AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene75623

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene75623.t1 MTR_3g085130 98.589 992 14 0 1 992 43 1034 0.0 2037
MS.gene75623.t1 MTR_3g085130 98.665 824 11 0 169 992 1 824 0.0 1684
MS.gene75623.t1 MTR_8g080770 80.408 980 181 5 14 992 1 970 0.0 1597
MS.gene75623.t1 MTR_8g080770 80.253 871 159 6 124 992 2 861 0.0 1398
MS.gene75623.t1 MTR_5g097410 55.169 977 381 13 47 989 259 1212 0.0 1045
MS.gene75623.t1 MTR_8g106150 51.759 995 416 15 38 991 25 996 0.0 962
MS.gene75623.t1 MTR_8g106150 50.665 752 328 13 276 991 9 753 0.0 696
MS.gene75623.t1 MTR_2g067240 49.524 315 97 4 214 526 1 255 1.86e-87 281
MS.gene75623.t1 MTR_1g013360 35.962 317 167 7 408 689 379 694 1.10e-41 166
MS.gene75623.t1 MTR_1g013360 32.867 143 76 3 866 989 870 1011 5.04e-13 73.9
MS.gene75623.t1 MTR_3g105590 36.644 292 172 7 408 690 373 660 5.00e-38 154
MS.gene75623.t1 MTR_3g105590 30.667 150 83 3 861 990 801 949 6.07e-14 77.0
MS.gene75623.t1 MTR_5g022470 31.165 369 223 9 309 664 404 754 1.43e-37 153
MS.gene75623.t1 MTR_5g022470 31.165 369 223 9 309 664 404 754 1.68e-37 153
MS.gene75623.t1 MTR_5g022470 34.932 146 64 2 858 977 1044 1184 9.47e-17 86.3
MS.gene75623.t1 MTR_8g075340 33.861 316 191 6 361 674 427 726 6.40e-37 151
MS.gene75623.t1 MTR_8g075340 34.161 161 81 4 837 977 999 1154 6.96e-17 86.7
MS.gene75623.t1 MTR_4g031150 29.526 359 212 6 396 751 384 704 3.52e-35 144
MS.gene75623.t1 MTR_4g031150 33.884 121 72 3 861 981 661 773 9.43e-12 69.7
MS.gene75623.t1 MTR_5g044100 63.218 87 31 1 850 935 137 223 6.03e-28 113
MS.gene75623.t1 MTR_7g109150 28.716 296 173 5 396 690 335 593 1.10e-27 120
MS.gene75623.t1 MTR_1g087140 29.393 313 182 11 397 688 381 675 1.79e-27 120
MS.gene75623.t1 MTR_1g087140 33.577 137 68 6 861 986 970 1094 2.19e-14 78.6
MS.gene75623.t1 MTR_1g090850 27.181 298 188 8 398 682 371 652 2.59e-21 100
MS.gene75623.t1 MTR_1g090850 37.313 134 64 4 861 985 923 1045 1.48e-16 85.5
MS.gene75623.t1 MTR_7g116330 36.220 127 67 4 863 985 638 754 2.06e-15 81.6
MS.gene75623.t1 MTR_7g116330 22.715 383 238 8 396 770 366 698 2.90e-15 80.9
MS.gene75623.t1 MTR_1g073840 31.298 131 82 3 860 989 631 754 3.86e-14 77.4
MS.gene75623.t1 MTR_1g073840 25.503 149 111 0 384 532 344 492 1.37e-11 68.9
MS.gene75623.t1 MTR_8g019680 46.914 81 32 3 905 985 77 146 1.46e-13 69.7
MS.gene75623.t1 MTR_1g079790 35.200 125 72 3 863 985 634 751 8.14e-13 73.2
MS.gene75623.t1 MTR_1g079790 21.337 389 261 9 384 770 350 695 3.93e-12 70.9
MS.gene75623.t1 MTR_1g079790 23.214 168 129 0 384 551 350 517 6.08e-12 70.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene75623.t1 AT1G27320 67.608 991 287 9 14 991 61 1030 0.0 1327
MS.gene75623.t1 AT5G35750 55.831 969 379 12 47 990 230 1174 0.0 1055
MS.gene75623.t1 AT2G01830 52.815 977 403 14 44 990 101 1049 0.0 981
MS.gene75623.t1 AT2G01830 52.815 977 403 14 44 990 101 1049 0.0 981
MS.gene75623.t1 AT2G01830 52.815 977 403 14 44 990 101 1049 0.0 981
MS.gene75623.t1 AT2G01830 52.815 977 403 14 44 990 101 1049 0.0 981
MS.gene75623.t1 AT2G01830 52.815 977 403 14 44 990 113 1061 0.0 981
MS.gene75623.t1 AT2G01830 52.815 977 403 14 44 990 124 1072 0.0 980
MS.gene75623.t1 AT2G17820 32.416 327 199 7 361 683 454 762 3.23e-39 159
MS.gene75623.t1 AT2G17820 32.215 149 64 2 861 977 1041 1184 1.59e-14 79.0
MS.gene75623.t1 AT5G10720 35.793 271 143 4 408 678 369 608 4.00e-39 157
MS.gene75623.t1 AT5G10720 31.944 144 78 3 865 989 779 921 6.93e-15 80.1
MS.gene75623.t1 AT1G66340 30.556 360 203 7 396 751 334 650 4.37e-36 147
MS.gene75623.t1 AT2G40940 30.657 274 154 2 396 669 334 571 1.08e-28 123
MS.gene75623.t1 AT2G47430 28.349 321 194 9 393 696 383 684 3.58e-28 123
MS.gene75623.t1 AT2G47430 36.076 158 78 7 845 985 966 1117 2.77e-15 81.6
MS.gene75623.t1 AT3G04580 32.298 161 94 4 834 992 617 764 2.12e-15 81.6
MS.gene75623.t1 AT3G04580 22.609 460 284 15 396 839 358 761 1.13e-13 75.9
MS.gene75623.t1 AT3G04580 32.298 161 94 4 834 992 617 764 2.12e-15 81.6
MS.gene75623.t1 AT3G04580 22.609 460 284 15 396 839 358 761 1.13e-13 75.9
MS.gene75623.t1 AT3G23150 29.412 153 93 2 842 989 624 766 4.22e-12 70.9

Find 235 sgRNAs with CRISPR-Local

Find 345 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATATCTATTGATGTGCTTTC+TGG 0.199915 3.3:-71145003 MS.gene75623:CDS
ATTGTTGCTGGCATGGGTTT+TGG 0.201381 3.3:-71145898 MS.gene75623:CDS
GTTTGTTCATCTACCCATTT+TGG 0.201868 3.3:-71141183 MS.gene75623:CDS
TTAACTTTGGAGATCCTTTC+AGG 0.201914 3.3:-71144147 MS.gene75623:CDS
TTGCTGATGGTCGCCGCAGC+TGG 0.223040 3.3:-71142665 MS.gene75623:CDS
GTTCGATATACGAGCAATTA+TGG 0.223643 3.3:-71143175 MS.gene75623:CDS
GTCAATTATAAATGAAGTTT+TGG 0.241047 3.3:-71143244 MS.gene75623:CDS
GTTGCTTGAATCCTTTCATT+TGG 0.253731 3.3:+71144758 None:intergenic
TTGCTTGAATCCTTTCATTT+GGG 0.258270 3.3:+71144759 None:intergenic
GTTTGAAGCTCATTTGAATT+AGG 0.258603 3.3:+71142333 None:intergenic
GTCTGCGGTCATAGCCAAAA+TGG 0.274932 3.3:+71141169 None:intergenic
GTTGGTTTATAGTGTCTCTA+TGG 0.276176 3.3:-71145875 MS.gene75623:CDS
TCTCTCAAGCATCTTCTCTC+TGG 0.280566 3.3:-71141826 MS.gene75623:CDS
TTAACGAGAATAAATAGTTT+TGG 0.294927 3.3:+71142009 None:intergenic
TCAATTTGATGCATGTTTCA+TGG 0.295254 3.3:-71141671 MS.gene75623:CDS
CCTGCAACCTCAGAGTTTAA+TGG 0.298082 3.3:-71142285 MS.gene75623:CDS
CTTGTTATTGCACTCCTTGT+TGG 0.299522 3.3:-71143700 MS.gene75623:CDS
AATGCATACCCATCCATTTC+AGG 0.300024 3.3:+71141637 None:intergenic
TCTCATGGGTAACTCGATTA+AGG 0.309745 3.3:-71142911 MS.gene75623:intron
CCCAAACCTCTTGTTCAATC+AGG 0.316912 3.3:+71142112 None:intergenic
TACACTGATAATACTGTTGA+TGG 0.335179 3.3:+71145958 None:intergenic
TCAGAACCATACATGGGAAT+TGG 0.339185 3.3:+71144205 None:intergenic
CGCACTTTGTGAATAACATT+AGG 0.352181 3.3:-71142068 MS.gene75623:CDS
CTGCGGCGACCATCAGCAAC+TGG 0.353028 3.3:+71142669 None:intergenic
CCATTAAACTCTGAGGTTGC+AGG 0.355278 3.3:+71142285 None:intergenic
TCCCACACTTAGAGCATTCC+TGG 0.359931 3.3:+71141129 None:intergenic
CATGTGAGCTTTCTTAACTT+TGG 0.362535 3.3:-71144160 MS.gene75623:CDS
CTCTCTCAACTTCTATTGAA+TGG 0.365237 3.3:+71142733 None:intergenic
AAAGTTGTTGAAGTTGATAA+AGG 0.366112 3.3:-71142045 MS.gene75623:CDS
TCCTCGAAACGGAGAACATC+AGG 0.366537 3.3:-71141854 MS.gene75623:CDS
CCCTGATGTTCTCCGTTTCG+AGG 0.366643 3.3:+71141853 None:intergenic
CGGTTCTGACATATTCTTGT+TGG 0.374228 3.3:+71143292 None:intergenic
TTTGTGAGCGAACCGAAGAT+TGG 0.374889 3.3:-71142396 MS.gene75623:CDS
TCCTGATTGAACAAGAGGTT+TGG 0.378231 3.3:-71142113 MS.gene75623:CDS
GGATATTCAAATGCCTGAAA+TGG 0.382771 3.3:-71141650 MS.gene75623:CDS
TGATTATGTACCAGATGAAT+TGG 0.385215 3.3:-71145091 MS.gene75623:CDS
ATTATTTGTCGAAACCTTCC+AGG 0.393734 3.3:+71142940 None:intergenic
CAGGTTCCTCAACAGCTTAT+AGG 0.395280 3.3:-71142967 MS.gene75623:CDS
GATGCAGAACATACATTAAG+TGG 0.399490 3.3:-71142696 MS.gene75623:CDS
