.1:-75974056 MS.gene060482:CDS
CCGCGAATGCAAATCTGCCT+TGG 0.538259 8.1:+75976274 None:intergenic
CTCATAGAACCAAGTCTCAT+CGG 0.538517 8.1:+75978169 None:intergenic
CAATACCAGTAACACCAGTT+CGG 0.539892 8.1:+75975958 None:intergenic
GGCAGCTCTGGAAGCAGCAA+GGG 0.542199 8.1:-75976681 MS.gene060482:CDS
TATGCTCAAGAACTAGTGTC+AGG 0.557035 8.1:-75976017 MS.gene060482:CDS
AAAATTTATGGACCTGCCAC+GGG 0.558373 8.1:-75977079 MS.gene060482:CDS
TTAGTGGACACAGTCAAAGA+AGG 0.561216 8.1:-75974843 MS.gene060482:CDS
CCAATTGTTGCCTCAACAGG+TGG 0.561384 8.1:-75974867 MS.gene060482:CDS
GGTTTCACTGGATTTCAGAT+GGG 0.561885 8.1:-75974822 MS.gene060482:CDS
CATTCCCCAATTTATTAAGG+AGG 0.565255 8.1:-75975455 MS.gene060482:CDS
GGCTCAAGATCTTTCATGGA+AGG 0.575124 8.1:-75974569 MS.gene060482:intron
AAAACAGCACCGATGAGACT+TGG 0.575958 8.1:-75978178 MS.gene060482:CDS
TTGGAGTTCCATAGACTGCA+AGG 0.578650 8.1:+75974620 None:intergenic
ATTAGGGACCTGCTAAGAAG+TGG 0.580093 8.1:-75974135 MS.gene060482:intron
CGTCGCTAATGATTGGCACA+CGG 0.584845 8.1:-75976516 MS.gene060482:CDS
GGATACAAGTGTAACAATTG+AGG 0.586203 8.1:-75977418 MS.gene060482:intron
TACTGGTATTGTAAATGGCA+TGG 0.587387 8.1:-75975946 MS.gene060482:CDS
AGAAAGAATGTTATGCCGAA+AGG 0.592828 8.1:-75978037 MS.gene060482:CDS
CAGCTACAAGCTATGCGCTA+CGG 0.593914 8.1:-75975142 MS.gene060482:CDS
AAGCTTACTGCTAATACTGG+TGG 0.598496 8.1:+75977920 None:intergenic
TGCCTTGGTATGCAATGTTG+TGG 0.598925 8.1:+75976289 None:intergenic
AGGCAGCTCTGGAAGCAGCA+AGG 0.600304 8.1:-75976682 MS.gene060482:CDS
ACATCCTCCTTAATAAATTG+GGG 0.602752 8.1:+75975451 None:intergenic
TCGTCTACTCAGGTATTGGA+AGG 0.602861 8.1:-75975601 MS.gene060482:intron
ACTCATTCGACTTCATAGAT+GGG 0.605247 8.1:-75976215 MS.gene060482:intron
TTTGATCTTTGTTGGAACTG+AGG 0.607065 8.1:-75977993 MS.gene060482:CDS
GTTATAAAACCTGACAGAAG+AGG 0.608463 8.1:+75977023 None:intergenic
TTGGTCATAACGTGGAGCGA+TGG 0.612220 8.1:+75977455 None:intergenic
TTTACTTTAGTGTGACGCTG+TGG 0.621041 8.1:-75974686 MS.gene060482:intron
ATGACCAATACAAAGATGCG+TGG 0.624316 8.1:-75977440 MS.gene060482:CDS
TTAGGGACCTGCTAAGAAGT+GGG 0.625550 8.1:-75974134 MS.gene060482:intron
GTCCACTAATCCACCTGTTG+AGG 0.626982 8.1:+75974857 None:intergenic
AGATAGTTTGTACATTGACA+TGG 0.634706 8.1:+75978212 None:intergenic
AGAAATGATCAAGAATTGCA+TGG 0.636503 8.1:-75974590 MS.gene060482:CDS
ATGGCATGGATGTTCAAGAG+TGG 0.637982 8.1:-75975932 MS.gene060482:CDS
TCATATCCTGACAAGGCTAG+AGG 0.641716 8.1:-75975259 MS.gene060482:CDS
TGACCAATACAAAGATGCGT+GGG 0.645410 8.1:-75977439 MS.gene060482:CDS
TGATTGAATTTGAAGGTTTG+GGG 0.645543 8.1:-75977115 MS.gene060482:intron
TGAAATATCATATCCTGACA+AGG 0.646436 8.1:-75975266 MS.gene060482:CDS
GGTTTAGGAGATGTTCTAGG+AGG 0.652378 8.1:-75977947 MS.gene060482:CDS
TGGAGTTCCATAGACTGCAA+GGG 0.653724 8.1:+75974621 None:intergenic
CTACCAATGAAAGCAATGAG+AGG 0.658131 8.1:+75975517 None:intergenic
GTCTTGGTAATCATCTCCCG+TGG 0.663295 8.1:+75977063 None:intergenic
TCTTTGTATTGGTCATAACG+TGG 0.669620 8.1:+75977447 None:intergenic
GTCAGGCCCAGATAAAGGAG+TGG 0.669932 8.1:-75976000 MS.gene060482:CDS
TGTAGCTGAATGAGACCACA+AGG 0.671420 8.1:+75975157 None:intergenic
GGTCCATGGAGCAAAACTGG+TGG 0.674393 8.1:-75977968 MS.gene060482:CDS
AATAGCAAAGACTGTCACAA+AGG 0.677740 8.1:-75974644 MS.gene060482:CDS
ATCCACAACATTGCATACCA+AGG 0.683894 8.1:-75976291 MS.gene060482:CDS
ATGGACTAACAGTTAAAACC+CGG 0.694472 8.1:+75976042 None:intergenic
GGGACCTGCTAAGAAGTGGG+AGG 0.697968 8.1:-75974131 MS.gene060482:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTAAGAAACAATAAGATAA+TGG + chr8.1:75977592-75977611 None:intergenic 15.0%
!! AAAACTGGAACAAAAATTTA+TGG - chr8.1:75975210-75975229 MS.gene060482:CDS 20.0%
!! AAAATGACAAAGGAAAAATT+AGG + chr8.1:75975576-75975595 None:intergenic 20.0%
!! ATAGTCATAAATGAAATTCT+TGG - chr8.1:75975694-75975713 MS.gene060482:intron 20.0%
!! TACAAAAAACAACCTAATAA+TGG + chr8.1:75975991-75976010 None:intergenic 20.0%
!! TATTATTACTTCAACATTGA+AGG + chr8.1:75977507-75977526 None:intergenic 20.0%
!! TTAATGATGATTGAATTTGA+AGG - chr8.1:75975179-75975198 MS.gene060482:CDS 20.0%
!!! TGAATTTTGTTTTGGAATTA+GGG - chr8.1:75978150-75978169 MS.gene060482:CDS 20.0%
