Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene77532.t1 | XP_003601683.1 | 99.4 | 471 | 3 | 0 | 1 | 471 | 1 | 471 | 7.90E-278 | 965.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene77532.t1 | O23254 | 90.7 | 471 | 44 | 0 | 1 | 471 | 1 | 471 | 1.8e-259 | 896.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene77532.t1 | G7JAR7 | 99.4 | 471 | 3 | 0 | 1 | 471 | 1 | 471 | 5.7e-278 | 965.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene77532 | MS.gene86222 | PPI |
MS.gene77532 | MS.gene002066 | PPI |
MS.gene77532 | MS.gene072040 | PPI |
MS.gene77532 | MS.gene29165 | PPI |
MS.gene77532 | MS.gene027729 | PPI |
MS.gene77532 | MS.gene047182 | PPI |
MS.gene77532 | MS.gene00638 | PPI |
MS.gene44289 | MS.gene77532 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene77532.t1 | MTR_3g084310 | 99.363 | 471 | 3 | 0 | 1 | 471 | 1 | 471 | 0.0 | 974 |
MS.gene77532.t1 | MTR_8g081510 | 94.268 | 471 | 27 | 0 | 1 | 471 | 1 | 471 | 0.0 | 935 |
MS.gene77532.t1 | MTR_3g084310 | 97.802 | 364 | 8 | 0 | 1 | 364 | 1 | 364 | 0.0 | 748 |
MS.gene77532.t1 | MTR_2g006570 | 64.440 | 464 | 160 | 1 | 4 | 462 | 128 | 591 | 0.0 | 645 |
MS.gene77532.t1 | MTR_3g073470 | 64.425 | 461 | 156 | 2 | 7 | 462 | 118 | 575 | 0.0 | 638 |
MS.gene77532.t1 | MTR_2g006570 | 64.762 | 420 | 143 | 1 | 48 | 462 | 1 | 420 | 0.0 | 585 |
MS.gene77532.t1 | MTR_5g030950 | 58.369 | 466 | 187 | 4 | 9 | 469 | 53 | 516 | 0.0 | 555 |
MS.gene77532.t1 | MTR_5g067060 | 57.602 | 467 | 189 | 5 | 9 | 469 | 42 | 505 | 0.0 | 551 |
MS.gene77532.t1 | MTR_2g018290 | 59.607 | 458 | 165 | 6 | 12 | 461 | 87 | 532 | 0.0 | 544 |
MS.gene77532.t1 | MTR_7g108420 | 48.519 | 439 | 183 | 9 | 37 | 462 | 1 | 409 | 1.86e-129 | 381 |
MS.gene77532.t1 | MTR_1g073580 | 44.068 | 118 | 65 | 1 | 317 | 433 | 83 | 200 | 6.62e-24 | 100 |
MS.gene77532.t1 | MTR_1g073580 | 30.942 | 223 | 133 | 6 | 157 | 363 | 1 | 218 | 6.01e-20 | 89.4 |
MS.gene77532.t1 | MTR_3g062030 | 59.494 | 79 | 28 | 1 | 274 | 352 | 13 | 87 | 2.89e-21 | 92.8 |
MS.gene77532.t1 | MTR_7g070020 | 53.659 | 82 | 28 | 2 | 336 | 410 | 1 | 79 | 6.77e-20 | 85.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene77532.t1 | AT4G13930 | 90.658 | 471 | 44 | 0 | 1 | 471 | 1 | 471 | 0.0 | 902 |
MS.gene77532.t1 | AT4G13890 | 78.541 | 466 | 100 | 0 | 1 | 466 | 1 | 466 | 0.0 | 794 |
MS.gene77532.t1 | AT4G13890 | 79.540 | 391 | 80 | 0 | 1 | 391 | 1 | 391 | 0.0 | 672 |
MS.gene77532.t1 | AT1G36370 | 63.305 | 466 | 166 | 1 | 4 | 464 | 130 | 595 | 0.0 | 635 |
MS.gene77532.t1 | AT1G22020 | 62.284 | 464 | 170 | 1 | 4 | 462 | 134 | 597 | 0.0 | 624 |
MS.gene77532.t1 | AT1G22020 | 62.284 | 464 | 170 | 1 | 4 | 462 | 134 | 597 | 0.0 | 624 |
MS.gene77532.t1 | AT4G32520 | 59.785 | 465 | 168 | 6 | 3 | 461 | 77 | 528 | 0.0 | 572 |
MS.gene77532.t1 | AT4G32520 | 59.785 | 465 | 168 | 6 | 3 | 461 | 77 | 528 | 0.0 | 572 |
MS.gene77532.t1 | AT4G37930 | 57.479 | 468 | 192 | 4 | 9 | 471 | 52 | 517 | 0.0 | 561 |
MS.gene77532.t1 | AT5G26780 | 56.410 | 468 | 197 | 4 | 9 | 471 | 52 | 517 | 0.0 | 545 |
MS.gene77532.t1 | AT5G26780 | 56.410 | 468 | 197 | 4 | 9 | 471 | 52 | 517 | 0.0 | 545 |
MS.gene77532.t1 | AT5G26780 | 54.545 | 484 | 197 | 5 | 9 | 471 | 52 | 533 | 0.0 | 535 |
MS.gene77532.t1 | AT5G26780 | 54.545 | 484 | 197 | 5 | 9 | 471 | 52 | 533 | 0.0 | 535 |
Find 161 sgRNAs with CRISPR-Local
Find 188 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCTATTAGGTCGTGGATTTC+TGG | 0.053246 | 3.2:+72607932 | None:intergenic |
ACTTCTCAACATCAGCTTTA+AGG | 0.149316 | 3.2:+72606277 | None:intergenic |
CAACAACCCATAAGAGTTTA+AGG | 0.154381 | 3.2:-72607172 | MS.gene77532:CDS |
TGGGACCCCTTAAACTCTTA+TGG | 0.221123 | 3.2:+72607165 | None:intergenic |
TATCCTAGAGATTGGGATTA+TGG | 0.237401 | 3.2:-72607407 | MS.gene77532:CDS |
CTTTGAGAGTTTACCGTATA+AGG | 0.237793 | 3.2:-72607522 | MS.gene77532:CDS |
GTGCCCCAGCTATGACTTCC+AGG | 0.297783 | 3.2:-72606440 | MS.gene77532:CDS |
TCCACCTCGACGCCGCCACC+TGG | 0.297917 | 3.2:-72607712 | MS.gene77532:CDS |
TTGAAACAGGCCACCACGCC+TGG | 0.308348 | 3.2:-72606984 | MS.gene77532:CDS |
CCATACTCTTGCAGGCAATA+AGG | 0.320283 | 3.2:-72606738 | MS.gene77532:intron |