GACCAGGCAAAGATTGAATC+TGG 0.399819 3.3:-71143222 MS.gene75623:CDS
TGACAGGAGCATATTCTTCA+TGG 0.406008 3.3:+71145055 None:intergenic
TCATTTGGGGTAGCATTTGA+TGG 0.407780 3.3:+71144773 None:intergenic
CAACAGTATTATCAGTGTAT+TGG 0.408995 3.3:-71145954 MS.gene75623:CDS
TGAAACATGCATCAAATTGA+TGG 0.409814 3.3:+71141674 None:intergenic
ACATAATCATCCTCATGAAC+CGG 0.414182 3.3:+71145105 None:intergenic
TAACCTAAAACACCGTTCAT+TGG 0.415965 3.3:+71143443 None:intergenic
CCTGATTGAACAAGAGGTTT+GGG 0.417274 3.3:-71142112 MS.gene75623:CDS
GTGTTGCGAGCAAGAGAATC+AGG 0.418715 3.3:-71144884 MS.gene75623:CDS
GTGAAAGTGCTTCCAATCTT+CGG 0.418916 3.3:+71142384 None:intergenic
CTCGACACTTCAGCACGAAC+GGG 0.429876 3.3:+71142234 None:intergenic
GTATTGGTTCTAAAAGAGTT+AGG 0.431830 3.3:-71145938 MS.gene75623:CDS
TGCTGATGGTCGCCGCAGCT+GGG 0.438301 3.3:-71142664 MS.gene75623:CDS
TCTGAGAAATCTCAAGGAAA+AGG 0.441122 3.3:-71143132 MS.gene75623:CDS
AATCAAACTGATGAGATCAT+TGG 0.444384 3.3:+71142584 None:intergenic
CTCTCAAGCATCTTCTCTCT+GGG 0.446499 3.3:-71141825 MS.gene75623:CDS
AGATGCATCCCCATCGGTTA+CGG 0.446690 3.3:+71142146 None:intergenic
AGCAGTTTATGTCTCGGATC+AGG 0.446805 3.3:-71142986 MS.gene75623:CDS
GGCCTCATGAATGGAGAAAT+CGG 0.447591 3.3:-71142420 MS.gene75623:CDS
CCCGTCGCCAACCTTGGAAA+TGG 0.448066 3.3:+71143739 None:intergenic
AACTCTGAGGTTGCAGGATG+AGG 0.449215 3.3:+71142291 None:intergenic
ATTGTATCGGTAGAGGATAC+AGG 0.449292 3.3:-71142564 MS.gene75623:CDS
TACAAAGAGCAATGGGTGTT+GGG 0.450440 3.3:-71141888 MS.gene75623:CDS
TAAATGTTGGGAGAAGATCT+TGG 0.452217 3.3:-71145997 MS.gene75623:CDS
TCGAGAAAACACGGAGGAAC+TGG 0.453005 3.3:-71142474 MS.gene75623:CDS
CAGAACCATACATGGGAATT+GGG 0.453538 3.3:+71144206 None:intergenic
TTGGCGACGGGTACATCAAT+TGG 0.453701 3.3:-71143727 MS.gene75623:CDS
TAAAGTTGTTCAGCTTCAAA+TGG 0.453871 3.3:+71141086 None:intergenic
AAATGTTGGGAGAAGATCTT+GGG 0.457357 3.3:-71145996 MS.gene75623:CDS
AGCTAGCATGTGTGATGAAA+GGG 0.457628 3.3:-71145802 MS.gene75623:CDS
TTCAGTCACGAGGGACCTCT+TGG 0.458368 3.3:-71142627 MS.gene75623:CDS
TTGGTAATCATCCTCTACTT+TGG 0.458958 3.3:+71143645 None:intergenic
TGGGGATGCATCTATCAATA+TGG 0.459409 3.3:-71142136 MS.gene75623:CDS
TACCAGATTCAATCTTTGCC+TGG 0.460164 3.3:+71143220 None:intergenic
ACAAATAATTACAAATCTCA+TGG 0.460319 3.3:-71142926 MS.gene75623:CDS
ATGTATGGTTCTGATGTATC+AGG 0.460892 3.3:-71144196 MS.gene75623:CDS
GGTTCTGACATATTCTTGTT+GGG 0.465067 3.3:+71143293 None:intergenic
TGCTATGCAGGTATCTTGGT+GGG 0.467017 3.3:-71144327 MS.gene75623:intron
TAACTGCTATGCAGGTATCT+TGG 0.469122 3.3:-71144331 MS.gene75623:intron
TGTTTAGTGGGCCTCATGAA+TGG 0.472002 3.3:-71142429 MS.gene75623:CDS
CTGTTGAAAACAAACCGTTT+AGG 0.473410 3.3:-71144833 MS.gene75623:CDS
GGGGATGGTTCCAATTCATC+TGG 0.475795 3.3:+71145081 None:intergenic
GGAGGAAATTGTTGCTGGCA+TGG 0.482367 3.3:-71145905 MS.gene75623:CDS
CATTAGTATGGACACAAAGA+TGG 0.482671 3.3:-71146051 None:intergenic
ATTGTGGAGGAAATTGTTGC+TGG 0.485555 3.3:-71145910 MS.gene75623:CDS
GTCAGAACCGCACAAGGCAG+TGG 0.486290 3.3:-71143279 MS.gene75623:CDS
GACTATCCATCTTGTTGAGG+AGG 0.486988 3.3:-71142760 MS.gene75623:CDS
CAACAGCTTATAGGTGATCC+TGG 0.488540 3.3:-71142958 MS.gene75623:CDS
AAGCATTAGCAAGTGTTTAG+TGG 0.490010 3.3:-71142442 MS.gene75623:CDS
GATGGACCTACCTGCATGAA+TGG 0.490106 3.3:+71142501 None:intergenic
GAGCATATTCTTCATGGATA+GGG 0.491204 3.3:+71145061 None:intergenic
AACAAGGGTGGAGTATTAAG+AGG 0.492013 3.3:-71145149 MS.gene75623:CDS
TATTGATGTGCTTTCTGGAA+AGG 0.494599 3.3:-71144998 MS.gene75623:intron
GTTTGAAATAGAGTCATTAG+TGG 0.495045 3.3:-71144302 MS.gene75623:CDS
TGTGACTATCCATCTTGTTG+AGG 0.496121 3.3:-71142763 MS.gene75623:CDS
ATGTGAGGATAACTCCTAAA+CGG 0.497426 3.3:+71144819 None:intergenic
GATGGTCGCCGCAGCTGGGA+AGG 0.497475 3.3:-71142660 MS.gene75623:CDS
TGCTCTAAGTGTGGGATGGA+TGG 0.499675 3.3:-71141122 MS.gene75623:CDS
GATGTACCCGTCGCCAACCT+TGG 0.499801 3.3:+71143733 None:intergenic
CAGTTTGATTGTATCGGTAG+AGG 0.505448 3.3:-71142571 MS.gene75623:CDS
GAAAGATGTGGCTTAAATGT+TGG 0.505804 3.3:-71146010 MS.gene75623:CDS
CAATGGGTGTTGGGAACAAA+GGG 0.506109 3.3:-71141879 MS.gene75623:CDS
GAAACCACCATTTCCAAGGT+TGG 0.506338 3.3:-71143746 MS.gene75623:CDS
CTGCTATGCAGGTATCTTGG+TGG 0.507522 3.3:-71144328 MS.gene75623:intron
ACACACCCAATTCCCATGTA+TGG 0.507762 3.3:-71144211 MS.gene75623:CDS
GAGGAAATTGTTGCTGGCAT+GGG 0.509124 3.3:-71145904 MS.gene75623:CDS
AAACACGGAGGAACTGGTAT+TGG 0.510837 3.3:-71142468 MS.gene75623:CDS
ATTTGAATTAGGACATGCAT+TGG 0.511417 3.3:+71142344 None:intergenic
GGAGCATATTCTTCATGGAT+AGG 0.512983 3.3:+71145060 None:intergenic
GTGGTGTTGCATATGCTGTA+AGG 0.513848 3.3:-71145206 MS.gene75623:CDS
AGCTGATGTTGCTAAATCCC+AGG 0.514509 3.3:-71143590 MS.gene75623:intron
CTACAAAGAGCAATGGGTGT+TGG 0.514952 3.3:-71141889 MS.gene75623:CDS
ACCATTTCCAAGGTTGGCGA+CGG 0.515570 3.3:-71143740 MS.gene75623:CDS
ATAGTTTCAGATTTGAAGCA+AGG 0.519061 3.3:-71142177 MS.gene75623:CDS
TGATACATCAGAACCATACA+TGG 0.519775 3.3:+71144198 None:intergenic
ATTCAAATGCCTGAAATGGA+TGG 0.520727 3.3:-71141646 MS.gene75623:CDS
CGTGATGCAGGCTACACACC+AGG 0.521945 3.3:-71141147 MS.gene75623:CDS
ACAAGGCAGTGGAAAAGCTC+TGG 0.522119 3.3:-71143268 MS.gene75623:CDS
AACCTCAGAGTTTAATGGTA+TGG 0.522313 3.3:-71142280 MS.gene75623:CDS
AACAGAAACCACCATTTCCA+AGG 0.522429 3.3:-71143750 MS.gene75623:CDS
ACTTCAGCACGAACGGGTCT+CGG 0.525496 3.3:+71142240 None:intergenic
GAGCAAGAGAATCAGGCAAA+GGG 0.525841 3.3:-71144877 MS.gene75623:CDS
GTGAATCGCACGGTAGCAGC+TGG 0.527329 3.3:-71141772 MS.gene75623:CDS
TCTGCGGTCATAGCCAAAAT+GGG 0.530084 3.3:+71141170 None:intergenic
TAGCTAGCATGTGTGATGAA+AGG 0.530785 3.3:-71145803 MS.gene75623:CDS
GGAAGCATGAGATGCACTGC+AGG 0.532148 3.3:-71144126 MS.gene75623:intron
AAGATTAGGTACCTGGTCAA+TGG 0.533997 3.3:+71145683 None:intergenic
TATGGTCCTGATTGAACAAG+AGG 0.534402 3.3:-71142118 MS.gene75623:CDS
GCTTCACTACAAAGAGCAAT+GGG 0.535937 3.3:-71141895 MS.gene75623:CDS
AAAGATGTGGCTTAAATGTT+GGG 0.536867 3.3:-71146009 MS.gene75623:CDS
TGCTTGAATCCTTTCATTTG+GGG 0.537514 3.3:+71144760 None:intergenic
TCTCATCAGTTTGATTGTAT+CGG 0.538336 3.3:-71142577 MS.gene75623:CDS
TATGACCGCAGACGTGATGC+AGG 0.539120 3.3:-71141159 MS.gene75623:CDS
GGAAAACCTCCTCAACAAGA+TGG 0.540597 3.3:+71142754 None:intergenic
ACTTACACAACACTGAAAAG+AGG 0.541604 3.3:-71145836 MS.gene75623:CDS
CAGAAGGATTCTTAGCATGA+TGG 0.541718 3.3:+71145706 None:intergenic
TAGGAGATGGTGGAAAGATG+TGG 0.542063 3.3:-71146022 MS.gene75623:CDS
CTGAGGTTGCAGGATGAGGT+TGG 0.542365 3.3:+71142295 None:intergenic
AAAGAGTTAGGAGAAAATTG+TGG 0.543247 3.3:-71145926 MS.gene75623:CDS
AAAGTTAGCAGTTTATGTCT+CGG 0.543839 3.3:-71142992 MS.gene75623:intron
AGTGGTTTCCCAGTTGCTGA+TGG 0.544028 3.3:-71142678 MS.gene75623:CDS
GAAAGGATTCAAGCAACTGA+TGG 0.545412 3.3:-71144752 MS.gene75623:CDS
TAAGGGTGCTTCAATCTGAA+AGG 0.545666 3.3:-71145188 MS.gene75623:CDS
GGATGATTACCAAGAGATGA+TGG 0.546326 3.3:-71143635 MS.gene75623:CDS
