Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74888.t1 | XP_003590905.1 | 99.5 | 986 | 5 | 0 | 1 | 986 | 1 | 986 | 0.00E+00 | 1139.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74888.t1 | Q9M8Y0 | 87.0 | 971 | 121 | 2 | 21 | 986 | 7 | 977 | 7.3e-258 | 891.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74888.t1 | G7I5N5 | 99.5 | 986 | 5 | 0 | 1 | 986 | 1 | 986 | 0.0e+00 | 1139.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene014576 | MS.gene74888 | PPI |
| MS.gene93993 | MS.gene74888 | PPI |
| MS.gene40223 | MS.gene74888 | PPI |
| MS.gene071051 | MS.gene74888 | PPI |
| MS.gene74888 | MS.gene93890 | PPI |
| MS.gene74888 | MS.gene93994 | PPI |
| MS.gene97109 | MS.gene74888 | PPI |
| MS.gene74888 | MS.gene69092 | PPI |
| MS.gene23932 | MS.gene74888 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74888.t1 | MTR_1g079510 | 99.493 | 986 | 5 | 0 | 1 | 986 | 1 | 986 | 0.0 | 2060 |
| MS.gene74888.t1 | MTR_1g059610 | 27.607 | 815 | 511 | 14 | 178 | 970 | 96 | 853 | 1.71e-83 | 290 |
| MS.gene74888.t1 | MTR_1g059610 | 30.904 | 343 | 189 | 3 | 148 | 442 | 98 | 440 | 5.35e-40 | 160 |
| MS.gene74888.t1 | MTR_1g045490 | 23.411 | 299 | 196 | 2 | 140 | 431 | 201 | 473 | 2.97e-12 | 71.2 |
| MS.gene74888.t1 | MTR_5g016190 | 22.179 | 257 | 200 | 0 | 246 | 502 | 289 | 545 | 6.65e-11 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74888.t1 | AT3G04240 | 81.977 | 971 | 170 | 2 | 21 | 986 | 7 | 977 | 0.0 | 1709 |
| MS.gene74888.t1 | AT3G04240 | 85.081 | 744 | 111 | 0 | 243 | 986 | 1 | 744 | 0.0 | 1379 |
| MS.gene74888.t1 | AT3G04240 | 32.362 | 309 | 200 | 2 | 175 | 474 | 1 | 309 | 3.17e-41 | 163 |
| MS.gene74888.t1 | AT3G04240 | 33.103 | 290 | 194 | 0 | 74 | 363 | 2 | 291 | 1.05e-40 | 161 |
| MS.gene74888.t1 | AT3G11540 | 27.590 | 830 | 524 | 15 | 177 | 985 | 92 | 865 | 1.16e-79 | 279 |
| MS.gene74888.t1 | AT3G11540 | 31.549 | 355 | 183 | 5 | 141 | 442 | 90 | 437 | 4.53e-39 | 157 |
| MS.gene74888.t1 | AT3G11540 | 32.830 | 265 | 171 | 1 | 116 | 373 | 172 | 436 | 1.93e-34 | 142 |
| MS.gene74888.t1 | AT3G11540 | 26.480 | 321 | 213 | 5 | 239 | 545 | 50 | 361 | 1.70e-19 | 95.1 |
| MS.gene74888.t1 | AT3G11540 | 28.346 | 254 | 168 | 4 | 78 | 317 | 196 | 449 | 7.71e-19 | 92.8 |
| MS.gene74888.t1 | AT3G11540 | 28.700 | 223 | 149 | 3 | 295 | 510 | 41 | 260 | 6.54e-16 | 83.2 |
| MS.gene74888.t1 | AT3G11540 | 25.816 | 705 | 447 | 16 | 295 | 985 | 41 | 683 | 2.33e-51 | 194 |
| MS.gene74888.t1 | AT3G11540 | 31.694 | 183 | 113 | 2 | 198 | 373 | 77 | 254 | 1.39e-16 | 85.1 |
| MS.gene74888.t1 | AT3G11540 | 31.176 | 170 | 103 | 3 | 177 | 339 | 92 | 254 | 1.54e-13 | 75.5 |
| MS.gene74888.t1 | AT3G11540 | 26.540 | 211 | 143 | 2 | 239 | 442 | 50 | 255 | 8.74e-12 | 69.7 |
| MS.gene74888.t1 | AT3G11540 | 31.250 | 192 | 103 | 6 | 141 | 317 | 90 | 267 | 3.52e-11 | 67.8 |
| MS.gene74888.t1 | AT2G32450 | 28.713 | 202 | 136 | 2 | 180 | 373 | 245 | 446 | 1.24e-14 | 79.0 |
| MS.gene74888.t1 | AT2G32450 | 27.976 | 168 | 121 | 0 | 196 | 363 | 303 | 470 | 7.75e-13 | 73.2 |
| MS.gene74888.t1 | AT2G32450 | 24.481 | 241 | 174 | 1 | 199 | 431 | 230 | 470 | 9.27e-13 | 73.2 |
| MS.gene74888.t1 | AT1G05150 | 24.206 | 252 | 165 | 1 | 180 | 431 | 250 | 475 | 3.37e-13 | 74.3 |
| MS.gene74888.t1 | AT1G05150 | 25.094 | 267 | 172 | 2 | 248 | 512 | 250 | 490 | 1.32e-12 | 72.4 |
| MS.gene74888.t1 | AT5G63200 | 21.594 | 389 | 231 | 10 | 117 | 434 | 218 | 603 | 2.06e-11 | 68.6 |
