Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74221.t1 | XP_003592799.2 | 93.5 | 402 | 25 | 1 | 1 | 401 | 1 | 402 | 1.30E-201 | 712.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74221.t1 | Q9MAT6 | 59.7 | 380 | 115 | 10 | 1 | 362 | 1 | 360 | 1.6e-102 | 374.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74221.t1 | G7IF34 | 93.5 | 402 | 25 | 1 | 1 | 401 | 1 | 402 | 9.7e-202 | 712.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene74221.t1 | TR | ARID |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049427 | MS.gene74221 | 0.828368 | 9.35E-55 | -1.69E-46 |
| MS.gene051666 | MS.gene74221 | 0.805362 | 1.38E-49 | -1.69E-46 |
| MS.gene055397 | MS.gene74221 | 0.806641 | 7.45E-50 | -1.69E-46 |
| MS.gene057011 | MS.gene74221 | 0.804293 | 2.32E-49 | -1.69E-46 |
| MS.gene059960 | MS.gene74221 | 0.805296 | 1.43E-49 | -1.69E-46 |
| MS.gene061150 | MS.gene74221 | 0.807296 | 5.42E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74221.t1 | MTR_1g116180 | 96.766 | 402 | 12 | 1 | 1 | 401 | 1 | 402 | 0.0 | 806 |
| MS.gene74221.t1 | MTR_1g116180 | 98.071 | 311 | 5 | 1 | 1 | 310 | 1 | 311 | 0.0 | 633 |
| MS.gene74221.t1 | MTR_7g005970 | 61.598 | 388 | 131 | 6 | 1 | 381 | 1 | 377 | 1.25e-157 | 451 |
| MS.gene74221.t1 | MTR_3g114920 | 45.283 | 318 | 155 | 5 | 24 | 338 | 20 | 321 | 1.13e-83 | 259 |
| MS.gene74221.t1 | MTR_3g009890 | 44.690 | 226 | 104 | 5 | 24 | 247 | 29 | 235 | 6.37e-52 | 175 |
| MS.gene74221.t1 | MTR_5g080030 | 22.662 | 278 | 181 | 8 | 66 | 320 | 70 | 336 | 3.85e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74221.t1 | AT1G04880 | 60.000 | 380 | 114 | 11 | 1 | 362 | 1 | 360 | 1.11e-134 | 393 |
| MS.gene74221.t1 | AT1G76110 | 44.643 | 336 | 162 | 8 | 2 | 334 | 12 | 326 | 1.20e-84 | 261 |
| MS.gene74221.t1 | AT3G13350 | 45.545 | 303 | 133 | 4 | 29 | 330 | 34 | 305 | 1.98e-82 | 255 |
| MS.gene74221.t1 | AT1G55650 | 36.562 | 320 | 154 | 7 | 12 | 330 | 11 | 282 | 1.89e-60 | 199 |
Find 95 sgRNAs with CRISPR-Local
Find 271 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATCCACTTCTGTTTGGTTT+TGG | 0.220656 | 1.2:+86262141 | None:intergenic |
| ATTGCAGGATTCCTGTTATT+GGG | 0.246287 | 1.2:-86264981 | MS.gene74221:intron |
| TATTGCAGGATTCCTGTTAT+TGG | 0.282044 | 1.2:-86264982 | MS.gene74221:intron |
| TGTGGATTCATTGCCTGTTA+TGG | 0.326537 | 1.2:-86261444 | MS.gene74221:CDS |
| GAAGCATTTGTAGCCGTTGA+TGG | 0.327945 | 1.2:+86264478 | None:intergenic |
| AATAATAGATTTGTTCATAA+TGG | 0.330253 | 1.2:+86264419 | None:intergenic |
| GTACCTCTCTTTGTCCTTCA+CGG | 0.336959 | 1.2:+86261667 | None:intergenic |
| GTATGTGAAAACTGCATCTT+TGG | 0.346993 | 1.2:+86264242 | None:intergenic |
| GTGGATTCATTGCCTGTTAT+GGG | 0.359014 | 1.2:-86261443 | MS.gene74221:CDS |
| CGGCAGGATCTCAGGTTGTC+GGG | 0.362545 | 1.2:-86262377 | MS.gene74221:CDS |
| AGATCATTAAAGATAGAAAA+TGG | 0.378478 | 1.2:-86264528 | MS.gene74221:CDS |
| GCTCAAAGCTGTCTCTTTCA+TGG | 0.381404 | 1.2:+86265293 | None:intergenic |
| GCATTCAACATGTCAGTATC+TGG | 0.384305 | 1.2:+86261557 | None:intergenic |
| TGCATCTTTGGAGCAGGAGC+TGG | 0.387029 | 1.2:+86264254 | None:intergenic |
| CAGGTTGTCGGGGTCATTGA+TGG | 0.395002 | 1.2:-86262366 | MS.gene74221:CDS |
| TATCTAGTTACTGTCACAAT+TGG | 0.419081 | 1.2:-86262327 | MS.gene74221:CDS |
| TCAGCACCAACTCCCATAAC+AGG | 0.424034 | 1.2:+86261431 | None:intergenic |
| AAATTGTATCCACTTCTGTT+TGG | 0.426908 | 1.2:+86262135 | None:intergenic |
| CTCAGCAATGGGATCATCTT+CGG | 0.429472 | 1.2:-86262397 | MS.gene74221:intron |
| TCATTGCCTGTTATGGGAGT+TGG | 0.435413 | 1.2:-86261437 | MS.gene74221:CDS |
| ATCATCTTCGGCAGGATCTC+AGG | 0.435568 | 1.2:-86262385 | MS.gene74221:CDS |
| ATTGATGGGAAATTTGATAG+TGG | 0.443834 | 1.2:-86262351 | MS.gene74221:CDS |
| AGAGAGGTACATAACAGAAA+TGG | 0.452384 | 1.2:-86261654 | MS.gene74221:CDS |
| TCGGCAGGATCTCAGGTTGT+CGG | 0.453538 | 1.2:-86262378 | MS.gene74221:CDS |
| TGTTGTTAGCAGGAACACTA+TGG | 0.456419 | 1.2:+86262241 | None:intergenic |
| GCTGTCTCTTTCATGGGTAA+TGG | 0.461532 | 1.2:+86265300 | None:intergenic |
| CAAGCTCTTCATACTTAGCT+TGG | 0.463066 | 1.2:-86265217 | MS.gene74221:CDS |
| GAACATACCGGAAGTTGTAT+TGG | 0.464656 | 1.2:+86264378 | None:intergenic |
| TGGTGGGATGCTGGCAGCAC+AGG | 0.472613 | 1.2:+86262261 | None:intergenic |
| AACTGGACCAATACAACTTC+CGG | 0.475197 | 1.2:-86264385 | MS.gene74221:intron |
| AGTTACTGTCACAATTGGTT+CGG | 0.475294 | 1.2:-86262322 | MS.gene74221:CDS |
| GGAAGGACCGAGAGATTAGT+AGG | 0.477594 | 1.2:-86262068 | MS.gene74221:CDS |