AAGGGTGCTTCAATCTGAAA+GGG 0.547300 3.3:-71145187 MS.gene75623:CDS
AGGGATGATGAATATGCTCA+TGG 0.547816 3.3:-71143334 MS.gene75623:CDS
AGGGTGGAGTATTAAGAGGA+TGG 0.548363 3.3:-71145145 MS.gene75623:CDS
GTATCTTGTGCAAAGATGAC+AGG 0.548377 3.3:+71145039 None:intergenic
TATGCAACACCACTTGTAAG+TGG 0.549161 3.3:+71145216 None:intergenic
ATGAACCGGGTTCTGCTCCA+TGG 0.549463 3.3:+71145119 None:intergenic
ATTAGTATGGACACAAAGAT+GGG 0.549576 3.3:-71146050 None:intergenic
GCAATGGGTGTTGGGAACAA+AGG 0.550130 3.3:-71141880 MS.gene75623:CDS
AGCATTAGCAAGTGTTTAGT+GGG 0.550350 3.3:-71142441 MS.gene75623:CDS
GAAACATGCATCAAATTGAT+GGG 0.550648 3.3:+71141675 None:intergenic
AGCTTATAGGTGATCCTGGA+AGG 0.551023 3.3:-71142954 MS.gene75623:CDS
GATGAGATCATTGGAGGAGG+TGG 0.554361 3.3:+71142593 None:intergenic
CCATTTCCAAGGTTGGCGAC+GGG 0.554660 3.3:-71143739 MS.gene75623:CDS
TGCATCTCATGCTTCCTGAA+AGG 0.558589 3.3:+71144133 None:intergenic
AACAAAGGGAATCCTCGAAA+CGG 0.558711 3.3:-71141865 MS.gene75623:CDS
GTTTGTCCACCGTAACCGAT+GGG 0.559704 3.3:-71142155 MS.gene75623:CDS
GGGTGGCCTCAGCATAGTGA+TGG 0.560543 3.3:+71141696 None:intergenic
TTCAAATGCCTGAAATGGAT+GGG 0.561638 3.3:-71141645 MS.gene75623:intron
GGTTTGTCCACCGTAACCGA+TGG 0.562427 3.3:-71142156 MS.gene75623:CDS
GGCTTCACTACAAAGAGCAA+TGG 0.563329 3.3:-71141896 MS.gene75623:CDS
ATCATACACATTAACAAGCA+CGG 0.567202 3.3:+71144246 None:intergenic
AGATATCACATACAAAGGCT+TGG 0.567391 3.3:-71142213 MS.gene75623:CDS
GAATCCTTCTGCCATTGACC+AGG 0.567998 3.3:-71145694 MS.gene75623:intron
CAAATAATTACAAATCTCAT+GGG 0.572811 3.3:-71142925 MS.gene75623:CDS
TATTCTTCATGGATAGGGGA+TGG 0.574785 3.3:+71145066 None:intergenic
TCTCGACACTTCAGCACGAA+CGG 0.575293 3.3:+71142233 None:intergenic
GCAAGCATACTTGCTCTCAA+AGG 0.577203 3.3:+71141919 None:intergenic
AAAGGATTCAAGCAACTGAT+GGG 0.577305 3.3:-71144751 MS.gene75623:intron
GGAGCAGAACCCGGTTCATG+AGG 0.577743 3.3:-71145115 MS.gene75623:CDS
GATATTCACTCCATTCATGC+AGG 0.578156 3.3:-71142511 MS.gene75623:CDS
ATCTCAAGGAAAAGGAGTAG+AGG 0.580019 3.3:-71143124 MS.gene75623:intron
AAGAGGTCCCTCGTGACTGA+AGG 0.581373 3.3:+71142629 None:intergenic
AGCTGAACAACTTTATAGAG+AGG 0.581697 3.3:-71141078 MS.gene75623:CDS
CAAATGCTACCCCAAATGAA+AGG 0.586250 3.3:-71144769 MS.gene75623:CDS
GGATCACCTATAAGCTGTTG+AGG 0.588527 3.3:+71142961 None:intergenic
AACAATTTGAGAAGCAACAA+GGG 0.589239 3.3:-71145164 MS.gene75623:CDS
AGCATATTCTTCATGGATAG+GGG 0.589325 3.3:+71145062 None:intergenic
CACCAGGAATGCTCTAAGTG+TGG 0.589718 3.3:-71141131 MS.gene75623:CDS
CAAACTGATGAGATCATTGG+AGG 0.589840 3.3:+71142587 None:intergenic
CGAGCAAGAGAATCAGGCAA+AGG 0.590048 3.3:-71144878 MS.gene75623:CDS
CATGCATCAAATTGATGGGG+TGG 0.590211 3.3:+71141679 None:intergenic
CCATCCATCTCGAGAAAACA+CGG 0.590517 3.3:-71142483 MS.gene75623:CDS
GCATGTGTGATGAAAGGGCT+AGG 0.590921 3.3:-71145797 MS.gene75623:CDS
CAACAAGGAGTGCAATAACA+AGG 0.591437 3.3:+71143701 None:intergenic
TGCGGCGACCATCAGCAACT+GGG 0.592339 3.3:+71142670 None:intergenic
GTTTGGCAGTTCACAGACAA+AGG 0.593004 3.3:-71142795 MS.gene75623:intron
TTTGAGAGCAAGTATGCTTG+CGG 0.593125 3.3:-71141917 MS.gene75623:CDS
CTCTGAATCCTTCCCAGCTG+CGG 0.594301 3.3:+71142652 None:intergenic
GGATACCATGGAGCAGAACC+CGG 0.595639 3.3:-71145124 MS.gene75623:CDS
GTCGCCAACCTTGGAAATGG+TGG 0.598690 3.3:+71143742 None:intergenic
CATAATCATCCTCATGAACC+GGG 0.599931 3.3:+71145106 None:intergenic
GAACAATTTGAGAAGCAACA+AGG 0.603982 3.3:-71145165 MS.gene75623:CDS
TGTAGCCTGCATCACGTCTG+CGG 0.606500 3.3:+71141154 None:intergenic
GCTATGCAGGTATCTTGGTG+GGG 0.608136 3.3:-71144326 MS.gene75623:intron
ATCCGATTTCTCCATTCATG+AGG 0.608906 3.3:+71142418 None:intergenic
TATTAAGAGGATGGATACCA+TGG 0.611537 3.3:-71145136 MS.gene75623:CDS
TGGTGTTGCATATGCTGTAA+GGG 0.613148 3.3:-71145205 MS.gene75623:CDS
TGCATCCCCATCGGTTACGG+TGG 0.616687 3.3:+71142149 None:intergenic
ACCAGGAATGCTCTAAGTGT+GGG 0.617004 3.3:-71141130 MS.gene75623:CDS
TTTGAGAGGCCACTTACAAG+TGG 0.618617 3.3:-71145225 MS.gene75623:CDS
ACTGATGAGATCATTGGAGG+AGG 0.619983 3.3:+71142590 None:intergenic
GAGTCGAATTGCCAAAGTAG+AGG 0.627075 3.3:-71143656 MS.gene75623:CDS
TGTCGAGATATCACATACAA+AGG 0.627297 3.3:-71142218 MS.gene75623:CDS
ATTGATAGATGCATCCCCAT+CGG 0.631985 3.3:+71142140 None:intergenic
GAATATGTCAGAACCGCACA+AGG 0.636751 3.3:-71143285 MS.gene75623:CDS
GGTACCTGGTCAATGGCAGA+AGG 0.637480 3.3:+71145690 None:intergenic
TGATAATAGTGTGAATCGCA+CGG 0.638695 3.3:-71141782 MS.gene75623:CDS
CATGACAAATATGTCCAACA+AGG 0.639906 3.3:+71143686 None:intergenic
GAGTTAGGAGAAAATTGTGG+AGG 0.641276 3.3:-71145923 MS.gene75623:CDS
TCTTGTAAACAGCAAATGTG+AGG 0.641788 3.3:+71144804 None:intergenic
ATCATCGGCTGCGACTCTAG+AGG 0.643962 3.3:+71142531 None:intergenic
ATTCAGAGCCTTCAGTCACG+AGG 0.647455 3.3:-71142637 MS.gene75623:CDS
ATCTGGTAAGATAGAGCTCG+AGG 0.650296 3.3:-71143205 MS.gene75623:CDS
GGAATGCTCTAAGTGTGGGA+TGG 0.650848 3.3:-71141126 MS.gene75623:CDS
CCTCGAAACGGAGAACATCA+GGG 0.651041 3.3:-71141853 MS.gene75623:CDS
TCGGTAGAGGATACAGGCGA+TGG 0.653480 3.3:-71142558 MS.gene75623:CDS
AGTTGAGATCAGAATAGACA+TGG 0.657095 3.3:+71145731 None:intergenic
ATGAATGGAGTGAATATCAT+CGG 0.658951 3.3:+71142516 None:intergenic
TTCAGAGCCTTCAGTCACGA+GGG 0.661654 3.3:-71142636 MS.gene75623:CDS
AATTTGAGAAGCAACAAGGG+TGG 0.662837 3.3:-71145161 MS.gene75623:CDS
GAGATCAGAACTCCAATGAA+CGG 0.671093 3.3:-71143455 MS.gene75623:CDS
TAGAAGCCATCACTATGCTG+AGG 0.678727 3.3:-71141702 MS.gene75623:CDS
AGCAAGAGAATCAGGCAAAG+GGG 0.689158 3.3:-71144876 MS.gene75623:CDS
TTTGTCCACCGTAACCGATG+GGG 0.692151 3.3:-71142154 MS.gene75623:CDS
AGCCATACCATTAAACTCTG+AGG 0.695139 3.3:+71142278 None:intergenic
GATACATCAGAACCATACAT+GGG 0.696609 3.3:+71144199 None:intergenic
TCTCGTGCGAAACAGTAGCA+AGG 0.699858 3.3:+71143474 None:intergenic
GGTGTGGTTTGTGTAAGCAG+TGG 0.702118 3.3:-71141727 MS.gene75623:CDS
AAACATGCATCAAATTGATG+GGG 0.720884 3.3:+71141676 None:intergenic
TTCACTCCATTCATGCAGGT+AGG 0.724284 3.3:-71142507 MS.gene75623:CDS
GTGGACGAGAAAGAACCAAG+AGG 0.763430 3.3:+71142612 None:intergenic
TCCATCTCGAGAAAACACGG+AGG 0.824559 3.3:-71142480 MS.gene75623:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTAAATTTTTATTTATTT+AGG - chr3.3:71143549-71143568 MS.gene75623:intron 0.0%
!!! ATGAATTAACTTTGAAATAA+TGG - chr3.3:71143047-71143066 MS.gene75623:intron 15.0%
!!! TAAAATTTGATTTCTAAGTA+CGG + chr3.3:71143077-71143096 None:intergenic 15.0%
!!! TAAACTGTTATGATATTTTA+AGG - chr3.3:71143303-71143322 MS.gene75623:CDS 15.0%
!!! TTTGACTTTATTTTATCTTT+TGG - chr3.3:71142555-71142574 MS.gene75623:CDS 15.0%
!! AACTAAAATATGCAATTGTT+TGG - chr3.3:71144284-71144303 MS.gene75623:CDS 20.0%
!! AATTGAAAAACTAAGTGATT+TGG + chr3.3:71141645-71141664 None:intergenic 20.0%
!! ACAAATAATTACAAATCTCA+TGG - chr3.3:71144170-71144189 MS.gene75623:CDS 20.0%
!! CAAATAATTACAAATCTCAT+GGG - chr3.3:71144171-71144190 MS.gene75623:CDS 20.0%
