Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene77519.t1 | XP_003601657.1 | 96.7 | 120 | 4 | 0 | 1 | 120 | 1 | 120 | 3.30E-57 | 231.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene77519.t1 | Q9LIS2 | 62.4 | 117 | 42 | 2 | 1 | 116 | 1 | 116 | 9.9e-34 | 144.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene77519.t1 | G7JA80 | 96.7 | 120 | 4 | 0 | 1 | 120 | 1 | 120 | 2.4e-57 | 231.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene05548 | MS.gene77519 | 0.805002 | 1.65E-49 | -1.69E-46 |
MS.gene055555 | MS.gene77519 | 0.82352 | 1.33E-53 | -1.69E-46 |
MS.gene055808 | MS.gene77519 | 0.804301 | 2.31E-49 | -1.69E-46 |
MS.gene057705 | MS.gene77519 | 0.817433 | 3.31E-52 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene77519 | MS.gene87189 | PPI |
MS.gene88428 | MS.gene77519 | PPI |
MS.gene77519 | MS.gene016534 | PPI |
MS.gene063816 | MS.gene77519 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene77519.t1 | MTR_3g084040 | 96.552 | 116 | 4 | 0 | 1 | 116 | 1 | 116 | 1.07e-79 | 232 |
MS.gene77519.t1 | MTR_3g084040 | 95.960 | 99 | 4 | 0 | 1 | 99 | 1 | 99 | 9.69e-67 | 198 |
MS.gene77519.t1 | MTR_4g109540 | 54.545 | 121 | 48 | 3 | 1 | 114 | 1 | 121 | 5.10e-38 | 130 |
MS.gene77519.t1 | MTR_4g109540 | 51.163 | 129 | 48 | 4 | 1 | 114 | 1 | 129 | 3.25e-35 | 123 |
MS.gene77519.t1 | MTR_7g013730 | 48.780 | 123 | 58 | 2 | 1 | 118 | 1 | 123 | 7.54e-35 | 122 |
MS.gene77519.t1 | MTR_7g013740 | 47.656 | 128 | 54 | 4 | 1 | 121 | 1 | 122 | 6.11e-34 | 116 |
MS.gene77519.t1 | MTR_3g025880 | 45.968 | 124 | 58 | 3 | 1 | 115 | 1 | 124 | 1.96e-31 | 116 |
MS.gene77519.t1 | MTR_3g014000 | 43.066 | 137 | 58 | 5 | 1 | 129 | 1 | 125 | 8.95e-27 | 97.8 |
MS.gene77519.t1 | MTR_3g080130 | 47.368 | 95 | 49 | 1 | 36 | 129 | 36 | 130 | 1.29e-26 | 97.4 |
MS.gene77519.t1 | MTR_7g105260 | 45.714 | 105 | 53 | 2 | 23 | 123 | 19 | 123 | 1.26e-24 | 92.4 |
MS.gene77519.t1 | MTR_4g070080 | 52.632 | 76 | 35 | 1 | 37 | 111 | 7 | 82 | 5.29e-24 | 90.5 |
MS.gene77519.t1 | MTR_4g070080 | 52.632 | 76 | 35 | 1 | 37 | 111 | 7 | 82 | 1.27e-23 | 90.5 |
MS.gene77519.t1 | MTR_4g063560 | 43.000 | 100 | 56 | 1 | 15 | 113 | 12 | 111 | 1.84e-23 | 88.6 |
MS.gene77519.t1 | MTR_4g070190 | 50.000 | 76 | 37 | 1 | 37 | 111 | 9 | 84 | 2.13e-22 | 87.4 |
MS.gene77519.t1 | MTR_4g070140 | 51.316 | 76 | 36 | 1 | 37 | 111 | 9 | 84 | 6.74e-22 | 87.0 |
MS.gene77519.t1 | MTR_3g075500 | 45.783 | 83 | 44 | 1 | 37 | 118 | 207 | 289 | 1.21e-19 | 82.8 |
MS.gene77519.t1 | MTR_7g099940 | 40.496 | 121 | 62 | 4 | 1 | 116 | 1 | 116 | 5.05e-19 | 78.2 |
MS.gene77519.t1 | MTR_1g064230 | 50.000 | 80 | 39 | 1 | 37 | 115 | 197 | 276 | 1.94e-18 | 79.7 |
MS.gene77519.t1 | MTR_4g081520 | 43.956 | 91 | 48 | 2 | 31 | 118 | 44 | 134 | 1.37e-17 | 74.7 |
MS.gene77519.t1 | MTR_1g092860 | 37.895 | 95 | 55 | 2 | 33 | 126 | 189 | 280 | 3.63e-17 | 76.3 |
MS.gene77519.t1 | MTR_4g104470 | 45.570 | 79 | 42 | 1 | 37 | 114 | 217 | 295 | 6.65e-17 | 75.5 |
MS.gene77519.t1 | MTR_4g104470 | 44.706 | 85 | 44 | 2 | 37 | 120 | 123 | 205 | 5.88e-12 | 62.0 |
MS.gene77519.t1 | MTR_3g055990 | 45.570 | 79 | 42 | 1 | 37 | 115 | 7 | 84 | 8.83e-17 | 76.3 |
MS.gene77519.t1 | MTR_3g055990 | 45.570 | 79 | 42 | 1 | 37 | 115 | 7 | 84 | 9.06e-17 | 76.3 |
MS.gene77519.t1 | MTR_4g074930 | 40.196 | 102 | 60 | 1 | 30 | 131 | 358 | 458 | 2.32e-16 | 75.1 |
MS.gene77519.t1 | MTR_4g074930 | 40.196 | 102 | 60 | 1 | 30 | 131 | 370 | 470 | 2.44e-16 | 75.1 |
MS.gene77519.t1 | MTR_4g074930 | 40.196 | 102 | 60 | 1 | 30 | 131 | 323 | 423 | 3.01e-16 | 74.7 |
MS.gene77519.t1 | MTR_4g074930 | 40.196 | 102 | 60 | 1 | 30 | 131 | 335 | 435 | 3.02e-16 | 74.7 |
MS.gene77519.t1 | MTR_6g004810 | 35.455 | 110 | 65 | 2 | 31 | 134 | 128 | 237 | 1.91e-15 | 72.4 |
MS.gene77519.t1 | MTR_1g073690 | 36.471 | 85 | 54 | 0 | 32 | 116 | 108 | 192 | 4.13e-15 | 71.6 |
MS.gene77519.t1 | MTR_1g073690 | 37.975 | 79 | 48 | 1 | 37 | 115 | 7 | 84 | 1.36e-12 | 64.3 |
MS.gene77519.t1 | MTR_1g045510 | 46.753 | 77 | 40 | 1 | 37 | 112 | 205 | 281 | 4.21e-15 | 70.5 |
MS.gene77519.t1 | MTR_1g045510 | 35.294 | 85 | 54 | 1 | 36 | 119 | 113 | 197 | 4.76e-12 | 62.0 |
MS.gene77519.t1 | MTR_3g116130 | 37.079 | 89 | 55 | 1 | 36 | 123 | 29 | 117 | 6.54e-15 | 70.1 |
MS.gene77519.t1 | MTR_3g065190 | 43.678 | 87 | 47 | 2 | 36 | 120 | 112 | 198 | 6.58e-15 | 70.9 |
MS.gene77519.t1 | MTR_7g107580 | 40.964 | 83 | 48 | 1 | 38 | 119 | 350 | 432 | 8.57e-15 | 70.5 |
MS.gene77519.t1 | MTR_7g107580 | 40.964 | 83 | 48 | 1 | 38 | 119 | 351 | 433 | 8.58e-15 | 70.5 |