| TTCACCTATGGCAACATATG+AGG | 0.483062 | 1.2:-86265256 | MS.gene74221:CDS |
| AACATGTCAGTATCTGGTTC+AGG | 0.486501 | 1.2:+86261563 | None:intergenic |
| GCGGTCACGTTGTTGTTAGC+AGG | 0.489436 | 1.2:+86262231 | None:intergenic |
| CAAGCTAAGTATGAAGAGCT+TGG | 0.497014 | 1.2:+86265218 | None:intergenic |
| CTTTGGAGCAGGAGCTGGGA+TGG | 0.499860 | 1.2:+86264259 | None:intergenic |
| GGAACACTATGGTGGGATGC+TGG | 0.501068 | 1.2:+86262252 | None:intergenic |
| TTTAACTGTTGAAAGACAGC+TGG | 0.504737 | 1.2:+86264203 | None:intergenic |
| CCAGGGAGCCTACATGAACT+TGG | 0.508162 | 1.2:+86265170 | None:intergenic |
| GTGTCCATCGTCGCCGACGC+AGG | 0.509894 | 1.2:-86262200 | MS.gene74221:CDS |
| TTTGTTGAAGTGACTTCTCG+TGG | 0.510774 | 1.2:-86264931 | MS.gene74221:CDS |
| GGAGAAGCTCCACACTCTCA+TGG | 0.512213 | 1.2:-86265196 | MS.gene74221:CDS |
| AAGCTAAGTATGAAGAGCTT+GGG | 0.516105 | 1.2:+86265219 | None:intergenic |
| CGGTCCTTCCCTCGGTGAAG+AGG | 0.519858 | 1.2:+86262081 | None:intergenic |
| GCATCTTTGGAGCAGGAGCT+GGG | 0.522935 | 1.2:+86264255 | None:intergenic |
| CGAGAGATTAGTAGGACCAT+TGG | 0.525975 | 1.2:-86262060 | MS.gene74221:CDS |
| TGGTGAATATCCTTCACCTA+TGG | 0.528306 | 1.2:-86265268 | MS.gene74221:CDS |
| TTGCAGGATTCCTGTTATTG+GGG | 0.528895 | 1.2:-86264980 | MS.gene74221:intron |
| TAATCTCTCGGTCCTTCCCT+CGG | 0.534837 | 1.2:+86262073 | None:intergenic |
| GAAAACTGCATCTTTGGAGC+AGG | 0.538241 | 1.2:+86264248 | None:intergenic |
| CTCAAAGCTGTCTCTTTCAT+GGG | 0.539064 | 1.2:+86265294 | None:intergenic |
| TCTTCCTGCGTCGGCGACGA+TGG | 0.540297 | 1.2:+86262196 | None:intergenic |
| TTGAAGTGACTTCTCGTGGA+GGG | 0.541093 | 1.2:-86264927 | MS.gene74221:CDS |
| CCGTCTGAACTACTCTGCTC+CGG | 0.545473 | 1.2:+86261512 | None:intergenic |
| GATCATTCTTCAACTTCTCA+CGG | 0.547465 | 1.2:+86261624 | None:intergenic |
| CAATGGTCCTACTAATCTCT+CGG | 0.547885 | 1.2:+86262061 | None:intergenic |
| TGATGACTATGAAGATGATA+AGG | 0.548324 | 1.2:-86261486 | MS.gene74221:CDS |
| GTTAATTCTGCTCCGCCTGA+AGG | 0.550930 | 1.2:-86264179 | MS.gene74221:intron |
| GTAGGACCATTGGTGAACTC+TGG | 0.551646 | 1.2:-86262050 | MS.gene74221:CDS |
| CACCCAAAACCAAACAGAAG+TGG | 0.557660 | 1.2:-86262144 | MS.gene74221:CDS |
| AGGTTGTCGGGGTCATTGAT+GGG | 0.564891 | 1.2:-86262365 | MS.gene74221:CDS |
| TCATATGTTGCCATAGGTGA+AGG | 0.568033 | 1.2:+86265258 | None:intergenic |
| TCTCTGATTTCTTCCTGCGT+CGG | 0.568830 | 1.2:+86262187 | None:intergenic |
| GGCAGACTCTCTTCAAACTC+CGG | 0.569431 | 1.2:-86261531 | MS.gene74221:CDS |
| GAGAAGCTCCACACTCTCAT+GGG | 0.571795 | 1.2:-86265195 | MS.gene74221:CDS |
| TCTTTGCAGAACAGCATCCA+AGG | 0.571889 | 1.2:-86262110 | MS.gene74221:CDS |
| GCAATGGGATCATCTTCGGC+AGG | 0.580770 | 1.2:-86262393 | MS.gene74221:CDS |
| TCAGGAAATCGCTGTTGAAG+TGG | 0.581487 | 1.2:+86261581 | None:intergenic |
| AAAGAGACAGCTTTGAGCCA+TGG | 0.588397 | 1.2:-86265288 | MS.gene74221:CDS |
| GGCTAAAACCTCTTCACCGA+GGG | 0.597780 | 1.2:-86262089 | MS.gene74221:CDS |
| TGTTAGCAGGAACACTATGG+TGG | 0.605828 | 1.2:+86262244 | None:intergenic |
| AAGACAGCTGGTTGAACTTG+TGG | 0.608568 | 1.2:+86264215 | None:intergenic |
| CCGGAGCAGAGTAGTTCAGA+CGG | 0.612929 | 1.2:-86261512 | MS.gene74221:CDS |
| TTATCAAGATAAAGCCGTGA+AGG | 0.616173 | 1.2:-86261681 | MS.gene74221:CDS |
| CTATGAAGATGATAAGGTGA+AGG | 0.616653 | 1.2:-86261480 | MS.gene74221:CDS |
| CTTGTTCCAGAGTTCACCAA+TGG | 0.619707 | 1.2:+86262044 | None:intergenic |
| ACCTCCTCATATGTTGCCAT+AGG | 0.625420 | 1.2:+86265252 | None:intergenic |
| AAAACCTCTTCACCGAGGGA+AGG | 0.626858 | 1.2:-86262085 | MS.gene74221:CDS |
| ACCTATGGCAACATATGAGG+AGG | 0.630539 | 1.2:-86265253 | MS.gene74221:CDS |
| AACAACGTGACCGCCTCTGT+CGG | 0.631474 | 1.2:-86262222 | MS.gene74221:CDS |
| GTTGAAGTGACTTCTCGTGG+AGG | 0.634997 | 1.2:-86264928 | MS.gene74221:CDS |
| GGCAGGATCTCAGGTTGTCG+GGG | 0.638448 | 1.2:-86262376 | MS.gene74221:CDS |
| TGCAGGATTCCTGTTATTGG+GGG | 0.639336 | 1.2:-86264979 | MS.gene74221:intron |
| AAGCCGTGAAGGACAAAGAG+AGG | 0.641251 | 1.2:-86261670 | MS.gene74221:CDS |
| ATTGGTTCGGAGAAACTCAA+AGG | 0.644223 | 1.2:-86262309 | MS.gene74221:CDS |
| GCGACGATGGACACCGACAG+AGG | 0.659779 | 1.2:+86262209 | None:intergenic |
| TACTGACATGTTGAATGCTG+AGG | 0.661079 | 1.2:-86261552 | MS.gene74221:CDS |
| GAGAAGTCACTTCAACAAAG+AGG | 0.662036 | 1.2:+86264935 | None:intergenic |
| ACTTGGTGCCCATGAGAGTG+TGG | 0.664789 | 1.2:+86265187 | None:intergenic |
| ACGATGGACACCGACAGAGG+CGG | 0.677611 | 1.2:+86262212 | None:intergenic |