!! TCAAATAAGTGAATCTAAAT+AGG + chr3.3:71142400-71142419 None:intergenic 20.0%
!! TTCAAAGTTAATTCATCATA+AGG + chr3.3:71143043-71143062 None:intergenic 20.0%
!!! GTCAATTATAAATGAAGTTT+TGG - chr3.3:71143852-71143871 MS.gene75623:intron 20.0%
!!! GTTTGGTTTTATTCTTTTTT+GGG - chr3.3:71144078-71144097 MS.gene75623:intron 20.0%
!!! TGTTTGGTTTTATTCTTTTT+TGG - chr3.3:71144077-71144096 MS.gene75623:intron 20.0%
!!! TTAACGAGAATAAATAGTTT+TGG + chr3.3:71145090-71145109 None:intergenic 20.0%
! AAGTTAGCTAATTCTGATTT+AGG + chr3.3:71142664-71142683 None:intergenic 25.0%
! AATAAGCTGAAAACAACTTA+TGG + chr3.3:71142478-71142497 None:intergenic 25.0%
! CTTAAAACTTGAAAATCAGA+AGG + chr3.3:71141695-71141714 None:intergenic 25.0%
! GTATTCTAACTTCACAAAAT+AGG + chr3.3:71145658-71145677 None:intergenic 25.0%
! TATTTCCATAAGCTTATCTT+GGG - chr3.3:71142494-71142513 MS.gene75623:CDS 25.0%
! TTATTTCCATAAGCTTATCT+TGG - chr3.3:71142493-71142512 MS.gene75623:CDS 25.0%
! TTTCAGAATCATAACTTAAC+AGG - chr3.3:71144047-71144066 MS.gene75623:intron 25.0%
! TTTCATTGAAAACTCTTTCT+AGG - chr3.3:71145534-71145553 MS.gene75623:intron 25.0%
!! AAACTTGTGATACACTATTT+TGG - chr3.3:71143240-71143259 MS.gene75623:CDS 25.0%
!! AACTTGTGATACACTATTTT+GGG - chr3.3:71143241-71143260 MS.gene75623:CDS 25.0%
!! CAAGTTTTTGTGAATATGAA+CGG - chr3.3:71145587-71145606 MS.gene75623:intron 25.0%
!! TGATTCTGAAAATTTCAACA+TGG + chr3.3:71144038-71144057 None:intergenic 25.0%
!!! AAAGTTGTTGAAGTTGATAA+AGG - chr3.3:71145051-71145070 MS.gene75623:CDS 25.0%
!!! AGTGTATCACAAGTTTTATA+AGG + chr3.3:71143236-71143255 None:intergenic 25.0%
!!! ATATGTTTTGGAATTTGTCA+AGG - chr3.3:71142373-71142392 MS.gene75623:CDS 25.0%
!!! TATGTTTTGGAATTTGTCAA+GGG - chr3.3:71142374-71142393 MS.gene75623:CDS 25.0%
!!! TTAACTTGTTTATCCAAACT+TGG - chr3.3:71142638-71142657 MS.gene75623:CDS 25.0%
!!! TTCTTAACTTGTTCATATAC+AGG - chr3.3:71142175-71142194 MS.gene75623:CDS 25.0%
AAACATGCATCAAATTGATG+GGG + chr3.3:71145423-71145442 None:intergenic 30.0%
AAAGAGTTAGGAGAAAATTG+TGG - chr3.3:71141170-71141189 MS.gene75623:CDS 30.0%
AAAGATGTGGCTTAAATGTT+GGG - chr3.3:71141087-71141106 MS.gene75623:CDS 30.0%
AAAGTTAGCAGTTTATGTCT+CGG - chr3.3:71144104-71144123 MS.gene75623:intron 30.0%
AACAATTTGAGAAGCAACAA+GGG - chr3.3:71141932-71141951 MS.gene75623:CDS 30.0%
AAGAAACCATAGATATACTC+GGG + chr3.3:71143710-71143729 None:intergenic 30.0%
AATCAAACTGATGAGATCAT+TGG + chr3.3:71144515-71144534 None:intergenic 30.0%
ATATCTATTGATGTGCTTTC+TGG - chr3.3:71142093-71142112 MS.gene75623:CDS 30.0%
ATCATACACATTAACAAGCA+CGG + chr3.3:71142853-71142872 None:intergenic 30.0%
ATGAATGGAGTGAATATCAT+CGG + chr3.3:71144583-71144602 None:intergenic 30.0%
ATTTGAATTAGGACATGCAT+TGG + chr3.3:71144755-71144774 None:intergenic 30.0%
CAACAGTATTATCAGTGTAT+TGG - chr3.3:71141142-71141161 MS.gene75623:CDS 30.0%
CATAAGGACAGAAACTTATT+TGG + chr3.3:71143027-71143046 None:intergenic 30.0%
CTTGTAAATTAGTCCACAAA+AGG + chr3.3:71144252-71144271 None:intergenic 30.0%
GAAAATCCAATTTAAGAGCA+TGG + chr3.3:71143742-71143761 None:intergenic 30.0%
GAAACATGCATCAAATTGAT+GGG + chr3.3:71145424-71145443 None:intergenic 30.0%
GAAGAAACCATAGATATACT+CGG + chr3.3:71143711-71143730 None:intergenic 30.0%
GGACAAATATTGTTTAAGTC+AGG - chr3.3:71141559-71141578 MS.gene75623:intron 30.0%
GTTTCTTGTGAGATTATATG+TGG - chr3.3:71142124-71142143 MS.gene75623:CDS 30.0%
TAAAGTTGTTCAGCTTCAAA+TGG + chr3.3:71146013-71146032 None:intergenic 30.0%
TAATATCCCGAGTATATCTA+TGG - chr3.3:71143701-71143720 MS.gene75623:CDS 30.0%
TACACTGATAATACTGTTGA+TGG + chr3.3:71141141-71141160 None:intergenic 30.0%
TCAATTTGATGCATGTTTCA+TGG - chr3.3:71145425-71145444 MS.gene75623:intron 30.0%
TCACAAAATAGGTCAAAAAC+AGG + chr3.3:71145647-71145666 None:intergenic 30.0%
TCTCATCAGTTTGATTGTAT+CGG - chr3.3:71144519-71144538 MS.gene75623:intron 30.0%
TGAAACATGCATCAAATTGA+TGG + chr3.3:71145425-71145444 None:intergenic 30.0%
TGAGATTATATGTGGAGTTA+TGG - chr3.3:71142132-71142151 MS.gene75623:CDS 30.0%
TGATTATGTACCAGATGAAT+TGG - chr3.3:71142005-71142024 MS.gene75623:CDS 30.0%
TTGCTTGAATCCTTTCATTT+GGG + chr3.3:71142340-71142359 None:intergenic 30.0%
! ACTTGTGATACACTATTTTG+GGG - chr3.3:71143242-71143261 MS.gene75623:CDS 30.0%
! ATAGTTTCAGATTTGAAGCA+AGG - chr3.3:71144919-71144938 MS.gene75623:intron 30.0%
! ATTGATTCAGCTCATATCAT+TGG + chr3.3:71143586-71143605 None:intergenic 30.0%
! GCTCTTAAATTGGATTTTCA+GGG - chr3.3:71143743-71143762 MS.gene75623:CDS 30.0%
! GTTTGAAATAGAGTCATTAG+TGG - chr3.3:71142794-71142813 MS.gene75623:intron 30.0%
! GTTTGAAGCTCATTTGAATT+AGG + chr3.3:71144766-71144785 None:intergenic 30.0%
! TGCTCTTAAATTGGATTTTC+AGG - chr3.3:71143742-71143761 MS.gene75623:CDS 30.0%
! TTCTGAAAATTTCAACATGG+TGG + chr3.3:71144035-71144054 None:intergenic 30.0%
! TTGTTTTCAACAGCCTAAAA+GGG + chr3.3:71142256-71142275 None:intergenic 30.0%
!! AACTCTTTCTAGGATGAAAA+TGG - chr3.3:71145544-71145563 MS.gene75623:intron 30.0%
!! CTATTTTCTGAGAAATCTCA+AGG - chr3.3:71143958-71143977 MS.gene75623:intron 30.0%
!! GTATTGGTTCTAAAAGAGTT+AGG - chr3.3:71141158-71141177 MS.gene75623:CDS 30.0%
!! TTTGTTTTCAACAGCCTAAA+AGG + chr3.3:71142257-71142276 None:intergenic 30.0%
!!! ACGAGAATAAATAGTTTTGG+AGG + chr3.3:71145087-71145106 None:intergenic 30.0%
!!! TATAAATGAAGTTTTGGACC+AGG - chr3.3:71143858-71143877 MS.gene75623:intron 30.0%
AAAGGATTCAAGCAACTGAT+GGG - chr3.3:71142345-71142364 MS.gene75623:CDS 35.0%
AAATGTTGGGAGAAGATCTT+GGG - chr3.3:71141100-71141119 MS.gene75623:CDS 35.0%
AACCTCAGAGTTTAATGGTA+TGG - chr3.3:71144816-71144835 MS.gene75623:CDS 35.0%
AAGCATTAGCAAGTGTTTAG+TGG - chr3.3:71144654-71144673 MS.gene75623:intron 35.0%
ACAACAAAAATTGCAGACCT+GGG + chr3.3:71143526-71143545 None:intergenic 35.0%
ACATAATCATCCTCATGAAC+CGG + chr3.3:71141994-71142013 None:intergenic 35.0%
ACTTACACAACACTGAAAAG+AGG - chr3.3:71141260-71141279 MS.gene75623:intron 35.0%
AGACAGTGAGTAGTAAGATT+AGG + chr3.3:71141430-71141449 None:intergenic 35.0%
AGATATCACATACAAAGGCT+TGG - chr3.3:71144883-71144902 MS.gene75623:CDS 35.0%
AGCATATTCTTCATGGATAG+GGG + chr3.3:71142037-71142056 None:intergenic 35.0%
AGCATTAGCAAGTGTTTAGT+GGG - chr3.3:71144655-71144674 MS.gene75623:intron 35.0%
AGCTGAACAACTTTATAGAG+AGG - chr3.3:71146018-71146037 MS.gene75623:CDS 35.0%
AGTTGAGATCAGAATAGACA+TGG + chr3.3:71141368-71141387 None:intergenic 35.0%
ATGATAAGTGTTTGCGCTTT+AGG - chr3.3:71142608-71142627 MS.gene75623:CDS 35.0%
ATGCTAAAGACGAATTGTTC+AGG + chr3.3:71141602-71141621 None:intergenic 35.0%
ATGTGAGGATAACTCCTAAA+CGG + chr3.3:71142280-71142299 None:intergenic 35.0%
ATTATTTGTCGAAACCTTCC+AGG + chr3.3:71144159-71144178 None:intergenic 35.0%
ATTCAAATGCCTGAAATGGA+TGG - chr3.3:71145450-71145469 MS.gene75623:intron 35.0%
ATTCTGATTTAGGCCAAGTT+TGG + chr3.3:71142654-71142673 None:intergenic 35.0%
CAAAAGGAACGAGTTTAAAG+AGG + chr3.3:71144236-71144255 None:intergenic 35.0%