GGGACCCCTTAAACTCTTAT+GGG | 0.322732 | 3.2:+72607166 | None:intergenic |
CTATTAGGTCGTGGATTTCT+GGG | 0.323356 | 3.2:+72607933 | None:intergenic |
TTCTCAGGCTGACCCTTCTT+AGG | 0.327500 | 3.2:+72607104 | None:intergenic |
TGTTGGTGAGGGCGCTTCCT+AGG | 0.327933 | 3.2:+72607831 | None:intergenic |
GTGTTTCCCCATTCACTAAC+TGG | 0.331437 | 3.2:+72607974 | None:intergenic |
TCTTGCTGTTGCTTTGAAAC+AGG | 0.352836 | 3.2:-72606997 | MS.gene77532:CDS |
CTAGAGATTCAAAAGGAATA+TGG | 0.360286 | 3.2:-72606354 | MS.gene77532:CDS |
ACTCATGGTTACTATACTTC+CGG | 0.367102 | 3.2:-72607575 | MS.gene77532:CDS |
CGGGGTTTATTGATTATGAT+AGG | 0.373858 | 3.2:-72607487 | MS.gene77532:CDS |
TAGTGGCCTTGTTGCTGCTC+AGG | 0.378762 | 3.2:-72607324 | MS.gene77532:intron |
TGACCCTTCTTAGGTGGCTT+AGG | 0.381473 | 3.2:+72607113 | None:intergenic |
CCACCTCGACGCCGCCACCT+GGG | 0.383946 | 3.2:-72607711 | MS.gene77532:CDS |
GGCCACCACGCCTGGGTTCA+AGG | 0.389046 | 3.2:-72606976 | MS.gene77532:CDS |
AGCTATGACTTCCAGGGGTC+TGG | 0.390169 | 3.2:-72606433 | MS.gene77532:CDS |
TAGGTTGGAGGAGAAAGCTT+TGG | 0.396658 | 3.2:-72607468 | MS.gene77532:CDS |
TGTGATATGGCTCATATTAG+TGG | 0.398072 | 3.2:-72607341 | MS.gene77532:CDS |
CATGCCTTCGGAGTATTTGT+TGG | 0.411143 | 3.2:+72607814 | None:intergenic |
TGAAAATCATCTTGTCTTGT+GGG | 0.412161 | 3.2:-72606868 | MS.gene77532:CDS |
TCCGCCGTAGTAACGGTTAC+CGG | 0.414922 | 3.2:+72607790 | None:intergenic |
AGACCAAAGTTGATTATTTG+TGG | 0.418304 | 3.2:-72607440 | MS.gene77532:CDS |
AACGTTGACGCCCCAGGTGG+CGG | 0.429090 | 3.2:+72607700 | None:intergenic |
CCGTTCTCAATCCTCATGAT+AGG | 0.429413 | 3.2:-72607634 | MS.gene77532:CDS |
GTTTATTGATTATGATAGGT+TGG | 0.431703 | 3.2:-72607483 | MS.gene77532:CDS |
TAGGTGGCTTAGGTCCCTTC+CGG | 0.432847 | 3.2:+72607123 | None:intergenic |
TGCATTGGCCTTAACTTGCT+TGG | 0.435848 | 3.2:+72606947 | None:intergenic |
TTGTGGGATCTCCGCCCTCT+TGG | 0.438255 | 3.2:-72606852 | MS.gene77532:CDS |
GGGACCTAAGCCACCTAAGA+AGG | 0.441492 | 3.2:-72607117 | MS.gene77532:CDS |
CTCCGCCCTCTTGGCTTGAC+CGG | 0.443426 | 3.2:-72606843 | MS.gene77532:intron |
GAAGTGCTTATCCTAGAGAT+TGG | 0.443642 | 3.2:-72607415 | MS.gene77532:CDS |
AAATCATAAACTGCATTCTC+AGG | 0.445883 | 3.2:+72607089 | None:intergenic |
CCTTGGCACCTGGAGGAGTC+AGG | 0.451905 | 3.2:-72606649 | MS.gene77532:CDS |
AAATACTCCGAAGGCATGCC+CGG | 0.452964 | 3.2:-72607809 | MS.gene77532:CDS |
GTTCGATTCCGCGGCATTGA+CGG | 0.453190 | 3.2:+72607897 | None:intergenic |
TCAGCATCATTTGATATGCC+TGG | 0.454342 | 3.2:-72606252 | MS.gene77532:CDS |
AACAACCCATAAGAGTTTAA+GGG | 0.454960 | 3.2:-72607171 | MS.gene77532:CDS |
CAATCCTCATGATAGGATCA+TGG | 0.456642 | 3.2:-72607627 | MS.gene77532:CDS |
CAATGGATCCAGTTAGTGAA+TGG | 0.456981 | 3.2:-72607982 | MS.gene77532:CDS |
TGAGCTCAAGTACAAGGATT+AGG | 0.457742 | 3.2:-72606217 | None:intergenic |
TTCGGAGTATTTGTTGGTGA+GGG | 0.459324 | 3.2:+72607820 | None:intergenic |
GGCCTATGCCAAGCAAGTTA+AGG | 0.461054 | 3.2:-72606955 | MS.gene77532:CDS |
TTGGCATAGGCCTTGAACCC+AGG | 0.465093 | 3.2:+72606966 | None:intergenic |
GTTGGTGAGGGCGCTTCCTA+GGG | 0.465658 | 3.2:+72607832 | None:intergenic |
TATAAGGTGAATTCGACAAC+GGG | 0.467057 | 3.2:-72607506 | MS.gene77532:CDS |
CTGAAAATCATCTTGTCTTG+TGG | 0.469345 | 3.2:-72606869 | MS.gene77532:CDS |
CCACCACAAATAATCAACTT+TGG | 0.471153 | 3.2:+72607437 | None:intergenic |
GTCCTTCTCAACCAGACCCC+TGG | 0.471209 | 3.2:+72606422 | None:intergenic |
GGCGAAATTCGCCGGTGAGC+CGG | 0.471948 | 3.2:+72607667 | None:intergenic |
GTTGTCGAATTCACCTTATA+CGG | 0.475954 | 3.2:+72607509 | None:intergenic |
TTACCAATCCTGACTCCTCC+AGG | 0.477314 | 3.2:+72606641 | None:intergenic |
GATAGTAGTGCCTTGGCACC+TGG | 0.479436 | 3.2:-72606659 | MS.gene77532:CDS |
AGACCCCTGGAAGTCATAGC+TGG | 0.480209 | 3.2:+72606435 | None:intergenic |
ACGGTTACCGGGCATGCCTT+CGG | 0.480831 | 3.2:+72607802 | None:intergenic |
CAACAGCAAGAGCACCAATC+TGG | 0.482879 | 3.2:+72607009 | None:intergenic |
AATGGATCCAGTTAGTGAAT+GGG | 0.485642 | 3.2:-72607981 | MS.gene77532:CDS |
AAGTGCTTATCCTAGAGATT+GGG | 0.489191 | 3.2:-72607414 | MS.gene77532:CDS |
AGTTTAAGGGGTCCCAGGGC+TGG | 0.495042 | 3.2:-72607158 | MS.gene77532:CDS |