! AAATGTGAGACAAATTATTG+AGG + chr8.1:75977397-75977416 None:intergenic 25.0%
! AAATTATTGAGGAAGTCTTA+TGG + chr8.1:75977386-75977405 None:intergenic 25.0%
! AACATCCTCCTTAATAAATT+GGG + chr8.1:75976854-75976873 None:intergenic 25.0%
! AGTATATAGCTCAAAAGAAA+AGG + chr8.1:75975138-75975157 None:intergenic 25.0%
! ATCCTTTCTTACTTCATTAA+AGG - chr8.1:75976931-75976950 MS.gene060482:intron 25.0%
! ATGAAATTCTTGGAAACAAA+TGG - chr8.1:75975704-75975723 MS.gene060482:intron 25.0%
! ATGATTGAATTTGAAGGTTT+GGG - chr8.1:75975185-75975204 MS.gene060482:CDS 25.0%
! CATCATTATCATACTTACTA+GGG + chr8.1:75976887-75976906 None:intergenic 25.0%
! CCACAAATTATAATACCTTT+CGG + chr8.1:75974282-75974301 None:intergenic 25.0%
! TAGAACTCCAATTAAAATGA+AGG - chr8.1:75974212-75974231 MS.gene060482:intron 25.0%
! TATTGCAATCTGTTTATTAC+AGG - chr8.1:75975000-75975019 MS.gene060482:intron 25.0%
! TCTACGTTGTAAATTATGAT+TGG - chr8.1:75974531-75974550 MS.gene060482:intron 25.0%
! TGTTTATTACAGGTAAAAGT+AGG - chr8.1:75975010-75975029 MS.gene060482:intron 25.0%
! TTATGTTGTTCTAATCTTGT+AGG - chr8.1:75976174-75976193 MS.gene060482:intron 25.0%
! TTCCTTTAATGAAGTAAGAA+AGG + chr8.1:75976936-75976955 None:intergenic 25.0%
!! AATATGTTATGCCATTTCTT+AGG - chr8.1:75976972-75976991 MS.gene060482:intron 25.0%
!! AATGAGTTTTTAAATTGGTC+GGG + chr8.1:75976073-75976092 None:intergenic 25.0%
!! ACAATGAAAACATTTTGTCA+AGG + chr8.1:75974919-75974938 None:intergenic 25.0%
!! AGTCGAATGAGTTTTTAAAT+TGG + chr8.1:75976078-75976097 None:intergenic 25.0%
!! ATATGTTATGCCATTTCTTA+GGG - chr8.1:75976973-75976992 MS.gene060482:intron 25.0%
!! GAATGAGTTTTTAAATTGGT+CGG + chr8.1:75976074-75976093 None:intergenic 25.0%
!! GTAGCTTTTTATATTGTCTA+AGG - chr8.1:75975345-75975364 MS.gene060482:intron 25.0%
!! TTTAGTGCATTTTAGATTGA+CGG - chr8.1:75977771-75977790 MS.gene060482:intron 25.0%
!!! CTGAATTTTGTTTTGGAATT+AGG - chr8.1:75978149-75978168 MS.gene060482:CDS 25.0%
!!! TCACATTTTTTACTTCAACT+AGG - chr8.1:75977409-75977428 MS.gene060482:intron 25.0%
!!! TCACCTTTTCAAGAAATATA+GGG + chr8.1:75975105-75975124 None:intergenic 25.0%
!!! TGAGTAACTGAATTTTGTTT+TGG - chr8.1:75978142-75978161 MS.gene060482:CDS 25.0%
!!! TGTATCCTAATTTTTTTCGT+AGG + chr8.1:75977991-75978010 None:intergenic 25.0%
!!! TTCTTTCATTGCTTTAAAAG+AGG - chr8.1:75975055-75975074 MS.gene060482:intron 25.0%
AAAACTACTAAGTGCATGTT+TGG + chr8.1:75977900-75977919 None:intergenic 30.0%
AAATATTTCTCAGGACCATA+TGG - chr8.1:75975663-75975682 MS.gene060482:intron 30.0%
AAATTCAGTTACTCAGTTGA+TGG + chr8.1:75978137-75978156 None:intergenic 30.0%
AATTCAGTTACTCAGTTGAT+GGG + chr8.1:75978136-75978155 None:intergenic 30.0%
ACATCCTCCTTAATAAATTG+GGG + chr8.1:75976853-75976872 None:intergenic 30.0%
ACGAGCAATAAATATTTCTC+AGG - chr8.1:75975654-75975673 MS.gene060482:intron 30.0%
AGAAAAGCCAATACACATAA+TGG - chr8.1:75974153-75974172 MS.gene060482:intron 30.0%
AGAAATGATCAAGAATTGCA+TGG - chr8.1:75977711-75977730 MS.gene060482:intron 30.0%
AGACTGTGATTTACTGTTAA+AGG + chr8.1:75975457-75975476 None:intergenic 30.0%
AGTTCTTCAAACTTTCTTTC+TGG - chr8.1:75975959-75975978 MS.gene060482:CDS 30.0%
ATATTTAGGAATGCCAAAGT+AGG - chr8.1:75975852-75975871 MS.gene060482:intron 30.0%
CAAACAACATTGTAACCAAA+GGG + chr8.1:75975309-75975328 None:intergenic 30.0%
CATGACAAGTTTATCCAAAT+AGG - chr8.1:75978098-75978117 MS.gene060482:CDS 30.0%
CCATCATTATCATACTTACT+AGG + chr8.1:75976888-75976907 None:intergenic 30.0%
CCTGTTAAGATTAATTCCAA+GGG + chr8.1:75975602-75975621 None:intergenic 30.0%
CTATTTGGATAAACTTGTCA+TGG + chr8.1:75978100-75978119 None:intergenic 30.0%
CTGTTAAGATTAATTCCAAG+GGG + chr8.1:75975601-75975620 None:intergenic 30.0%
GAACATCCTCCTTAATAAAT+TGG + chr8.1:75976855-75976874 None:intergenic 30.0%
GACACAATTGCATTAAATGA+AGG + chr8.1:75977541-75977560 None:intergenic 30.0%
GATAGCCTACGAAAAAAATT+AGG - chr8.1:75977983-75978002 MS.gene060482:CDS 30.0%
GATGATTGAATTTGAAGGTT+TGG - chr8.1:75975184-75975203 MS.gene060482:CDS 30.0%
TAAAACGTAGTTGATTGTCT+TGG + chr8.1:75975257-75975276 None:intergenic 30.0%
TAACTATAGCATAGCACAAT+TGG + chr8.1:75974971-75974990 None:intergenic 30.0%