CATGACAAATATGTCCAACA+AGG + chr3.3:71143413-71143432 None:intergenic 35.0%
CATGTGAGCTTTCTTAACTT+TGG - chr3.3:71142936-71142955 MS.gene75623:CDS 35.0%
CGAGTTTAAAGAGGTTTGAT+AGG + chr3.3:71144227-71144246 None:intergenic 35.0%
CGCACTTTGTGAATAACATT+AGG - chr3.3:71145028-71145047 MS.gene75623:CDS 35.0%
CTCTCTCAACTTCTATTGAA+TGG + chr3.3:71144366-71144385 None:intergenic 35.0%
CTGTTGAAAACAAACCGTTT+AGG - chr3.3:71142263-71142282 MS.gene75623:CDS 35.0%
GAAAGATGTGGCTTAAATGT+TGG - chr3.3:71141086-71141105 MS.gene75623:CDS 35.0%
GAACAATTTGAGAAGCAACA+AGG - chr3.3:71141931-71141950 MS.gene75623:CDS 35.0%
GAGCATATTCTTCATGGATA+GGG + chr3.3:71142038-71142057 None:intergenic 35.0%
GATACATCAGAACCATACAT+GGG + chr3.3:71142900-71142919 None:intergenic 35.0%
GATGCAGAACATACATTAAG+TGG - chr3.3:71144400-71144419 MS.gene75623:intron 35.0%
GCGTAAACAATTCATGAACA+TGG - chr3.3:71142729-71142748 MS.gene75623:CDS 35.0%
GGATATTCAAATGCCTGAAA+TGG - chr3.3:71145446-71145465 MS.gene75623:intron 35.0%
GTGAGCAACTTTATTCGATT+TGG - chr3.3:71142707-71142726 MS.gene75623:CDS 35.0%
GTTCGATATACGAGCAATTA+TGG - chr3.3:71143921-71143940 MS.gene75623:intron 35.0%
GTTGCTTGAATCCTTTCATT+TGG + chr3.3:71142341-71142360 None:intergenic 35.0%
TAAATGTTGGGAGAAGATCT+TGG - chr3.3:71141099-71141118 MS.gene75623:CDS 35.0%
TAACCTAAAACACCGTTCAT+TGG + chr3.3:71143656-71143675 None:intergenic 35.0%
TACTCACTGTCTTGCAATTA+AGG - chr3.3:71141438-71141457 MS.gene75623:intron 35.0%
TATTAAGAGGATGGATACCA+TGG - chr3.3:71141960-71141979 MS.gene75623:CDS 35.0%
TCTGAGAAATCTCAAGGAAA+AGG - chr3.3:71143964-71143983 MS.gene75623:intron 35.0%
TCTGCATACTCTGTTACAAT+AGG - chr3.3:71143151-71143170 MS.gene75623:CDS 35.0%
TCTTGTAAACAGCAAATGTG+AGG + chr3.3:71142295-71142314 None:intergenic 35.0%
TGATAATAGTGTGAATCGCA+CGG - chr3.3:71145314-71145333 MS.gene75623:intron 35.0%
TGATACATCAGAACCATACA+TGG + chr3.3:71142901-71142920 None:intergenic 35.0%
TGCTTGAATCCTTTCATTTG+GGG + chr3.3:71142339-71142358 None:intergenic 35.0%
TGTCGAGATATCACATACAA+AGG - chr3.3:71144878-71144897 MS.gene75623:CDS 35.0%
TTCAAATGCCTGAAATGGAT+GGG - chr3.3:71145451-71145470 MS.gene75623:intron 35.0%
! AGTGTGCTAAGTTTTGCAAT+TGG + chr3.3:71145746-71145765 None:intergenic 35.0%
! CTTTAAACTCGTTCCTTTTG+TGG - chr3.3:71144236-71144255 MS.gene75623:CDS 35.0%
! GACACAAAGATGGGATTTTT+AGG - chr3.3:71141055-71141074 MS.gene75623:CDS 35.0%
! GGTTCTGACATATTCTTGTT+GGG + chr3.3:71143806-71143825 None:intergenic 35.0%
! GTTGGTTTATAGTGTCTCTA+TGG - chr3.3:71141221-71141240 MS.gene75623:CDS 35.0%
! GTTTGTTCATCTACCCATTT+TGG - chr3.3:71145913-71145932 MS.gene75623:CDS 35.0%
! TATTGATGTGCTTTCTGGAA+AGG - chr3.3:71142098-71142117 MS.gene75623:CDS 35.0%
! TGTTTTCAACAGCCTAAAAG+GGG + chr3.3:71142255-71142274 None:intergenic 35.0%
! TTAACTTTGGAGATCCTTTC+AGG - chr3.3:71142949-71142968 MS.gene75623:CDS 35.0%
! TTGGTAATCATCCTCTACTT+TGG + chr3.3:71143454-71143473 None:intergenic 35.0%
! TTTTAAGCACCATCATCTCT+TGG + chr3.3:71143473-71143492 None:intergenic 35.0%
!! AAAGGTTTTGTGACAACTGT+TGG + chr3.3:71145162-71145181 None:intergenic 35.0%
!! AAGATGGGATTTTTAGGAGA+TGG - chr3.3:71141061-71141080 MS.gene75623:CDS 35.0%
!! ATGTATGGTTCTGATGTATC+AGG - chr3.3:71142900-71142919 MS.gene75623:intron 35.0%
!! GCTGGTGCTTTGAAAAAATA+TGG - chr3.3:71145342-71145361 MS.gene75623:intron 35.0%
!! GCTTTGAAAAAATATGGAGC+TGG - chr3.3:71145348-71145367 MS.gene75623:intron 35.0%
!! TGATGGGTGTGTATATGTTT+TGG - chr3.3:71142361-71142380 MS.gene75623:CDS 35.0%
!!! GTTTTAACTAACTGCTATGC+AGG - chr3.3:71142757-71142776 MS.gene75623:CDS 35.0%
!!! TTCTTTTAGAGCGAGTTCTA+CGG - chr3.3:71145119-71145138 MS.gene75623:CDS 35.0%
AAACTTGAATCTGTGACTGC+AGG + chr3.3:71145574-71145593 None:intergenic 40.0%
AACAAAGGGAATCCTCGAAA+CGG - chr3.3:71145231-71145250 MS.gene75623:CDS 40.0%
AACAGAAACCACCATTTCCA+AGG - chr3.3:71143346-71143365 MS.gene75623:intron 40.0%
AAGATTAGGTACCTGGTCAA+TGG + chr3.3:71141416-71141435 None:intergenic 40.0%
AATGCATACCCATCCATTTC+AGG + chr3.3:71145462-71145481 None:intergenic 40.0%
AATTTGAGAAGCAACAAGGG+TGG - chr3.3:71141935-71141954 MS.gene75623:CDS 40.0%
AGAGGTTTGATAGGACTCAA+TGG + chr3.3:71144218-71144237 None:intergenic 40.0%
AGCCATACCATTAAACTCTG+AGG + chr3.3:71144821-71144840 None:intergenic 40.0%
AGCTACCCAAGATAAGCTTA+TGG + chr3.3:71142502-71142521 None:intergenic 40.0%
AGCTAGCATGTGTGATGAAA+GGG - chr3.3:71141294-71141313 MS.gene75623:intron 40.0%
AGGGATGATGAATATGCTCA+TGG - chr3.3:71143762-71143781 MS.gene75623:intron 40.0%
ATAGTCGCACATCATTCACA+TGG + chr3.3:71145708-71145727 None:intergenic 40.0%
ATCCGATTTCTCCATTCATG+AGG + chr3.3:71144681-71144700 None:intergenic 40.0%
ATCTCAAGGAAAAGGAGTAG+AGG - chr3.3:71143972-71143991 MS.gene75623:intron 40.0%
ATGAACGGTTCGATCTTGAT+TGG - chr3.3:71145602-71145621 MS.gene75623:intron 40.0%
ATTGATAGATGCATCCCCAT+CGG + chr3.3:71144959-71144978 None:intergenic 40.0%
ATTGTGGAGGAAATTGTTGC+TGG - chr3.3:71141186-71141205 MS.gene75623:CDS 40.0%
CAAACTGATGAGATCATTGG+AGG + chr3.3:71144512-71144531 None:intergenic 40.0%
CAAATGCTACCCCAAATGAA+AGG - chr3.3:71142327-71142346 MS.gene75623:CDS 40.0%
CAGAACCATACATGGGAATT+GGG + chr3.3:71142893-71142912 None:intergenic 40.0%
CAGAAGGATTCTTAGCATGA+TGG + chr3.3:71141393-71141412 None:intergenic 40.0%
CATAATCATCCTCATGAACC+GGG + chr3.3:71141993-71142012 None:intergenic 40.0%
CCATGACCATGCTCTTAAAT+TGG - chr3.3:71143733-71143752 MS.gene75623:CDS 40.0%
CCTGATTGAACAAGAGGTTT+GGG - chr3.3:71144984-71145003 MS.gene75623:intron 40.0%
CTTAACAGGCTTTACGTGTT+TGG - chr3.3:71144061-71144080 MS.gene75623:intron 40.0%
GAAAAAATATGGAGCTGGTG+TGG - chr3.3:71145353-71145372 MS.gene75623:intron 40.0%
GAAAGGATTCAAGCAACTGA+TGG - chr3.3:71142344-71142363 MS.gene75623:CDS 40.0%
GACAACAAAAATTGCAGACC+TGG + chr3.3:71143527-71143546 None:intergenic 40.0%
GAGATCAGAACTCCAATGAA+CGG - chr3.3:71143641-71143660 MS.gene75623:CDS 40.0%
GAGTAGTAAGATTAGGTACC+TGG + chr3.3:71141423-71141442 None:intergenic 40.0%
GAGTTAGGAGAAAATTGTGG+AGG - chr3.3:71141173-71141192 MS.gene75623:CDS 40.0%
GATATTCACTCCATTCATGC+AGG - chr3.3:71144585-71144604 MS.gene75623:intron 40.0%
GCTAATAACCATTTCCCAAC+AGG - chr3.3:71145834-71145853 MS.gene75623:CDS 40.0%
GCTTCACTACAAAGAGCAAT+GGG - chr3.3:71145201-71145220 MS.gene75623:CDS 40.0%
GGAGCATATTCTTCATGGAT+AGG + chr3.3:71142039-71142058 None:intergenic 40.0%
GGATGATTACCAAGAGATGA+TGG - chr3.3:71143461-71143480 MS.gene75623:CDS 40.0%
GTATCTTGTGCAAAGATGAC+AGG + chr3.3:71142060-71142079 None:intergenic 40.0%
GTCAGGAGGTAAGTAAAGTA+TGG - chr3.3:71141538-71141557 MS.gene75623:intron 40.0%
TAACTGCTATGCAGGTATCT+TGG - chr3.3:71142765-71142784 MS.gene75623:CDS 40.0%
TACAAAGAGCAATGGGTGTT+GGG - chr3.3:71145208-71145227 MS.gene75623:CDS 40.0%
TACCAGATTCAATCTTTGCC+TGG + chr3.3:71143879-71143898 None:intergenic 40.0%