MS.gene77519.t1 | MTR_3g116130 | 37.079 | 89 | 55 | 1 | 36 | 123 | 29 | 117 | 1.12e-14 | 70.1 |
MS.gene77519.t1 | MTR_5g097580 | 41.250 | 80 | 46 | 1 | 35 | 114 | 5 | 83 | 1.29e-14 | 70.1 |
MS.gene77519.t1 | MTR_5g097580 | 34.177 | 79 | 52 | 0 | 37 | 115 | 107 | 185 | 1.41e-11 | 61.2 |
MS.gene77519.t1 | MTR_5g097580 | 41.250 | 80 | 46 | 1 | 35 | 114 | 5 | 83 | 1.39e-14 | 70.1 |
MS.gene77519.t1 | MTR_5g097580 | 34.177 | 79 | 52 | 0 | 37 | 115 | 107 | 185 | 1.42e-11 | 61.2 |
MS.gene77519.t1 | MTR_4g035310 | 37.113 | 97 | 58 | 1 | 36 | 132 | 16 | 109 | 1.53e-14 | 68.9 |
MS.gene77519.t1 | MTR_4g035310 | 37.113 | 97 | 58 | 1 | 36 | 132 | 16 | 109 | 1.54e-14 | 68.9 |
MS.gene77519.t1 | MTR_3g029580 | 36.170 | 94 | 56 | 3 | 18 | 108 | 13 | 105 | 2.74e-14 | 65.9 |
MS.gene77519.t1 | MTR_3g103420 | 36.905 | 84 | 53 | 0 | 32 | 115 | 113 | 196 | 3.61e-14 | 68.6 |
MS.gene77519.t1 | MTR_3g103420 | 37.500 | 96 | 53 | 2 | 27 | 122 | 1 | 89 | 5.38e-12 | 62.4 |
MS.gene77519.t1 | MTR_1g097280 | 34.409 | 93 | 60 | 1 | 38 | 129 | 31 | 123 | 3.85e-14 | 68.6 |
MS.gene77519.t1 | MTR_8g024520 | 42.029 | 69 | 40 | 0 | 36 | 104 | 25 | 93 | 4.10e-14 | 67.8 |
MS.gene77519.t1 | MTR_8g024520 | 42.029 | 69 | 40 | 0 | 36 | 104 | 25 | 93 | 4.17e-14 | 67.8 |
MS.gene77519.t1 | MTR_7g117495 | 40.580 | 69 | 41 | 0 | 36 | 104 | 18 | 86 | 4.23e-14 | 67.4 |
MS.gene77519.t1 | MTR_2g096560 | 38.750 | 80 | 48 | 1 | 36 | 114 | 7 | 86 | 4.42e-14 | 63.9 |
MS.gene77519.t1 | MTR_7g117495 | 40.580 | 69 | 41 | 0 | 36 | 104 | 18 | 86 | 4.74e-14 | 67.4 |
MS.gene77519.t1 | MTR_6g477870 | 34.091 | 88 | 51 | 2 | 36 | 122 | 95 | 176 | 5.13e-14 | 66.2 |
MS.gene77519.t1 | MTR_2g026180 | 40.244 | 82 | 48 | 1 | 33 | 114 | 1 | 81 | 5.95e-14 | 68.2 |
MS.gene77519.t1 | MTR_2g026180 | 31.868 | 91 | 62 | 0 | 33 | 123 | 103 | 193 | 6.48e-12 | 62.4 |
MS.gene77519.t1 | MTR_8g022050 | 45.333 | 75 | 40 | 1 | 38 | 111 | 149 | 223 | 9.80e-14 | 67.4 |
MS.gene77519.t1 | MTR_4g124940 | 44.000 | 75 | 41 | 1 | 38 | 111 | 133 | 207 | 2.37e-13 | 66.2 |
MS.gene77519.t1 | MTR_3g092490 | 42.029 | 69 | 40 | 0 | 36 | 104 | 26 | 94 | 3.31e-13 | 63.9 |
MS.gene77519.t1 | MTR_4g117350 | 38.272 | 81 | 49 | 1 | 34 | 113 | 69 | 149 | 5.50e-13 | 62.8 |
MS.gene77519.t1 | MTR_1g019150 | 36.000 | 100 | 58 | 2 | 19 | 112 | 10 | 109 | 5.69e-13 | 65.5 |
MS.gene77519.t1 | MTR_3g092490 | 42.029 | 69 | 40 | 0 | 36 | 104 | 26 | 94 | 5.75e-13 | 64.3 |
MS.gene77519.t1 | MTR_3g092490 | 42.029 | 69 | 40 | 0 | 36 | 104 | 26 | 94 | 5.93e-13 | 64.3 |
MS.gene77519.t1 | MTR_5g064120 | 37.681 | 69 | 43 | 0 | 36 | 104 | 16 | 84 | 6.49e-13 | 64.7 |
MS.gene77519.t1 | MTR_1g036430 | 39.796 | 98 | 57 | 2 | 35 | 131 | 161 | 257 | 8.82e-13 | 64.7 |
MS.gene77519.t1 | MTR_7g106440 | 39.080 | 87 | 52 | 1 | 34 | 119 | 210 | 296 | 1.08e-12 | 64.3 |
MS.gene77519.t1 | MTR_3g075500 | 42.188 | 64 | 36 | 1 | 37 | 99 | 207 | 270 | 1.49e-12 | 63.5 |
MS.gene77519.t1 | MTR_3g109090 | 41.860 | 86 | 48 | 2 | 38 | 122 | 131 | 215 | 2.02e-12 | 63.5 |
MS.gene77519.t1 | MTR_3g109090 | 41.860 | 86 | 48 | 2 | 38 | 122 | 147 | 231 | 2.09e-12 | 63.5 |
MS.gene77519.t1 | MTR_4g081510 | 33.913 | 115 | 66 | 4 | 3 | 114 | 16 | 123 | 2.21e-12 | 62.0 |
MS.gene77519.t1 | MTR_8g463890 | 43.056 | 72 | 41 | 0 | 33 | 104 | 70 | 141 | 3.23e-12 | 63.2 |
MS.gene77519.t1 | MTR_3g029580 | 35.802 | 81 | 48 | 3 | 22 | 99 | 17 | 96 | 3.32e-12 | 60.5 |
MS.gene77519.t1 | MTR_5g044970 | 36.250 | 80 | 50 | 1 | 33 | 111 | 7 | 86 | 4.07e-12 | 60.8 |
MS.gene77519.t1 | MTR_2g026180 | 34.177 | 79 | 52 | 0 | 33 | 111 | 33 | 111 | 5.30e-12 | 62.4 |
MS.gene77519.t1 | MTR_5g071540 | 29.703 | 101 | 59 | 2 | 9 | 108 | 23 | 112 | 1.16e-11 | 59.3 |
MS.gene77519.t1 | MTR_2g097960 | 40.964 | 83 | 47 | 2 | 38 | 118 | 110 | 192 | 1.57e-11 | 61.2 |
MS.gene77519.t1 | MTR_4g085540 | 37.975 | 79 | 48 | 1 | 35 | 112 | 33 | 111 | 1.98e-11 | 60.8 |
MS.gene77519.t1 | MTR_4g131970 | 34.906 | 106 | 65 | 3 | 31 | 132 | 160 | 265 | 2.07e-11 | 60.8 |
MS.gene77519.t1 | MTR_4g036415 | 39.024 | 82 | 49 | 1 | 31 | 111 | 446 | 527 | 3.37e-11 | 60.5 |
MS.gene77519.t1 | MTR_5g017280 | 37.349 | 83 | 51 | 1 | 33 | 115 | 1 | 82 | 8.14e-11 | 58.9 |
MS.gene77519.t1 | MTR_5g017280 | 37.349 | 83 | 51 | 1 | 33 | 115 | 1 | 82 | 9.30e-11 | 58.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene77519.t1 | AT3G23830 | 62.295 | 122 | 43 | 3 | 1 | 121 | 1 | 120 | 6.83e-48 | 151 |
MS.gene77519.t1 | AT3G23830 | 62.295 | 122 | 43 | 3 | 1 | 121 | 1 | 120 | 6.83e-48 | 151 |