TCACCCTATATTTCTTGAAA+AGG - chr8.1:75975099-75975118 MS.gene060482:intron 30.0%
TCCAACACATTAGTTACAAT+CGG + chr8.1:75974698-75974717 None:intergenic 30.0%
TCTCTAATTTATCACTCTCT+AGG - chr8.1:75974802-75974821 MS.gene060482:intron 30.0%
TGAAATATCATATCCTGACA+AGG - chr8.1:75977035-75977054 MS.gene060482:CDS 30.0%
TGACTATAGTTCATACCATA+TGG + chr8.1:75975681-75975700 None:intergenic 30.0%
TGATTGAATTTGAAGGTTTG+GGG - chr8.1:75975186-75975205 MS.gene060482:CDS 30.0%
TTAATGCAATTGTGTCCATA+CGG - chr8.1:75977545-75977564 MS.gene060482:intron 30.0%
TTACTACTTAATCTACCGTA+TGG + chr8.1:75977563-75977582 None:intergenic 30.0%
TTCTTCATGAACATTAGCAT+AGG + chr8.1:75977956-75977975 None:intergenic 30.0%
TTGATCATTTCTGCAAAAGT+TGG + chr8.1:75977703-75977722 None:intergenic 30.0%
TTGTTGGAAGAAAAATCAAC+TGG - chr8.1:75976210-75976229 MS.gene060482:intron 30.0%
! AACTGAACTGTCAATTTTGA+TGG - chr8.1:75977293-75977312 MS.gene060482:intron 30.0%
! ACTCAGAATTTTGAACTCAT+TGG - chr8.1:75974176-75974195 MS.gene060482:intron 30.0%
! AGATAGTTTGTACATTGACA+TGG + chr8.1:75974092-75974111 None:intergenic 30.0%
! ATTTCAAGTAGCATGAGATA+AGG + chr8.1:75975812-75975831 None:intergenic 30.0%
! CCTAGTAAGTATGATAATGA+TGG - chr8.1:75976885-75976904 MS.gene060482:intron 30.0%
! GGATAAATTTAGAGCCTATT+TGG + chr8.1:75978115-75978134 None:intergenic 30.0%
! GTTTTATAACCATATCCCTT+TGG - chr8.1:75975291-75975310 MS.gene060482:CDS 30.0%
! TTGATTTTTCTTCCAACAAC+TGG + chr8.1:75976209-75976228 None:intergenic 30.0%
! TTTCAAGTAGCATGAGATAA+GGG + chr8.1:75975811-75975830 None:intergenic 30.0%
! TTTTAGCAAAAGTTACAGTC+TGG + chr8.1:75977841-75977860 None:intergenic 30.0%
!! AGAGGAATATTTTTGTCAAC+CGG + chr8.1:75976769-75976788 None:intergenic 30.0%
!! CCGAAAGGTATTATAATTTG+TGG - chr8.1:75974279-75974298 MS.gene060482:intron 30.0%
!! CTCACCTTTTCAAGAAATAT+AGG + chr8.1:75975106-75975125 None:intergenic 30.0%
!! TTCACTGCCTTCATTTTAAT+TGG + chr8.1:75974222-75974241 None:intergenic 30.0%
!!! ATGTTTTGATTTTCGTATGC+AGG - chr8.1:75975747-75975766 MS.gene060482:intron 30.0%
AAAAATTTATGGACCTGCCA+CGG - chr8.1:75975221-75975240 MS.gene060482:CDS 35.0%
AAAATCAACTGGATGAAAGC+TGG - chr8.1:75976221-75976240 MS.gene060482:CDS 35.0%
AAATCTATGTACCAGCCAAA+TGG - chr8.1:75975828-75975847 MS.gene060482:intron 35.0%
AACTCATTCGACTTCATAGA+TGG - chr8.1:75976085-75976104 MS.gene060482:CDS 35.0%
AATAGCAAAGACTGTCACAA+AGG - chr8.1:75977657-75977676 MS.gene060482:intron 35.0%
AATGCCAAAGTAGGTCTAAA+TGG - chr8.1:75975861-75975880 MS.gene060482:intron 35.0%
ACATTGTAACCAAAGGGATA+TGG + chr8.1:75975303-75975322 None:intergenic 35.0%
ACTCATTCGACTTCATAGAT+GGG - chr8.1:75976086-75976105 MS.gene060482:CDS 35.0%
AGAAAGAATGTTATGCCGAA+AGG - chr8.1:75974264-75974283 MS.gene060482:intron 35.0%
AGCCATTCCCCAATTTATTA+AGG - chr8.1:75976843-75976862 MS.gene060482:intron 35.0%
AGGTATGTTAAACCAGTTGT+TGG - chr8.1:75976194-75976213 MS.gene060482:intron 35.0%
AGTAAGCTTACTGCTAATAC+TGG + chr8.1:75974387-75974406 None:intergenic 35.0%
AGTTATGTATTTGTCAGTCC+TGG + chr8.1:75976518-75976537 None:intergenic 35.0%
ATTAAATGAAGGCTGCTGTT+AGG + chr8.1:75977530-75977549 None:intergenic 35.0%
ATTCCTCTCATTGCTTTCAT+TGG - chr8.1:75976781-75976800 MS.gene060482:intron 35.0%
ATTTCTTCTCCATCAATTCC+AGG + chr8.1:75978231-75978250 None:intergenic 35.0%
CACTACATACAATCCAAATC+TGG + chr8.1:75977230-75977249 None:intergenic 35.0%
CATTCCCCAATTTATTAAGG+AGG - chr8.1:75976846-75976865 MS.gene060482:intron 35.0%
CATTGTAATCTTCATTGCAC+AGG - chr8.1:75974933-75974952 MS.gene060482:intron 35.0%
CCAACACATTAGTTACAATC+GGG + chr8.1:75974697-75974716 None:intergenic 35.0%
CCCTTGGAATTAATCTTAAC+AGG - chr8.1:75975599-75975618 MS.gene060482:intron 35.0%
CTCCTTAATAAATTGGGGAA+TGG + chr8.1:75976848-75976867 None:intergenic 35.0%
GCAAACAACATTGTAACCAA+AGG + chr8.1:75975310-75975329 None:intergenic 35.0%
GCAATTATCATGTGTGCTAA+GGG + chr8.1:75977087-75977106 None:intergenic 35.0%
GCAGTGAAATCAAGAAGAAA+AGG - chr8.1:75974234-75974253 MS.gene060482:intron 35.0%
GCATTCCTAAATATGCCATT+TGG + chr8.1:75975846-75975865 None:intergenic 35.0%
GCCTGTTAAGATTAATTCCA+AGG + chr8.1:75975603-75975622 None:intergenic 35.0%