TACCTCCTGACTCAATTATC+AGG + chr3.3:71141529-71141548 None:intergenic 40.0%
TAGCTAGCATGTGTGATGAA+AGG - chr3.3:71141293-71141312 MS.gene75623:intron 40.0%
TAGTCGCACATCATTCACAT+GGG + chr3.3:71145707-71145726 None:intergenic 40.0%
TATGCAACACCACTTGTAAG+TGG + chr3.3:71141883-71141902 None:intergenic 40.0%
TATGGTCCTGATTGAACAAG+AGG - chr3.3:71144978-71144997 MS.gene75623:intron 40.0%
TATTCTTCATGGATAGGGGA+TGG + chr3.3:71142033-71142052 None:intergenic 40.0%
TCAGAACCATACATGGGAAT+TGG + chr3.3:71142894-71142913 None:intergenic 40.0%
TCCTGACTCAATTATCAGGA+GGG + chr3.3:71141525-71141544 None:intergenic 40.0%
TCCTGATTGAACAAGAGGTT+TGG - chr3.3:71144983-71145002 MS.gene75623:intron 40.0%
TCTCATGGGTAACTCGATTA+AGG - chr3.3:71144185-71144204 MS.gene75623:CDS 40.0%
TGGGGATGCATCTATCAATA+TGG - chr3.3:71144960-71144979 MS.gene75623:intron 40.0%
TGTGACTATCCATCTTGTTG+AGG - chr3.3:71144333-71144352 MS.gene75623:intron 40.0%
TTTGAGAGCAAGTATGCTTG+CGG - chr3.3:71145179-71145198 MS.gene75623:CDS 40.0%
! AACAAGGGTGGAGTATTAAG+AGG - chr3.3:71141947-71141966 MS.gene75623:CDS 40.0%
! ACTAAGTGATTTGGCTCAAC+AGG + chr3.3:71141636-71141655 None:intergenic 40.0%
! ACTCCAATGAACGGTGTTTT+AGG - chr3.3:71143650-71143669 MS.gene75623:CDS 40.0%
! ATTGTATCGGTAGAGGATAC+AGG - chr3.3:71144532-71144551 MS.gene75623:intron 40.0%
! CAACAAGGAGTGCAATAACA+AGG + chr3.3:71143398-71143417 None:intergenic 40.0%
! CAGTTTGATTGTATCGGTAG+AGG - chr3.3:71144525-71144544 MS.gene75623:intron 40.0%
! CCAATTTAAGAGCATGGTCA+TGG + chr3.3:71143736-71143755 None:intergenic 40.0%
! CGGTTCTGACATATTCTTGT+TGG + chr3.3:71143807-71143826 None:intergenic 40.0%
! GTGTCTCTATGGATCTTTTG+TGG - chr3.3:71141232-71141251 MS.gene75623:CDS 40.0%
! TCATTTGGGGTAGCATTTGA+TGG + chr3.3:71142326-71142345 None:intergenic 40.0%
! TGACAGGAGCATATTCTTCA+TGG + chr3.3:71142044-71142063 None:intergenic 40.0%
! TTGCTCGCAACACATTTTCA+CGG + chr3.3:71142205-71142224 None:intergenic 40.0%
!! AAGGGTGCTTCAATCTGAAA+GGG - chr3.3:71141909-71141928 MS.gene75623:CDS 40.0%
!! ATGGGATTTTTAGGAGATGG+TGG - chr3.3:71141064-71141083 MS.gene75623:CDS 40.0%
!! CAGAAAGAACTGCTTTTGAG+AGG - chr3.3:71141857-71141876 MS.gene75623:CDS 40.0%
!! CTTGTTATTGCACTCCTTGT+TGG - chr3.3:71143396-71143415 MS.gene75623:intron 40.0%
!! GTGAAAGTGCTTCCAATCTT+CGG + chr3.3:71144715-71144734 None:intergenic 40.0%
!! TAAGGGTGCTTCAATCTGAA+AGG - chr3.3:71141908-71141927 MS.gene75623:CDS 40.0%
!! TGGTGTTGCATATGCTGTAA+GGG - chr3.3:71141891-71141910 MS.gene75623:CDS 40.0%
!! TTTAAGGTTGATGCTGACAC+AGG - chr3.3:71143319-71143338 MS.gene75623:CDS 40.0%
AAACACGGAGGAACTGGTAT+TGG - chr3.3:71144628-71144647 MS.gene75623:intron 45.0%
ACACACCCAATTCCCATGTA+TGG - chr3.3:71142885-71142904 MS.gene75623:intron 45.0%
ACCCTCCTGATAATTGAGTC+AGG - chr3.3:71141521-71141540 MS.gene75623:intron 45.0%
ACTGATGAGATCATTGGAGG+AGG + chr3.3:71144509-71144528 None:intergenic 45.0%
AGCAAGAGAATCAGGCAAAG+GGG - chr3.3:71142220-71142239 MS.gene75623:CDS 45.0%
AGCAGTTTATGTCTCGGATC+AGG - chr3.3:71144110-71144129 MS.gene75623:intron 45.0%
AGCTGATGTTGCTAAATCCC+AGG - chr3.3:71143506-71143525 MS.gene75623:intron 45.0%
AGCTTATAGGTGATCCTGGA+AGG - chr3.3:71144142-71144161 MS.gene75623:CDS 45.0%
ATCTGGTAAGATAGAGCTCG+AGG - chr3.3:71143891-71143910 MS.gene75623:intron 45.0%
ATGTGCGACTATTTGACTGC+AGG - chr3.3:71145716-71145735 MS.gene75623:CDS 45.0%
CAACAGCTTATAGGTGATCC+TGG - chr3.3:71144138-71144157 MS.gene75623:CDS 45.0%
CAGGTTCCTCAACAGCTTAT+AGG - chr3.3:71144129-71144148 MS.gene75623:CDS 45.0%
CATGCATCAAATTGATGGGG+TGG + chr3.3:71145420-71145439 None:intergenic 45.0%
CCATCCATCTCGAGAAAACA+CGG - chr3.3:71144613-71144632 MS.gene75623:intron 45.0%
CCCAAACCTCTTGTTCAATC+AGG + chr3.3:71144987-71145006 None:intergenic 45.0%
CCTGCAACCTCAGAGTTTAA+TGG - chr3.3:71144811-71144830 MS.gene75623:CDS 45.0%
CTACAAAGAGCAATGGGTGT+TGG - chr3.3:71145207-71145226 MS.gene75623:CDS 45.0%
CTCCTGACTCAATTATCAGG+AGG + chr3.3:71141526-71141545 None:intergenic 45.0%
CTCCTGATAATTGAGTCAGG+AGG - chr3.3:71141524-71141543 MS.gene75623:intron 45.0%
CTCTCAAGCATCTTCTCTCT+GGG - chr3.3:71145271-71145290 MS.gene75623:intron 45.0%
GAAACCACCATTTCCAAGGT+TGG - chr3.3:71143350-71143369 MS.gene75623:intron 45.0%
GAATATGTCAGAACCGCACA+AGG - chr3.3:71143811-71143830 MS.gene75623:intron 45.0%
GACCAGGCAAAGATTGAATC+TGG - chr3.3:71143874-71143893 MS.gene75623:intron 45.0%
GACTATCCATCTTGTTGAGG+AGG - chr3.3:71144336-71144355 MS.gene75623:intron 45.0%
GAGCAAGAGAATCAGGCAAA+GGG - chr3.3:71142219-71142238 MS.gene75623:CDS 45.0%
GAGGAAATTGTTGCTGGCAT+GGG - chr3.3:71141192-71141211 MS.gene75623:CDS 45.0%
GAGTCGAATTGCCAAAGTAG+AGG - chr3.3:71143440-71143459 MS.gene75623:intron 45.0%
GCAAGCATACTTGCTCTCAA+AGG + chr3.3:71145180-71145199 None:intergenic 45.0%
GCTTCAAACCTGTTGGGAAA+TGG + chr3.3:71145845-71145864 None:intergenic 45.0%
GGAAAACCTCCTCAACAAGA+TGG + chr3.3:71144345-71144364 None:intergenic 45.0%
GGATCACCTATAAGCTGTTG+AGG + chr3.3:71144138-71144157 None:intergenic 45.0%
GGCCTCATGAATGGAGAAAT+CGG - chr3.3:71144676-71144695 MS.gene75623:intron 45.0%
GGCTTCACTACAAAGAGCAA+TGG - chr3.3:71145200-71145219 MS.gene75623:CDS 45.0%
GTTTGGCAGTTCACAGACAA+AGG - chr3.3:71144301-71144320 MS.gene75623:CDS 45.0%
TAGAAGCCATCACTATGCTG+AGG - chr3.3:71145394-71145413 MS.gene75623:intron 45.0%
TCTCTCAAGCATCTTCTCTC+TGG - chr3.3:71145270-71145289 MS.gene75623:intron 45.0%
TCTGCGGTCATAGCCAAAAT+GGG + chr3.3:71145929-71145948 None:intergenic 45.0%
TGCATCTCATGCTTCCTGAA+AGG + chr3.3:71142966-71142985 None:intergenic 45.0%
TGCTATGCAGGTATCTTGGT+GGG - chr3.3:71142769-71142788 MS.gene75623:CDS 45.0%
TGTGCGACTATTTGACTGCA+GGG - chr3.3:71145717-71145736 MS.gene75623:CDS 45.0%
TTCACTCCATTCATGCAGGT+AGG - chr3.3:71144589-71144608 MS.gene75623:intron 45.0%
TTTGAGAGGCCACTTACAAG+TGG - chr3.3:71141871-71141890 MS.gene75623:CDS 45.0%
TTTGTGAGCGAACCGAAGAT+TGG - chr3.3:71144700-71144719 MS.gene75623:intron 45.0%
! ACCAGGAATGCTCTAAGTGT+GGG - chr3.3:71145966-71145985 MS.gene75623:CDS 45.0%
! AGGGTGGAGTATTAAGAGGA+TGG - chr3.3:71141951-71141970 MS.gene75623:CDS 45.0%
! ATTGTTGCTGGCATGGGTTT+TGG - chr3.3:71141198-71141217 MS.gene75623:CDS 45.0%
! TGTTTAGTGGGCCTCATGAA+TGG - chr3.3:71144667-71144686 MS.gene75623:intron 45.0%
! TTGTTGCTGGCATGGGTTTT+GGG - chr3.3:71141199-71141218 MS.gene75623:CDS 45.0%
!! CAATGGGTGTTGGGAACAAA+GGG - chr3.3:71145217-71145236 MS.gene75623:CDS 45.0%
!! CCATTAAACTCTGAGGTTGC+AGG + chr3.3:71144814-71144833 None:intergenic 45.0%
!! GTGGTGTTGCATATGCTGTA+AGG - chr3.3:71141890-71141909 MS.gene75623:CDS 45.0%
!! TAGGAGATGGTGGAAAGATG+TGG - chr3.3:71141074-71141093 MS.gene75623:CDS 45.0%
!!! GGGTTTTAACTGCCCCTTTT+AGG - chr3.3:71142240-71142259 MS.gene75623:CDS 45.0%
ACAAGGCAGTGGAAAAGCTC+TGG - chr3.3:71143828-71143847 MS.gene75623:intron 50.0%
ACCATTTCCAAGGTTGGCGA+CGG - chr3.3:71143356-71143375 MS.gene75623:intron 50.0%