AGCTCAGACACTAGGAATCC+AGG | 0.498066 | 3.2:+72606234 | None:intergenic |
TTCGCCGGTGAGCCGGAGTA+AGG | 0.500155 | 3.2:+72607674 | None:intergenic |
ATAAGAGTTTAAGGGGTCCC+AGG | 0.506409 | 3.2:-72607163 | MS.gene77532:CDS |
ATTTCCAAGTGCAACTGCAT+TGG | 0.507929 | 3.2:+72606932 | None:intergenic |
GGCCTTAACTTGCTTGGCAT+AGG | 0.510929 | 3.2:+72606953 | None:intergenic |
GTGTAAGCGGCGAAATTCGC+CGG | 0.512076 | 3.2:+72607659 | None:intergenic |
AAGGCCAATGCAGTTGCACT+TGG | 0.514829 | 3.2:-72606936 | MS.gene77532:CDS |
TTCCAGGGGTCTGGTTGAGA+AGG | 0.515430 | 3.2:-72606424 | MS.gene77532:CDS |
ATGGGACTGGATCTACCTTC+TGG | 0.519276 | 3.2:-72607608 | MS.gene77532:CDS |
CTTCCATAATCCCAATCTCT+AGG | 0.521993 | 3.2:+72607404 | None:intergenic |
CTAGAGATTGGGATTATGGA+AGG | 0.522411 | 3.2:-72607403 | MS.gene77532:CDS |
CTTCGGAGTATTTGTTGGTG+AGG | 0.525544 | 3.2:+72607819 | None:intergenic |
TGGAAATTACTTGATGAGCA+AGG | 0.526987 | 3.2:-72606916 | MS.gene77532:CDS |
TCTCACACTAGAGATTCAAA+AGG | 0.529312 | 3.2:-72606361 | MS.gene77532:CDS |
CGCCCCAGGTGGCGGCGTCG+AGG | 0.531283 | 3.2:+72607708 | None:intergenic |
TGCCCCAGCTATGACTTCCA+GGG | 0.531621 | 3.2:-72606439 | MS.gene77532:CDS |
TCAGGCTGACCCTTCTTAGG+TGG | 0.531885 | 3.2:+72607107 | None:intergenic |
TCTGGTGGACATTTGACTCA+TGG | 0.533259 | 3.2:-72607590 | MS.gene77532:CDS |
GACCCCTGGAAGTCATAGCT+GGG | 0.538130 | 3.2:+72606436 | None:intergenic |
TCATGATAGGATCATGGGAC+TGG | 0.541625 | 3.2:-72607621 | MS.gene77532:CDS |
CGCAGAAATCTTCTTCCCAC+CGG | 0.543795 | 3.2:+72607556 | None:intergenic |
GGAAATTACTTGATGAGCAA+GGG | 0.546759 | 3.2:-72606915 | MS.gene77532:CDS |
ATTCGTTTCCGCCGTAGTAA+CGG | 0.546990 | 3.2:+72607783 | None:intergenic |
AGTGTCTGAGCTCAAGTACA+AGG | 0.550201 | 3.2:-72606223 | MS.gene77532:CDS |
ACGATGTCACAGAACTCAAA+GGG | 0.551161 | 3.2:+72607200 | None:intergenic |
GGTCCTCACAACCACCAGAT+TGG | 0.554648 | 3.2:-72607023 | MS.gene77532:CDS |
CCTGACTCCTCCAGGTGCCA+AGG | 0.555521 | 3.2:+72606649 | None:intergenic |
CCGCCGTAGTAACGGTTACC+GGG | 0.555640 | 3.2:+72607791 | None:intergenic |
GTGAGGACCACCCTGAAGGG+AGG | 0.560471 | 3.2:+72607037 | None:intergenic |
GTAGAAGATCATACCAGCCC+TGG | 0.560560 | 3.2:+72607145 | None:intergenic |
AATCCTCATGATAGGATCAT+GGG | 0.561616 | 3.2:-72607626 | MS.gene77532:CDS |
GTCGTGGATTTCTGGGTCCA+CGG | 0.563391 | 3.2:+72607940 | None:intergenic |
GCACCTGGAGGAGTCAGGAT+TGG | 0.566548 | 3.2:-72606644 | MS.gene77532:intron |
CCAAAGTTGATTATTTGTGG+TGG | 0.566763 | 3.2:-72607437 | MS.gene77532:CDS |
TATTGATTATGATAGGTTGG+AGG | 0.566772 | 3.2:-72607480 | MS.gene77532:CDS |
TGAAACAGGCCACCACGCCT+GGG | 0.567620 | 3.2:-72606983 | MS.gene77532:CDS |
CACCTCGACGCCGCCACCTG+GGG | 0.576070 | 3.2:-72607710 | MS.gene77532:CDS |
TGAGGACCACCCTGAAGGGA+GGG | 0.581330 | 3.2:+72607038 | None:intergenic |
GGCTTCAATGACTGCGAAGG+AGG | 0.581885 | 3.2:+72607853 | None:intergenic |
GGCCTTGAACCCAGGCGTGG+TGG | 0.582420 | 3.2:+72606974 | None:intergenic |
GGGCTGGTATGATCTTCTAC+CGG | 0.582673 | 3.2:-72607142 | MS.gene77532:CDS |
TTCGCAGTCATTGAAGCCCT+AGG | 0.584856 | 3.2:-72607848 | MS.gene77532:CDS |
AGGTTGAACGTTGACGCCCC+AGG | 0.586750 | 3.2:+72607694 | None:intergenic |
TACTCTTGCAGGCAATAAGG+TGG | 0.588895 | 3.2:-72606735 | MS.gene77532:intron |
AAGCGGTGAGAGCGCGTGAG+CGG | 0.589839 | 3.2:+72607735 | None:intergenic |
TGTACTTGAGCTCAGACACT+AGG | 0.590369 | 3.2:+72606226 | None:intergenic |
TGGTATGATCTTCTACCGGA+AGG | 0.596236 | 3.2:-72607138 | MS.gene77532:CDS |
CCCAGGTGGCGGCGTCGAGG+TGG | 0.596640 | 3.2:+72607711 | None:intergenic |
GAGGACCACCCTGAAGGGAG+GGG | 0.597307 | 3.2:+72607039 | None:intergenic |
GACGATGTCACAGAACTCAA+AGG | 0.597789 | 3.2:+72607199 | None:intergenic |
ATTGAGAACGGCGGTGTAAG+CGG | 0.599009 | 3.2:+72607646 | None:intergenic |
TGAGAGTTACTGCACGGTGA+AGG | 0.602137 | 3.2:+72606379 | None:intergenic |
GGACTGGATCTACCTTCTGG+TGG | 0.603220 | 3.2:-72607605 | MS.gene77532:CDS |
GGCGGCGTCGAGGTGGAAAG+CGG | 0.604287 | 3.2:+72607718 | None:intergenic |
TAAGAGTTTAAGGGGTCCCA+GGG | 0.604324 | 3.2:-72607162 | MS.gene77532:CDS |
TAGAAGATCATACCAGCCCT+GGG | 0.606806 | 3.2:+72607146 | None:intergenic |