| GCAAAGCAAAGACCTTCAGG+CGG | 0.704080 | 1.2:+86264167 | None:intergenic |
| TAGGTGAAGGATATTCACCA+TGG | 0.732815 | 1.2:+86265271 | None:intergenic |
| AGGCTAAAACCTCTTCACCG+AGG | 0.737163 | 1.2:-86262090 | MS.gene74221:CDS |
| GTTAGCAGGAACACTATGGT+GGG | 0.739497 | 1.2:+86262245 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAACATACAAAAGATT+AGG | + | chr1.2:86264248-86264267 | None:intergenic | 15.0% |
| !! | ATAAACAATACTAGTTATTA+TGG | + | chr1.2:86264326-86264345 | None:intergenic | 15.0% |
| !!! | AATAATAGATTTGTTCATAA+TGG | + | chr1.2:86262338-86262357 | None:intergenic | 15.0% |
| !!! | GATTATAATTTCAATTTTGT+TGG | - | chr1.2:86261868-86261887 | MS.gene74221:intron | 15.0% |
| !!! | TTAGTAGTTAATCTTATTTT+GGG | + | chr1.2:86262622-86262641 | None:intergenic | 15.0% |
| !!! | TTTACTTTTATTTTAAGATG+TGG | - | chr1.2:86261641-86261660 | MS.gene74221:CDS | 15.0% |
| !!! | TTTGTTTTTGAGAATATTTT+AGG | - | chr1.2:86262669-86262688 | MS.gene74221:intron | 15.0% |
| !! | AGATCATTAAAGATAGAAAA+TGG | - | chr1.2:86262226-86262245 | MS.gene74221:CDS | 20.0% |
| !! | ATAAATTGGAAATTTCACTA+TGG | - | chr1.2:86262448-86262467 | MS.gene74221:intron | 20.0% |
| !! | ATTATGAGCTTACATTTAAT+GGG | - | chr1.2:86263471-86263490 | MS.gene74221:intron | 20.0% |
| !! | CAATCCTATATTAAGTTTAA+AGG | + | chr1.2:86264106-86264125 | None:intergenic | 20.0% |
| !! | TATGTTTAAATTGATGGAAA+GGG | - | chr1.2:86262693-86262712 | MS.gene74221:intron | 20.0% |
| !! | TATTATGAGCTTACATTTAA+TGG | - | chr1.2:86263470-86263489 | MS.gene74221:intron | 20.0% |
| !! | TCAATTCTCAAATAATGAAA+TGG | - | chr1.2:86263079-86263098 | MS.gene74221:intron | 20.0% |
| !! | TCATTATTTGAGAATTGAAA+TGG | + | chr1.2:86263077-86263096 | None:intergenic | 20.0% |
| !! | TTAGGTTATGTTTAAATTGA+TGG | - | chr1.2:86262687-86262706 | MS.gene74221:intron | 20.0% |
| !! | TTATGTTTAAATTGATGGAA+AGG | - | chr1.2:86262692-86262711 | MS.gene74221:intron | 20.0% |
| !! | TTCCAATTTATACATTAGAA+GGG | + | chr1.2:86262439-86262458 | None:intergenic | 20.0% |
| !! | TTGCAATTACAAAAAACATT+TGG | - | chr1.2:86261744-86261763 | MS.gene74221:intron | 20.0% |
| !! | TTTCCAATTTATACATTAGA+AGG | + | chr1.2:86262440-86262459 | None:intergenic | 20.0% |
| !!! | ATTCTTTTGAATCATAACTT+TGG | - | chr1.2:86262144-86262163 | MS.gene74221:CDS | 20.0% |
| !!! | GTTAGTAGTTAATCTTATTT+TGG | + | chr1.2:86262623-86262642 | None:intergenic | 20.0% |
| !!! | TAGTTTTCAATCTAGATATA+TGG | - | chr1.2:86263203-86263222 | MS.gene74221:intron | 20.0% |
| ! | AAACAATCAAACAATGGAAT+AGG | - | chr1.2:86263120-86263139 | MS.gene74221:intron | 25.0% |
| ! | AAATAGAAAGAATGGTTAAC+AGG | + | chr1.2:86264214-86264233 | None:intergenic | 25.0% |
| ! | AACAATCAAACAATGGAATA+GGG | - | chr1.2:86263121-86263140 | MS.gene74221:intron | 25.0% |
| ! | AATAGAAAGAATGGTTAACA+GGG | + | chr1.2:86264213-86264232 | None:intergenic | 25.0% |
| ! | AATTCGTAGTTTATAAATCC+AGG | + | chr1.2:86261605-86261624 | None:intergenic | 25.0% |
| ! | ACATTTATCACTAAATCTCT+CGG | + | chr1.2:86264079-86264098 | None:intergenic | 25.0% |
| ! | ATAACAGTAAGAGAAGTTAT+AGG | + | chr1.2:86264298-86264317 | None:intergenic | 25.0% |
| ! | ATGTTTAAATTGATGGAAAG+GGG | - | chr1.2:86262694-86262713 | MS.gene74221:intron | 25.0% |
| ! | ATTCGTAGTTTATAAATCCA+GGG | + | chr1.2:86261604-86261623 | None:intergenic | 25.0% |
| ! | ATTGTTTGATTGTTTCATTG+AGG | + | chr1.2:86263115-86263134 | None:intergenic | 25.0% |
| ! | CTATTTAACGATTAGAGAAA+TGG | + | chr1.2:86263186-86263205 | None:intergenic | 25.0% |
| ! | TAAGTAATCTCTAATCTATC+TGG | - | chr1.2:86264873-86264892 | MS.gene74221:intron | 25.0% |
| ! | TAATATAGTATCTTTCTCCT+AGG | - | chr1.2:86263243-86263262 | MS.gene74221:intron | 25.0% |
| ! | TATTTGAGAATTGAAATGGT+AGG | + | chr1.2:86263073-86263092 | None:intergenic | 25.0% |
| ! | TCAAATTTCACTACTCTATA+GGG | + | chr1.2:86262927-86262946 | None:intergenic | 25.0% |
| ! | TCAATGAAACAATCAAACAA+TGG | - | chr1.2:86263114-86263133 | MS.gene74221:intron | 25.0% |
| ! | TCCAATTTATACATTAGAAG+GGG | + | chr1.2:86262438-86262457 | None:intergenic | 25.0% |
| ! | TCCACCTTTAAACTTAATAT+AGG | - | chr1.2:86264099-86264118 | MS.gene74221:intron | 25.0% |
| ! | TCCTATATTAAGTTTAAAGG+TGG | + | chr1.2:86264103-86264122 | None:intergenic | 25.0% |
| ! | TCTTGATAAACCTTAAATGT+TGG | + | chr1.2:86265062-86265081 | None:intergenic | 25.0% |
| ! | TGCAAAGTTATACAAGTAAA+TGG | + | chr1.2:86261729-86261748 | None:intergenic | 25.0% |