GGATACAAGTGTAACAATTG+AGG - chr8.1:75974883-75974902 MS.gene060482:intron 35.0%
GGCATGAATTTGATCTTTGT+TGG - chr8.1:75974300-75974319 MS.gene060482:intron 35.0%
GTTATAAAACCTGACAGAAG+AGG + chr8.1:75975281-75975300 None:intergenic 35.0%
TAAGTGCATGTTTGGATTGA+CGG + chr8.1:75977892-75977911 None:intergenic 35.0%
TACTGGTATTGTAAATGGCA+TGG - chr8.1:75976355-75976374 MS.gene060482:intron 35.0%
TAGCAGTAAGCTTACTGTTA+TGG - chr8.1:75974391-75974410 MS.gene060482:intron 35.0%
TCATGAACATTAGCATAGGT+AGG + chr8.1:75977952-75977971 None:intergenic 35.0%
TCTGAGTCCATTATGTGTAT+TGG + chr8.1:75974163-75974182 None:intergenic 35.0%
TCTGTAGTGGTTGACATATT+TGG - chr8.1:75974753-75974772 MS.gene060482:intron 35.0%
TGCAATTATCATGTGTGCTA+AGG + chr8.1:75977088-75977107 None:intergenic 35.0%
TTAGCACACATGATAATTGC+AGG - chr8.1:75977087-75977106 MS.gene060482:CDS 35.0%
TTCTTAGGGAACAGGAAAAA+AGG - chr8.1:75976987-75977006 MS.gene060482:intron 35.0%
TTTATCACTCTCTAGGCTAA+TGG - chr8.1:75974809-75974828 MS.gene060482:CDS 35.0%
TTTGATCTTTGTTGGAACTG+AGG - chr8.1:75974308-75974327 MS.gene060482:intron 35.0%
! ACTAGTTCTTGAGCATAGTA+TGG + chr8.1:75976281-75976300 None:intergenic 35.0%
! ATGGACTAACAGTTAAAACC+CGG + chr8.1:75976262-75976281 None:intergenic 35.0%
! GAAGTCTTATGGCAGAAAAT+CGG + chr8.1:75977375-75977394 None:intergenic 35.0%
! TCATTTTCGTCGCTAATGAT+TGG - chr8.1:75975778-75975797 MS.gene060482:intron 35.0%
! TCTTTGTATTGGTCATAACG+TGG + chr8.1:75974857-75974876 None:intergenic 35.0%
! TTCTGGTTGCTACCATTATT+AGG - chr8.1:75975976-75975995 MS.gene060482:CDS 35.0%
! TTTTAGATTGACGGTGAGTT+TGG - chr8.1:75977780-75977799 MS.gene060482:intron 35.0%
! TTTTCCTGTTCCCTAAGAAA+TGG + chr8.1:75976986-75977005 None:intergenic 35.0%
!! AGTTTCTCTAAAATGTGTCG+TGG - chr8.1:75976585-75976604 MS.gene060482:intron 35.0%
!! GGTGTTACTGGTATTGTAAA+TGG - chr8.1:75976350-75976369 MS.gene060482:intron 35.0%
!!! CTGGAATTTTAGAATCTCAC+CGG - chr8.1:75976240-75976259 MS.gene060482:CDS 35.0%
!!! TGGAATTTTAGAATCTCACC+GGG - chr8.1:75976241-75976260 MS.gene060482:CDS 35.0%
AAAATTTATGGACCTGCCAC+GGG - chr8.1:75975222-75975241 MS.gene060482:CDS 40.0%
AACAGCCTCTTGTGTAAAAC+AGG + chr8.1:75976494-75976513 None:intergenic 40.0%
AAGCTTACTGCTAATACTGG+TGG + chr8.1:75974384-75974403 None:intergenic 40.0%
ACAGCCTCTTGTGTAAAACA+GGG + chr8.1:75976493-75976512 None:intergenic 40.0%
ACAGTCAAAGAAGGTTTCAC+TGG - chr8.1:75977467-75977486 MS.gene060482:CDS 40.0%
ACCAGCCAAATGGCATATTT+AGG - chr8.1:75975838-75975857 MS.gene060482:intron 40.0%
AGCTCACAGAGAGAAATTTG+TGG - chr8.1:75975371-75975390 MS.gene060482:intron 40.0%
AGGAAAGGATTGTGTGAAGT+AGG + chr8.1:75977197-75977216 None:intergenic 40.0%
AGGTTTCACTGGATTTCAGA+TGG - chr8.1:75977478-75977497 MS.gene060482:CDS 40.0%
AGTGGAATCCATCCACTAAA+AGG - chr8.1:75976387-75976406 MS.gene060482:intron 40.0%
ATCCACAACATTGCATACCA+AGG - chr8.1:75976010-75976029 MS.gene060482:CDS 40.0%
ATCTTTGTTGGAACTGAGGT+TGG - chr8.1:75974312-75974331 MS.gene060482:intron 40.0%
ATGACCAATACAAAGATGCG+TGG - chr8.1:75974861-75974880 MS.gene060482:CDS 40.0%
CAATACCAGTAACACCAGTT+CGG + chr8.1:75976346-75976365 None:intergenic 40.0%
CAATTTCAGACGATCCAGAT+TGG + chr8.1:75977271-75977290 None:intergenic 40.0%
CCAAATCTGGAAAAACCACT+AGG + chr8.1:75977217-75977236 None:intergenic 40.0%
CCAAGGGGAAAAAATGACAA+AGG + chr8.1:75975586-75975605 None:intergenic 40.0%
CCAATTCCACTCCTTTATCT+GGG + chr8.1:75976310-75976329 None:intergenic 40.0%
CCCGATTGTAACTAATGTGT+TGG - chr8.1:75974694-75974713 MS.gene060482:intron 40.0%
CGACGATTCAACAGTAAGAA+TGG - chr8.1:75976546-75976565 MS.gene060482:intron 40.0%
CTACCAATGAAAGCAATGAG+AGG + chr8.1:75976787-75976806 None:intergenic 40.0%
CTCATAGAACCAAGTCTCAT+CGG + chr8.1:75974135-75974154 None:intergenic 40.0%
CTCTTGTGTAAAACAGGGTA+AGG + chr8.1:75976488-75976507 None:intergenic 40.0%
CTGAATAATGTGAGTCTCAG+CGG + chr8.1:75974654-75974673 None:intergenic 40.0%
CTGATAGCATTTCTCTGTAG+TGG - chr8.1:75974740-75974759 MS.gene060482:intron 40.0%
CTGGAGCTTCAACAAAATCA+CGG + chr8.1:75977822-75977841 None:intergenic 40.0%
GGGAACAGGAAAAAAGGAAA+TGG - chr8.1:75976993-75977012 MS.gene060482:intron 40.0%