GCACCAATCTGGTGGTTGTG+AGG | 0.609752 | 3.2:+72607020 | None:intergenic |
GTTGTGAGGACCACCCTGAA+GGG | 0.610275 | 3.2:+72607034 | None:intergenic |
TCTGGGTCCACGGTAACTAA+CGG | 0.615620 | 3.2:+72607950 | None:intergenic |
TAGGGCTTCAATGACTGCGA+AGG | 0.618421 | 3.2:+72607850 | None:intergenic |
AAGGGATACAGTCTTGTCAC+CGG | 0.618890 | 3.2:-72606897 | MS.gene77532:CDS |
GCCCCAGCTATGACTTCCAG+GGG | 0.620989 | 3.2:-72606438 | MS.gene77532:CDS |
ACAACCCATAAGAGTTTAAG+GGG | 0.623565 | 3.2:-72607170 | MS.gene77532:CDS |
ATGGATCCAGTTAGTGAATG+GGG | 0.624625 | 3.2:-72607980 | MS.gene77532:CDS |
GTTTACCGGTCAAGCCAAGA+GGG | 0.625923 | 3.2:+72606838 | None:intergenic |
GGACCTAAGCCACCTAAGAA+GGG | 0.629365 | 3.2:-72607116 | MS.gene77532:CDS |
CATGGTTACTATACTTCCGG+TGG | 0.629951 | 3.2:-72607572 | MS.gene77532:CDS |
GGTATGATCTTCTACCGGAA+GGG | 0.631495 | 3.2:-72607137 | MS.gene77532:CDS |
ATAGGCCTTGAACCCAGGCG+TGG | 0.634867 | 3.2:+72606971 | None:intergenic |
TGTTCACAGTAATGTTACAG+AGG | 0.637542 | 3.2:+72606699 | None:intergenic |
TCAACCTTACTCCGGCTCAC+CGG | 0.640516 | 3.2:-72607678 | MS.gene77532:CDS |
TGAGTCAAATGTCCACCAGA+AGG | 0.641882 | 3.2:+72607593 | None:intergenic |
GGTTGTGAGGACCACCCTGA+AGG | 0.642881 | 3.2:+72607033 | None:intergenic |
ATGCCCGGTAACCGTTACTA+CGG | 0.643010 | 3.2:-72607794 | MS.gene77532:CDS |
CAGCAAGAGCACCAATCTGG+TGG | 0.647474 | 3.2:+72607012 | None:intergenic |
AAACACACCGTTAGTTACCG+TGG | 0.650031 | 3.2:-72607957 | MS.gene77532:CDS |
CTCACCAACAAATACTCCGA+AGG | 0.655624 | 3.2:-72607818 | MS.gene77532:CDS |
AGGCAATGAGTTCGATTCCG+CGG | 0.655674 | 3.2:+72607888 | None:intergenic |
CCTATCATGAGGATTGAGAA+CGG | 0.656550 | 3.2:+72607634 | None:intergenic |
CCCGGTAACCGTTACTACGG+CGG | 0.659362 | 3.2:-72607791 | MS.gene77532:CDS |
TACCGGTCAAGCCAAGAGGG+CGG | 0.661729 | 3.2:+72606841 | None:intergenic |
AGTTTACCGGTCAAGCCAAG+AGG | 0.668683 | 3.2:+72606837 | None:intergenic |
ATAATACCTGAGCAGCAACA+AGG | 0.680074 | 3.2:+72607318 | None:intergenic |
CTAGTGTGAGAGTTACTGCA+CGG | 0.681721 | 3.2:+72606373 | None:intergenic |
AGTCCCATGATCCTATCATG+AGG | 0.682957 | 3.2:+72607623 | None:intergenic |
ACCCCTGGAAGTCATAGCTG+GGG | 0.683408 | 3.2:+72606437 | None:intergenic |
GTCAACGTTCAACCTTACTC+CGG | 0.687651 | 3.2:-72607686 | MS.gene77532:CDS |
ATGGTTACTATACTTCCGGT+GGG | 0.689475 | 3.2:-72607571 | MS.gene77532:CDS |
AGTAGTGCCTTGGCACCTGG+AGG | 0.689991 | 3.2:-72606656 | MS.gene77532:CDS |
AGACAAGTTGCTGATAAGTG+TGG | 0.694051 | 3.2:-72607377 | MS.gene77532:CDS |
GGATACAGTCTTGTCACCGG+AGG | 0.711688 | 3.2:-72606894 | MS.gene77532:CDS |
GTATAAGGTGAATTCGACAA+CGG | 0.713988 | 3.2:-72607507 | MS.gene77532:CDS |
TTGAACGTTGACGCCCCAGG+TGG | 0.729642 | 3.2:+72607697 | None:intergenic |
ATCATGAGGATTGAGAACGG+CGG | 0.786132 | 3.2:+72607637 | None:intergenic |
ATAAGGTGAATTCGACAACG+GGG | 0.787931 | 3.2:-72607505 | MS.gene77532:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
! | ATCAAAACTTTGCATAAACA+AGG | + | chr3.2:72607673-72607692 | None:intergenic | 25.0% |
!! | GTTTATTGATTATGATAGGT+TGG | - | chr3.2:72606715-72606734 | MS.gene77532:CDS | 25.0% |
!! | TTACGAGTTTATTAGTTTAC+CGG | + | chr3.2:72607377-72607396 | None:intergenic | 25.0% |
AAAAAATGTTGCAATGTCGT+TGG | - | chr3.2:72607395-72607414 | MS.gene77532:CDS | 30.0% | |
AAAAATGTTGCAATGTCGTT+GGG | - | chr3.2:72607396-72607415 | MS.gene77532:CDS | 30.0% | |
AAATCATAAACTGCATTCTC+AGG | + | chr3.2:72607112-72607131 | None:intergenic | 30.0% | |
AACAACCCATAAGAGTTTAA+GGG | - | chr3.2:72607027-72607046 | MS.gene77532:CDS | 30.0% | |
CTAGAGATTCAAAAGGAATA+TGG | - | chr3.2:72607844-72607863 | MS.gene77532:CDS | 30.0% | |
TAAACAAGGACTTCCAATAT+TGG | + | chr3.2:72607659-72607678 | None:intergenic | 30.0% | |
TGAAAATCATCTTGTCTTGT+GGG | - | chr3.2:72607330-72607349 | MS.gene77532:CDS | 30.0% | |
TGGGTTTGATTGTTAAAGTT+GGG | - | chr3.2:72607415-72607434 | MS.gene77532:CDS | 30.0% | |
TTGGGTTTGATTGTTAAAGT+TGG | - | chr3.2:72607414-72607433 | MS.gene77532:CDS | 30.0% | |
! | AGACCAAAGTTGATTATTTG+TGG | - | chr3.2:72606758-72606777 | MS.gene77532:intron | 30.0% |
! | GGAATATGGTAAACTTTTGA+AGG | - | chr3.2:72607858-72607877 | MS.gene77532:CDS | 30.0% |