Find 240 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAATCCTTATCAACCTTAA+TGG | 0.143162 | 1.1:-59091781 | MS.gene74888:CDS |
| GGCTGAAGCTCATGCTAATT+TGG | 0.170309 | 1.1:-59094610 | MS.gene74888:CDS |
| AAATGATGTTACAGGTAATT+TGG | 0.170385 | 1.1:-59095787 | MS.gene74888:intron |
| TTTGGAAGCTTACAATAATT+TGG | 0.173624 | 1.1:-59095685 | MS.gene74888:intron |
| TGACCATGCATCAGCAAAAT+TGG | 0.177023 | 1.1:+59098323 | None:intergenic |
| TACCATGTATTAAATATTTC+AGG | 0.201953 | 1.1:+59090093 | None:intergenic |
| CCACAGGAACAGATATATTA+TGG | 0.228996 | 1.1:-59089442 | MS.gene74888:CDS |
| CAATGCTTGCTCTGGAAATT+AGG | 0.230192 | 1.1:-59092420 | MS.gene74888:intron |
| ACCAGTTCAAGTTTCATATA+TGG | 0.238851 | 1.1:-59090556 | MS.gene74888:CDS |
| TACTCTGCCTCTTGAGAAAA+TGG | 0.256247 | 1.1:-59089402 | MS.gene74888:CDS |
| CTACCTTTGTATAACCATTA+AGG | 0.273432 | 1.1:+59091767 | None:intergenic |
| TAATTTGGCTTCTGCCTATA+AGG | 0.274347 | 1.1:-59094595 | MS.gene74888:CDS |
| ATTAGCATACCTATCCTTAT+AGG | 0.292089 | 1.1:+59094581 | None:intergenic |
| CCAAACTATGGCATGGCTTA+TGG | 0.303947 | 1.1:-59096581 | MS.gene74888:intron |
| TGCCGAGTGTTACGGTAATA+TGG | 0.304813 | 1.1:-59099044 | MS.gene74888:CDS |
| CATGTATATATTTCCAAGAT+TGG | 0.315239 | 1.1:+59095162 | None:intergenic |
| TAACCTCCCTCCTGCTTGAT+TGG | 0.315790 | 1.1:+59092223 | None:intergenic |
| TCAGTTAGAGCTTGAAGCTT+TGG | 0.317430 | 1.1:+59089117 | None:intergenic |
| GTTTCATATATGGGATTTCC+TGG | 0.320555 | 1.1:-59090546 | MS.gene74888:CDS |
| CCAGTTCAAGTTTCATATAT+GGG | 0.320872 | 1.1:-59090555 | MS.gene74888:CDS |
| CTCTGTATTTCCACTGGACT+GGG | 0.331322 | 1.1:-59089359 | MS.gene74888:CDS |
| AATAGTAAAATTACCATTAG+AGG | 0.332566 | 1.1:+59098222 | None:intergenic |
| AGAAGATTGCAAGTTGCTTC+AGG | 0.349834 | 1.1:+59094185 | None:intergenic |
| TCCTATGTCTATTTATCATC+TGG | 0.352528 | 1.1:+59088855 | None:intergenic |
| CTCCATTCAGTACCATCATT+TGG | 0.353434 | 1.1:+59091895 | None:intergenic |
| CAGTTAGAGCTTGAAGCTTT+GGG | 0.354805 | 1.1:+59089118 | None:intergenic |
| GATCGTTTGGGCTGACAGTT+TGG | 0.362406 | 1.1:+59090180 | None:intergenic |
| AAACAGAGGCAATACTTATA+AGG | 0.364549 | 1.1:-59094697 | MS.gene74888:CDS |
| CTTCAGACACGGCCAAACTA+TGG | 0.368387 | 1.1:-59096593 | MS.gene74888:CDS |
| CCTGATGCATACTTGAACCT+TGG | 0.368615 | 1.1:-59096769 | MS.gene74888:CDS |
| CTCTTGAAATTTCCTGCAGC+AGG | 0.374684 | 1.1:-59089922 | MS.gene74888:CDS |
| CAATCTTCTACATACACTTC+AGG | 0.378736 | 1.1:-59094171 | MS.gene74888:intron |
| CCACAAGCGTTGACCAATCT+TGG | 0.379245 | 1.1:-59095175 | MS.gene74888:CDS |
| CTTTGTAAACGATTATAAAC+AGG | 0.383696 | 1.1:-59090328 | MS.gene74888:intron |
| ATTATAGCAAGGTTGTTATA+CGG | 0.385320 | 1.1:+59094982 | None:intergenic |
| TATAACCATTAAGGTTGATA+AGG | 0.388324 | 1.1:+59091776 | None:intergenic |
| ACTTGCTATCAACCCTCTAA+TGG | 0.389345 | 1.1:-59098235 | MS.gene74888:intron |
| AAATCTTGCTGGTCTGTTCA+TGG | 0.391501 | 1.1:-59097198 | MS.gene74888:CDS |
| CAGCCCAAACGATCAGATTA+TGG | 0.392917 | 1.1:-59090171 | MS.gene74888:CDS |
| ACTCTGTATTTCCACTGGAC+TGG | 0.395288 | 1.1:-59089360 | MS.gene74888:CDS |
| ATAGGAGCAGGATGGCTAAA+TGG | 0.396060 | 1.1:+59092247 | None:intergenic |
| CCATAAGCCATGCCATAGTT+TGG | 0.399981 | 1.1:+59096581 | None:intergenic |
| CCAAGGTTCAAGTATGCATC+AGG | 0.403218 | 1.1:+59096769 | None:intergenic |
| CAAATGTTCAAGGAAGTAGA+AGG | 0.411950 | 1.1:-59092632 | MS.gene74888:CDS |
| ACATTATGAGCAAGGTCAAC+TGG | 0.412081 | 1.1:-59095757 | MS.gene74888:CDS |