ACGCGTAGCTTCAAACCTGT+TGG + chr3.3:71145852-71145871 None:intergenic 50.0%
AGTGGTTTCCCAGTTGCTGA+TGG - chr3.3:71144418-71144437 MS.gene75623:intron 50.0%
ATTCAGAGCCTTCAGTCACG+AGG - chr3.3:71144459-71144478 MS.gene75623:intron 50.0%
CCTCGAAACGGAGAACATCA+GGG - chr3.3:71145243-71145262 MS.gene75623:CDS 50.0%
CGAGCAAGAGAATCAGGCAA+AGG - chr3.3:71142218-71142237 MS.gene75623:CDS 50.0%
CGCGTAGCTTCAAACCTGTT+GGG + chr3.3:71145851-71145870 None:intergenic 50.0%
CTGCTATGCAGGTATCTTGG+TGG - chr3.3:71142768-71142787 MS.gene75623:CDS 50.0%
GAATCCTTCTGCCATTGACC+AGG - chr3.3:71141402-71141421 MS.gene75623:intron 50.0%
GATGAGATCATTGGAGGAGG+TGG + chr3.3:71144506-71144525 None:intergenic 50.0%
GATGGACCTACCTGCATGAA+TGG + chr3.3:71144598-71144617 None:intergenic 50.0%
GCATGTGTGATGAAAGGGCT+AGG - chr3.3:71141299-71141318 MS.gene75623:intron 50.0%
GCTATGCAGGTATCTTGGTG+GGG - chr3.3:71142770-71142789 MS.gene75623:CDS 50.0%
GGAGGAAATTGTTGCTGGCA+TGG - chr3.3:71141191-71141210 MS.gene75623:CDS 50.0%
GGGGATGGTTCCAATTCATC+TGG + chr3.3:71142018-71142037 None:intergenic 50.0%
GTCTGCGGTCATAGCCAAAA+TGG + chr3.3:71145930-71145949 None:intergenic 50.0%
GTGGACGAGAAAGAACCAAG+AGG + chr3.3:71144487-71144506 None:intergenic 50.0%
GTGTTGCGAGCAAGAGAATC+AGG - chr3.3:71142212-71142231 MS.gene75623:CDS 50.0%
GTTTGTCCACCGTAACCGAT+GGG - chr3.3:71144941-71144960 MS.gene75623:intron 50.0%
TCCATCTCGAGAAAACACGG+AGG - chr3.3:71144616-71144635 MS.gene75623:intron 50.0%
TCCTCGAAACGGAGAACATC+AGG - chr3.3:71145242-71145261 MS.gene75623:CDS 50.0%
TCGAGAAAACACGGAGGAAC+TGG - chr3.3:71144622-71144641 MS.gene75623:intron 50.0%
TCTCGACACTTCAGCACGAA+CGG + chr3.3:71144866-71144885 None:intergenic 50.0%
TCTCGTGCGAAACAGTAGCA+AGG + chr3.3:71143625-71143644 None:intergenic 50.0%
TTCAGAGCCTTCAGTCACGA+GGG - chr3.3:71144460-71144479 MS.gene75623:intron 50.0%
TTGGCGACGGGTACATCAAT+TGG - chr3.3:71143369-71143388 MS.gene75623:intron 50.0%
TTTGTCCACCGTAACCGATG+GGG - chr3.3:71144942-71144961 MS.gene75623:intron 50.0%
! AGATGCATCCCCATCGGTTA+CGG + chr3.3:71144953-71144972 None:intergenic 50.0%
! AGCTTTTCCACTGCCTTGTG+CGG + chr3.3:71143827-71143846 None:intergenic 50.0%
! CACCAGGAATGCTCTAAGTG+TGG - chr3.3:71145965-71145984 MS.gene75623:CDS 50.0%
! CCGTGTTTTCTCGAGATGGA+TGG + chr3.3:71144616-71144635 None:intergenic 50.0%
! GGAATGCTCTAAGTGTGGGA+TGG - chr3.3:71145970-71145989 MS.gene75623:CDS 50.0%
! GGTGTGGTTTGTGTAAGCAG+TGG - chr3.3:71145369-71145388 MS.gene75623:intron 50.0%
! TCCCACACTTAGAGCATTCC+TGG + chr3.3:71145970-71145989 None:intergenic 50.0%
! TCCTCCGTGTTTTCTCGAGA+TGG + chr3.3:71144620-71144639 None:intergenic 50.0%
! TGCTCTAAGTGTGGGATGGA+TGG - chr3.3:71145974-71145993 MS.gene75623:CDS 50.0%
!! AACTCTGAGGTTGCAGGATG+AGG + chr3.3:71144808-71144827 None:intergenic 50.0%
!! GCAATGGGTGTTGGGAACAA+AGG - chr3.3:71145216-71145235 MS.gene75623:CDS 50.0%
!!! TACACTATTTTGGGGTCGCG+TGG - chr3.3:71143250-71143269 MS.gene75623:CDS 50.0%
!!! TATTTTGGGGTCGCGTGGTA+GGG - chr3.3:71143255-71143274 MS.gene75623:CDS 50.0%
AAGAGGTCCCTCGTGACTGA+AGG + chr3.3:71144470-71144489 None:intergenic 55.0%
ACTTCAGCACGAACGGGTCT+CGG + chr3.3:71144859-71144878 None:intergenic 55.0%
ATGAACCGGGTTCTGCTCCA+TGG + chr3.3:71141980-71141999 None:intergenic 55.0%
CCATTTCCAAGGTTGGCGAC+GGG - chr3.3:71143357-71143376 MS.gene75623:intron 55.0%
CCCTGATGTTCTCCGTTTCG+AGG + chr3.3:71145246-71145265 None:intergenic 55.0%
CTCGACACTTCAGCACGAAC+GGG + chr3.3:71144865-71144884 None:intergenic 55.0%
CTCTGAATCCTTCCCAGCTG+CGG + chr3.3:71144447-71144466 None:intergenic 55.0%
CTGAGGTTGCAGGATGAGGT+TGG + chr3.3:71144804-71144823 None:intergenic 55.0%
GGATACCATGGAGCAGAACC+CGG - chr3.3:71141972-71141991 MS.gene75623:CDS 55.0%
GGTACCTGGTCAATGGCAGA+AGG + chr3.3:71141409-71141428 None:intergenic 55.0%
GGTTTGTCCACCGTAACCGA+TGG - chr3.3:71144940-71144959 MS.gene75623:intron 55.0%
GTCGCCAACCTTGGAAATGG+TGG + chr3.3:71143357-71143376 None:intergenic 55.0%
TATGACCGCAGACGTGATGC+AGG - chr3.3:71145937-71145956 MS.gene75623:CDS 55.0%
TCGGTAGAGGATACAGGCGA+TGG - chr3.3:71144538-71144557 MS.gene75623:intron 55.0%
TGTAGCCTGCATCACGTCTG+CGG + chr3.3:71145945-71145964 None:intergenic 55.0%
TTCAGTCACGAGGGACCTCT+TGG - chr3.3:71144469-71144488 MS.gene75623:intron 55.0%
! ATCATCGGCTGCGACTCTAG+AGG + chr3.3:71144568-71144587 None:intergenic 55.0%
! GGAAGCATGAGATGCACTGC+AGG - chr3.3:71142970-71142989 MS.gene75623:CDS 55.0%
!!! CTATTTTGGGGTCGCGTGGT+AGG - chr3.3:71143254-71143273 MS.gene75623:CDS 55.0%
!!! TGCTGGCATGGGTTTTGGGT+TGG - chr3.3:71141203-71141222 MS.gene75623:CDS 55.0%
CCCGTCGCCAACCTTGGAAA+TGG + chr3.3:71143360-71143379 None:intergenic 60.0%
CGTGATGCAGGCTACACACC+AGG - chr3.3:71145949-71145968 MS.gene75623:CDS 60.0%
GATGTACCCGTCGCCAACCT+TGG + chr3.3:71143366-71143385 None:intergenic 60.0%
GGAGCAGAACCCGGTTCATG+AGG - chr3.3:71141981-71142000 MS.gene75623:CDS 60.0%
GGGTGGCCTCAGCATAGTGA+TGG + chr3.3:71145403-71145422 None:intergenic 60.0%
GTCAGAACCGCACAAGGCAG+TGG - chr3.3:71143817-71143836 MS.gene75623:intron 60.0%
GTGAATCGCACGGTAGCAGC+TGG - chr3.3:71145324-71145343 MS.gene75623:intron 60.0%
TGCGGCGACCATCAGCAACT+GGG + chr3.3:71144429-71144448 None:intergenic 60.0%
! TGCATCCCCATCGGTTACGG+TGG + chr3.3:71144950-71144969 None:intergenic 60.0%
CTGCGGCGACCATCAGCAAC+TGG + chr3.3:71144430-71144449 None:intergenic 65.0%
TGCTGATGGTCGCCGCAGCT+GGG - chr3.3:71144432-71144451 MS.gene75623:intron 65.0%
TTGCTGATGGTCGCCGCAGC+TGG - chr3.3:71144431-71144450 MS.gene75623:intron 65.0%
GATGGTCGCCGCAGCTGGGA+AGG - chr3.3:71144436-71144455 MS.gene75623:intron 70.0%


Chromosome Type Strat End Strand Name
chr3.3 gene 71141052 71146066 71141052 ID=MS.gene75623
chr3.3 mRNA 71141052 71146066 71141052 ID=MS.gene75623.t1;Parent=MS.gene75623
chr3.3 exon 71145695 71146066 71145695 ID=MS.gene75623.t1.exon1;Parent=MS.gene75623.t1
chr3.3 CDS 71145695 71146066 71145695 ID=cds.MS.gene75623.t1;Parent=MS.gene75623.t1
chr3.3 exon 71144999 71145280 71144999 ID=MS.gene75623.t1.exon2;Parent=MS.gene75623.t1
chr3.3 CDS 71144999 71145280 71144999 ID=cds.MS.gene75623.t1;Parent=MS.gene75623.t1
chr3.3 exon 71144752 71144921 71144752 ID=MS.gene75623.t1.exon3;Parent=MS.gene75623.t1
chr3.3 CDS 71144752 71144921 71144752 ID=cds.MS.gene75623.t1;Parent=MS.gene75623.t1
chr3.3 exon 71144127 71144339 71144127 ID=MS.gene75623.t1.exon4;Parent=MS.gene75623.t1
chr3.3 CDS 71144127 71144339 71144127 ID=cds.MS.gene75623.t1;Parent=MS.gene75623.t1
chr3.3 exon 71143591 71143777 71143591 ID=MS.gene75623.t1.exon5;Parent=MS.gene75623.t1
chr3.3 CDS 71143591 71143777 71143591 ID=cds.MS.gene75623.t1;Parent=MS.gene75623.t1
chr3.3 exon 71143447 71143498 71143447 ID=MS.gene75623.t1.exon6;Parent=MS.gene75623.t1
chr3.3 CDS 71143447 71143498 71143447 ID=cds.MS.gene75623.t1;Parent=MS.gene75623.t1
chr3.3 exon 71143125 71143354 71143125 ID=MS.gene75623.t1.exon7;Parent=MS.gene75623.t1