! | GGCGTTTTTCTTTTTCTATT+AGG | + | chr3.2:72606283-72606302 | None:intergenic | 30.0% |
! | TATTGATTATGATAGGTTGG+AGG | - | chr3.2:72606718-72606737 | MS.gene77532:CDS | 30.0% |
! | TTTCTTTTTCTATTAGGTCG+TGG | + | chr3.2:72606277-72606296 | None:intergenic | 30.0% |
!! | ACTTTTGAAGGATTTCAACA+AGG | - | chr3.2:72607870-72607889 | MS.gene77532:CDS | 30.0% |
!! | CTTTTGAAGGATTTCAACAA+GGG | - | chr3.2:72607871-72607890 | MS.gene77532:CDS | 30.0% |
!!! | CTTGAGTTAGTACTTTTTTG+TGG | - | chr3.2:72606957-72606976 | MS.gene77532:CDS | 30.0% |
!!! | TAGTACTTTTTTGTGGATAC+AGG | - | chr3.2:72606964-72606983 | MS.gene77532:CDS | 30.0% |
AAGTGCTTATCCTAGAGATT+GGG | - | chr3.2:72606784-72606803 | MS.gene77532:intron | 35.0% | |
AATCCTCATGATAGGATCAT+GGG | - | chr3.2:72606572-72606591 | MS.gene77532:intron | 35.0% | |
ACAACCCATAAGAGTTTAAG+GGG | - | chr3.2:72607028-72607047 | MS.gene77532:CDS | 35.0% | |
ACTCATGGTTACTATACTTC+CGG | - | chr3.2:72606623-72606642 | MS.gene77532:intron | 35.0% | |
ACTTCTCAACATCAGCTTTA+AGG | + | chr3.2:72607924-72607943 | None:intergenic | 35.0% | |
CAACAACCCATAAGAGTTTA+AGG | - | chr3.2:72607026-72607045 | MS.gene77532:CDS | 35.0% | |
CCACCACAAATAATCAACTT+TGG | + | chr3.2:72606764-72606783 | None:intergenic | 35.0% | |
CTGAAAATCATCTTGTCTTG+TGG | - | chr3.2:72607329-72607348 | MS.gene77532:CDS | 35.0% | |
GGAAATTACTTGATGAGCAA+GGG | - | chr3.2:72607283-72607302 | MS.gene77532:intron | 35.0% | |
GTATAAGGTGAATTCGACAA+CGG | - | chr3.2:72606691-72606710 | MS.gene77532:CDS | 35.0% | |
GTTGTCGAATTCACCTTATA+CGG | + | chr3.2:72606692-72606711 | None:intergenic | 35.0% | |
TATAAGGTGAATTCGACAAC+GGG | - | chr3.2:72606692-72606711 | MS.gene77532:CDS | 35.0% | |
TATCCTAGAGATTGGGATTA+TGG | - | chr3.2:72606791-72606810 | MS.gene77532:intron | 35.0% | |
TCTCACACTAGAGATTCAAA+AGG | - | chr3.2:72607837-72607856 | MS.gene77532:CDS | 35.0% | |
TGGAAATTACTTGATGAGCA+AGG | - | chr3.2:72607282-72607301 | MS.gene77532:intron | 35.0% | |
TGTGATATGGCTCATATTAG+TGG | - | chr3.2:72606857-72606876 | MS.gene77532:CDS | 35.0% | |
TGTTCACAGTAATGTTACAG+AGG | + | chr3.2:72607502-72607521 | None:intergenic | 35.0% | |
! | AAGATGATTTTCAGTTCCTC+CGG | + | chr3.2:72607323-72607342 | None:intergenic | 35.0% |
! | CCAAAGTTGATTATTTGTGG+TGG | - | chr3.2:72606761-72606780 | MS.gene77532:intron | 35.0% |
! | CGGGGTTTATTGATTATGAT+AGG | - | chr3.2:72606711-72606730 | MS.gene77532:CDS | 35.0% |
! | CTTTGAGAGTTTACCGTATA+AGG | - | chr3.2:72606676-72606695 | MS.gene77532:CDS | 35.0% |
! | TGCTCTTTTGCTTTGTGATA+TGG | - | chr3.2:72606844-72606863 | MS.gene77532:CDS | 35.0% |
! | TGTATTTTCCATACTCTTGC+AGG | - | chr3.2:72607452-72607471 | MS.gene77532:CDS | 35.0% |
!!! | GTGAACAAGAATGCTGTTTT+TGG | - | chr3.2:72607515-72607534 | MS.gene77532:CDS | 35.0% |
ACGATGTCACAGAACTCAAA+GGG | + | chr3.2:72607001-72607020 | None:intergenic | 40.0% | |
AGACAAGTTGCTGATAAGTG+TGG | - | chr3.2:72606821-72606840 | MS.gene77532:intron | 40.0% | |
ATAAGGTGAATTCGACAACG+GGG | - | chr3.2:72606693-72606712 | MS.gene77532:CDS | 40.0% | |
ATAATACCTGAGCAGCAACA+AGG | + | chr3.2:72606883-72606902 | None:intergenic | 40.0% | |
ATGGATCCAGTTAGTGAATG+GGG | - | chr3.2:72606218-72606237 | MS.gene77532:CDS | 40.0% | |
ATGGTTACTATACTTCCGGT+GGG | - | chr3.2:72606627-72606646 | MS.gene77532:intron | 40.0% | |
ATTTCCAAGTGCAACTGCAT+TGG | + | chr3.2:72607269-72607288 | None:intergenic | 40.0% | |
CAATCCTCATGATAGGATCA+TGG | - | chr3.2:72606571-72606590 | MS.gene77532:intron | 40.0% | |
CCTATCATGAGGATTGAGAA+CGG | + | chr3.2:72606567-72606586 | None:intergenic | 40.0% | |
CTAGAGATTGGGATTATGGA+AGG | - | chr3.2:72606795-72606814 | MS.gene77532:intron | 40.0% | |
CTATTAGGTCGTGGATTTCT+GGG | + | chr3.2:72606268-72606287 | None:intergenic | 40.0% | |
CTTCCATAATCCCAATCTCT+AGG | + | chr3.2:72606797-72606816 | None:intergenic | 40.0% | |
TCAGCATCATTTGATATGCC+TGG | - | chr3.2:72607946-72607965 | MS.gene77532:CDS | 40.0% | |
TCTATTAGGTCGTGGATTTC+TGG | + | chr3.2:72606269-72606288 | None:intergenic | 40.0% | |
TGACATGAGCTTCTGTTAAC+AGG | - | chr3.2:72607736-72607755 | MS.gene77532:CDS | 40.0% | |