| GCTGGTCTGTTCATGGAGTC+TGG | 0.413134 | 1.1:-59097191 | MS.gene74888:CDS |
| CTTCACAGATGTTGCAATGA+AGG | 0.419095 | 1.1:-59089633 | MS.gene74888:CDS |
| CTATTACTTGATTGCCATTG+AGG | 0.423798 | 1.1:-59098864 | MS.gene74888:intron |
| GAGACCATAATCTGATCGTT+TGG | 0.428281 | 1.1:+59090167 | None:intergenic |
| CTCTTGAGAAAATGGCTACT+AGG | 0.429756 | 1.1:-59089394 | MS.gene74888:CDS |
| ATTGCATGGTCAAATCTTGC+TGG | 0.431271 | 1.1:-59097209 | MS.gene74888:CDS |
| CAAGATTGGTCAACGCTTGT+GGG | 0.432953 | 1.1:+59095176 | None:intergenic |
| TTGGCTCATCCGACAGCTCT+CGG | 0.434068 | 1.1:-59099748 | MS.gene74888:CDS |
| ATGCTATGGCATGGAAAGGC+TGG | 0.434506 | 1.1:+59092455 | None:intergenic |
| ATCTGAAGCAGAGCACTTTG+TGG | 0.435992 | 1.1:-59091860 | MS.gene74888:CDS |
| CCTTGGTGCAATTTATTACC+AGG | 0.442505 | 1.1:-59099245 | MS.gene74888:intron |
| GACCATGCATCAGCAAAATT+GGG | 0.445415 | 1.1:+59098324 | None:intergenic |
| CCAAGATTGGTCAACGCTTG+TGG | 0.445603 | 1.1:+59095175 | None:intergenic |
| AAAATGGCTACTAGGGTTGC+TGG | 0.449044 | 1.1:-59089386 | MS.gene74888:CDS |
| CTGATGCATACTTGAACCTT+GGG | 0.451840 | 1.1:-59096768 | MS.gene74888:CDS |
| AACCACCACTCTCAGCTTGT+TGG | 0.452650 | 1.1:-59099767 | MS.gene74888:CDS |
| GAACGGTTCAACGCGATCTC+CGG | 0.452834 | 1.1:+59099715 | None:intergenic |
| ACCAAGGAGTAGTAAATTAT+CGG | 0.453046 | 1.1:+59099261 | None:intergenic |
| ACCTTGCTCATAATGTATAC+TGG | 0.453921 | 1.1:+59095764 | None:intergenic |
| CACAGGAACAGATATATTAT+GGG | 0.455571 | 1.1:-59089441 | MS.gene74888:CDS |
| CCCATATATGAAACTTGAAC+TGG | 0.456705 | 1.1:+59090555 | None:intergenic |
| CTTTCAGATGCTGCTGCACA+AGG | 0.457171 | 1.1:-59089677 | MS.gene74888:intron |
| GACCTCATTGTAGCAAGATA+TGG | 0.458721 | 1.1:+59094755 | None:intergenic |
| AGCAGTGTGCAGCATATTTG+CGG | 0.459706 | 1.1:+59092299 | None:intergenic |
| GGCAATACTTATAAGGAGAT+TGG | 0.459746 | 1.1:-59094690 | MS.gene74888:CDS |
| ATGGGATTTCCTGGCACAAC+CGG | 0.462984 | 1.1:-59090537 | MS.gene74888:CDS |
| CCCTCCTGCTTGATTGGAAT+AGG | 0.463550 | 1.1:+59092229 | None:intergenic |
| CGCGCTCATGATTCTAGTGA+AGG | 0.464261 | 1.1:-59099650 | MS.gene74888:intron |
| AGACCATAATCTGATCGTTT+GGG | 0.464870 | 1.1:+59090168 | None:intergenic |
| TAATGCAGTGTGTCTGTTGT+TGG | 0.467039 | 1.1:-59092667 | MS.gene74888:intron |
| CGGAATCATGATCTCCGTCC+AGG | 0.468061 | 1.1:-59099813 | None:intergenic |
| GGCTCACTCTGTATTTCCAC+TGG | 0.472212 | 1.1:-59089365 | MS.gene74888:CDS |
| CGACGACGGCTCTTGCTTAA+CGG | 0.473736 | 1.1:+59099691 | None:intergenic |
| CAAGAGCCAAAGCGCGCTGT+TGG | 0.474016 | 1.1:+59089939 | None:intergenic |
| ACTTGACCCAATGCTTGCTC+TGG | 0.474813 | 1.1:-59092428 | MS.gene74888:CDS |
| CCACACTTTGCCGAGTGTTA+CGG | 0.474939 | 1.1:-59099052 | MS.gene74888:CDS |
| AGCTCTCGGTTGCCGTTCAC+CGG | 0.478100 | 1.1:-59099734 | MS.gene74888:CDS |
| TAGAGTCAGTGATGCTATCC+AGG | 0.479729 | 1.1:-59094667 | MS.gene74888:CDS |
| CCACCCATTGTCACATCTCA+TGG | 0.482380 | 1.1:-59092062 | MS.gene74888:CDS |
| AAGAGCCAAAGCGCGCTGTT+GGG | 0.483592 | 1.1:+59089940 | None:intergenic |
| TATGAAACTTGAACTGGTGC+AGG | 0.484055 | 1.1:+59090561 | None:intergenic |
| ACCGATAATTTACTACTCCT+TGG | 0.486401 | 1.1:-59099262 | MS.gene74888:CDS |
| GTAATCTATGTATGTAGCTC+CGG | 0.486466 | 1.1:+59090518 | None:intergenic |
| GGTTATGAAAGACTAAGGAT+TGG | 0.487687 | 1.1:-59092205 | MS.gene74888:CDS |
| GGTTGATGCTCATAGTAACT+TGG | 0.496415 | 1.1:-59098048 | MS.gene74888:CDS |