| ! | TTCAAATTTCACTACTCTAT+AGG | + | chr1.2:86262928-86262947 | None:intergenic | 25.0% |
| !! | AAAGTACTAGAGTGAAAATT+GGG | - | chr1.2:86263925-86263944 | MS.gene74221:intron | 25.0% |
| !! | ACTGATAATGTCCAAAATAT+AGG | - | chr1.2:86261938-86261957 | MS.gene74221:intron | 25.0% |
| !! | AGGTAAGTCAATTTTATCAA+TGG | + | chr1.2:86263053-86263072 | None:intergenic | 25.0% |
| !! | AGTTTTCAATTTTCCATCAA+CGG | - | chr1.2:86262263-86262282 | MS.gene74221:CDS | 25.0% |
| !! | ATGATTTTCCATGACTTAAT+CGG | - | chr1.2:86263267-86263286 | MS.gene74221:intron | 25.0% |
| !! | GTTAACCATTCTTTCTATTT+TGG | - | chr1.2:86264214-86264233 | MS.gene74221:CDS | 25.0% |
| !! | TAAGTCAATTTTATCAATGG+AGG | + | chr1.2:86263050-86263069 | None:intergenic | 25.0% |
| !! | TGATGGTCTTTTAAATCTAT+TGG | - | chr1.2:86263304-86263323 | MS.gene74221:intron | 25.0% |
| !! | TGCTATTTAGTACAAAATAG+CGG | - | chr1.2:86262971-86262990 | MS.gene74221:intron | 25.0% |
| !! | TGTAAGATTTGTGCTATTAT+AGG | + | chr1.2:86263834-86263853 | None:intergenic | 25.0% |
| !! | TTAACACATCTTTTATGAGT+TGG | - | chr1.2:86264767-86264786 | MS.gene74221:intron | 25.0% |
| !! | TTCAATTTCCTTTTTCTTAG+TGG | + | chr1.2:86262645-86262664 | None:intergenic | 25.0% |
| !!! | AAAAGTACTAGAGTGAAAAT+TGG | - | chr1.2:86263924-86263943 | MS.gene74221:intron | 25.0% |
| !!! | AACATTTGGAATTTTATTGC+AGG | - | chr1.2:86261758-86261777 | MS.gene74221:intron | 25.0% |
| !!! | AAGGAAGTTTTGTTTTCATT+TGG | + | chr1.2:86263722-86263741 | None:intergenic | 25.0% |
| !!! | ACATTTTAAGTTTAGTATCG+TGG | - | chr1.2:86263851-86263870 | MS.gene74221:intron | 25.0% |
| !!! | ATTCTTTCTATTTTGGAAGT+GGG | - | chr1.2:86264221-86264240 | MS.gene74221:CDS | 25.0% |
| !!! | CTCTAATTTTTAAAGCTTCT+GGG | + | chr1.2:86264915-86264934 | None:intergenic | 25.0% |
| !!! | GTCCTTTTGATGATAAAATA+AGG | + | chr1.2:86263425-86263444 | None:intergenic | 25.0% |
| !!! | TAGGTAAATGTTAGTTTTCA+AGG | - | chr1.2:86263583-86263602 | MS.gene74221:intron | 25.0% |
| !!! | TCTAATTTTTAAAGCTTCTG+GGG | + | chr1.2:86264914-86264933 | None:intergenic | 25.0% |
| !!! | TCTCTAATTTTTAAAGCTTC+TGG | + | chr1.2:86264916-86264935 | None:intergenic | 25.0% |
| !!! | TGCCTTATTTTATCATCAAA+AGG | - | chr1.2:86263420-86263439 | MS.gene74221:intron | 25.0% |
| AAAGGATATTCCAATAGTCA+GGG | - | chr1.2:86264029-86264048 | MS.gene74221:intron | 30.0% | |
| AAATTAGAGAATGATAGCTC+AGG | - | chr1.2:86264926-86264945 | MS.gene74221:CDS | 30.0% | |
| AAATTGTATCCACTTCTGTT+TGG | + | chr1.2:86264622-86264641 | None:intergenic | 30.0% | |
| AAGCTCAGATATGCATTATT+TGG | - | chr1.2:86264995-86265014 | MS.gene74221:intron | 30.0% | |
| AAGTACTAGAGTGAAAATTG+GGG | - | chr1.2:86263926-86263945 | MS.gene74221:intron | 30.0% | |
| AATTAGAGAATGATAGCTCA+GGG | - | chr1.2:86264927-86264946 | MS.gene74221:CDS | 30.0% | |
| ACGAATTAGATATTGTGACT+TGG | - | chr1.2:86261618-86261637 | MS.gene74221:CDS | 30.0% | |
| ACTACTAACCACTAAGAAAA+AGG | - | chr1.2:86262634-86262653 | MS.gene74221:intron | 30.0% | |
| ATTGATGGGAAATTTGATAG+TGG | - | chr1.2:86264403-86264422 | MS.gene74221:CDS | 30.0% | |
| CAATAGTTCTTAGACCAAAT+AGG | + | chr1.2:86264845-86264864 | None:intergenic | 30.0% | |
| CACTTCCAAAATAGAAAGAA+TGG | + | chr1.2:86264222-86264241 | None:intergenic | 30.0% | |
| CATTAAGATGAATGAGTTGT+CGG | - | chr1.2:86263882-86263901 | MS.gene74221:intron | 30.0% | |
| GGTTAAAAACTATAGAGATG+TGG | + | chr1.2:86262794-86262813 | None:intergenic | 30.0% | |
| GTATAGGGTTTGATATATGT+TGG | - | chr1.2:86264171-86264190 | MS.gene74221:intron | 30.0% | |
| TAAAAACTATAGAGATGTGG+TGG | + | chr1.2:86262791-86262810 | None:intergenic | 30.0% | |
| TAAAGGATATTCCAATAGTC+AGG | - | chr1.2:86264028-86264047 | MS.gene74221:intron | 30.0% | |
| TAATTAACAACAGTAGGGTA+GGG | + | chr1.2:86262883-86262902 | None:intergenic | 30.0% | |
| TATCTAGTTACTGTCACAAT+TGG | - | chr1.2:86264427-86264446 | MS.gene74221:CDS | 30.0% | |
| TGATGACTATGAAGATGATA+AGG | - | chr1.2:86265268-86265287 | MS.gene74221:CDS | 30.0% | |
| TGTATATTCCGATTAAGTCA+TGG | + | chr1.2:86263278-86263297 | None:intergenic | 30.0% | |
| TTAGAGAAATGGAATCAGAA+AGG | + | chr1.2:86263175-86263194 | None:intergenic | 30.0% | |
| TTGTTAATTAGTGGCTACAT+CGG | - | chr1.2:86262893-86262912 | MS.gene74221:intron | 30.0% | |
| ! | ATTTTGTTGGTATGAATGCA+TGG | - | chr1.2:86261881-86261900 | MS.gene74221:intron | 30.0% |
| ! | CGGAATATACATGATTTTGA+TGG | - | chr1.2:86263287-86263306 | MS.gene74221:intron | 30.0% |