TGTCACCAGAAAGCCAATAT+TGG | - | chr3.2:72607643-72607662 | MS.gene77532:CDS | 40.0% | |
TTGTTGCTGCTCAGGTATTA+TGG | - | chr3.2:72606882-72606901 | MS.gene77532:CDS | 40.0% | |
! | GAAGGAGGTGAAATTTTCTG+AGG | + | chr3.2:72606333-72606352 | None:intergenic | 40.0% |
! | GAAGTGCTTATCCTAGAGAT+TGG | - | chr3.2:72606783-72606802 | MS.gene77532:intron | 40.0% |
! | TTCGGAGTATTTGTTGGTGA+GGG | + | chr3.2:72606381-72606400 | None:intergenic | 40.0% |
!! | GACTTCCAATATTGGCTTTC+TGG | + | chr3.2:72607651-72607670 | None:intergenic | 40.0% |
!! | TCTTGCTGTTGCTTTGAAAC+AGG | - | chr3.2:72607201-72607220 | MS.gene77532:CDS | 40.0% |
!! | TTTTGGTGATAGTAGTGCCT+TGG | - | chr3.2:72607532-72607551 | MS.gene77532:CDS | 40.0% |
AAACACACCGTTAGTTACCG+TGG | - | chr3.2:72606241-72606260 | MS.gene77532:CDS | 45.0% | |
AGTCCCATGATCCTATCATG+AGG | + | chr3.2:72606578-72606597 | None:intergenic | 45.0% | |
AGTGTCTGAGCTCAAGTACA+AGG | - | chr3.2:72607975-72607994 | MS.gene77532:CDS | 45.0% | |
ATAAGAGTTTAAGGGGTCCC+AGG | - | chr3.2:72607035-72607054 | MS.gene77532:CDS | 45.0% | |
ATCATGAGGATTGAGAACGG+CGG | + | chr3.2:72606564-72606583 | None:intergenic | 45.0% | |
ATTCGTTTCCGCCGTAGTAA+CGG | + | chr3.2:72606418-72606437 | None:intergenic | 45.0% | |
CATGGTTACTATACTTCCGG+TGG | - | chr3.2:72606626-72606645 | MS.gene77532:intron | 45.0% | |
CCATACTCTTGCAGGCAATA+AGG | - | chr3.2:72607460-72607479 | MS.gene77532:CDS | 45.0% | |
CCGTTCTCAATCCTCATGAT+AGG | - | chr3.2:72606564-72606583 | MS.gene77532:intron | 45.0% | |
CCTTATTGCCTGCAAGAGTA+TGG | + | chr3.2:72607463-72607482 | None:intergenic | 45.0% | |
CTAGTGTGAGAGTTACTGCA+CGG | + | chr3.2:72607828-72607847 | None:intergenic | 45.0% | |
CTCACCAACAAATACTCCGA+AGG | - | chr3.2:72606380-72606399 | MS.gene77532:CDS | 45.0% | |
GACGATGTCACAGAACTCAA+AGG | + | chr3.2:72607002-72607021 | None:intergenic | 45.0% | |
GGGACCCCTTAAACTCTTAT+GGG | + | chr3.2:72607035-72607054 | None:intergenic | 45.0% | |
GGTATGATCTTCTACCGGAA+GGG | - | chr3.2:72607061-72607080 | MS.gene77532:CDS | 45.0% | |
GTCAACGTTCAACCTTACTC+CGG | - | chr3.2:72606512-72606531 | MS.gene77532:intron | 45.0% | |
GTGTTTCCCCATTCACTAAC+TGG | + | chr3.2:72606227-72606246 | None:intergenic | 45.0% | |
TAAGAGTTTAAGGGGTCCCA+GGG | - | chr3.2:72607036-72607055 | MS.gene77532:CDS | 45.0% | |
TACTCTTGCAGGCAATAAGG+TGG | - | chr3.2:72607463-72607482 | MS.gene77532:CDS | 45.0% | |
TAGAAGATCATACCAGCCCT+GGG | + | chr3.2:72607055-72607074 | None:intergenic | 45.0% | |
TCATGATAGGATCATGGGAC+TGG | - | chr3.2:72606577-72606596 | MS.gene77532:intron | 45.0% | |
TGAGTCAAATGTCCACCAGA+AGG | + | chr3.2:72606608-72606627 | None:intergenic | 45.0% | |
TGGGACCCCTTAAACTCTTA+TGG | + | chr3.2:72607036-72607055 | None:intergenic | 45.0% | |
TGGTATGATCTTCTACCGGA+AGG | - | chr3.2:72607060-72607079 | MS.gene77532:CDS | 45.0% | |
TGTACTTGAGCTCAGACACT+AGG | + | chr3.2:72607975-72607994 | None:intergenic | 45.0% | |
! | AAGGGATACAGTCTTGTCAC+CGG | - | chr3.2:72607301-72607320 | MS.gene77532:intron | 45.0% |
! | AGCGGCAAATGTTTTCGATC+TGG | + | chr3.2:72606448-72606467 | None:intergenic | 45.0% |
! | CATGCCTTCGGAGTATTTGT+TGG | + | chr3.2:72606387-72606406 | None:intergenic | 45.0% |
! | CTTCGGAGTATTTGTTGGTG+AGG | + | chr3.2:72606382-72606401 | None:intergenic | 45.0% |
! | TAGGTTGGAGGAGAAAGCTT+TGG | - | chr3.2:72606730-72606749 | MS.gene77532:intron | 45.0% |
! | TCTGGTGGACATTTGACTCA+TGG | - | chr3.2:72606608-72606627 | MS.gene77532:intron | 45.0% |
!! | TGCATTGGCCTTAACTTGCT+TGG | + | chr3.2:72607254-72607273 | None:intergenic | 45.0% |
AAGGCCAATGCAGTTGCACT+TGG | - | chr3.2:72607262-72607281 | MS.gene77532:intron | 50.0% | |
AGCTCAGACACTAGGAATCC+AGG | + | chr3.2:72607967-72607986 | None:intergenic | 50.0% | |
AGGCAATGAGTTCGATTCCG+CGG | + | chr3.2:72606313-72606332 | None:intergenic | 50.0% | |
AGTTTACCGGTCAAGCCAAG+AGG | + | chr3.2:72607364-72607383 | None:intergenic | 50.0% | |
ATGCCCGGTAACCGTTACTA+CGG | - | chr3.2:72606404-72606423 | MS.gene77532:CDS | 50.0% | |
ATGGGACTGGATCTACCTTC+TGG | - | chr3.2:72606590-72606609 | MS.gene77532:intron | 50.0% | |