MS.gene77519.t1 | AT4G13850 | 62.295 | 122 | 43 | 3 | 1 | 121 | 1 | 120 | 2.95e-46 | 147 |
MS.gene77519.t1 | AT4G13850 | 62.295 | 122 | 43 | 3 | 1 | 121 | 1 | 120 | 3.89e-46 | 147 |
MS.gene77519.t1 | AT4G13850 | 62.295 | 122 | 43 | 3 | 1 | 121 | 1 | 120 | 4.53e-46 | 147 |
MS.gene77519.t1 | AT5G61030 | 57.983 | 119 | 45 | 2 | 1 | 114 | 1 | 119 | 6.79e-42 | 141 |
MS.gene77519.t1 | AT5G61030 | 57.983 | 119 | 45 | 2 | 1 | 114 | 1 | 119 | 6.79e-42 | 141 |
MS.gene77519.t1 | AT4G13850 | 59.398 | 133 | 43 | 3 | 1 | 132 | 1 | 123 | 7.63e-42 | 135 |
MS.gene77519.t1 | AT1G74230 | 55.752 | 113 | 48 | 1 | 1 | 113 | 1 | 111 | 1.37e-38 | 132 |
MS.gene77519.t1 | AT5G47320 | 58.772 | 114 | 41 | 3 | 1 | 113 | 1 | 109 | 2.49e-35 | 122 |
MS.gene77519.t1 | AT3G08000 | 47.899 | 119 | 54 | 2 | 9 | 119 | 7 | 125 | 1.47e-28 | 102 |
MS.gene77519.t1 | AT5G06210 | 50.000 | 100 | 39 | 2 | 35 | 133 | 33 | 122 | 1.00e-23 | 90.5 |
MS.gene77519.t1 | AT2G21660 | 49.351 | 77 | 38 | 1 | 37 | 112 | 9 | 85 | 1.28e-21 | 85.5 |
MS.gene77519.t1 | AT2G21660 | 49.351 | 77 | 38 | 1 | 37 | 112 | 9 | 85 | 1.92e-21 | 85.5 |
MS.gene77519.t1 | AT5G59865 | 50.000 | 84 | 41 | 1 | 34 | 116 | 24 | 107 | 6.02e-21 | 82.4 |
MS.gene77519.t1 | AT2G37220 | 50.575 | 87 | 39 | 2 | 37 | 122 | 205 | 288 | 8.65e-21 | 85.9 |
MS.gene77519.t1 | AT2G37220 | 40.860 | 93 | 50 | 2 | 37 | 128 | 92 | 180 | 9.37e-13 | 64.3 |
MS.gene77519.t1 | AT3G53460 | 51.807 | 83 | 39 | 1 | 37 | 118 | 258 | 340 | 1.60e-20 | 85.9 |
MS.gene77519.t1 | AT3G53460 | 51.807 | 83 | 39 | 1 | 37 | 118 | 258 | 340 | 1.60e-20 | 85.9 |
MS.gene77519.t1 | AT3G53460 | 51.807 | 83 | 39 | 1 | 37 | 118 | 258 | 340 | 1.60e-20 | 85.9 |
MS.gene77519.t1 | AT3G53460 | 51.807 | 83 | 39 | 1 | 37 | 118 | 279 | 361 | 1.81e-20 | 86.3 |
MS.gene77519.t1 | AT4G39260 | 42.169 | 83 | 47 | 1 | 37 | 118 | 7 | 89 | 1.17e-19 | 78.6 |
MS.gene77519.t1 | AT1G18630 | 41.228 | 114 | 61 | 3 | 1 | 112 | 4 | 113 | 5.77e-19 | 78.6 |
MS.gene77519.t1 | AT3G26420 | 44.565 | 92 | 50 | 1 | 37 | 127 | 8 | 99 | 1.09e-18 | 79.7 |
MS.gene77519.t1 | AT4G24770 | 48.101 | 79 | 40 | 1 | 37 | 114 | 245 | 323 | 1.83e-18 | 80.1 |
MS.gene77519.t1 | AT4G24770 | 36.449 | 107 | 67 | 1 | 23 | 128 | 137 | 243 | 4.42e-12 | 62.4 |
MS.gene77519.t1 | AT4G24770 | 48.101 | 79 | 40 | 1 | 37 | 114 | 245 | 323 | 1.83e-18 | 80.1 |
MS.gene77519.t1 | AT4G24770 | 36.449 | 107 | 67 | 1 | 23 | 128 | 137 | 243 | 4.42e-12 | 62.4 |
MS.gene77519.t1 | AT5G50250 | 45.570 | 79 | 42 | 1 | 37 | 114 | 208 | 286 | 5.17e-18 | 78.6 |
MS.gene77519.t1 | AT5G50250 | 38.298 | 94 | 57 | 1 | 36 | 128 | 113 | 206 | 1.19e-11 | 61.2 |
MS.gene77519.t1 | AT2G37510 | 38.182 | 110 | 59 | 2 | 33 | 133 | 31 | 140 | 6.46e-18 | 75.5 |
MS.gene77519.t1 | AT3G46020 | 45.000 | 80 | 43 | 1 | 35 | 113 | 6 | 85 | 1.52e-17 | 73.2 |
MS.gene77519.t1 | AT4G39260 | 42.105 | 76 | 43 | 1 | 37 | 111 | 7 | 82 | 1.73e-17 | 73.9 |
MS.gene77519.t1 | AT4G39260 | 42.105 | 76 | 43 | 1 | 37 | 111 | 7 | 82 | 4.64e-17 | 73.9 |
MS.gene77519.t1 | AT4G13860 | 48.000 | 75 | 38 | 1 | 35 | 108 | 2 | 76 | 9.31e-17 | 70.9 |
MS.gene77519.t1 | AT1G60000 | 51.899 | 79 | 37 | 1 | 34 | 111 | 175 | 253 | 4.79e-16 | 72.8 |
MS.gene77519.t1 | AT3G20930 | 37.234 | 94 | 58 | 1 | 33 | 125 | 279 | 372 | 5.90e-16 | 73.6 |
MS.gene77519.t1 | AT5G55550 | 43.038 | 79 | 44 | 1 | 37 | 115 | 7 | 84 | 7.47e-16 | 73.6 |
MS.gene77519.t1 | AT5G55550 | 31.373 | 102 | 69 | 1 | 35 | 136 | 109 | 209 | 9.90e-12 | 61.6 |
MS.gene77519.t1 | AT5G55550 | 43.038 | 79 | 44 | 1 | 37 | 115 | 7 | 84 | 7.47e-16 | 73.6 |
MS.gene77519.t1 | AT5G55550 | 31.373 | 102 | 69 | 1 | 35 | 136 | 109 | 209 | 9.90e-12 | 61.6 |
MS.gene77519.t1 | AT5G55550 | 43.038 | 79 | 44 | 1 | 37 | 115 | 7 | 84 | 7.47e-16 | 73.6 |
MS.gene77519.t1 | AT5G55550 | 31.373 | 102 | 69 | 1 | 35 | 136 | 109 | 209 | 9.90e-12 | 61.6 |
MS.gene77519.t1 | AT5G55550 | 43.038 | 79 | 44 | 1 | 37 | 115 | 7 | 84 | 7.47e-16 | 73.6 |
MS.gene77519.t1 | AT5G55550 | 31.373 | 102 | 69 | 1 | 35 | 136 | 109 | 209 | 9.90e-12 | 61.6 |
MS.gene77519.t1 | AT5G55550 | 43.038 | 79 | 44 | 1 | 37 | 115 | 7 | 84 | 7.47e-16 | 73.6 |
MS.gene77519.t1 | AT5G55550 | 31.373 | 102 | 69 | 1 | 35 | 136 | 109 | 209 | 9.90e-12 | 61.6 |
MS.gene77519.t1 | AT5G55550 | 43.038 | 79 | 44 | 1 | 37 | 115 | 7 | 84 | 8.51e-16 | 73.6 |
MS.gene77519.t1 | AT5G55550 | 31.373 | 102 | 69 | 1 | 35 | 136 | 109 | 209 | 8.46e-12 | 62.0 |
MS.gene77519.t1 | AT5G55550 | 43.038 | 79 | 44 | 1 | 37 | 115 | 7 | 84 | 8.51e-16 | 73.6 |