| ! | CTCTATAGTTTTTAACCTGT+CGG | - | chr1.2:86262797-86262816 | MS.gene74221:intron | 30.0% |
| ! | TCTATAGTTTTTAACCTGTC+GGG | - | chr1.2:86262798-86262817 | MS.gene74221:intron | 30.0% |
| ! | TTAAGTTGCACCAACATTTA+AGG | - | chr1.2:86265049-86265068 | MS.gene74221:intron | 30.0% |
| ! | TTGTTTGGATTGTCTGAAAT+AGG | - | chr1.2:86262728-86262747 | MS.gene74221:intron | 30.0% |
| !! | CATTCTTTCTATTTTGGAAG+TGG | - | chr1.2:86264220-86264239 | MS.gene74221:CDS | 30.0% |
| !!! | ATTATTTTAAAGCTCGCAAC+TGG | - | chr1.2:86262352-86262371 | MS.gene74221:CDS | 30.0% |
| !!! | CTAATTTTTAAAGCTTCTGG+GGG | + | chr1.2:86264913-86264932 | None:intergenic | 30.0% |
| !!! | TTTGGTTTTTCCTACATGTT+TGG | - | chr1.2:86262162-86262181 | MS.gene74221:CDS | 30.0% |
| AACGAGAGTTGACTAGATAA+AGG | - | chr1.2:86264011-86264030 | MS.gene74221:intron | 35.0% | |
| AAGCTAAGTATGAAGAGCTT+GGG | + | chr1.2:86261538-86261557 | None:intergenic | 35.0% | |
| AATTAACAACAGTAGGGTAG+GGG | + | chr1.2:86262882-86262901 | None:intergenic | 35.0% | |
| ACCCTACTGTTGTTAATTAG+TGG | - | chr1.2:86262884-86262903 | MS.gene74221:intron | 35.0% | |
| AGCAAGAAACTCACAGATTA+TGG | - | chr1.2:86263786-86263805 | MS.gene74221:intron | 35.0% | |
| AGCCACTAATTAACAACAGT+AGG | + | chr1.2:86262889-86262908 | None:intergenic | 35.0% | |
| AGTCATGGAAAATCATTCCT+AGG | + | chr1.2:86263263-86263282 | None:intergenic | 35.0% | |
| AGTGATACAGTTACCTTATC+TGG | - | chr1.2:86262189-86262208 | MS.gene74221:CDS | 35.0% | |
| AGTTACTGTCACAATTGGTT+CGG | - | chr1.2:86264432-86264451 | MS.gene74221:CDS | 35.0% | |
| ATATCAAACCCTATACCACT+AGG | + | chr1.2:86264167-86264186 | None:intergenic | 35.0% | |
| ATCACTACAACCAAACATGT+AGG | + | chr1.2:86262175-86262194 | None:intergenic | 35.0% | |
| ATGAGCTTACATTTAATGGG+TGG | - | chr1.2:86263474-86263493 | MS.gene74221:intron | 35.0% | |
| ATTGCAGGATTCCTGTTATT+GGG | - | chr1.2:86261773-86261792 | MS.gene74221:intron | 35.0% | |
| CAAGACAGATTAACCAGATA+AGG | + | chr1.2:86262205-86262224 | None:intergenic | 35.0% | |
| CTAATTAACAACAGTAGGGT+AGG | + | chr1.2:86262884-86262903 | None:intergenic | 35.0% | |
| CTATGAAGATGATAAGGTGA+AGG | - | chr1.2:86265274-86265293 | MS.gene74221:CDS | 35.0% | |
| CTGAATCAGAAAAAGCAGTA+AGG | - | chr1.2:86264737-86264756 | MS.gene74221:intron | 35.0% | |
| CTGCATATTCACACAATGTT+TGG | + | chr1.2:86261916-86261935 | None:intergenic | 35.0% | |
| GATCATTCTTCAACTTCTCA+CGG | + | chr1.2:86265133-86265152 | None:intergenic | 35.0% | |
| GATTGTTTCATTGAGGAACT+AGG | + | chr1.2:86263108-86263127 | None:intergenic | 35.0% | |
| GCCACTAATTAACAACAGTA+GGG | + | chr1.2:86262888-86262907 | None:intergenic | 35.0% | |
| GCCCCTTCTAATGTATAAAT+TGG | - | chr1.2:86262434-86262453 | MS.gene74221:intron | 35.0% | |
| GTATGTGAAAACTGCATCTT+TGG | + | chr1.2:86262515-86262534 | None:intergenic | 35.0% | |
| TAAATCTCTCGGTACTAGTT+TGG | + | chr1.2:86264068-86264087 | None:intergenic | 35.0% | |
| TAGCTCAGGGATTAAATTAC+AGG | - | chr1.2:86264940-86264959 | MS.gene74221:CDS | 35.0% | |
| TATTGAAAAACCATCTCCCT+CGG | + | chr1.2:86263565-86263584 | None:intergenic | 35.0% | |
| TATTGCAGGATTCCTGTTAT+TGG | - | chr1.2:86261772-86261791 | MS.gene74221:intron | 35.0% | |
| TCGTTACTAGTACTTACACA+TGG | + | chr1.2:86263996-86264015 | None:intergenic | 35.0% | |
| TGGAGGATCAAGAAAAATAG+CGG | + | chr1.2:86263033-86263052 | None:intergenic | 35.0% | |
| TGTAGTTCCAATGAACATAC+CGG | + | chr1.2:86262391-86262410 | None:intergenic | 35.0% | |
| TTATCAAGATAAAGCCGTGA+AGG | - | chr1.2:86265073-86265092 | MS.gene74221:intron | 35.0% | |
| TTGTAAGACGTCACAATGTT+TGG | - | chr1.2:86263619-86263638 | MS.gene74221:intron | 35.0% | |
| TTGTCGGACAATATAGTACT+AGG | - | chr1.2:86263898-86263917 | MS.gene74221:intron | 35.0% | |
| TTTAACTGTTGAAAGACAGC+TGG | + | chr1.2:86262554-86262573 | None:intergenic | 35.0% | |
| ! | ACATAATTTGTCATCGTGCA+CGG | + | chr1.2:86263397-86263416 | None:intergenic | 35.0% |
| ! | AGAGAGGTACATAACAGAAA+TGG | - | chr1.2:86265100-86265119 | MS.gene74221:intron | 35.0% |
| ! | ATTGTCTGAAATAGGATGTG+AGG | - | chr1.2:86262736-86262755 | MS.gene74221:intron | 35.0% |
| ! | TGAGCTTACATTTAATGGGT+GGG | - | chr1.2:86263475-86263494 | MS.gene74221:intron | 35.0% |
| ! | TGCTGTTTGTACTAATGTCA+GGG | - | chr1.2:86262412-86262431 | MS.gene74221:intron | 35.0% |
| ! | TTGTGCTATTATAGGATCAC+AGG | + | chr1.2:86263826-86263845 | None:intergenic | 35.0% |