| AGCTACATACATAGATTACT+TGG | 0.496829 | 1.1:-59090514 | MS.gene74888:CDS |
| CTTCAATCAACTTTACAAGA+TGG | 0.496856 | 1.1:-59090118 | MS.gene74888:CDS |
| GCATGAGCTTCAGCCATAGT+AGG | 0.497608 | 1.1:+59094618 | None:intergenic |
| CAAAGTAGCAATGCGGGAGA+TGG | 0.497765 | 1.1:+59090346 | None:intergenic |
| TAATTTCCAGAGCAAGCATT+GGG | 0.501643 | 1.1:+59092422 | None:intergenic |
| TATGTAGCTCCGGTTGTGCC+AGG | 0.502858 | 1.1:+59090528 | None:intergenic |
| GTTATGAAAGACTAAGGATT+GGG | 0.503729 | 1.1:-59092204 | MS.gene74888:intron |
| TCTGTGAAGATAATTTGATC+AGG | 0.505192 | 1.1:+59089647 | None:intergenic |
| AGTCTCATTTCTCCTGCTGC+AGG | 0.505262 | 1.1:+59089910 | None:intergenic |
| TGCTTGATTGGAATAGGAGC+AGG | 0.506321 | 1.1:+59092235 | None:intergenic |
| GGCTCTTGCTTAACGGCGAA+CGG | 0.508387 | 1.1:+59099698 | None:intergenic |
| GGTCCTCCGCATTGATCCCT+TGG | 0.509269 | 1.1:-59094736 | MS.gene74888:CDS |
| ATTGATCCCTTGGCAGCTGA+TGG | 0.509463 | 1.1:-59094726 | MS.gene74888:CDS |
| AATGCAGTGTGTCTGTTGTT+GGG | 0.510745 | 1.1:-59092666 | MS.gene74888:intron |
| GGCAGACCTTGTAATACTGC+AGG | 0.511471 | 1.1:+59097153 | None:intergenic |
| GGTAATCTAATGAAAGCTCA+AGG | 0.514812 | 1.1:-59098026 | MS.gene74888:CDS |
| TGCTATAATATATAAGCAGC+AGG | 0.515077 | 1.1:-59094968 | MS.gene74888:intron |
| GCATGGAAAGGCTGGACACT+AGG | 0.517313 | 1.1:+59092463 | None:intergenic |
| CGTTTACAAAGTAGCAATGC+GGG | 0.517564 | 1.1:+59090340 | None:intergenic |
| TAATCGCACGTATGTAATCC+TGG | 0.519833 | 1.1:+59094649 | None:intergenic |
| CAATCTTGGAAATATATACA+TGG | 0.519958 | 1.1:-59095161 | MS.gene74888:CDS |
| TGCTATCGTATCTGATGTCA+TGG | 0.520898 | 1.1:+59091828 | None:intergenic |
| TACAAGACCATCAGCTGCCA+AGG | 0.521518 | 1.1:+59094719 | None:intergenic |
| GATTACCGTCAGGCCTACTA+TGG | 0.522671 | 1.1:-59094631 | MS.gene74888:CDS |
| ACACATTAGACGGAGTTCCT+TGG | 0.522719 | 1.1:-59089606 | MS.gene74888:CDS |
| GTGTACCCAACAGCGCGCTT+TGG | 0.522743 | 1.1:-59089945 | MS.gene74888:CDS |
| ATCAAGAATACATACCTCAA+TGG | 0.523924 | 1.1:+59098850 | None:intergenic |
| GGCAATAACGTGAGCGACGA+CGG | 0.526386 | 1.1:+59099677 | None:intergenic |
| CTAATTTCCAGAGCAAGCAT+TGG | 0.530198 | 1.1:+59092421 | None:intergenic |
| AACCTACCTTTGCTATTGCA+TGG | 0.530684 | 1.1:-59097223 | MS.gene74888:CDS |
| TTCACAGATGTTGCAATGAA+GGG | 0.531625 | 1.1:-59089632 | MS.gene74888:CDS |
| CAGAGCCCTGCAGTATTACA+AGG | 0.533229 | 1.1:-59097159 | MS.gene74888:intron |
| AGTACCATCATTTGGACTCA+AGG | 0.534981 | 1.1:+59091903 | None:intergenic |
| CTCTCTTTGACACAAACCGA+TGG | 0.535023 | 1.1:-59089065 | MS.gene74888:CDS |
| TGGCTTCTGCCTATAAGGAT+AGG | 0.535459 | 1.1:-59094590 | MS.gene74888:intron |
| TTGGAAATATATACATGGAA+TGG | 0.538270 | 1.1:-59095156 | MS.gene74888:intron |
| AGGGAGGTTATGAAAGACTA+AGG | 0.540074 | 1.1:-59092210 | MS.gene74888:CDS |
| AAGAACATACATTATAGCAC+TGG | 0.540515 | 1.1:+59095312 | None:intergenic |
| TCTTGAGAAAATGGCTACTA+GGG | 0.544333 | 1.1:-59089393 | MS.gene74888:CDS |
| ATGTGGAATCTGCATTGCTC+TGG | 0.546367 | 1.1:-59088924 | MS.gene74888:CDS |
| CTAGAATCATGAGCGCGTAA+AGG | 0.548037 | 1.1:+59099656 | None:intergenic |
| GTGGTATGTGCATTGCATAA+AGG | 0.548073 | 1.1:+59089461 | None:intergenic |
| GCCAGTATACATTATGAGCA+AGG | 0.548161 | 1.1:-59095765 | MS.gene74888:CDS |
| TTCAGATGCTGCTGCACAAG+GGG | 0.555143 | 1.1:-59089675 | MS.gene74888:intron |
| TGCTCCTATTCCAATCAAGC+AGG | 0.555496 | 1.1:-59092233 | MS.gene74888:CDS |
| ATAGTAAAATTACCATTAGA+GGG | 0.557033 | 1.1:+59098223 | None:intergenic |