MS.gene77519.t1 | AT5G55550 | 31.373 | 102 | 69 | 1 | 35 | 136 | 109 | 209 | 8.46e-12 | 62.0 |
MS.gene77519.t1 | AT5G55550 | 43.038 | 79 | 44 | 1 | 37 | 115 | 7 | 84 | 8.51e-16 | 73.6 |
MS.gene77519.t1 | AT5G55550 | 31.373 | 102 | 69 | 1 | 35 | 136 | 109 | 209 | 8.46e-12 | 62.0 |
MS.gene77519.t1 | AT5G55550 | 43.038 | 79 | 44 | 1 | 37 | 115 | 7 | 84 | 8.51e-16 | 73.6 |
MS.gene77519.t1 | AT5G55550 | 31.373 | 102 | 69 | 1 | 35 | 136 | 109 | 209 | 8.46e-12 | 62.0 |
MS.gene77519.t1 | AT1G76460 | 37.363 | 91 | 54 | 1 | 36 | 126 | 24 | 111 | 1.96e-15 | 71.6 |
MS.gene77519.t1 | AT5G55550 | 45.714 | 70 | 37 | 1 | 37 | 106 | 7 | 75 | 2.67e-15 | 72.0 |
MS.gene77519.t1 | AT5G55550 | 31.373 | 102 | 69 | 1 | 35 | 136 | 156 | 256 | 5.91e-12 | 62.4 |
MS.gene77519.t1 | AT5G55550 | 45.714 | 70 | 37 | 1 | 37 | 106 | 7 | 75 | 3.04e-15 | 72.0 |
MS.gene77519.t1 | AT5G55550 | 31.373 | 102 | 69 | 1 | 35 | 136 | 156 | 256 | 5.77e-12 | 62.4 |
MS.gene77519.t1 | AT5G54580 | 36.752 | 117 | 62 | 3 | 3 | 115 | 28 | 136 | 3.10e-15 | 68.9 |
MS.gene77519.t1 | AT1G22330 | 35.398 | 113 | 66 | 2 | 36 | 148 | 17 | 122 | 5.04e-15 | 70.5 |
MS.gene77519.t1 | AT1G22910 | 38.144 | 97 | 57 | 1 | 36 | 132 | 13 | 106 | 6.53e-15 | 69.7 |
MS.gene77519.t1 | AT3G07810 | 41.026 | 78 | 45 | 1 | 37 | 114 | 7 | 83 | 6.68e-15 | 70.9 |
MS.gene77519.t1 | AT3G07810 | 33.333 | 81 | 54 | 0 | 35 | 115 | 107 | 187 | 2.32e-11 | 60.8 |
MS.gene77519.t1 | AT3G07810 | 41.026 | 78 | 45 | 1 | 37 | 114 | 7 | 83 | 6.80e-15 | 70.9 |
MS.gene77519.t1 | AT3G07810 | 33.333 | 81 | 54 | 0 | 35 | 115 | 107 | 187 | 2.41e-11 | 60.8 |
MS.gene77519.t1 | AT1G22910 | 38.144 | 97 | 57 | 1 | 36 | 132 | 13 | 106 | 7.89e-15 | 69.3 |
MS.gene77519.t1 | AT3G52380 | 44.578 | 83 | 45 | 1 | 34 | 115 | 217 | 299 | 1.24e-14 | 69.7 |
MS.gene77519.t1 | AT4G26650 | 42.308 | 78 | 44 | 1 | 37 | 114 | 16 | 92 | 1.27e-14 | 70.1 |
MS.gene77519.t1 | AT4G26650 | 34.568 | 81 | 53 | 0 | 35 | 115 | 121 | 201 | 2.45e-12 | 63.5 |
MS.gene77519.t1 | AT4G26650 | 42.308 | 78 | 44 | 1 | 37 | 114 | 13 | 89 | 1.27e-14 | 70.1 |
MS.gene77519.t1 | AT4G26650 | 34.568 | 81 | 53 | 0 | 35 | 115 | 118 | 198 | 2.55e-12 | 63.5 |
MS.gene77519.t1 | AT1G22910 | 38.144 | 97 | 57 | 1 | 36 | 132 | 13 | 106 | 1.47e-14 | 69.7 |
MS.gene77519.t1 | AT1G33470 | 42.029 | 69 | 40 | 0 | 36 | 104 | 7 | 75 | 1.51e-14 | 68.6 |
MS.gene77519.t1 | AT1G33470 | 42.029 | 69 | 40 | 0 | 36 | 104 | 7 | 75 | 1.54e-14 | 68.6 |
MS.gene77519.t1 | AT1G33470 | 42.029 | 69 | 40 | 0 | 36 | 104 | 7 | 75 | 1.65e-14 | 68.6 |
MS.gene77519.t1 | AT3G13224 | 38.889 | 90 | 54 | 1 | 28 | 116 | 92 | 181 | 1.98e-14 | 69.3 |
MS.gene77519.t1 | AT3G13224 | 38.889 | 90 | 54 | 1 | 28 | 116 | 101 | 190 | 2.20e-14 | 69.3 |
MS.gene77519.t1 | AT1G20880 | 42.029 | 69 | 40 | 0 | 36 | 104 | 24 | 92 | 2.40e-14 | 68.6 |
MS.gene77519.t1 | AT1G20880 | 42.029 | 69 | 40 | 0 | 36 | 104 | 24 | 92 | 2.40e-14 | 68.6 |
MS.gene77519.t1 | AT1G20880 | 42.029 | 69 | 40 | 0 | 36 | 104 | 24 | 92 | 2.40e-14 | 68.6 |
MS.gene77519.t1 | AT1G48920 | 39.806 | 103 | 57 | 1 | 35 | 132 | 296 | 398 | 2.62e-14 | 69.3 |
MS.gene77519.t1 | AT5G04280 | 39.744 | 78 | 46 | 1 | 36 | 112 | 7 | 84 | 2.93e-14 | 68.6 |
MS.gene77519.t1 | AT2G46780 | 36.667 | 90 | 52 | 1 | 36 | 120 | 22 | 111 | 3.19e-14 | 68.6 |
MS.gene77519.t1 | AT2G46780 | 36.667 | 90 | 52 | 1 | 36 | 120 | 22 | 111 | 3.19e-14 | 68.6 |
MS.gene77519.t1 | AT1G60650 | 38.235 | 102 | 58 | 2 | 35 | 131 | 11 | 112 | 3.42e-14 | 68.2 |
MS.gene77519.t1 | AT1G60650 | 38.235 | 102 | 58 | 2 | 35 | 131 | 11 | 112 | 3.42e-14 | 68.2 |
MS.gene77519.t1 | AT2G18510 | 42.529 | 87 | 48 | 2 | 36 | 120 | 112 | 198 | 3.88e-14 | 68.6 |
MS.gene77519.t1 | AT2G27330 | 32.632 | 95 | 63 | 1 | 35 | 128 | 20 | 114 | 3.92e-14 | 65.1 |
MS.gene77519.t1 | AT5G47620 | 39.759 | 83 | 49 | 1 | 32 | 114 | 2 | 83 | 4.03e-14 | 68.6 |
MS.gene77519.t1 | AT5G47620 | 35.897 | 78 | 50 | 0 | 34 | 111 | 104 | 181 | 3.73e-12 | 63.2 |
MS.gene77519.t1 | AT5G47620 | 39.759 | 83 | 49 | 1 | 32 | 114 | 2 | 83 | 4.03e-14 | 68.6 |
MS.gene77519.t1 | AT5G47620 | 35.897 | 78 | 50 | 0 | 34 | 111 | 104 | 181 | 3.73e-12 | 63.2 |
MS.gene77519.t1 | AT5G47620 | 39.759 | 83 | 49 | 1 | 32 | 114 | 2 | 83 | 4.03e-14 | 68.6 |
MS.gene77519.t1 | AT5G47620 | 35.897 | 78 | 50 | 0 | 34 | 111 | 104 | 181 | 3.73e-12 | 63.2 |
MS.gene77519.t1 | AT1G54080 | 42.667 | 75 | 42 | 1 | 38 | 111 | 150 | 224 | 4.77e-14 | 68.6 |
MS.gene77519.t1 | AT3G13224 | 48.529 | 68 | 35 | 0 | 28 | 95 | 101 | 168 | 5.31e-14 | 67.0 |
MS.gene77519.t1 | AT2G22100 | 35.870 | 92 | 59 | 0 | 31 | 122 | 158 | 249 | 5.64e-14 | 68.2 |