| ! | TTTTAACCTGTCGGGATATT+GGG | - | chr1.2:86262806-86262825 | MS.gene74221:intron | 35.0% |
| ! | TTTTTAACCTGTCGGGATAT+TGG | - | chr1.2:86262805-86262824 | MS.gene74221:intron | 35.0% |
| !! | GAAGGAGAAAGATTTTAGTG+TGG | - | chr1.2:86265292-86265311 | MS.gene74221:CDS | 35.0% |
| !! | TATCCACTTCTGTTTGGTTT+TGG | + | chr1.2:86264616-86264635 | None:intergenic | 35.0% |
| !! | TTAGTTTTCAAGGTTTGCTC+AGG | - | chr1.2:86263593-86263612 | MS.gene74221:intron | 35.0% |
| !! | TTGCTGTTTGTACTAATGTC+AGG | - | chr1.2:86262411-86262430 | MS.gene74221:intron | 35.0% |
| !!! | ATCCACTTCTGTTTGGTTTT+GGG | + | chr1.2:86264615-86264634 | None:intergenic | 35.0% |
| !!! | CTTACTGCTTTTTCTGATTC+AGG | + | chr1.2:86264739-86264758 | None:intergenic | 35.0% |
| AAAGCAAAGCAAAGACCTTC+AGG | + | chr1.2:86262593-86262612 | None:intergenic | 40.0% | |
| AACTGGACCAATACAACTTC+CGG | - | chr1.2:86262369-86262388 | MS.gene74221:CDS | 40.0% | |
| AACTTCCTTCTAAGCAGCTT+AGG | - | chr1.2:86263733-86263752 | MS.gene74221:intron | 40.0% | |
| AATGCATATCTGAGCTTCTG+CGG | + | chr1.2:86264992-86265011 | None:intergenic | 40.0% | |
| ACAACTTCCGGTATGTTCAT+TGG | - | chr1.2:86262381-86262400 | MS.gene74221:CDS | 40.0% | |
| AGGTAAGAGCAGGATAGTTT+AGG | + | chr1.2:86264825-86264844 | None:intergenic | 40.0% | |
| ATTAACAACAGTAGGGTAGG+GGG | + | chr1.2:86262881-86262900 | None:intergenic | 40.0% | |
| ATTCACACAATGTTTGGCGT+CGG | + | chr1.2:86261910-86261929 | None:intergenic | 40.0% | |
| CAAGCTAAGTATGAAGAGCT+TGG | + | chr1.2:86261539-86261558 | None:intergenic | 40.0% | |
| CAAGCTCTTCATACTTAGCT+TGG | - | chr1.2:86261537-86261556 | MS.gene74221:CDS | 40.0% | |
| CAATCCATTGCAAAATCCGA+GGG | - | chr1.2:86263546-86263565 | MS.gene74221:intron | 40.0% | |
| CAATGGTCCTACTAATCTCT+CGG | + | chr1.2:86264696-86264715 | None:intergenic | 40.0% | |
| CTATCCTGCTCTTACCTATT+TGG | - | chr1.2:86264828-86264847 | MS.gene74221:intron | 40.0% | |
| CTCAAAGCTGTCTCTTTCAT+GGG | + | chr1.2:86261463-86261482 | None:intergenic | 40.0% | |
| GAACATACCGGAAGTTGTAT+TGG | + | chr1.2:86262379-86262398 | None:intergenic | 40.0% | |
| GAGAAGTCACTTCAACAAAG+AGG | + | chr1.2:86261822-86261841 | None:intergenic | 40.0% | |
| GCATTCAACATGTCAGTATC+TGG | + | chr1.2:86265200-86265219 | None:intergenic | 40.0% | |
| GGAGGATCAAGAAAAATAGC+GGG | + | chr1.2:86263032-86263051 | None:intergenic | 40.0% | |
| GTCCAAAATATAGGACACTG+AGG | - | chr1.2:86261947-86261966 | MS.gene74221:intron | 40.0% | |
| GTGGATTCATTGCCTGTTAT+GGG | - | chr1.2:86265311-86265330 | MS.gene74221:CDS | 40.0% | |
| TACTGACATGTTGAATGCTG+AGG | - | chr1.2:86265202-86265221 | MS.gene74221:CDS | 40.0% | |
| TAGACCAAATAGGTAAGAGC+AGG | + | chr1.2:86264835-86264854 | None:intergenic | 40.0% | |
| TAGGTGAAGGATATTCACCA+TGG | + | chr1.2:86261486-86261505 | None:intergenic | 40.0% | |
| TCATATGTTGCCATAGGTGA+AGG | + | chr1.2:86261499-86261518 | None:intergenic | 40.0% | |
| TGGTGAATATCCTTCACCTA+TGG | - | chr1.2:86261486-86261505 | MS.gene74221:CDS | 40.0% | |
| TGTGGATTCATTGCCTGTTA+TGG | - | chr1.2:86265310-86265329 | MS.gene74221:CDS | 40.0% | |
| TGTTGTTAGCAGGAACACTA+TGG | + | chr1.2:86264516-86264535 | None:intergenic | 40.0% | |
| TTACACCTAAGCTGCTTAGA+AGG | + | chr1.2:86263741-86263760 | None:intergenic | 40.0% | |
| TTCACCTATGGCAACATATG+AGG | - | chr1.2:86261498-86261517 | MS.gene74221:CDS | 40.0% | |
| TTGCAGGATTCCTGTTATTG+GGG | - | chr1.2:86261774-86261793 | MS.gene74221:intron | 40.0% | |
| TTTAACCTGTCGGGATATTG+GGG | - | chr1.2:86262807-86262826 | MS.gene74221:intron | 40.0% | |
| TTTGTTGAAGTGACTTCTCG+TGG | - | chr1.2:86261823-86261842 | MS.gene74221:intron | 40.0% | |
| ! | AACATGTCAGTATCTGGTTC+AGG | + | chr1.2:86265194-86265213 | None:intergenic | 40.0% |
| ! | ACTTTTGTCACCCTGACTAT+TGG | + | chr1.2:86264042-86264061 | None:intergenic | 40.0% |
| ! | CAAATGCTTCTTTTGTGCTG+CGG | - | chr1.2:86262289-86262308 | MS.gene74221:CDS | 40.0% |
| ! | CTATAGAGATGTGGTGGAAA+TGG | + | chr1.2:86262785-86262804 | None:intergenic | 40.0% |
| ! | GAGCTTACATTTAATGGGTG+GGG | - | chr1.2:86263476-86263495 | MS.gene74221:intron | 40.0% |
| !! | ATTGGTTCGGAGAAACTCAA+AGG | - | chr1.2:86264445-86264464 | MS.gene74221:CDS | 40.0% |
| !! | GAGGGAGATGGTTTTTCAAT+AGG | - | chr1.2:86263564-86263583 | MS.gene74221:intron | 40.0% |
| AAGACAGCTGGTTGAACTTG+TGG | + | chr1.2:86262542-86262561 | None:intergenic | 45.0% | |
| AATTCCCTTCCCCCAATAAC+AGG | + | chr1.2:86261787-86261806 | None:intergenic | 45.0% | |