| GGTAATGCTCTGAAAGATGT+TGG | 0.562829 | 1.1:-59095353 | MS.gene74888:CDS |
| ATTATGGGCAGGTCTGCCTA+TGG | 0.564345 | 1.1:-59089426 | MS.gene74888:CDS |
| GGAACAGATATATTATGGGC+AGG | 0.566521 | 1.1:-59089437 | MS.gene74888:CDS |
| TGGGTCAAGTGGATATGCTA+TGG | 0.567625 | 1.1:+59092441 | None:intergenic |
| TGCCATATTACCGTAACACT+CGG | 0.568106 | 1.1:+59099042 | None:intergenic |
| TGAGCAAGGTCAACTGGACA+TGG | 0.570022 | 1.1:-59095751 | MS.gene74888:CDS |
| AGAGCAAGCATTGGGTCAAG+TGG | 0.574030 | 1.1:+59092430 | None:intergenic |
| GGCTGTAAAGAGCTACAGAC+AGG | 0.576286 | 1.1:-59094231 | MS.gene74888:CDS |
| GCTACACTAAATGTAACCAC+TGG | 0.577805 | 1.1:-59095015 | MS.gene74888:CDS |
| ATCTGCATTGCTCTGGTCAA+CGG | 0.578259 | 1.1:-59088917 | MS.gene74888:CDS |
| TTATTTCAGTGGACATGTAG+AGG | 0.579165 | 1.1:-59094255 | MS.gene74888:intron |
| CTGTATTTCCACTGGACTGG+GGG | 0.579676 | 1.1:-59089357 | MS.gene74888:CDS |
| GGTGGTTGTAGTGGTGGCGA+TGG | 0.580159 | 1.1:+59099783 | None:intergenic |
| ATCCTGAAATATTTAATACA+TGG | 0.581813 | 1.1:-59090095 | MS.gene74888:intron |
| GGATCGTGATCAAATGTTCA+AGG | 0.582624 | 1.1:-59092642 | MS.gene74888:CDS |
| GTTGATGCTCATAGTAACTT+GGG | 0.583189 | 1.1:-59098047 | MS.gene74888:CDS |
| AAGTATGCATCAGGGAAGGA+AGG | 0.583668 | 1.1:+59096778 | None:intergenic |
| GAACCTTGGGAATGTATACA+AGG | 0.587196 | 1.1:-59096755 | MS.gene74888:intron |
| TACGCATGTATGCACTAGCT+AGG | 0.587484 | 1.1:+59098298 | None:intergenic |
| GGGACGAGATGATTGTCAGC+AGG | 0.587594 | 1.1:-59089337 | MS.gene74888:intron |
| GCTAGTGCATACATGCGTAA+AGG | 0.588429 | 1.1:-59098294 | MS.gene74888:CDS |
| GGTGGCGATGGTGATCTCCC+TGG | 0.590906 | 1.1:+59099795 | None:intergenic |
| ATCCCATGAGATGTGACAAT+GGG | 0.592439 | 1.1:+59092059 | None:intergenic |
| AGATTACTTGGTCACTGATG+AGG | 0.592637 | 1.1:-59090502 | MS.gene74888:intron |
| TCAAGAGGCAGAGTAACCAT+AGG | 0.593677 | 1.1:+59089410 | None:intergenic |
| GTCAACGCTTGTGGGTGGTT+AGG | 0.593743 | 1.1:+59095184 | None:intergenic |
| TCAGTGACCTTAAAATGCTG+TGG | 0.594451 | 1.1:+59088894 | None:intergenic |
| CAAGTGGATATGCTATGGCA+TGG | 0.594989 | 1.1:+59092446 | None:intergenic |
| CAACCTTAATGGTTATACAA+AGG | 0.596920 | 1.1:-59091770 | MS.gene74888:intron |
| ATCAACATGCTCTTCAGACA+CGG | 0.597820 | 1.1:-59096604 | MS.gene74888:CDS |
| AGCAGGAGAAATGAGACTGA+GGG | 0.597842 | 1.1:-59089905 | MS.gene74888:CDS |
| GGTGGTTAGGCTGTAACGAA+AGG | 0.598171 | 1.1:+59095197 | None:intergenic |
| GTTTGTGTCAAAGAGAGGAC+AGG | 0.598476 | 1.1:+59089071 | None:intergenic |
| TGAAGGGTGAACACATTAGA+CGG | 0.599057 | 1.1:-59089616 | MS.gene74888:CDS |
| GCTGAGAGTGGTGGTTGTAG+TGG | 0.599298 | 1.1:+59099774 | None:intergenic |
| TAATATGGCAAATGCATGGA+AGG | 0.599920 | 1.1:-59099029 | MS.gene74888:intron |
| ACATACGTGCGATTACCGTC+AGG | 0.600155 | 1.1:-59094641 | MS.gene74888:CDS |
| TCTGTATTTCCACTGGACTG+GGG | 0.600589 | 1.1:-59089358 | MS.gene74888:CDS |
| TCAACGCGATCTCCGGTGAA+CGG | 0.601206 | 1.1:+59099722 | None:intergenic |
| GAACGGCAACCGAGAGCTGT+CGG | 0.601559 | 1.1:+59099739 | None:intergenic |
| TTACCTTGTATACATTCCCA+AGG | 0.606164 | 1.1:+59096752 | None:intergenic |
| CCATAATATATCTGTTCCTG+TGG | 0.606701 | 1.1:+59089442 | None:intergenic |
| CACCCATTGTCACATCTCAT+GGG | 0.607132 | 1.1:-59092061 | MS.gene74888:CDS |
| GCTGCTTATATATTATAGCA+AGG | 0.607657 | 1.1:+59094971 | None:intergenic |
| TCCTATTCCAATCAAGCAGG+AGG | 0.607994 | 1.1:-59092230 | MS.gene74888:CDS |