MS.gene77519.t1 | AT3G14100 | 42.667 | 75 | 42 | 1 | 38 | 111 | 146 | 220 | 6.39e-14 | 68.2 |
MS.gene77519.t1 | AT1G78260 | 32.432 | 111 | 61 | 2 | 36 | 135 | 17 | 124 | 8.92e-14 | 67.0 |
MS.gene77519.t1 | AT5G47620 | 44.595 | 74 | 37 | 1 | 32 | 101 | 2 | 75 | 1.01e-13 | 67.4 |
MS.gene77519.t1 | AT5G47620 | 35.897 | 78 | 50 | 0 | 34 | 111 | 126 | 203 | 4.21e-12 | 62.8 |
MS.gene77519.t1 | AT4G39260 | 40.678 | 59 | 35 | 0 | 37 | 95 | 7 | 65 | 1.08e-13 | 63.5 |
MS.gene77519.t1 | AT4G14300 | 41.772 | 79 | 45 | 1 | 37 | 115 | 7 | 84 | 1.11e-13 | 67.4 |
MS.gene77519.t1 | AT4G14300 | 36.585 | 82 | 52 | 0 | 35 | 116 | 109 | 190 | 1.77e-13 | 66.6 |
MS.gene77519.t1 | AT4G14300 | 41.772 | 79 | 45 | 1 | 37 | 115 | 7 | 84 | 1.11e-13 | 67.4 |
MS.gene77519.t1 | AT4G14300 | 36.585 | 82 | 52 | 0 | 35 | 116 | 109 | 190 | 1.77e-13 | 66.6 |
MS.gene77519.t1 | AT2G33410 | 33.333 | 114 | 68 | 2 | 11 | 116 | 77 | 190 | 1.12e-13 | 67.4 |
MS.gene77519.t1 | AT2G33410 | 37.349 | 83 | 51 | 1 | 37 | 119 | 7 | 88 | 1.44e-13 | 67.0 |
MS.gene77519.t1 | AT4G13860 | 55.172 | 58 | 25 | 1 | 52 | 108 | 2 | 59 | 1.28e-13 | 62.4 |
MS.gene77519.t1 | AT1G78260 | 38.571 | 70 | 43 | 0 | 36 | 105 | 17 | 86 | 1.62e-13 | 66.2 |
MS.gene77519.t1 | AT2G21690 | 40.845 | 71 | 41 | 1 | 39 | 108 | 10 | 80 | 2.26e-13 | 62.8 |
MS.gene77519.t1 | AT3G54770 | 39.130 | 69 | 42 | 0 | 36 | 104 | 17 | 85 | 2.72e-13 | 65.5 |
MS.gene77519.t1 | AT3G54770 | 39.130 | 69 | 42 | 0 | 36 | 104 | 17 | 85 | 3.22e-13 | 65.1 |
MS.gene77519.t1 | AT3G18610 | 40.625 | 96 | 53 | 3 | 35 | 129 | 383 | 475 | 6.42e-13 | 65.5 |
MS.gene77519.t1 | AT1G17640 | 35.294 | 102 | 61 | 3 | 34 | 133 | 155 | 253 | 6.47e-13 | 65.1 |
MS.gene77519.t1 | AT1G17640 | 35.294 | 102 | 61 | 3 | 34 | 133 | 155 | 253 | 6.47e-13 | 65.1 |
MS.gene77519.t1 | AT1G17640 | 35.294 | 102 | 61 | 3 | 34 | 133 | 155 | 253 | 6.47e-13 | 65.1 |
MS.gene77519.t1 | AT1G71800 | 35.417 | 96 | 57 | 3 | 38 | 131 | 11 | 103 | 9.20e-13 | 64.7 |
MS.gene77519.t1 | AT3G18610 | 40.625 | 96 | 53 | 3 | 35 | 129 | 353 | 445 | 1.20e-12 | 64.7 |
MS.gene77519.t1 | AT1G17370 | 36.634 | 101 | 56 | 2 | 38 | 130 | 141 | 241 | 1.28e-12 | 64.3 |
MS.gene77519.t1 | AT1G17370 | 42.667 | 75 | 42 | 1 | 38 | 111 | 141 | 215 | 1.67e-12 | 63.9 |
MS.gene77519.t1 | AT1G47490 | 38.298 | 94 | 56 | 2 | 38 | 129 | 199 | 292 | 1.76e-12 | 63.9 |
MS.gene77519.t1 | AT1G47490 | 38.298 | 94 | 56 | 2 | 38 | 129 | 199 | 292 | 1.82e-12 | 63.5 |
MS.gene77519.t1 | AT2G37510 | 31.111 | 135 | 59 | 3 | 33 | 133 | 31 | 165 | 1.84e-12 | 61.6 |
MS.gene77519.t1 | AT1G01080 | 39.241 | 79 | 48 | 0 | 30 | 108 | 206 | 284 | 2.15e-12 | 63.2 |
MS.gene77519.t1 | AT1G01080 | 39.241 | 79 | 48 | 0 | 30 | 108 | 207 | 285 | 2.28e-12 | 63.2 |
MS.gene77519.t1 | AT3G18610 | 40.625 | 96 | 53 | 3 | 35 | 129 | 323 | 415 | 2.30e-12 | 63.5 |
MS.gene77519.t1 | AT5G47620 | 35.000 | 80 | 52 | 0 | 35 | 114 | 45 | 124 | 2.57e-12 | 63.5 |
MS.gene77519.t1 | AT1G54080 | 40.506 | 79 | 42 | 2 | 38 | 111 | 150 | 228 | 5.38e-12 | 62.4 |
MS.gene77519.t1 | AT5G53720 | 36.364 | 77 | 49 | 0 | 35 | 111 | 8 | 84 | 5.60e-12 | 58.9 |
MS.gene77519.t1 | AT1G49760 | 42.308 | 78 | 44 | 1 | 35 | 111 | 44 | 121 | 5.61e-12 | 62.8 |
MS.gene77519.t1 | AT1G49760 | 42.308 | 78 | 44 | 1 | 35 | 111 | 44 | 121 | 5.61e-12 | 62.8 |
MS.gene77519.t1 | AT1G73530 | 32.927 | 82 | 54 | 1 | 34 | 114 | 75 | 156 | 5.61e-12 | 60.8 |
MS.gene77519.t1 | AT1G47500 | 36.842 | 95 | 58 | 2 | 38 | 130 | 201 | 295 | 6.00e-12 | 62.4 |
MS.gene77519.t1 | AT4G20030 | 33.962 | 106 | 61 | 4 | 24 | 124 | 31 | 132 | 6.03e-12 | 60.1 |
MS.gene77519.t1 | AT3G15010 | 32.673 | 101 | 68 | 0 | 4 | 104 | 43 | 143 | 6.37e-12 | 62.4 |
MS.gene77519.t1 | AT3G15010 | 32.673 | 101 | 68 | 0 | 4 | 104 | 43 | 143 | 6.37e-12 | 62.4 |
MS.gene77519.t1 | AT5G40490 | 34.118 | 85 | 55 | 1 | 33 | 116 | 127 | 211 | 7.50e-12 | 62.0 |
MS.gene77519.t1 | AT5G54900 | 40.741 | 81 | 46 | 2 | 38 | 116 | 156 | 236 | 8.43e-12 | 62.0 |
MS.gene77519.t1 | AT5G40490 | 34.118 | 85 | 55 | 1 | 35 | 118 | 112 | 196 | 9.49e-12 | 62.0 |
MS.gene77519.t1 | AT1G47500 | 36.842 | 95 | 58 | 2 | 38 | 130 | 201 | 295 | 9.57e-12 | 61.6 |
MS.gene77519.t1 | AT5G11412 | 34.211 | 76 | 50 | 0 | 36 | 111 | 52 | 127 | 1.02e-11 | 60.1 |
MS.gene77519.t1 | AT4G03110 | 37.647 | 85 | 52 | 1 | 38 | 121 | 351 | 435 | 1.21e-11 | 61.6 |
MS.gene77519.t1 | AT2G19380 | 28.302 | 106 | 76 | 0 | 9 | 114 | 381 | 486 | 1.24e-11 | 61.6 |