| ACCTATGGCAACATATGAGG+AGG | - | chr1.2:86261501-86261520 | MS.gene74221:CDS | 45.0% | |
| ACCTCCTCATATGTTGCCAT+AGG | + | chr1.2:86261505-86261524 | None:intergenic | 45.0% | |
| ATTGCAAAATCCGAGGGAGA+TGG | - | chr1.2:86263552-86263571 | MS.gene74221:intron | 45.0% | |
| CAACACCACCTAGTGGTATA+GGG | - | chr1.2:86264156-86264175 | MS.gene74221:intron | 45.0% | |
| CACCCAAAACCAAACAGAAG+TGG | - | chr1.2:86264610-86264629 | MS.gene74221:intron | 45.0% | |
| CGAGAGATTAGTAGGACCAT+TGG | - | chr1.2:86264694-86264713 | MS.gene74221:intron | 45.0% | |
| CTCAGCAATGGGATCATCTT+CGG | - | chr1.2:86264357-86264376 | MS.gene74221:intron | 45.0% | |
| CTTGTTCCAGAGTTCACCAA+TGG | + | chr1.2:86264713-86264732 | None:intergenic | 45.0% | |
| GAGCAGGATAGTTTAGGAAC+TGG | + | chr1.2:86264819-86264838 | None:intergenic | 45.0% | |
| GATTCCTGTTATTGGGGGAA+GGG | - | chr1.2:86261780-86261799 | MS.gene74221:intron | 45.0% | |
| GCAATCCATTGCAAAATCCG+AGG | - | chr1.2:86263545-86263564 | MS.gene74221:intron | 45.0% | |
| GCTCAAAGCTGTCTCTTTCA+TGG | + | chr1.2:86261464-86261483 | None:intergenic | 45.0% | |
| GCTGTCTCTTTCATGGGTAA+TGG | + | chr1.2:86261457-86261476 | None:intergenic | 45.0% | |
| GGGGTGTAGTTGCAATTGTT+TGG | - | chr1.2:86262713-86262732 | MS.gene74221:intron | 45.0% | |
| GTACCTCTCTTTGTCCTTCA+CGG | + | chr1.2:86265090-86265109 | None:intergenic | 45.0% | |
| GTTAGCAGGAACACTATGGT+GGG | + | chr1.2:86264512-86264531 | None:intergenic | 45.0% | |
| TCAAACCCTATACCACTAGG+TGG | + | chr1.2:86264164-86264183 | None:intergenic | 45.0% | |
| TCAACACCACCTAGTGGTAT+AGG | - | chr1.2:86264155-86264174 | MS.gene74221:intron | 45.0% | |
| TCAGGAAATCGCTGTTGAAG+TGG | + | chr1.2:86265176-86265195 | None:intergenic | 45.0% | |
| TCATTGCCTGTTATGGGAGT+TGG | - | chr1.2:86265317-86265336 | MS.gene74221:CDS | 45.0% | |
| TCTCTGATTTCTTCCTGCGT+CGG | + | chr1.2:86264570-86264589 | None:intergenic | 45.0% | |
| TCTCTTGTGCTCTCAGCAAT+GGG | - | chr1.2:86264346-86264365 | MS.gene74221:intron | 45.0% | |
| TCTTTGCAGAACAGCATCCA+AGG | - | chr1.2:86264644-86264663 | MS.gene74221:intron | 45.0% | |
| TGCAGGATTCCTGTTATTGG+GGG | - | chr1.2:86261775-86261794 | MS.gene74221:intron | 45.0% | |
| TGTTAGCAGGAACACTATGG+TGG | + | chr1.2:86264513-86264532 | None:intergenic | 45.0% | |
| TGTTATTGGGGGAAGGGAAT+TGG | - | chr1.2:86261786-86261805 | MS.gene74221:intron | 45.0% | |
| TTAACCTGTCGGGATATTGG+GGG | - | chr1.2:86262808-86262827 | MS.gene74221:intron | 45.0% | |
| TTCTCTTGTGCTCTCAGCAA+TGG | - | chr1.2:86264345-86264364 | MS.gene74221:intron | 45.0% | |
| TTGAAGTGACTTCTCGTGGA+GGG | - | chr1.2:86261827-86261846 | MS.gene74221:intron | 45.0% | |
| ! | ATCTCCCTCGGATTTTGCAA+TGG | + | chr1.2:86263553-86263572 | None:intergenic | 45.0% |
| ! | CGCCTCAGTGTCCTATATTT+TGG | + | chr1.2:86261952-86261971 | None:intergenic | 45.0% |
| ! | GAAGCATTTGTAGCCGTTGA+TGG | + | chr1.2:86262279-86262298 | None:intergenic | 45.0% |
| !! | AAAGAGACAGCTTTGAGCCA+TGG | - | chr1.2:86261466-86261485 | MS.gene74221:CDS | 45.0% |
| !! | GAAAACTGCATCTTTGGAGC+AGG | + | chr1.2:86262509-86262528 | None:intergenic | 45.0% |
| !! | TAAATGAAAAATTATAATAA+TGG | - | chr1.2:86263689-86263708 | MS.gene74221:intron | 5.0% |
| AAAACCTCTTCACCGAGGGA+AGG | - | chr1.2:86264669-86264688 | MS.gene74221:intron | 50.0% | |
| AAGCCGTGAAGGACAAAGAG+AGG | - | chr1.2:86265084-86265103 | MS.gene74221:intron | 50.0% | |
| AGGCTAAAACCTCTTCACCG+AGG | - | chr1.2:86264664-86264683 | MS.gene74221:intron | 50.0% | |
| AGGTTGTCGGGGTCATTGAT+GGG | - | chr1.2:86264389-86264408 | MS.gene74221:CDS | 50.0% | |
| ATCATCTTCGGCAGGATCTC+AGG | - | chr1.2:86264369-86264388 | MS.gene74221:intron | 50.0% | |
| CATGGGCACCAAGTTCATGT+AGG | - | chr1.2:86261576-86261595 | MS.gene74221:CDS | 50.0% | |
| GAGAAGCTCCACACTCTCAT+GGG | - | chr1.2:86261559-86261578 | MS.gene74221:CDS | 50.0% | |
| GCAAAGCAAAGACCTTCAGG+CGG | + | chr1.2:86262590-86262609 | None:intergenic | 50.0% | |
| GGAAGGACCGAGAGATTAGT+AGG | - | chr1.2:86264686-86264705 | MS.gene74221:intron | 50.0% | |
| GGATTCCTGTTATTGGGGGA+AGG | - | chr1.2:86261779-86261798 | MS.gene74221:intron | 50.0% | |
| GGCAGACTCTCTTCAAACTC+CGG | - | chr1.2:86265223-86265242 | MS.gene74221:CDS | 50.0% | |
| GGCTAAAACCTCTTCACCGA+GGG | - | chr1.2:86264665-86264684 | MS.gene74221:intron | 50.0% | |
| GTAGGACCATTGGTGAACTC+TGG | - | chr1.2:86264704-86264723 | MS.gene74221:intron | 50.0% | |
| GTTAATTCTGCTCCGCCTGA+AGG | - | chr1.2:86262575-86262594 | MS.gene74221:intron | 50.0% | |