| TCTAATGAAAGCTCAAGGGT+TGG | 0.609689 | 1.1:-59098021 | MS.gene74888:CDS |
| GCGATGGTGATCTCCCTGGA+CGG | 0.610099 | 1.1:+59099799 | None:intergenic |
| ACGGTAATATGGCAAATGCA+TGG | 0.610222 | 1.1:-59099033 | MS.gene74888:CDS |
| TAGACATGTGCATACTGAAG+AGG | 0.614582 | 1.1:+59090384 | None:intergenic |
| GATTGGTCAACGCTTGTGGG+TGG | 0.615687 | 1.1:+59095179 | None:intergenic |
| GTCCAAATGATGGTACTGAA+TGG | 0.616666 | 1.1:-59091897 | MS.gene74888:CDS |
| TTTCAGATGCTGCTGCACAA+GGG | 0.618278 | 1.1:-59089676 | MS.gene74888:intron |
| CCGTAACACTCGGCAAAGTG+TGG | 0.618577 | 1.1:+59099052 | None:intergenic |
| ATTTGACCATGCAATAGCAA+AGG | 0.621397 | 1.1:+59097217 | None:intergenic |
| TTATGCAATGCACATACCAC+AGG | 0.622011 | 1.1:-59089458 | MS.gene74888:CDS |
| GGAATCATGATCTCCGTCCA+GGG | 0.622815 | 1.1:-59099812 | None:intergenic |
| GTCAAGAAATAAGTCTGCCA+AGG | 0.623121 | 1.1:+59089589 | None:intergenic |
| GTAATCTAATGAAAGCTCAA+GGG | 0.626437 | 1.1:-59098025 | MS.gene74888:CDS |
| CATCGGTTTGTGTCAAAGAG+AGG | 0.626631 | 1.1:+59089066 | None:intergenic |
| TAACATGCAATAGCTTCTTG+AGG | 0.628478 | 1.1:+59096626 | None:intergenic |
| AAATGTTCAAGGAAGTAGAA+GGG | 0.629997 | 1.1:-59092631 | MS.gene74888:CDS |
| GAAAGATGTTGGCAGAGTGG+AGG | 0.630480 | 1.1:-59095342 | MS.gene74888:CDS |
| GACCATGCAATAGCAAAGGT+AGG | 0.630488 | 1.1:+59097221 | None:intergenic |
| TCTCTTTGACACAAACCGAT+GGG | 0.631347 | 1.1:-59089064 | MS.gene74888:intron |
| TTCAGCCATAGTAGGCCTGA+CGG | 0.631547 | 1.1:+59094626 | None:intergenic |
| GCAGACCTTGTAATACTGCA+GGG | 0.633448 | 1.1:+59097154 | None:intergenic |
| TGCCATATCTTGCTACAATG+AGG | 0.633633 | 1.1:-59094757 | MS.gene74888:CDS |
| GCACATCAAATGTACAAGAG+TGG | 0.634726 | 1.1:-59099343 | MS.gene74888:CDS |
| GAGAGTGGTGGTTGTAGTGG+TGG | 0.636309 | 1.1:+59099777 | None:intergenic |
| GACACGGCCAAACTATGGCA+TGG | 0.637088 | 1.1:-59096588 | MS.gene74888:CDS |
| TATGCACAACAGAAAGAATG+TGG | 0.638579 | 1.1:-59092026 | MS.gene74888:CDS |
| ATGAGCCAACAAGCTGAGAG+TGG | 0.640591 | 1.1:+59099762 | None:intergenic |
| AGTAAATTATCGGTGCGAAG+CGG | 0.641514 | 1.1:+59099271 | None:intergenic |
| AGGTATGTGAGTAGTGACTT+TGG | 0.648824 | 1.1:-59092088 | MS.gene74888:CDS |
| CAGCAGGAGAAATGAGACTG+AGG | 0.649017 | 1.1:-59089906 | MS.gene74888:CDS |
| ACAAGACCATCAGCTGCCAA+GGG | 0.656374 | 1.1:+59094720 | None:intergenic |
| GGATATGCTATGGCATGGAA+AGG | 0.659767 | 1.1:+59092451 | None:intergenic |
| GTTCAAGTATGCATCAGGGA+AGG | 0.661650 | 1.1:+59096774 | None:intergenic |
| CTGCCAAGGGATCAATGCGG+AGG | 0.661848 | 1.1:+59094733 | None:intergenic |
| CCTATTCCAATCAAGCAGGA+GGG | 0.662777 | 1.1:-59092229 | MS.gene74888:CDS |
| TCAAGTAATAGCGAATTGCA+AGG | 0.664537 | 1.1:+59098876 | None:intergenic |
| CCATGAGATGTGACAATGGG+TGG | 0.665060 | 1.1:+59092062 | None:intergenic |
| ATTCCAATCAAGCAGGAGGG+AGG | 0.666622 | 1.1:-59092226 | MS.gene74888:CDS |
| TATGCCTTGAGTCCAAATGA+TGG | 0.671518 | 1.1:-59091907 | MS.gene74888:CDS |
| CAAGGTTCAAGTATGCATCA+GGG | 0.675585 | 1.1:+59096770 | None:intergenic |
| GCAGTGTGTCTGTTGTTGGG+AGG | 0.677864 | 1.1:-59092663 | MS.gene74888:intron |
| AAATTGTTAATGCAGGAACA+TGG | 0.679005 | 1.1:-59095064 | MS.gene74888:intron |
| CCTGGTAATAAATTGCACCA+AGG | 0.681422 | 1.1:+59099245 | None:intergenic |
| GGCATACAGTTGTTACCTCG+AGG | 0.683086 | 1.1:-59097258 | MS.gene74888:CDS |
| TTTCAGTGGACATGTAGAGG+CGG | 0.686039 | 1.1:-59094252 | MS.gene74888:intron |
| AGCCAACAAGCTGAGAGTGG+TGG | 0.690346 | 1.1:+59099765 | None:intergenic |