MS.gene77519.t1 | AT5G53680 | 34.615 | 78 | 49 | 1 | 36 | 111 | 13 | 90 | 1.28e-11 | 59.7 |
MS.gene77519.t1 | AT4G00830 | 35.632 | 87 | 53 | 2 | 24 | 109 | 106 | 190 | 1.54e-11 | 61.2 |
MS.gene77519.t1 | AT4G00830 | 35.632 | 87 | 53 | 2 | 24 | 109 | 106 | 190 | 1.54e-11 | 61.2 |
MS.gene77519.t1 | AT4G00830 | 35.632 | 87 | 53 | 2 | 24 | 109 | 106 | 190 | 1.61e-11 | 61.2 |
MS.gene77519.t1 | AT4G00830 | 35.632 | 87 | 53 | 2 | 24 | 109 | 106 | 190 | 1.61e-11 | 61.2 |
MS.gene77519.t1 | AT4G00830 | 35.632 | 87 | 53 | 2 | 24 | 109 | 106 | 190 | 1.61e-11 | 61.2 |
MS.gene77519.t1 | AT3G10400 | 39.241 | 79 | 47 | 1 | 36 | 113 | 57 | 135 | 2.20e-11 | 60.1 |
MS.gene77519.t1 | AT5G51300 | 36.585 | 82 | 51 | 1 | 31 | 111 | 475 | 556 | 4.74e-11 | 60.1 |
MS.gene77519.t1 | AT5G51300 | 36.585 | 82 | 51 | 1 | 31 | 111 | 475 | 556 | 4.74e-11 | 60.1 |
MS.gene77519.t1 | AT5G51300 | 36.585 | 82 | 51 | 1 | 31 | 111 | 475 | 556 | 4.74e-11 | 60.1 |
MS.gene77519.t1 | AT1G13690 | 37.333 | 75 | 46 | 1 | 38 | 111 | 15 | 89 | 8.62e-11 | 57.4 |
MS.gene77519.t1 | AT4G34110 | 40.506 | 79 | 46 | 1 | 35 | 112 | 35 | 113 | 9.07e-11 | 59.3 |
Find 56 sgRNAs with CRISPR-Local
Find 80 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTGTTCATTAGGATTTAAA+TGG | 0.219990 | 3.2:+72509172 | MS.gene77519:intron |
GGCGGCGGCGGTGGCGGATA+TGG | 0.258028 | 3.2:+72509265 | MS.gene77519:CDS |
ACTGGAAGATCAAGGGGATT+TGG | 0.334462 | 3.2:+72509022 | MS.gene77519:CDS |
GGCTACAGCGGCGGCGGCGG+TGG | 0.341431 | 3.2:+72509256 | MS.gene77519:CDS |
GGCGGATATGGCGGCGGTGG+CGG | 0.352054 | 3.2:+72509277 | MS.gene77519:CDS |
GGTGGCTACAGCGGCGGCGG+CGG | 0.367068 | 3.2:+72509253 | MS.gene77519:CDS |
ATGGCTTTCTGTAACAAGAT+TGG | 0.370753 | 3.2:+72508342 | MS.gene77519:CDS |
TACAGCGGCGGCGGCGGTGG+CGG | 0.379096 | 3.2:+72509259 | MS.gene77519:CDS |
GGCGGCGGTGGCGGATATGG+CGG | 0.422743 | 3.2:+72509268 | MS.gene77519:CDS |
GGATACAGCGGCGGTGGTGG+CGG | 0.423190 | 3.2:+72509301 | MS.gene77519:CDS |
TGTTGATGACCAGTCTCTTA+AGG | 0.428494 | 3.2:+72508572 | MS.gene77519:CDS |
GGTGGCGGATATGGCGGCGG+TGG | 0.429870 | 3.2:+72509274 | MS.gene77519:CDS |
GCGGCGGTGGTGGCGGCGGT+TGG | 0.430100 | 3.2:+72509308 | MS.gene77519:CDS |
GGTGGATACAGCGGCGGTGG+TGG | 0.438997 | 3.2:+72509298 | MS.gene77519:CDS |
GGATATGGCGGCGGTGGCGG+TGG | 0.439055 | 3.2:+72509280 | MS.gene77519:CDS |
GGCGGTGGCGGATATGGCGG+CGG | 0.443925 | 3.2:+72509271 | MS.gene77519:CDS |
GCCGCCGCTGTAGCCACCTT+CGG | 0.450300 | 3.2:-72509248 | None:intergenic |
TACAGCGGCGGTGGTGGCGG+CGG | 0.454744 | 3.2:+72509304 | MS.gene77519:CDS |
TTGTTCATTAGGATTTAAAT+GGG | 0.460304 | 3.2:+72509173 | MS.gene77519:intron |
TAGTTAAGCATGGATGAAAC+AGG | 0.461015 | 3.2:-72508405 | None:intergenic |
GGCGGTGGATACAGCGGCGG+TGG | 0.479612 | 3.2:+72509295 | MS.gene77519:CDS |
AGCACTCTCCATGGATGGAC+AGG | 0.490812 | 3.2:+72509081 | MS.gene77519:CDS |
GAAGGTGGCTACAGCGGCGG+CGG | 0.511885 | 3.2:+72509250 | MS.gene77519:CDS |
ATAGAGACACTGGAAGATCA+AGG | 0.517492 | 3.2:+72509014 | MS.gene77519:CDS |
TAAATGCATCCTTAAGAGAC+TGG | 0.532048 | 3.2:-72508581 | None:intergenic |
AAGGATGCATTTACAACCTA+CGG | 0.532917 | 3.2:+72508591 | MS.gene77519:CDS |
GGTCATCAACATGGTAAGAA+AGG | 0.538171 | 3.2:-72508560 | None:intergenic |
GGTGGACCTCGTTCCGAAGG+TGG | 0.542049 | 3.2:+72509235 | MS.gene77519:CDS |
TATTACAACCTGTCCATCCA+TGG | 0.550532 | 3.2:-72509089 | None:intergenic |
GTCCTATGCAAATGATAGAC+AGG | 0.554294 | 3.2:+72509210 | MS.gene77519:CDS |
TGAAGTTGCAGACTCTTCAC+TGG | 0.556568 | 3.2:-72509059 | None:intergenic |
TGCAACTTCAGCACTCTCCA+TGG | 0.559718 | 3.2:+72509072 | MS.gene77519:CDS |
AACCTACGGAGAAGTGGTTG+AGG | 0.563954 | 3.2:+72508605 | MS.gene77519:CDS |
ACTTCAGCACTCTCCATGGA+TGG | 0.565520 | 3.2:+72509076 | MS.gene77519:CDS |
GCTGGTGGACCTCGTTCCGA+AGG | 0.574021 | 3.2:+72509232 | MS.gene77519:CDS |
TCCGAAGGTGGCTACAGCGG+CGG | 0.577472 | 3.2:+72509247 | MS.gene77519:CDS |
GAGTAGCACCTTGCCTCAAG+AGG | 0.579009 | 3.2:-72508368 | None:intergenic |
GTTATCACTGATAGAGACAC+TGG | 0.581409 | 3.2:+72509004 | MS.gene77519:CDS |
TATGCAAATGATAGACAGGC+TGG | 0.581925 | 3.2:+72509214 | MS.gene77519:CDS |
TAGAGACACTGGAAGATCAA+GGG | 0.594765 | 3.2:+72509015 | MS.gene77519:CDS |
CTGTAGCCACCTTCGGAACG+AGG | 0.599008 | 3.2:-72509241 | None:intergenic |
ACCTACGGAGAAGTGGTTGA+GGG | 0.603405 | 3.2:+72508606 | MS.gene77519:CDS |
AGAGACACTGGAAGATCAAG+GGG | 0.604078 | 3.2:+72509016 | MS.gene77519:CDS |
ATTTACAACCTACGGAGAAG+TGG | 0.607456 | 3.2:+72508599 | MS.gene77519:CDS |
GGCGGTGGCGGTGGATACAG+CGG | 0.611968 | 3.2:+72509289 | MS.gene77519:CDS |