| GTTGAAGTGACTTCTCGTGG+AGG | - | chr1.2:86261826-86261845 | MS.gene74221:intron | 50.0% | |
| TAACCTGTCGGGATATTGGG+GGG | - | chr1.2:86262809-86262828 | MS.gene74221:intron | 50.0% | |
| TAATCTCTCGGTCCTTCCCT+CGG | + | chr1.2:86264684-86264703 | None:intergenic | 50.0% | |
| TCAGCACCAACTCCCATAAC+AGG | + | chr1.2:86265326-86265345 | None:intergenic | 50.0% | |
| TTGCAGTCAACACCACCTAG+TGG | - | chr1.2:86264149-86264168 | MS.gene74221:intron | 50.0% | |
| !! | CGGTGAAGAGGTTTTAGCCT+TGG | + | chr1.2:86264664-86264683 | None:intergenic | 50.0% |
| !!! | CTGTTTGGTTTTGGGTGAGC+AGG | + | chr1.2:86264607-86264626 | None:intergenic | 50.0% |
| AACAACGTGACCGCCTCTGT+CGG | - | chr1.2:86264532-86264551 | MS.gene74221:intron | 55.0% | |
| CAGGTTGTCGGGGTCATTGA+TGG | - | chr1.2:86264388-86264407 | MS.gene74221:CDS | 55.0% | |
| CCAAGTTCATGTAGGCTCCC+TGG | - | chr1.2:86261584-86261603 | MS.gene74221:CDS | 55.0% | |
| CCAGGGAGCCTACATGAACT+TGG | + | chr1.2:86261587-86261606 | None:intergenic | 55.0% | |
| CCGGAGCAGAGTAGTTCAGA+CGG | - | chr1.2:86265242-86265261 | MS.gene74221:CDS | 55.0% | |
| CCGTCTGAACTACTCTGCTC+CGG | + | chr1.2:86265245-86265264 | None:intergenic | 55.0% | |
| CGGTGTGTAGACACACAGTC+AGG | + | chr1.2:86264972-86264991 | None:intergenic | 55.0% | |
| GCAATGGGATCATCTTCGGC+AGG | - | chr1.2:86264361-86264380 | MS.gene74221:intron | 55.0% | |
| GGAGAAGCTCCACACTCTCA+TGG | - | chr1.2:86261558-86261577 | MS.gene74221:CDS | 55.0% | |
| ! | GCGGTCACGTTGTTGTTAGC+AGG | + | chr1.2:86264526-86264545 | None:intergenic | 55.0% |
| ! | GCTGGCAGCACAGGATTTTG+TGG | + | chr1.2:86264487-86264506 | None:intergenic | 55.0% |
| ! | GGAACACTATGGTGGGATGC+TGG | + | chr1.2:86264505-86264524 | None:intergenic | 55.0% |
| ! | TCGGCAGGATCTCAGGTTGT+CGG | - | chr1.2:86264376-86264395 | MS.gene74221:intron | 55.0% |
| !! | ACTTGGTGCCCATGAGAGTG+TGG | + | chr1.2:86261570-86261589 | None:intergenic | 55.0% |
| !! | GCATCTTTGGAGCAGGAGCT+GGG | + | chr1.2:86262502-86262521 | None:intergenic | 55.0% |
| !! | TGCATCTTTGGAGCAGGAGC+TGG | + | chr1.2:86262503-86262522 | None:intergenic | 55.0% |
| ACGATGGACACCGACAGAGG+CGG | + | chr1.2:86264545-86264564 | None:intergenic | 60.0% | |
| TCACCCCCCAATATCCCGAC+AGG | + | chr1.2:86262815-86262834 | None:intergenic | 60.0% | |
| ! | CGGCAGGATCTCAGGTTGTC+GGG | - | chr1.2:86264377-86264396 | MS.gene74221:intron | 60.0% |
| ! | GGCAGGATCTCAGGTTGTCG+GGG | - | chr1.2:86264378-86264397 | MS.gene74221:intron | 60.0% |
| !! | CTTTGGAGCAGGAGCTGGGA+TGG | + | chr1.2:86262498-86262517 | None:intergenic | 60.0% |
| CGGTCCTTCCCTCGGTGAAG+AGG | + | chr1.2:86264676-86264695 | None:intergenic | 65.0% | |
| GCGACGATGGACACCGACAG+AGG | + | chr1.2:86264548-86264567 | None:intergenic | 65.0% | |
| TGGTGGGATGCTGGCAGCAC+AGG | + | chr1.2:86264496-86264515 | None:intergenic | 65.0% | |
| ! | TCTTCCTGCGTCGGCGACGA+TGG | + | chr1.2:86264561-86264580 | None:intergenic | 65.0% |
| GTGTCCATCGTCGCCGACGC+AGG | - | chr1.2:86264554-86264573 | MS.gene74221:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 86261424 | 86265352 | 86261424 | ID=MS.gene74221 |
| chr1.2 | mRNA | 86261424 | 86265352 | 86261424 | ID=MS.gene74221.t1;Parent=MS.gene74221 |
| chr1.2 | exon | 86265183 | 86265352 | 86265183 | ID=MS.gene74221.t1.exon1;Parent=MS.gene74221.t1 |
| chr1.2 | CDS | 86265183 | 86265352 | 86265183 | ID=cds.MS.gene74221.t1;Parent=MS.gene74221.t1 |
| chr1.2 | exon | 86264918 | 86264996 | 86264918 | ID=MS.gene74221.t1.exon2;Parent=MS.gene74221.t1 |
| chr1.2 | CDS | 86264918 | 86264996 | 86264918 | ID=cds.MS.gene74221.t1;Parent=MS.gene74221.t1 |
| chr1.2 | exon | 86264386 | 86264548 | 86264386 | ID=MS.gene74221.t1.exon3;Parent=MS.gene74221.t1 |
| chr1.2 | CDS | 86264386 | 86264548 | 86264386 | ID=cds.MS.gene74221.t1;Parent=MS.gene74221.t1 |
| chr1.2 | exon | 86264180 | 86264302 | 86264180 | ID=MS.gene74221.t1.exon4;Parent=MS.gene74221.t1 |
| chr1.2 | CDS | 86264180 | 86264302 | 86264180 | ID=cds.MS.gene74221.t1;Parent=MS.gene74221.t1 |
| chr1.2 | exon | 86262023 | 86262414 | 86262023 | ID=MS.gene74221.t1.exon5;Parent=MS.gene74221.t1 |
| chr1.2 | CDS | 86262023 | 86262414 | 86262023 | ID=cds.MS.gene74221.t1;Parent=MS.gene74221.t1 |
| chr1.2 | exon | 86261424 | 86261705 | 86261424 | ID=MS.gene74221.t1.exon6;Parent=MS.gene74221.t1 |
| chr1.2 | CDS | 86261424 | 86261705 | 86261424 | ID=cds.MS.gene74221.t1;Parent=MS.gene74221.t1 |
| Gene Sequence |
| Protein sequence |