| GATCCCATGAGATGTGACAA+TGG | 0.693395 | 1.1:+59092058 | None:intergenic |
| GTTGTATACGCAATGCCTCG+AGG | 0.703270 | 1.1:+59097243 | None:intergenic |
| GCTGATGGTCTTGTAAACAG+AGG | 0.706829 | 1.1:-59094711 | MS.gene74888:CDS |
| ATACGGTGCAGATAATCCAG+TGG | 0.709165 | 1.1:+59094999 | None:intergenic |
| TGATTGGAATAGGAGCAGGA+TGG | 0.709742 | 1.1:+59092239 | None:intergenic |
| GGAGCAGGATGGCTAAATGG+CGG | 0.711620 | 1.1:+59092250 | None:intergenic |
| GCACAACAGAAAGAATGTGG+AGG | 0.713802 | 1.1:-59092023 | MS.gene74888:intron |
| TCGTTTACAAAGTAGCAATG+CGG | 0.715211 | 1.1:+59090339 | None:intergenic |
| TCTGAAAGATGTTGGCAGAG+TGG | 0.720915 | 1.1:-59095345 | MS.gene74888:CDS |
| TTGTTAATGCAGGAACATGG+TGG | 0.744612 | 1.1:-59095061 | MS.gene74888:intron |
| ATCAGATTATGGTCTCCCTG+AGG | 0.756050 | 1.1:-59090160 | MS.gene74888:CDS |
| CAGCTGCCAAGGGATCAATG+CGG | 0.837731 | 1.1:+59094730 | None:intergenic |
| GATAGCAAAATTGATCAACG+AGG | 0.841690 | 1.1:-59091812 | MS.gene74888:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 59088863 | 59099828 | 59088863 | ID=MS.gene74888 |
| chr1.1 | mRNA | 59088863 | 59099828 | 59088863 | ID=MS.gene74888.t1;Parent=MS.gene74888 |
| chr1.1 | exon | 59099651 | 59099828 | 59099651 | ID=MS.gene74888.t1.exon1;Parent=MS.gene74888.t1 |
| chr1.1 | CDS | 59099651 | 59099828 | 59099651 | ID=cds.MS.gene74888.t1;Parent=MS.gene74888.t1 |
| chr1.1 | exon | 59099246 | 59099391 | 59099246 | ID=MS.gene74888.t1.exon2;Parent=MS.gene74888.t1 |
| chr1.1 | CDS | 59099246 | 59099391 | 59099246 | ID=cds.MS.gene74888.t1;Parent=MS.gene74888.t1 |
| chr1.1 | exon | 59099030 | 59099128 | 59099030 | ID=MS.gene74888.t1.exon3;Parent=MS.gene74888.t1 |
| chr1.1 | CDS | 59099030 | 59099128 | 59099030 | ID=cds.MS.gene74888.t1;Parent=MS.gene74888.t1 |
| chr1.1 | exon | 59098865 | 59098915 | 59098865 | ID=MS.gene74888.t1.exon4;Parent=MS.gene74888.t1 |
| chr1.1 | CDS | 59098865 | 59098915 | 59098865 | ID=cds.MS.gene74888.t1;Parent=MS.gene74888.t1 |
| chr1.1 | exon | 59098236 | 59098352 | 59098236 | ID=MS.gene74888.t1.exon5;Parent=MS.gene74888.t1 |
| chr1.1 | CDS | 59098236 | 59098352 | 59098236 | ID=cds.MS.gene74888.t1;Parent=MS.gene74888.t1 |
| chr1.1 | exon | 59098013 | 59098069 | 59098013 | ID=MS.gene74888.t1.exon6;Parent=MS.gene74888.t1 |
| chr1.1 | CDS | 59098013 | 59098069 | 59098013 | ID=cds.MS.gene74888.t1;Parent=MS.gene74888.t1 |
| chr1.1 | exon | 59097160 | 59097279 | 59097160 | ID=MS.gene74888.t1.exon7;Parent=MS.gene74888.t1 |
| chr1.1 | CDS | 59097160 | 59097279 | 59097160 | ID=cds.MS.gene74888.t1;Parent=MS.gene74888.t1 |
| chr1.1 | exon | 59096756 | 59096818 | 59096756 | ID=MS.gene74888.t1.exon8;Parent=MS.gene74888.t1 |
| chr1.1 | CDS | 59096756 | 59096818 | 59096756 | ID=cds.MS.gene74888.t1;Parent=MS.gene74888.t1 |
| chr1.1 | exon | 59096582 | 59096660 | 59096582 | ID=MS.gene74888.t1.exon9;Parent=MS.gene74888.t1 |
| chr1.1 | CDS | 59096582 | 59096660 | 59096582 | ID=cds.MS.gene74888.t1;Parent=MS.gene74888.t1 |
| chr1.1 | exon | 59095686 | 59095795 | 59095686 | ID=MS.gene74888.t1.exon10;Parent=MS.gene74888.t1 |
| chr1.1 | CDS | 59095686 | 59095795 | 59095686 | ID=cds.MS.gene74888.t1;Parent=MS.gene74888.t1 |
| chr1.1 | exon | 59095322 | 59095375 | 59095322 | ID=MS.gene74888.t1.exon11;Parent=MS.gene74888.t1 |
| chr1.1 | CDS | 59095322 | 59095375 | 59095322 | ID=cds.MS.gene74888.t1;Parent=MS.gene74888.t1 |