GGTACAATACACCAAATGGT+GGG + chr8.1:75976462-75976481 None:intergenic 40.0%
GGTAGACTTGAAGAGCAAAA+AGG - chr8.1:75976802-75976821 MS.gene060482:intron 40.0%
GGTTTCACTGGATTTCAGAT+GGG - chr8.1:75977479-75977498 MS.gene060482:CDS 40.0%
GTGGAATCCATCCACTAAAA+GGG - chr8.1:75976388-75976407 MS.gene060482:intron 40.0%
TATCCCACGCATCTTTGTAT+TGG + chr8.1:75974868-75974887 None:intergenic 40.0%
TATGCTCAAGAACTAGTGTC+AGG - chr8.1:75976284-75976303 MS.gene060482:CDS 40.0%
TCCAATTCCACTCCTTTATC+TGG + chr8.1:75976311-75976330 None:intergenic 40.0%
TCTGGAAAAACCACTAGGAA+AGG + chr8.1:75977212-75977231 None:intergenic 40.0%
TGACCAATACAAAGATGCGT+GGG - chr8.1:75974862-75974881 MS.gene060482:CDS 40.0%
TGAGACTCACATTATTCAGC+AGG - chr8.1:75974655-75974674 MS.gene060482:CDS 40.0%
TGAGTTTGGCAAAATCAAGG+TGG - chr8.1:75977794-75977813 MS.gene060482:intron 40.0%
TTAATCTTAACAGGCAGCTC+TGG - chr8.1:75975608-75975627 MS.gene060482:intron 40.0%
TTCACACAATCCTTTCCTAG+TGG - chr8.1:75977199-75977218 MS.gene060482:intron 40.0%
TTGAAGGTTTGGGGAAAAAC+TGG - chr8.1:75975195-75975214 MS.gene060482:CDS 40.0%
TTTAACTAGCTCGTCTACTC+AGG - chr8.1:75976690-75976709 MS.gene060482:intron 40.0%
TTTACTTTAGTGTGACGCTG+TGG - chr8.1:75977615-75977634 MS.gene060482:intron 40.0%
! CCTAGTGGTTTTTCCAGATT+TGG - chr8.1:75977214-75977233 MS.gene060482:CDS 40.0%
! CTTACCCTGTTTTACACAAG+AGG - chr8.1:75976486-75976505 MS.gene060482:CDS 40.0%
! GTTGCCATTTAGACCTACTT+TGG + chr8.1:75975868-75975887 None:intergenic 40.0%
! TATGCCATTTCTTAGGGAAC+AGG - chr8.1:75976979-75976998 MS.gene060482:intron 40.0%
! TCCTAAATATGCCATTTGGC+TGG + chr8.1:75975842-75975861 None:intergenic 40.0%
! TTAGTGGACACAGTCAAAGA+AGG - chr8.1:75977458-75977477 MS.gene060482:CDS 40.0%
! TTGGAGTGCTTCTTTCAGAA+GGG + chr8.1:75976731-75976750 None:intergenic 40.0%
!!! CCTTTGTCATTTTTTCCCCT+TGG - chr8.1:75975583-75975602 MS.gene060482:CDS 40.0%
AATAATGTGAGTCTCAGCGG+CGG + chr8.1:75974651-75974670 None:intergenic 45.0%
AGAAATTGCTCCACAGGCAA+AGG - chr8.1:75978245-75978264 MS.gene060482:CDS 45.0%
ATGGCATGGATGTTCAAGAG+TGG - chr8.1:75976369-75976388 MS.gene060482:intron 45.0%
ATTAGGGACCTGCTAAGAAG+TGG - chr8.1:75978166-75978185 MS.gene060482:CDS 45.0%
CCACAAGGCTCAAATCTACT+AGG + chr8.1:75977132-75977151 None:intergenic 45.0%
CCCAGATAAAGGAGTGGAAT+TGG - chr8.1:75976307-75976326 MS.gene060482:intron 45.0%
CCTAGTAGATTTGAGCCTTG+TGG - chr8.1:75977129-75977148 MS.gene060482:intron 45.0%
CGGTGAGTTTGGCAAAATCA+AGG - chr8.1:75977791-75977810 MS.gene060482:intron 45.0%
GCATGGCTCAAGATCTTTCA+TGG - chr8.1:75977728-75977747 MS.gene060482:intron 45.0%
GCTGGGTACAATACACCAAA+TGG + chr8.1:75976466-75976485 None:intergenic 45.0%
GGCTCAAGATCTTTCATGGA+AGG - chr8.1:75977732-75977751 MS.gene060482:intron 45.0%
GGGTACAATACACCAAATGG+TGG + chr8.1:75976463-75976482 None:intergenic 45.0%
GGTGGTTTAGGAGATGTTCT+AGG - chr8.1:75974351-75974370 MS.gene060482:intron 45.0%
GTACCAATTGTTGCCTCAAC+AGG - chr8.1:75977431-75977450 MS.gene060482:CDS 45.0%
GTGTAAAACAGGGTAAGGCT+GGG + chr8.1:75976483-75976502 None:intergenic 45.0%
GTTTGGATTGACGGTGAGTT+TGG + chr8.1:75977883-75977902 None:intergenic 45.0%
TAGCTCGTCTACTCAGGTAT+TGG - chr8.1:75976696-75976715 MS.gene060482:intron 45.0%
TCATATCCTGACAAGGCTAG+AGG - chr8.1:75977042-75977061 MS.gene060482:CDS 45.0%
TGCCTTGGTATGCAATGTTG+TGG + chr8.1:75976015-75976034 None:intergenic 45.0%
TGGAGAAGAAATTGCTCCAC+AGG - chr8.1:75978239-75978258 MS.gene060482:CDS 45.0%
TGGAGCAAAACTGGTGGTTT+AGG - chr8.1:75974339-75974358 MS.gene060482:intron 45.0%
TGGAGTTCCATAGACTGCAA+GGG + chr8.1:75977683-75977702 None:intergenic 45.0%
TGTAGCTGAATGAGACCACA+AGG + chr8.1:75977147-75977166 None:intergenic 45.0%
TGTGTAAAACAGGGTAAGGC+TGG + chr8.1:75976484-75976503 None:intergenic 45.0%
TTAGGGACCTGCTAAGAAGT+GGG - chr8.1:75978167-75978186 MS.gene060482:CDS 45.0%
TTGGAGTTCCATAGACTGCA+AGG + chr8.1:75977684-75977703 None:intergenic 45.0%
! AAACCACCAGTTTTGCTCCA+TGG + chr8.1:75974339-75974358 None:intergenic 45.0%
! CTTGGAGTGCTTCTTTCAGA+AGG + chr8.1:75976732-75976751 None:intergenic 45.0%