CGTTCCGAAGGTGGCTACAG+CGG | 0.613095 | 3.2:+72509244 | MS.gene77519:CDS |
GTGGCGCAAGTAGTTAAGCA+TGG | 0.622132 | 3.2:-72508415 | None:intergenic |
AGGTGCTACTCAGAGCACTC+AGG | 0.629518 | 3.2:+72508380 | MS.gene77519:CDS |
ATTGGAAACCTCTTGAGGCA+AGG | 0.631105 | 3.2:+72508360 | MS.gene77519:CDS |
TAAGAGACTGGTCATCAACA+TGG | 0.631495 | 3.2:-72508569 | None:intergenic |
AGCCTGTCTATCATTTGCAT+AGG | 0.655393 | 3.2:-72509212 | None:intergenic |
ACAAGATTGGAAACCTCTTG+AGG | 0.658250 | 3.2:+72508355 | MS.gene77519:CDS |
ACCCTCAACCACTTCTCCGT+AGG | 0.658961 | 3.2:-72508607 | None:intergenic |
GCAAATGATAGACAGGCTGG+TGG | 0.673979 | 3.2:+72509217 | MS.gene77519:CDS |
GGTGGCGGTGGATACAGCGG+CGG | 0.710083 | 3.2:+72509292 | MS.gene77519:CDS |
AAAGCTTGCTTGAAGACATG+TGG | 0.718559 | 3.2:-72508434 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | GTTTTTATAATAAATAACTT+TGG | + | chr3.2:72508962-72508981 | MS.gene77519:intron | 10.0% |
!!! | ATTTTAATTGTCATTTTAGT+CGG | + | chr3.2:72509135-72509154 | MS.gene77519:intron | 15.0% |
!! | GAATGTTAGAAGTTAAATTT+GGG | + | chr3.2:72508726-72508745 | MS.gene77519:intron | 20.0% |
!! | TTGTTCATTAGGATTTAAAT+GGG | + | chr3.2:72509173-72509192 | MS.gene77519:intron | 20.0% |
!!! | TCTAATAAAATGTATGGTTT+TGG | + | chr3.2:72508521-72508540 | MS.gene77519:intron | 20.0% |
!!! | TTTATCTAGTTTTTTTATGC+TGG | + | chr3.2:72508479-72508498 | MS.gene77519:intron | 20.0% |
! | CTTGTTCATTAGGATTTAAA+TGG | + | chr3.2:72509172-72509191 | MS.gene77519:intron | 25.0% |
! | GCTGGTTAGTATTATTATTA+TGG | + | chr3.2:72508497-72508516 | MS.gene77519:intron | 25.0% |
! | GGAATGTTAGAAGTTAAATT+TGG | + | chr3.2:72508725-72508744 | MS.gene77519:intron | 25.0% |
!! | AGTCTTATGTTGATACAAAA+GGG | - | chr3.2:72508694-72508713 | None:intergenic | 25.0% |
!!! | AAATGTATGGTTTTGGATTT+TGG | + | chr3.2:72508528-72508547 | MS.gene77519:intron | 25.0% |
!!! | TATGGCTCTAATAAAATGTA+TGG | + | chr3.2:72508515-72508534 | MS.gene77519:intron | 25.0% |
CACTTTAATGTATCAACTAC+CGG | - | chr3.2:72508891-72508910 | None:intergenic | 30.0% | |
GTCTTATGTTGATACAAAAG+GGG | - | chr3.2:72508693-72508712 | None:intergenic | 30.0% | |
TGAAGAGTAAGTCAAATTTC+CGG | + | chr3.2:72508869-72508888 | MS.gene77519:intron | 30.0% | |
! | CAGTCTTATGTTGATACAAA+AGG | - | chr3.2:72508695-72508714 | None:intergenic | 30.0% |
!! | TTTCATTGGAGGTATTGATT+TGG | + | chr3.2:72508455-72508474 | MS.gene77519:intron | 30.0% |
AAGGATGCATTTACAACCTA+CGG | + | chr3.2:72508591-72508610 | MS.gene77519:CDS | 35.0% | |
ATGGCTTTCTGTAACAAGAT+TGG | + | chr3.2:72508342-72508361 | MS.gene77519:CDS | 35.0% | |
CTGACATACTCTTGTTCATT+AGG | + | chr3.2:72509162-72509181 | MS.gene77519:intron | 35.0% | |
TAAATGCATCCTTAAGAGAC+TGG | - | chr3.2:72508584-72508603 | None:intergenic | 35.0% | |
TAGTTAAGCATGGATGAAAC+AGG | - | chr3.2:72508408-72508427 | None:intergenic | 35.0% | |
! | ACATAAGACTGCATTGACAT+TGG | + | chr3.2:72508704-72508723 | MS.gene77519:intron | 35.0% |
! | TCTTCAAGCAAGCTTTTCAT+TGG | + | chr3.2:72508441-72508460 | MS.gene77519:CDS | 35.0% |
!! | GCATCTGCTTTGTTTGATTA+TGG | + | chr3.2:72508938-72508957 | MS.gene77519:intron | 35.0% |
!! | GTTTTGGATTTTGGTATCAC+AGG | + | chr3.2:72508537-72508556 | MS.gene77519:intron | 35.0% |
ACAAGATTGGAAACCTCTTG+AGG | + | chr3.2:72508355-72508374 | MS.gene77519:CDS | 40.0% | |
AGCCTGTCTATCATTTGCAT+AGG | - | chr3.2:72509215-72509234 | None:intergenic | 40.0% | |
ATAGAGACACTGGAAGATCA+AGG | + | chr3.2:72509014-72509033 | MS.gene77519:CDS | 40.0% | |
ATTTACAACCTACGGAGAAG+TGG | + | chr3.2:72508599-72508618 | MS.gene77519:CDS | 40.0% | |
CTGAAGAACACATTTCAGTG+GGG | + | chr3.2:72508765-72508784 | MS.gene77519:intron | 40.0% | |
GCTGAAGAACACATTTCAGT+GGG | + | chr3.2:72508764-72508783 | MS.gene77519:intron | 40.0% | |
GGTCATCAACATGGTAAGAA+AGG | - | chr3.2:72508563-72508582 | None:intergenic | 40.0% | |
GTCCTATGCAAATGATAGAC+AGG | + | chr3.2:72509210-72509229 | MS.gene77519:CDS | 40.0% | |
GTTATCACTGATAGAGACAC+TGG | + | chr3.2:72509004-72509023 | MS.gene77519:CDS | 40.0% | |
TAGAGACACTGGAAGATCAA+GGG | + | chr3.2:72509015-72509034 | MS.gene77519:CDS | 40.0% | |
TATGCAAATGATAGACAGGC+TGG | + | chr3.2:72509214-72509233 | MS.gene77519:CDS | 40.0% | |
TATTACAACCTGTCCATCCA+TGG | - | chr3.2:72509092-72509111 | None:intergenic | 40.0% | |
TGCTGAAGAACACATTTCAG+TGG | + | chr3.2:72508763-72508782 | MS.gene77519:intron | 40.0% | |
! | AAAGCTTGCTTGAAGACATG+TGG | - | chr3.2:72508437-72508456 | None:intergenic | 40.0% |
! | TAAGAGACTGGTCATCAACA+TGG | - | chr3.2:72508572-72508591 | None:intergenic | 40.0% |