| chr1.1 | exon | 59095157 | 59095224 | 59095157 | ID=MS.gene74888.t1.exon12;Parent=MS.gene74888.t1 |
| chr1.1 | CDS | 59095157 | 59095224 | 59095157 | ID=cds.MS.gene74888.t1;Parent=MS.gene74888.t1 |
| chr1.1 | exon | 59094969 | 59095071 | 59094969 | ID=MS.gene74888.t1.exon13;Parent=MS.gene74888.t1 |
| chr1.1 | CDS | 59094969 | 59095071 | 59094969 | ID=cds.MS.gene74888.t1;Parent=MS.gene74888.t1 |
| chr1.1 | exon | 59094591 | 59094793 | 59094591 | ID=MS.gene74888.t1.exon14;Parent=MS.gene74888.t1 |
| chr1.1 | CDS | 59094591 | 59094793 | 59094591 | ID=cds.MS.gene74888.t1;Parent=MS.gene74888.t1 |
| chr1.1 | exon | 59094172 | 59094268 | 59094172 | ID=MS.gene74888.t1.exon15;Parent=MS.gene74888.t1 |
| chr1.1 | CDS | 59094172 | 59094268 | 59094172 | ID=cds.MS.gene74888.t1;Parent=MS.gene74888.t1 |
| chr1.1 | exon | 59092610 | 59092681 | 59092610 | ID=MS.gene74888.t1.exon16;Parent=MS.gene74888.t1 |
| chr1.1 | CDS | 59092610 | 59092681 | 59092610 | ID=cds.MS.gene74888.t1;Parent=MS.gene74888.t1 |
| chr1.1 | exon | 59092421 | 59092497 | 59092421 | ID=MS.gene74888.t1.exon17;Parent=MS.gene74888.t1 |
| chr1.1 | CDS | 59092421 | 59092497 | 59092421 | ID=cds.MS.gene74888.t1;Parent=MS.gene74888.t1 |
| chr1.1 | exon | 59092205 | 59092321 | 59092205 | ID=MS.gene74888.t1.exon18;Parent=MS.gene74888.t1 |
| chr1.1 | CDS | 59092205 | 59092321 | 59092205 | ID=cds.MS.gene74888.t1;Parent=MS.gene74888.t1 |
| chr1.1 | exon | 59092024 | 59092108 | 59092024 | ID=MS.gene74888.t1.exon19;Parent=MS.gene74888.t1 |
| chr1.1 | CDS | 59092024 | 59092108 | 59092024 | ID=cds.MS.gene74888.t1;Parent=MS.gene74888.t1 |
| chr1.1 | exon | 59091771 | 59091938 | 59091771 | ID=MS.gene74888.t1.exon20;Parent=MS.gene74888.t1 |
| chr1.1 | CDS | 59091771 | 59091938 | 59091771 | ID=cds.MS.gene74888.t1;Parent=MS.gene74888.t1 |
| chr1.1 | exon | 59090503 | 59090613 | 59090503 | ID=MS.gene74888.t1.exon21;Parent=MS.gene74888.t1 |
| chr1.1 | CDS | 59090503 | 59090613 | 59090503 | ID=cds.MS.gene74888.t1;Parent=MS.gene74888.t1 |
| chr1.1 | exon | 59090329 | 59090415 | 59090329 | ID=MS.gene74888.t1.exon22;Parent=MS.gene74888.t1 |
| chr1.1 | CDS | 59090329 | 59090415 | 59090329 | ID=cds.MS.gene74888.t1;Parent=MS.gene74888.t1 |
| chr1.1 | exon | 59090096 | 59090223 | 59090096 | ID=MS.gene74888.t1.exon23;Parent=MS.gene74888.t1 |
| chr1.1 | CDS | 59090096 | 59090223 | 59090096 | ID=cds.MS.gene74888.t1;Parent=MS.gene74888.t1 |
| chr1.1 | exon | 59089902 | 59089984 | 59089902 | ID=MS.gene74888.t1.exon24;Parent=MS.gene74888.t1 |
| chr1.1 | CDS | 59089902 | 59089984 | 59089902 | ID=cds.MS.gene74888.t1;Parent=MS.gene74888.t1 |
| chr1.1 | exon | 59089587 | 59089692 | 59089587 | ID=MS.gene74888.t1.exon25;Parent=MS.gene74888.t1 |
| chr1.1 | CDS | 59089587 | 59089692 | 59089587 | ID=cds.MS.gene74888.t1;Parent=MS.gene74888.t1 |
| chr1.1 | exon | 59089338 | 59089484 | 59089338 | ID=MS.gene74888.t1.exon26;Parent=MS.gene74888.t1 |
| chr1.1 | CDS | 59089338 | 59089484 | 59089338 | ID=cds.MS.gene74888.t1;Parent=MS.gene74888.t1 |
| chr1.1 | exon | 59089065 | 59089185 | 59089065 | ID=MS.gene74888.t1.exon27;Parent=MS.gene74888.t1 |
| chr1.1 | CDS | 59089065 | 59089185 | 59089065 | ID=cds.MS.gene74888.t1;Parent=MS.gene74888.t1 |
| chr1.1 | exon | 59088863 | 59088976 | 59088863 | ID=MS.gene74888.t1.exon28;Parent=MS.gene74888.t1 |
| chr1.1 | CDS | 59088863 | 59088976 | 59088863 | ID=cds.MS.gene74888.t1;Parent=MS.gene74888.t1 |
| Gene Sequence |
| Protein sequence |