! GCTACATTTTCCTTTGCCTG+TGG + chr8.1:75978258-75978277 None:intergenic 45.0%
! GGTAGCTTTACACGACTAGT+AGG + chr8.1:75977931-75977950 None:intergenic 45.0%
! GGTTTAGGAGATGTTCTAGG+AGG - chr8.1:75974354-75974373 MS.gene060482:intron 45.0%
! TTACACAAGAGGCTGTTTCC+AGG - chr8.1:75976497-75976516 MS.gene060482:CDS 45.0%
!! AAAACAGCACCGATGAGACT+TGG - chr8.1:75974123-75974142 MS.gene060482:CDS 45.0%
!! ACGTTTTAGCCTCTTCTGTC+AGG - chr8.1:75975269-75975288 MS.gene060482:CDS 45.0%
!! GAGGAAGTGCTGCTAAGTTT+GGG - chr8.1:75978189-75978208 MS.gene060482:CDS 45.0%
!! TCGTCTACTCAGGTATTGGA+AGG - chr8.1:75976700-75976719 MS.gene060482:intron 45.0%
ACAAAGGCCCTTGCAGTCTA+TGG - chr8.1:75977673-75977692 MS.gene060482:intron 50.0%
ACTATAGCTCCCGCATATGC+AGG - chr8.1:75976422-75976441 MS.gene060482:intron 50.0%
ACTTCCTCCCACTTCTTAGC+AGG + chr8.1:75978177-75978196 None:intergenic 50.0%
ATAATGTGAGTCTCAGCGGC+GGG + chr8.1:75974650-75974669 None:intergenic 50.0%
CAGCTACAAGCTATGCGCTA+CGG - chr8.1:75977159-75977178 MS.gene060482:intron 50.0%
CATCCACTAAAAGGGCAACC+CGG - chr8.1:75976396-75976415 MS.gene060482:intron 50.0%
CCAAGCAGAAGTTGGATTGC+CGG - chr8.1:75976747-75976766 MS.gene060482:intron 50.0%
CCAAGGCAGATTTGCATTCG+CGG - chr8.1:75976027-75976046 MS.gene060482:CDS 50.0%
CCAATTGTTGCCTCAACAGG+TGG - chr8.1:75977434-75977453 MS.gene060482:CDS 50.0%
CCACCTGTTGAGGCAACAAT+TGG + chr8.1:75977437-75977456 None:intergenic 50.0%
CGTCGCTAATGATTGGCACA+CGG - chr8.1:75975785-75975804 MS.gene060482:intron 50.0%
CTAGTGTCAGGCCCAGATAA+AGG - chr8.1:75976296-75976315 MS.gene060482:CDS 50.0%
CTATAGCTCCCGCATATGCA+GGG - chr8.1:75976423-75976442 MS.gene060482:intron 50.0%
CTGCTAAGTTTGGGAGTTCC+TGG - chr8.1:75978198-75978217 MS.gene060482:CDS 50.0%
GACAACATTCTTCGCCGAAC+TGG - chr8.1:75976329-75976348 MS.gene060482:intron 50.0%
GCTATTGCATCCACATCAGC+CGG + chr8.1:75977643-75977662 None:intergenic 50.0%
GGCAGTGAACCTGGAATTGA+TGG - chr8.1:75978219-75978238 MS.gene060482:CDS 50.0%
GTCCACTAATCCACCTGTTG+AGG + chr8.1:75977447-75977466 None:intergenic 50.0%
GTTGGTCCATGGAGCAAAAC+TGG - chr8.1:75974330-75974349 MS.gene060482:intron 50.0%
TCAATTCCAGGTTCACTGCC+AGG + chr8.1:75978219-75978238 None:intergenic 50.0%
TGCATGCAGTCAGTCCAATC+TGG - chr8.1:75977254-75977273 MS.gene060482:CDS 50.0%
TTAGTGTGACGCTGTGGATC+CGG - chr8.1:75977621-75977640 MS.gene060482:intron 50.0%
TTGGTCATAACGTGGAGCGA+TGG + chr8.1:75974849-75974868 None:intergenic 50.0%
! GAAGCACTCCAAGCAGAAGT+TGG - chr8.1:75976739-75976758 MS.gene060482:intron 50.0%
! GTCTTGGTAATCATCTCCCG+TGG + chr8.1:75975241-75975260 None:intergenic 50.0%
! TTGGAACTGAGGTTGGTCCA+TGG - chr8.1:75974319-75974338 MS.gene060482:intron 50.0%
!! GGAGGAAGTGCTGCTAAGTT+TGG - chr8.1:75978188-75978207 MS.gene060482:CDS 50.0%
!! TGCCTCAACAGGTGGATTAG+TGG - chr8.1:75977442-75977461 MS.gene060482:CDS 50.0%
ATGCGGGAGCTATAGTGCAC+CGG + chr8.1:75976418-75976437 None:intergenic 55.0%
CCGCGAATGCAAATCTGCCT+TGG + chr8.1:75976030-75976049 None:intergenic 55.0%
CCGGCAATCCAACTTCTGCT+TGG + chr8.1:75976750-75976769 None:intergenic 55.0%
GGTCCATGGAGCAAAACTGG+TGG - chr8.1:75974333-75974352 MS.gene060482:intron 55.0%
GTCAGGCCCAGATAAAGGAG+TGG - chr8.1:75976301-75976320 MS.gene060482:CDS 55.0%
TGGTAATCATCTCCCGTGGC+AGG + chr8.1:75975237-75975256 None:intergenic 55.0%
! CGGGTTGCCCTTTTAGTGGA+TGG + chr8.1:75976398-75976417 None:intergenic 55.0%
!! CTTCGCCGAACTGGTGTTAC+TGG - chr8.1:75976338-75976357 MS.gene060482:intron 55.0%
!! GCAACTCCTCTAGCCTTGTC+AGG + chr8.1:75977051-75977070 None:intergenic 55.0%
CATATGCAGGGTCCGGGAAG+GGG - chr8.1:75976435-75976454 MS.gene060482:intron 60.0%
CTTCCCGGACCCTGCATATG+CGG + chr8.1:75976435-75976454 None:intergenic 60.0%
GCATATGCAGGGTCCGGGAA+GGG - chr8.1:75976434-75976453 MS.gene060482:intron 60.0%
GGAGTTCCTGGCAGTGAACC+TGG - chr8.1:75978210-75978229 MS.gene060482:CDS 60.0%
GGGACCTGCTAAGAAGTGGG+AGG - chr8.1:75978170-75978189 MS.gene060482:CDS 60.0%
TGCGGGAGCTATAGTGCACC+GGG + chr8.1:75976417-75976436 None:intergenic 60.0%
TTCCCGGACCCTGCATATGC+GGG + chr8.1:75976434-75976453 None:intergenic 60.0%
! CAAATGGTGGGACCCCTTCC+CGG + chr8.1:75976450-75976469 None:intergenic 60.0%