ATTGAGAACGGCGGTGTAAG+CGG | + | chr3.2:72606555-72606574 | None:intergenic | 50.0% | |
CGCAGAAATCTTCTTCCCAC+CGG | + | chr3.2:72606645-72606664 | None:intergenic | 50.0% | |
GGACCTAAGCCACCTAAGAA+GGG | - | chr3.2:72607082-72607101 | MS.gene77532:CDS | 50.0% | |
GGCCTATGCCAAGCAAGTTA+AGG | - | chr3.2:72607243-72607262 | MS.gene77532:intron | 50.0% | |
GTAGAAGATCATACCAGCCC+TGG | + | chr3.2:72607056-72607075 | None:intergenic | 50.0% | |
GTTTACCGGTCAAGCCAAGA+GGG | + | chr3.2:72607363-72607382 | None:intergenic | 50.0% | |
TAGGGCTTCAATGACTGCGA+AGG | + | chr3.2:72606351-72606370 | None:intergenic | 50.0% | |
TCTGGGTCCACGGTAACTAA+CGG | + | chr3.2:72606251-72606270 | None:intergenic | 50.0% | |
TGACCCTTCTTAGGTGGCTT+AGG | + | chr3.2:72607088-72607107 | None:intergenic | 50.0% | |
TGAGAGTTACTGCACGGTGA+AGG | + | chr3.2:72607822-72607841 | None:intergenic | 50.0% | |
TTACCAATCCTGACTCCTCC+AGG | + | chr3.2:72607560-72607579 | None:intergenic | 50.0% | |
TTCGCAGTCATTGAAGCCCT+AGG | - | chr3.2:72606350-72606369 | MS.gene77532:CDS | 50.0% | |
TTCTCAGGCTGACCCTTCTT+AGG | + | chr3.2:72607097-72607116 | None:intergenic | 50.0% | |
! | AAATACTCCGAAGGCATGCC+CGG | - | chr3.2:72606389-72606408 | MS.gene77532:CDS | 50.0% |
! | GGGCTGGTATGATCTTCTAC+CGG | - | chr3.2:72607056-72607075 | MS.gene77532:CDS | 50.0% |
!! | CAACAGCAAGAGCACCAATC+TGG | + | chr3.2:72607192-72607211 | None:intergenic | 50.0% |
!! | GGCCTTAACTTGCTTGGCAT+AGG | + | chr3.2:72607248-72607267 | None:intergenic | 50.0% |
ACCCCTGGAAGTCATAGCTG+GGG | + | chr3.2:72607764-72607783 | None:intergenic | 55.0% | |
AGACCCCTGGAAGTCATAGC+TGG | + | chr3.2:72607766-72607785 | None:intergenic | 55.0% | |
AGCTATGACTTCCAGGGGTC+TGG | - | chr3.2:72607765-72607784 | MS.gene77532:CDS | 55.0% | |
GAAAAACGCCGTCAATGCCG+CGG | - | chr3.2:72606293-72606312 | MS.gene77532:CDS | 55.0% | |
GACCCCTGGAAGTCATAGCT+GGG | + | chr3.2:72607765-72607784 | None:intergenic | 55.0% | |
GATAGTAGTGCCTTGGCACC+TGG | - | chr3.2:72607539-72607558 | MS.gene77532:CDS | 55.0% | |
GCACCAATCTGGTGGTTGTG+AGG | + | chr3.2:72607181-72607200 | None:intergenic | 55.0% | |
GGACTGGATCTACCTTCTGG+TGG | - | chr3.2:72606593-72606612 | MS.gene77532:intron | 55.0% | |
GGCTTCAATGACTGCGAAGG+AGG | + | chr3.2:72606348-72606367 | None:intergenic | 55.0% | |
GGGACCTAAGCCACCTAAGA+AGG | - | chr3.2:72607081-72607100 | MS.gene77532:CDS | 55.0% | |
GGTCCTCACAACCACCAGAT+TGG | - | chr3.2:72607175-72607194 | MS.gene77532:CDS | 55.0% | |
GTGTAAGCGGCGAAATTCGC+CGG | + | chr3.2:72606542-72606561 | None:intergenic | 55.0% | |
GTTGTGAGGACCACCCTGAA+GGG | + | chr3.2:72607167-72607186 | None:intergenic | 55.0% | |
TAGGTGGCTTAGGTCCCTTC+CGG | + | chr3.2:72607078-72607097 | None:intergenic | 55.0% | |
TCAACCTTACTCCGGCTCAC+CGG | - | chr3.2:72606520-72606539 | MS.gene77532:intron | 55.0% | |
TCAGGCTGACCCTTCTTAGG+TGG | + | chr3.2:72607094-72607113 | None:intergenic | 55.0% | |
TCCGCCGTAGTAACGGTTAC+CGG | + | chr3.2:72606411-72606430 | None:intergenic | 55.0% | |
TGCCCCAGCTATGACTTCCA+GGG | - | chr3.2:72607759-72607778 | MS.gene77532:CDS | 55.0% | |
TTCCAGGGGTCTGGTTGAGA+AGG | - | chr3.2:72607774-72607793 | MS.gene77532:CDS | 55.0% | |
TTGGCATAGGCCTTGAACCC+AGG | + | chr3.2:72607235-72607254 | None:intergenic | 55.0% | |
! | GGATACAGTCTTGTCACCGG+AGG | - | chr3.2:72607304-72607323 | MS.gene77532:intron | 55.0% |
! | GTCGTGGATTTCTGGGTCCA+CGG | + | chr3.2:72606261-72606280 | None:intergenic | 55.0% |
! | GTTCGATTCCGCGGCATTGA+CGG | + | chr3.2:72606304-72606323 | None:intergenic | 55.0% |
!! | CAGCAAGAGCACCAATCTGG+TGG | + | chr3.2:72607189-72607208 | None:intergenic | 55.0% |
!! | GCTGTTTTCCCCTCCCTTCA+GGG | - | chr3.2:72607151-72607170 | MS.gene77532:CDS | 55.0% |
!! | TAGTGGCCTTGTTGCTGCTC+AGG | - | chr3.2:72606874-72606893 | MS.gene77532:CDS | 55.0% |
!!! | TGCTGTTTTCCCCTCCCTTC+AGG | - | chr3.2:72607150-72607169 | MS.gene77532:CDS | 55.0% |
ACGGTTACCGGGCATGCCTT+CGG | + | chr3.2:72606399-72606418 | None:intergenic | 60.0% | |
AGGTTGAACGTTGACGCCCC+AGG | + | chr3.2:72606507-72606526 | None:intergenic | 60.0% | |
AGTAGTGCCTTGGCACCTGG+AGG | - | chr3.2:72607542-72607561 | MS.gene77532:CDS | 60.0% | |