chr3.3 CDS 71143125 71143354 71143125 ID=cds.MS.gene75623.t1;Parent=MS.gene75623.t1
chr3.3 exon 71142912 71143010 71142912 ID=MS.gene75623.t1.exon8;Parent=MS.gene75623.t1
chr3.3 CDS 71142912 71143010 71142912 ID=cds.MS.gene75623.t1;Parent=MS.gene75623.t1
chr3.3 exon 71141646 71142808 71141646 ID=MS.gene75623.t1.exon9;Parent=MS.gene75623.t1
chr3.3 CDS 71141646 71142808 71141646 ID=cds.MS.gene75623.t1;Parent=MS.gene75623.t1
chr3.3 exon 71141052 71141262 71141052 ID=MS.gene75623.t1.exon10;Parent=MS.gene75623.t1
chr3.3 CDS 71141052 71141262 71141052 ID=cds.MS.gene75623.t1;Parent=MS.gene75623.t1
Gene Sequence

>MS.gene75623

ATGGACACAAAGATGGGATTTTTAGGAGATGGTGGAAAGATGTGGCTTAAATGTTGGGAGAAGATCTTGGGAAGTACATGTAAAATCCATCAACAGTATTATCAGTGTATTGGTTCTAAAAGAGTTAGGAGAAAATTGTGGAGGAAATTGTTGCTGGCATGGGTTTTGGGTTGGTTTATAGTGTCTCTATGGATCTTTTGTGGTATTAACTTACACAACACTGAAAAGAGGAAAGAGACTTTAGCTAGCATGTGTGATGAAAGGGCTAGGATGTTACAAGATCAGTTTAATGTTAGTATGAATCATATTCAAGCCATGTCTATTCTGATCTCAACTTTCCATCATGCTAAGAATCCTTCTGCCATTGACCAGGTACCTAATCTTACTACTCACTGTCTTGCAATTAAGGATCTAATTCATTCGTGTGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTCTTAACCCTCCTGATAATTGAGTCAGGAGGTAAGTAAAGTATGGACAAATATTGTTTAAGTCAGGATTCAAACTCGAGTTTTCCTGAACAATTCGTCTTTAGCATGAGTTCATTAGCCTGTTGAGCCAAATCACTTAGTTTTTCAATTATGTACTATGTAGTAGCTTTATCTTTTCCTTCTGATTTTCAAGTTTTAAGTCTTCATTTTCATCTGAATTTATGTTTTTGAATAGAAATGAAGTAAATGTATATTTTATCTATGAAGCTGATATCAGTAGTGTGATGTTAACAAATGAACATAACAAGTTGTAAAACATGCAGAAAACTTTTGCAAAGTATACAGAAAGAACTGCTTTTGAGAGGCCACTTACAAGTGGTGTTGCATATGCTGTAAGGGTGCTTCAATCTGAAAGGGAACAATTTGAGAAGCAACAAGGGTGGAGTATTAAGAGGATGGATACCATGGAGCAGAACCCGGTTCATGAGGATGATTATGTACCAGATGAATTGGAACCATCCCCTATCCATGAAGAATATGCTCCTGTCATCTTTGCACAAGATACAATTTCACATGTCATATCTATTGATGTGCTTTCTGGAAAGGTAAGTTTCTTGTGAGATTATATGTGGAGTTATGGTTTGTACTTTGTAGTCGCTGTTCTTAACTTGTTCATATACAGGAAGACCGTGAAAATGTGTTGCGAGCAAGAGAATCAGGCAAAGGGGTTTTAACTGCCCCTTTTAGGCTGTTGAAAACAAACCGTTTAGGAGTTATCCTCACATTTGCTGTTTACAAGAGAGATCTTCCATCAAATGCTACCCCAAATGAAAGGATTCAAGCAACTGATGGGTGTGTATATGTTTTGGAATTTGTCAAGGGCCTATTTAGATTCACTTATTTGAGCATAAGAACTTGTAAGATTGATTGTGAGAGCTTATGCAAACAATTATGACTTGACCATAAGTTGTTTTCAGCTTATTTCCATAAGCTTATCTTGGGTAGCTTATGAAAACAGCTTAAAGCATATATGAAAATAGTTTGACTTTATTTTATCTTTTGGTATAGAAATAGCTTATAAATAAACACTTATATGATAAGTGTTTGCGCTTTAGGCGCTTAATTAACTTGTTTATCCAAACTTGGCCTAAATCAGAATTAGCTAACTTCAAGTTCTGAAGTAAATGATTTAGTGAGCAACTTTATTCGATTTGGCGTAAACAATTCATGAACATGGTTAATGTTTTAACTAACTGCTATGCAGGTATCTTGGTGGGGTGTTTGAAATAGAGTCATTAGTGGAGAAATTGCTTCAGCAACTTGCTAGCAAGCAAACCGTGCTTGTTAATGTGTATGATACAACAAATCAGACACACCCAATTCCCATGTATGGTTCTGATGTATCAGGTGACGAGTTCTATCATGTGAGCTTTCTTAACTTTGGAGATCCTTTCAGGAAGCATGAGATGCACTGCAGGTAAGAAAAATGCAGCAGAAAGCTCTTTTTTTCCAAATAAGTTTCTGTCCTTATGATGAATTAACTTTGAAATAATGGAAATCCGTACTTAGAAATCAAATTTTAAGCTGATCTTTTGCAGAGACTTCTATCATAACGAATAGAGTATATCTGCAAAGTTCTGCATACTCTGTTACAATAGGATAATGATGCTATCTCACATTAAGTACAAGATATGTTATCTAAAAACTTGATATATTAGCCTTATAAAACTTGTGATACACTATTTTGGGGTCGCGTGGTAGGGATTGTTTACTAATTTTTACATTGATTAAACTGTTATGATATTTTAAGGTTGATGCTGACACAGGTTCAAACAGAAACCACCATTTCCAAGGTTGGCGACGGGTACATCAATTGGCATCCTTGTTATTGCACTCCTTGTTGGACATATTTGTCATGCAACTGTGAGTCGAATTGCCAAAGTAGAGGATGATTACCAAGAGATGATGGTGCTTAAAAAACGAGCTGAAGCAGCTGATGTTGCTAAATCCCAGGTCTGCAATTTTTGTTGTCGCTATTAAATTTTTATTTATTTAGGCTCAAGTTACACCAATGATATGAGCTGAATCAATTGTCAACATTGCAGTTCCTTGCTACTGTTTCGCACGAGATCAGAACTCCAATGAACGGTGTTTTAGGTTAGTTGAAAACTCACTCTCTGTATACATAATATCCCGAGTATATCTATGGTTTCTTCATCCATGACCATGCTCTTAAATTGGATTTTCAGGGATGATGAATATGCTCATGGACACTGATCTAGATGTAACCCAACAAGAATATGTCAGAACCGCACAAGGCAGTGGAAAAGCTCTGGTGTCAATTATAAATGAAGTTTTGGACCAGGCAAAGATTGAATCTGGTAAGATAGAGCTCGAGGCTGTGCTGTTCGATATACGAGCAATTATGGACGATGTGTTATCGCTATTTTCTGAGAAATCTCAAGGAAAAGGAGTAGAGGTAATAATATATCTGTCTATTCTTCTGATGCACTTCTACCACCATGTTGAAATTTTCAGAATCATAACTTAACAGGCTTTACGTGTTTGGTTTTATTCTTTTTTGGGAGCAAAGTTAGCAGTTTATGTCTCGGATCAGGTTCCTCAACAGCTTATAGGTGATCCTGGAAGGTTTCGACAAATAATTACAAATCTCATGGGTAACTCGATTAAGGTAAAATACCATTGAGTCCTATCAAACCTCTTTAAACTCGTTCCTTTTGTGGACTAATTTACAAGTCAAAATATGAAAACTAAAATATGCAATTGTTTGGCAGTTCACAGACAAAGGACATATCTTTGTGACTATCCATCTTGTTGAGGAGGTTTTCCATTCAATAGAAGTTGAGAGAGAATCTACTTCAAAAGATGCAGAACATACATTAAGTGGTTTCCCAGTTGCTGATGGTCGCCGCAGCTGGGAAGGATTCAGAGCCTTCAGTCACGAGGGACCTCTTGGTTCTTTCTCGTCCACCTCCTCCAATGATCTCATCAGTTTGATTGTATCGGTAGAGGATACAGGCGATGGTATTCCTCTAGAGTCGCAGCCGATGATATTCACTCCATTCATGCAGGTAGGTCCATCCATCTCGAGAAAACACGGAGGAACTGGTATTGGTCTAAGCATTAGCAAGTGTTTAGTGGGCCTCATGAATGGAGAAATCGGATTTGTGAGCGAACCGAAGATTGGAAGCACTTTCACATTTACAGCTGTGTTCACCAATGCATGTCCTAATTCAAATGAGCTTCAAACTCAACAAATCAATAACCAACCTCATCCTGCAACCTCAGAGTTTAATGGTATGGCTGCACTAGTTATTGATCCGAGACCCGTTCGTGCTGAAGTGTCGAGATATCACATACAAAGGCTTGGCGTTCGTGTTGAAATAGTTTCAGATTTGAAGCAAGGTTTGTCCACCGTAACCGATGGGGATGCATCTATCAATATGGTCCTGATTGAACAAGAGGTTTGGGAAAGAGACTCGAGTATTTCATCGCACTTTGTGAATAACATTAGGAAAGTTGTTGAAGTTGATAAAGGAAAAGAGATTCCTCCAAAACTATTTATTCTCGTTAATTCTAGTAGTTCTTTTAGAGCGAGTTCTACGGCATCATGTCTTCATAATCCAACAGTTGTCACAAAACCTTTGAGAGCAAGTATGCTTGCGGCTTCACTACAAAGAGCAATGGGTGTTGGGAACAAAGGGAATCCTCGAAACGGAGAACATCAGGGTTTGTCTCTCAAGCATCTTCTCTCTGGGAGAAAGATTCTTATTGTAGATGATAATAGTGTGAATCGCACGGTAGCAGCTGGTGCTTTGAAAAAATATGGAGCTGGTGTGGTTTGTGTAAGCAGTGGAATAGAAGCCATCACTATGCTGAGGCCACCCCATCAATTTGATGCATGTTTCATGGATATTCAAATGCCTGAAATGGATGGGTATGCATTAGATTCTTTCTTCTATAATCTTGATAATTATCTTTTGAACTTAAATTCTAAATTTCATTGAAAACTCTTTCTAGGATGAAAATGGATTGCCTGCAGTCACAGATTCAAGTTTTTGTGAATATGAACGGTTCGATCTTGATTGGACGATTCACATTCTAACTTCCTGTTTTTGACCTATTTTGTGAAGTTAGAATACAATTTGTCTAATTGAAGATCAAACGTCCCATGTGAATGATGTGCGACTATTTGACTGCAGGGAATCCAATTGCAAAACTTAGCACACTTTTTGAATTACATTGAAAACAATCAATGCACACAATAACACATATCATTCTATATTAGCACATAGTTAGCTAATAACCATTTCCCAACAGGTTTGAAGCTACGCGTCGAATTCGAGAGATCGAAAACAATGTGAAAGACAGAGAACTGTTTGTTCATCTACCCATTTTGGCTATGACCGCAGACGTGATGCAGGCTACACACCAGGAATGCTCTAAGTGTGGGATGGATGGATATGTTTCAAAACCATTTGAAGCTGAACAACTTTATAGAGAGGTTTCAAAGTTTTTCCAATCATCTTGA
Protein sequence

>MS.gene75623.t1

MDTKMGFLGDGGKMWLKCWEKILGSTCKIHQQYYQCIGSKRVRRKLWRKLLLAWVLGWFIVSLWIFCGINLHNTEKRKETLASMCDERARMLQDQFNVSMNHIQAMSILISTFHHAKNPSAIDQKTFAKYTERTAFERPLTSGVAYAVRVLQSEREQFEKQQGWSIKRMDTMEQNPVHEDDYVPDELEPSPIHEEYAPVIFAQDTISHVISIDVLSGKEDRENVLRARESGKGVLTAPFRLLKTNRLGVILTFAVYKRDLPSNATPNERIQATDGYLGGVFEIESLVEKLLQQLASKQTVLVNVYDTTNQTHPIPMYGSDVSGDEFYHVSFLNFGDPFRKHEMHCRFKQKPPFPRLATGTSIGILVIALLVGHICHATVSRIAKVEDDYQEMMVLKKRAEAADVAKSQFLATVSHEIRTPMNGVLGMMNMLMDTDLDVTQQEYVRTAQGSGKALVSIINEVLDQAKIESGKIELEAVLFDIRAIMDDVLSLFSEKSQGKGVELAVYVSDQVPQQLIGDPGRFRQIITNLMGNSIKFTDKGHIFVTIHLVEEVFHSIEVERESTSKDAEHTLSGFPVADGRRSWEGFRAFSHEGPLGSFSSTSSNDLISLIVSVEDTGDGIPLESQPMIFTPFMQVGPSISRKHGGTGIGLSISKCLVGLMNGEIGFVSEPKIGSTFTFTAVFTNACPNSNELQTQQINNQPHPATSEFNGMAALVIDPRPVRAEVSRYHIQRLGVRVEIVSDLKQGLSTVTDGDASINMVLIEQEVWERDSSISSHFVNNIRKVVEVDKGKEIPPKLFILVNSSSSFRASSTASCLHNPTVVTKPLRASMLAASLQRAMGVGNKGNPRNGEHQGLSLKHLLSGRKILIVDDNSVNRTVAAGALKKYGAGVVCVSSGIEAITMLRPPHQFDACFMDIQMPEMDGFEATRRIREIENNVKDRELFVHLPILAMTADVMQATHQECSKCGMDGYVSKPFEAEQLYREVSKFFQSS