! GCACCGGGTTGCCCTTTTAG+TGG + chr8.1:75976402-75976421 None:intergenic 60.0%
!! AGGCAGCTCTGGAAGCAGCA+AGG - chr8.1:75975619-75975638 MS.gene060482:intron 60.0%
!! GGCAGCTCTGGAAGCAGCAA+GGG - chr8.1:75975620-75975639 MS.gene060482:intron 60.0%
CGCATATGCAGGGTCCGGGA+AGG - chr8.1:75976433-75976452 MS.gene060482:intron 65.0%
CGCTGTGGATCCGGCTGATG+TGG - chr8.1:75977630-75977649 MS.gene060482:intron 65.0%
CGGGAAGGGGTCCCACCATT+TGG - chr8.1:75976448-75976467 MS.gene060482:intron 65.0%
CTCCCGCATATGCAGGGTCC+GGG - chr8.1:75976429-75976448 MS.gene060482:intron 65.0%
GCTCCCGCATATGCAGGGTC+CGG - chr8.1:75976428-75976447 MS.gene060482:intron 65.0%
GCTGACTGCGCGCACTCACG+AGG - chr8.1:75977326-75977345 MS.gene060482:intron 70.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 75974036 75978287 75974036 ID=MS.gene060482
chr8.1 mRNA 75974036 75978287 75974036 ID=MS.gene060482.t1;Parent=MS.gene060482
chr8.1 exon 75977928 75978287 75977928 ID=MS.gene060482.t1.exon1;Parent=MS.gene060482.t1
chr8.1 CDS 75977928 75978287 75977928 ID=cds.MS.gene060482.t1;Parent=MS.gene060482.t1
chr8.1 exon 75977419 75977499 75977419 ID=MS.gene060482.t1.exon2;Parent=MS.gene060482.t1
chr8.1 CDS 75977419 75977499 75977419 ID=cds.MS.gene060482.t1;Parent=MS.gene060482.t1
chr8.1 exon 75977203 75977301 75977203 ID=MS.gene060482.t1.exon3;Parent=MS.gene060482.t1
chr8.1 CDS 75977203 75977301 75977203 ID=cds.MS.gene060482.t1;Parent=MS.gene060482.t1
chr8.1 exon 75977033 75977122 75977033 ID=MS.gene060482.t1.exon4;Parent=MS.gene060482.t1
chr8.1 CDS 75977033 75977122 75977033 ID=cds.MS.gene060482.t1;Parent=MS.gene060482.t1
chr8.1 exon 75976639 75976702 75976639 ID=MS.gene060482.t1.exon5;Parent=MS.gene060482.t1
chr8.1 CDS 75976639 75976702 75976639 ID=cds.MS.gene060482.t1;Parent=MS.gene060482.t1
chr8.1 exon 75976454 75976554 75976454 ID=MS.gene060482.t1.exon6;Parent=MS.gene060482.t1
chr8.1 CDS 75976454 75976554 75976454 ID=cds.MS.gene060482.t1;Parent=MS.gene060482.t1
chr8.1 exon 75976216 75976325 75976216 ID=MS.gene060482.t1.exon7;Parent=MS.gene060482.t1
chr8.1 CDS 75976216 75976325 75976216 ID=cds.MS.gene060482.t1;Parent=MS.gene060482.t1
chr8.1 exon 75975914 75976127 75975914 ID=MS.gene060482.t1.exon8;Parent=MS.gene060482.t1
chr8.1 CDS 75975914 75976127 75975914 ID=cds.MS.gene060482.t1;Parent=MS.gene060482.t1
chr8.1 exon 75975435 75975611 75975435 ID=MS.gene060482.t1.exon9;Parent=MS.gene060482.t1
chr8.1 CDS 75975435 75975611 75975435 ID=cds.MS.gene060482.t1;Parent=MS.gene060482.t1
chr8.1 exon 75975138 75975329 75975138 ID=MS.gene060482.t1.exon10;Parent=MS.gene060482.t1
chr8.1 CDS 75975138 75975329 75975138 ID=cds.MS.gene060482.t1;Parent=MS.gene060482.t1
chr8.1 exon 75974806 75974892 75974806 ID=MS.gene060482.t1.exon11;Parent=MS.gene060482.t1
chr8.1 CDS 75974806 75974892 75974806 ID=cds.MS.gene060482.t1;Parent=MS.gene060482.t1
chr8.1 exon 75974570 75974698 75974570 ID=MS.gene060482.t1.exon12;Parent=MS.gene060482.t1
chr8.1 CDS 75974570 75974698 75974570 ID=cds.MS.gene060482.t1;Parent=MS.gene060482.t1
chr8.1 exon 75974036 75974152 75974036 ID=MS.gene060482.t1.exon13;Parent=MS.gene060482.t1
chr8.1 CDS 75974036 75974152 75974036 ID=cds.MS.gene060482.t1;Parent=MS.gene060482.t1
Gene Sequence

>MS.gene060482

ATGGCAACAGTGACTGCTTCAAGCAACATAGCATCAAGAAATTCTCATATCTACCATGTCAATGTACAAACTATCTCATGTGAGTCTAAAACAGCACCGATGAGACTTGGTTCTATGAGAAAAGCCAATACACATAATGGACTCAGAATTTTGAACTCATTGGATGAGCTACTAAATAGAACTCCAATTAAAATGAAGGCAGTGAAATCAAGAAGAAAAGGTCTTCAGAGAAAGAATGTTATGCCGAAAGGTATTATAATTTGTGGCATGAATTTGATCTTTGTTGGAACTGAGGTTGGTCCATGGAGCAAAACTGGTGGTTTAGGAGATGTTCTAGGAGGTCTTCCACCAGTATTAGCAGTAAGCTTACTGTTATGGTTTGCTTTATATTTATTTATTTATTTATTTAGCTATATACTTCGTAGAAATGCTAACATGACACTCTTTTTGAAGTTCAGTTATTATGTATTGACGATATAAAACATCTGCAAGATTTCTACGTTGTAAATTATGATTGGCTGTGTTTTTGTAGAACTTTTTTTACATTGTCAGTGCGTAGCTATTAAATTTCTCTTTTTGAAATACTCACAACAACTGAAATTTATACGAATCCCGCCGCTGAGACTCACATTATTCAGCAGGAATCTTGTGATTTTCACCCGATTGTAACTAATGTGTTGGAAAATGTACGTTTAAAGAGTGTGCTGATAGCATTTCTCTGTAGTGGTTGACATATTTGGTGTTCAGTTAAGTCATAACAAGACTTTCTCTAATTTATCACTCTCTAGGCTAATGGACACAGAGTTATGACCATCGCTCCACGTTATGACCAATACAAAGATGCGTGGGATACAAGTGTAACAATTGAGGTATATATTATCCTTGACAAAATGTTTTCATTGTAATCTTCATTGCACAGGTTTTCTTTTTATCCAATTGTGCTATGCTATAGTTAAATGCATTGTATTGCAATCTGTTTATTACAGGTAAAAGTAGGAGATAGAAAAGAAAAAGTTCGCTTCTTTCATTGCTTTAAAAGAGGAGTTGATCGCGTCTTTGCAGATCACCCTATATTTCTTGAAAAGGTGAGAGTATTTCTCCTTTTCTTTTGAGCTATATACTCACTGTTTTGCTTTCAGATACTTAATGATGATTGAATTTGAAGGTTTGGGGAAAAACTGGAACAAAAATTTATGGACCTGCCACGGGAGATGATTACCAAGACAATCAACTACGTTTTAGCCTCTTCTGTCAGGTTTTATAACCATATCCCTTTGGTTACAATGTTGTTTGCACAAATATTGTATCTGTAGCTTTTTATATTGTCTAAGGTGCAGCTCACAGAGAGAAATTTGTGGAAAGAATCTATATTAGTTACGATTTATAATGTGCTGTGTTCACTTATTGAGCAGCAACGACCTTTAACAGTAAATCACAGTCTCACATTATGCATATATCAATGTTTTGTATCAACTGTTAATCACATCTCTTTATAAATAAAGCTATACATTGTAAAAGTAGCATGTTCTGCTTTAGTCCTAATTTTTCCTTTGTCATTTTTTCCCCTTGGAATTAATCTTAACAGGCAGCTCTGGAAGCAGCAAGGGTTCTGAATCTCACGAGCAATAAATATTTCTCAGGACCATATGGTATGAACTATAGTCATAAATGAAATTCTTGGAAACAAATGGTTAAAGATCATTTAAGCACGATGTTTTGATTTTCGTATGCAGGTGAAGATGTCATTTTCGTCGCTAATGATTGGCACACGGCCCTTATCTCATGCTACTTGAAATCTATGTACCAGCCAAATGGCATATTTAGGAATGCCAAAGTAGGTCTAAATGGCAACTTCATTATTATGATGCAACACTGATAGATATTATTAGTTATTTAACGATTTAATCATTTGAAAAACTAACAAGTTCTTCAAACTTTCTTTCTGGTTGCTACCATTATTAGGTTGTTTTTTGTATCCACAACATTGCATACCAAGGCAGATTTGCATTCGCGGACTATTCACTTCTCAATCTTCCCGACCAATTTAAAAACTCATTCGACTTCATAGATGGGTATGCTTTTCATAATTTGTGAACTAACTGACGAATTTAGCATTAACGAACAATAAAAAGTTTACTTTATGTTGTTCTAATCTTGTAGGTATGTTAAACCAGTTGTTGGAAGAAAAATCAACTGGATGAAAGCTGGAATTTTAGAATCTCACCGGGTTTTAACTGTTAGTCCATACTATGCTCAAGAACTAGTGTCAGGCCCAGATAAAGGAGTGGAATTGGACAACATTCTTCGCCGAACTGGTGTTACTGGTATTGTAAATGGCATGGATGTTCAAGAGTGGAATCCATCCACTAAAAGGGCAACCCGGTGCACTATAGCTCCCGCATATGCAGGGTCCGGGAAGGGGTCCCACCATTTGGTGTATTGTACCCAGCCTTACCCTGTTTTACACAAGAGGCTGTTTCCAGGACTGACAAATACATAACTGTCAAATACGACGATTCAACAGTAAGAATGGTTTTCTTGAGATGTAAAGTTTCTCTAAAATGTGTCGTGGCTTATAAGAAAAAGAATTTAATCTATACACACTGAATGACACTGCATGAAACTTGAACTCTAAGACAATTACATAACAAATTTTTAACTAGCTCGTCTACTCAGGTATTGGAAGGAAAAGCCCTTCTGAAAGAAGCACTCCAAGCAGAAGTTGGATTGCCGGTTGACAAAAATATTCCTCTCATTGCTTTCATTGGTAGACTTGAAGAGCAAAAAGGTTCTGATATTCTTGTAGCAGCCATTCCCCAATTTATTAAGGAGGATGTTCAGATAGTAGCCCTAGTAAGTATGATAATGATGGAAAAAAAAGTAATTTTCTTTCTGATCCTTTCTTACTTCATTAAAGGAATAAGATATCTCATTTAAATATGTTATGCCATTTCTTAGGGAACAGGAAAAAAGGAAATGGAAAAGCAACTTCAACAACTTGAAATATCATATCCTGACAAGGCTAGAGGAGTTGCAAAATTCAATGTTCCCTTAGCACACATGATAATTGCAGGAGCTGATTATATATTGATTCCTAGTAGATTTGAGCCTTGTGGTCTCATTCAGCTACAAGCTATGCGCTACGGAACTGTATGATTCCTACTTCACACAATCCTTTCCTAGTGGTTTTTCCAGATTTGGATTGTATGTAGTGTGACTGCATGCAGTCAGTCCAATCTGGATCGTCTGAAATTGAAAACTGAACTGTCAATTTTGATGGTTCAGATGTAGCTGACTGCGCGCACTCACGAGGTTGTGAATGCACAAAACGCAGATCCGATTTTCTGCCATAAGACTTCCTCAATAATTTGTCTCACATTTTTTACTTCAACTAGGTACCAATTGTTGCCTCAACAGGTGGATTAGTGGACACAGTCAAAGAAGGTTTCACTGGATTTCAGATGGGTTCCTTCAATGTTGAAGTAATAATACCTAACAGCAGCCTTCATTTAATGCAATTGTGTCCATACGGTAGATTAAGTAGTAATCACTACCATTATCTTATTGTTTCTTAAATATTTTACTTTAGTGTGACGCTGTGGATCCGGCTGATGTGGATGCAATAGCAAAGACTGTCACAAAGGCCCTTGCAGTCTATGGAACTCCAACTTTTGCAGAAATGATCAAGAATTGCATGGCTCAAGATCTTTCATGGAAGGTGAGTTAGAGCAGAATTTTAGTGCATTTTAGATTGACGGTGAGTTTGGCAAAATCAAGGTGGCACCGTGATTTTGTTGAAGCTCCAGACTGTAACTTTTGCTAAAATCACAGTGACATGATTCTGCCAAACTCACCGTCAATCCAAACATGCACTTAGTAGTTTTTGTTTTCTCCTACTAGTCGTGTAAAGCTACCTACCTATGCTAATGTTCATGAAGAAGCTATGTGATAGCCTACGAAAAAAATTAGGATACAGAAGCTAGTTTAAACTTACAAAATTTTTATTTTAAAAACTTATAGTTATTGCAAAGACTTAATATTTCTTTATTTCTATAAGAGCTCCATGACAAGTTTATCCAAATAGGCTCTAAATTTATCCCATCAACTGAGTAACTGAATTTTGTTTTGGAATTAGGGACCTGCTAAGAAGTGGGAGGAAGTGCTGCTAAGTTTGGGAGTTCCTGGCAGTGAACCTGGAATTGATGGAGAAGAAATTGCTCCACAGGCAAAGGAAAATGTAGCTACTCCATGA

Protein sequence

>MS.gene060482.t1

MATVTASSNIASRNSHIYHVNVQTISCESKTAPMRLGSMRKANTHNGLRILNSLDELLNRTPIKMKAVKSRRKGLQRKNVMPKGIIICGMNLIFVGTEVGPWSKTGGLGDVLGGLPPVLAANGHRVMTIAPRYDQYKDAWDTSVTIEVKVGDRKEKVRFFHCFKRGVDRVFADHPIFLEKVWGKTGTKIYGPATGDDYQDNQLRFSLFCQAALEAARVLNLTSNKYFSGPYGEDVIFVANDWHTALISCYLKSMYQPNGIFRNAKVVFCIHNIAYQGRFAFADYSLLNLPDQFKNSFDFIDGYVKPVVGRKINWMKAGILESHRVLTVSPYYAQELVSGPDKGVELDNILRRTGVTGIVNGMDVQEWNPSTKRVLEGKALLKEALQAEVGLPVDKNIPLIAFIGRLEEQKGSDILVAAIPQFIKEDVQIVALGTGKKEMEKQLQQLEISYPDKARGVAKFNVPLAHMIIAGADYILIPSRFEPCGLIQLQAMRYGTVPIVASTGGLVDTVKEGFTGFQMGSFNVECDAVDPADVDAIAKTVTKALAVYGTPTFAEMIKNCMAQDLSWKGPAKKWEEVLLSLGVPGSEPGIDGEEIAPQAKENVATP