AGTTTAAGGGGTCCCAGGGC+TGG | - | chr3.2:72607040-72607059 | MS.gene77532:CDS | 60.0% | |
ATAGGCCTTGAACCCAGGCG+TGG | + | chr3.2:72607230-72607249 | None:intergenic | 60.0% | |
CCCGGTAACCGTTACTACGG+CGG | - | chr3.2:72606407-72606426 | MS.gene77532:CDS | 60.0% | |
CCGCCGTAGTAACGGTTACC+GGG | + | chr3.2:72606410-72606429 | None:intergenic | 60.0% | |
GCACCTGGAGGAGTCAGGAT+TGG | - | chr3.2:72607554-72607573 | MS.gene77532:CDS | 60.0% | |
GCCCCAGCTATGACTTCCAG+GGG | - | chr3.2:72607760-72607779 | MS.gene77532:CDS | 60.0% | |
GGTTGTGAGGACCACCCTGA+AGG | + | chr3.2:72607168-72607187 | None:intergenic | 60.0% | |
GTCCTTCTCAACCAGACCCC+TGG | + | chr3.2:72607779-72607798 | None:intergenic | 60.0% | |
GTGCCCCAGCTATGACTTCC+AGG | - | chr3.2:72607758-72607777 | MS.gene77532:CDS | 60.0% | |
TACCGGTCAAGCCAAGAGGG+CGG | + | chr3.2:72607360-72607379 | None:intergenic | 60.0% | |
TGAAACAGGCCACCACGCCT+GGG | - | chr3.2:72607215-72607234 | MS.gene77532:CDS | 60.0% | |
TGAGGACCACCCTGAAGGGA+GGG | + | chr3.2:72607163-72607182 | None:intergenic | 60.0% | |
TTGAAACAGGCCACCACGCC+TGG | - | chr3.2:72607214-72607233 | MS.gene77532:CDS | 60.0% | |
TTGAACGTTGACGCCCCAGG+TGG | + | chr3.2:72606504-72606523 | None:intergenic | 60.0% | |
TTGTGGGATCTCCGCCCTCT+TGG | - | chr3.2:72607346-72607365 | MS.gene77532:CDS | 60.0% | |
! | GTTTTCCCCTCCCTTCAGGG+TGG | - | chr3.2:72607154-72607173 | MS.gene77532:CDS | 60.0% |
!! | GTTGGTGAGGGCGCTTCCTA+GGG | + | chr3.2:72606369-72606388 | None:intergenic | 60.0% |
!! | TGTTGGTGAGGGCGCTTCCT+AGG | + | chr3.2:72606370-72606389 | None:intergenic | 60.0% |
AACGTTGACGCCCCAGGTGG+CGG | + | chr3.2:72606501-72606520 | None:intergenic | 65.0% | |
CCTGACTCCTCCAGGTGCCA+AGG | + | chr3.2:72607552-72607571 | None:intergenic | 65.0% | |
CCTTGGCACCTGGAGGAGTC+AGG | - | chr3.2:72607549-72607568 | MS.gene77532:CDS | 65.0% | |
GAGGACCACCCTGAAGGGAG+GGG | + | chr3.2:72607162-72607181 | None:intergenic | 65.0% | |
GGCGAAATTCGCCGGTGAGC+CGG | + | chr3.2:72606534-72606553 | None:intergenic | 65.0% | |
GTGAGGACCACCCTGAAGGG+AGG | + | chr3.2:72607164-72607183 | None:intergenic | 65.0% | |
TTCGCCGGTGAGCCGGAGTA+AGG | + | chr3.2:72606527-72606546 | None:intergenic | 65.0% | |
! | AAGCGGTGAGAGCGCGTGAG+CGG | + | chr3.2:72606466-72606485 | None:intergenic | 65.0% |
! | CTCCGCCCTCTTGGCTTGAC+CGG | - | chr3.2:72607355-72607374 | MS.gene77532:CDS | 65.0% |
GGCCACCACGCCTGGGTTCA+AGG | - | chr3.2:72607222-72607241 | MS.gene77532:intron | 70.0% | |
GGCCTTGAACCCAGGCGTGG+TGG | + | chr3.2:72607227-72607246 | None:intergenic | 70.0% | |
! | GGCGGCGTCGAGGTGGAAAG+CGG | + | chr3.2:72606483-72606502 | None:intergenic | 70.0% |
CACCTCGACGCCGCCACCTG+GGG | - | chr3.2:72606488-72606507 | MS.gene77532:intron | 75.0% | |
CCACCTCGACGCCGCCACCT+GGG | - | chr3.2:72606487-72606506 | MS.gene77532:intron | 75.0% | |
TCCACCTCGACGCCGCCACC+TGG | - | chr3.2:72606486-72606505 | MS.gene77532:intron | 75.0% | |
!! | CCCAGGTGGCGGCGTCGAGG+TGG | + | chr3.2:72606490-72606509 | None:intergenic | 80.0% |
!! | CGCCCCAGGTGGCGGCGTCG+AGG | + | chr3.2:72606493-72606512 | None:intergenic | 85.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.2 | gene | 72606218 | 72608002 | 72606218 | ID=MS.gene77532 |
chr3.2 | mRNA | 72606218 | 72608002 | 72606218 | ID=MS.gene77532.t1;Parent=MS.gene77532 |
chr3.2 | exon | 72607325 | 72608002 | 72607325 | ID=MS.gene77532.t1.exon1;Parent=MS.gene77532.t1 |
chr3.2 | CDS | 72607325 | 72608002 | 72607325 | ID=cds.MS.gene77532.t1;Parent=MS.gene77532.t1 |
chr3.2 | exon | 72606844 | 72607234 | 72606844 | ID=MS.gene77532.t1.exon2;Parent=MS.gene77532.t1 |
chr3.2 | CDS | 72606844 | 72607234 | 72606844 | ID=cds.MS.gene77532.t1;Parent=MS.gene77532.t1 |
chr3.2 | exon | 72606645 | 72606746 | 72606645 | ID=MS.gene77532.t1.exon3;Parent=MS.gene77532.t1 |
chr3.2 | CDS | 72606645 | 72606746 | 72606645 | ID=cds.MS.gene77532.t1;Parent=MS.gene77532.t1 |
chr3.2 | exon | 72606218 | 72606462 | 72606218 | ID=MS.gene77532.t1.exon4;Parent=MS.gene77532.t1 |
chr3.2 | CDS | 72606218 | 72606462 | 72606218 | ID=cds.MS.gene77532.t1;Parent=MS.gene77532.t1 |
Gene Sequence |
Protein sequence |