! | TCAAGCAAGCTTTTCATTGG+AGG | + | chr3.2:72508444-72508463 | MS.gene77519:CDS | 40.0% |
!! | TGTTGATGACCAGTCTCTTA+AGG | + | chr3.2:72508572-72508591 | MS.gene77519:CDS | 40.0% |
ACTGGAAGATCAAGGGGATT+TGG | + | chr3.2:72509022-72509041 | MS.gene77519:CDS | 45.0% | |
AGAGACACTGGAAGATCAAG+GGG | + | chr3.2:72509016-72509035 | MS.gene77519:CDS | 45.0% | |
ATTGGAAACCTCTTGAGGCA+AGG | + | chr3.2:72508360-72508379 | MS.gene77519:CDS | 45.0% | |
TGAAGTTGCAGACTCTTCAC+TGG | - | chr3.2:72509062-72509081 | None:intergenic | 45.0% | |
AACCTACGGAGAAGTGGTTG+AGG | + | chr3.2:72508605-72508624 | MS.gene77519:CDS | 50.0% | |
ACCTACGGAGAAGTGGTTGA+GGG | + | chr3.2:72508606-72508625 | MS.gene77519:CDS | 50.0% | |
ACTTCAGCACTCTCCATGGA+TGG | + | chr3.2:72509076-72509095 | MS.gene77519:CDS | 50.0% | |
GCAAATGATAGACAGGCTGG+TGG | + | chr3.2:72509217-72509236 | MS.gene77519:CDS | 50.0% | |
GTGGCGCAAGTAGTTAAGCA+TGG | - | chr3.2:72508418-72508437 | None:intergenic | 50.0% | |
TGCAACTTCAGCACTCTCCA+TGG | + | chr3.2:72509072-72509091 | MS.gene77519:CDS | 50.0% | |
ACCCTCAACCACTTCTCCGT+AGG | - | chr3.2:72508610-72508629 | None:intergenic | 55.0% | |
AGCACTCTCCATGGATGGAC+AGG | + | chr3.2:72509081-72509100 | MS.gene77519:CDS | 55.0% | |
GAGTAGCACCTTGCCTCAAG+AGG | - | chr3.2:72508371-72508390 | None:intergenic | 55.0% | |
!! | AGGTGCTACTCAGAGCACTC+AGG | + | chr3.2:72508380-72508399 | MS.gene77519:CDS | 55.0% |
CGTTCCGAAGGTGGCTACAG+CGG | + | chr3.2:72509244-72509263 | MS.gene77519:CDS | 60.0% | |
CTGTAGCCACCTTCGGAACG+AGG | - | chr3.2:72509244-72509263 | None:intergenic | 60.0% | |
GGTGGACCTCGTTCCGAAGG+TGG | + | chr3.2:72509235-72509254 | MS.gene77519:CDS | 65.0% | |
TCCGAAGGTGGCTACAGCGG+CGG | + | chr3.2:72509247-72509266 | MS.gene77519:CDS | 65.0% | |
! | GCTGGTGGACCTCGTTCCGA+AGG | + | chr3.2:72509232-72509251 | MS.gene77519:CDS | 65.0% |
GAAGGTGGCTACAGCGGCGG+CGG | + | chr3.2:72509250-72509269 | MS.gene77519:CDS | 70.0% | |
GCCGCCGCTGTAGCCACCTT+CGG | - | chr3.2:72509251-72509270 | None:intergenic | 70.0% | |
GGTGGATACAGCGGCGGTGG+TGG | + | chr3.2:72509298-72509317 | MS.gene77519:CDS | 70.0% | |
! | GGATACAGCGGCGGTGGTGG+CGG | + | chr3.2:72509301-72509320 | MS.gene77519:CDS | 70.0% |
! | GGCGGTGGCGGTGGATACAG+CGG | + | chr3.2:72509289-72509308 | MS.gene77519:CDS | 70.0% |
! | GGTGGCGGTGGATACAGCGG+CGG | + | chr3.2:72509292-72509311 | MS.gene77519:CDS | 70.0% |
GGCGGATATGGCGGCGGTGG+CGG | + | chr3.2:72509277-72509296 | MS.gene77519:CDS | 75.0% | |
GGCGGTGGATACAGCGGCGG+TGG | + | chr3.2:72509295-72509314 | MS.gene77519:CDS | 75.0% | |
! | GGATATGGCGGCGGTGGCGG+TGG | + | chr3.2:72509280-72509299 | MS.gene77519:CDS | 75.0% |
!! | GGCGGCGGTGGCGGATATGG+CGG | + | chr3.2:72509268-72509287 | MS.gene77519:CDS | 75.0% |
!! | GGCGGTGGCGGATATGGCGG+CGG | + | chr3.2:72509271-72509290 | MS.gene77519:CDS | 75.0% |
!! | GGTGGCGGATATGGCGGCGG+TGG | + | chr3.2:72509274-72509293 | MS.gene77519:CDS | 75.0% |
!! | TACAGCGGCGGTGGTGGCGG+CGG | + | chr3.2:72509304-72509323 | MS.gene77519:CDS | 75.0% |
! | GGTGGCTACAGCGGCGGCGG+CGG | + | chr3.2:72509253-72509272 | MS.gene77519:CDS | 80.0% |
! | TACAGCGGCGGCGGCGGTGG+CGG | + | chr3.2:72509259-72509278 | MS.gene77519:CDS | 80.0% |
!!! | GGCGGCGGCGGTGGCGGATA+TGG | + | chr3.2:72509265-72509284 | MS.gene77519:CDS | 80.0% |
! | GGCTACAGCGGCGGCGGCGG+TGG | + | chr3.2:72509256-72509275 | MS.gene77519:CDS | 85.0% |
!!! | GCGGCGGTGGTGGCGGCGGT+TGG | + | chr3.2:72509308-72509327 | MS.gene77519:CDS | 85.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.2 | gene | 72508342 | 72509333 | 72508342 | ID=MS.gene77519 |
chr3.2 | mRNA | 72508342 | 72509333 | 72508342 | ID=MS.gene77519.t1;Parent=MS.gene77519 |
chr3.2 | exon | 72508342 | 72508465 | 72508342 | ID=MS.gene77519.t1.exon1;Parent=MS.gene77519.t1 |
chr3.2 | CDS | 72508342 | 72508465 | 72508342 | ID=cds.MS.gene77519.t1;Parent=MS.gene77519.t1 |
chr3.2 | exon | 72508559 | 72508627 | 72508559 | ID=MS.gene77519.t1.exon2;Parent=MS.gene77519.t1 |
chr3.2 | CDS | 72508559 | 72508627 | 72508559 | ID=cds.MS.gene77519.t1;Parent=MS.gene77519.t1 |
chr3.2 | exon | 72508999 | 72509102 | 72508999 | ID=MS.gene77519.t1.exon3;Parent=MS.gene77519.t1 |
chr3.2 | CDS | 72508999 | 72509102 | 72508999 | ID=cds.MS.gene77519.t1;Parent=MS.gene77519.t1 |
chr3.2 | exon | 72509184 | 72509333 | 72509184 | ID=MS.gene77519.t1.exon4;Parent=MS.gene77519.t1 |
chr3.2 | CDS | 72509184 | 72509333 | 72509184 | ID=cds.MS.gene77519.t1;Parent=MS.gene77519.t1 |
Gene Sequence |
Protein sequence |